locus-tag class description C2844_RS00005 PF01029 NusB family C2844_RS00010 PF00885 6,7-dimethyl-8-ribityllumazine synthase C2844_RS00015 PF00793 DAHP synthetase I family C2844_RS00020 PF00484 Carbonic anhydrase C2844_RS00025 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family C2844_RS00030 PF02569 Pantoate-beta-alanine ligase C2844_RS00065 PF00118 TCP-1/cpn60 chaperonin family C2844_RS00070 PF00166 Chaperonin 10 Kd subunit C2844_RS00080 PF16730 DnaG-primase C-terminal, helicase-binding domain C2844_RS00080 PF13662 Toprim domain C2844_RS00080 PF08275 DNA primase catalytic core, N-terminal domain C2844_RS00080 PF01807 CHC2 zinc finger C2844_RS00120 PF01584 CheW-like domain C2844_RS00120 PF00072 Response regulator receiver domain C2844_RS00125 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain C2844_RS00130 PF01569 PAP2 superfamily C2844_RS00135 PF00884 Sulfatase C2844_RS00135 PF08019 Phosphoethanolamine transferase EptA/EptB C2844_RS00155 PF00285 Citrate synthase, C-terminal domain C2844_RS00160 PF00180 Isocitrate/isopropylmalate dehydrogenase C2844_RS00165 PF07509 Protein of unknown function (DUF1523) C2844_RS00180 PF00582 Universal stress protein family C2844_RS00185 PF02617 ATP-dependent Clp protease adaptor protein ClpS C2844_RS00190 PF02861 Clp amino terminal domain, pathogenicity island component C2844_RS00190 PF00004 ATPase family associated with various cellular activities (AAA) C2844_RS00190 PF10431 C-terminal, D2-small domain, of ClpB protein C2844_RS00190 PF07724 AAA domain (Cdc48 subfamily) C2844_RS00190 PF17871 AAA lid domain C2844_RS00195 PF02261 Aspartate decarboxylase C2844_RS00200 PF02575 YbaB/EbfC DNA-binding family C2844_RS00235 PF00483 Nucleotidyl transferase C2844_RS00235 PF01050 Mannose-6-phosphate isomerase C2844_RS00240 PF16363 GDP-mannose 4,6 dehydratase C2844_RS00245 PF01370 NAD dependent epimerase/dehydratase family C2844_RS00255 PF00586 AIR synthase related protein, N-terminal domain C2844_RS00255 PF02769 AIR synthase related protein, C-terminal domain C2844_RS00260 PF01300 Telomere recombination C2844_RS00260 PF07503 HypF finger C2844_RS00260 PF00708 Acylphosphatase C2844_RS00260 PF17788 HypF Kae1-like domain C2844_RS00265 PF04371 Porphyromonas-type peptidyl-arginine deiminase C2844_RS00270 PF01555 DNA methylase C2844_RS00275 PF00145 C-5 cytosine-specific DNA methylase C2844_RS00275 PF01381 Helix-turn-helix C2844_RS00290 PF00145 C-5 cytosine-specific DNA methylase C2844_RS00295 PF00474 Sodium:solute symporter family C2844_RS00300 PF18327 Proline utilization A proline dehydrogenase N-terminal domain C2844_RS00300 PF14850 DNA-binding domain of Proline dehydrogenase C2844_RS00300 PF01619 Proline dehydrogenase C2844_RS00300 PF00171 Aldehyde dehydrogenase family C2844_RS00355 PF01774 UreD urease accessory protein C2844_RS00360 PF02492 CobW/HypB/UreG, nucleotide-binding domain C2844_RS00365 PF01730 UreF C2844_RS00370 PF05194 UreE urease accessory protein, C-terminal domain C2844_RS00370 PF02814 UreE urease accessory protein, N-terminal domain C2844_RS00375 PF02293 AmiS/UreI family transporter C2844_RS00380 PF01979 Amidohydrolase family C2844_RS00380 PF00449 Urease alpha-subunit, N-terminal domain C2844_RS00385 PF00699 Urease beta subunit C2844_RS00385 PF00547 Urease, gamma subunit C2844_RS00395 PF01252 Signal peptidase (SPase) II C2844_RS00400 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I C2844_RS00400 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II C2844_RS00400 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain C2844_RS00400 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III C2844_RS00405 PF01649 Ribosomal protein S20 C2844_RS00410 PF03462 PCRF domain C2844_RS00410 PF00472 RF-1 domain C2844_RS00435 PF17200 Single Cache domain 2 C2844_RS00435 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2844_RS00435 PF00672 HAMP domain C2844_RS00440 PF00380 Ribosomal protein S9/S16 C2844_RS00445 PF00572 Ribosomal protein L13 C2844_RS00450 PF17402 Family of unknown function (DUF5408) C2844_RS00455 PF06039 Malate:quinone oxidoreductase (Mqo) C2844_RS00465 PF04542 Sigma-70 region 2 C2844_RS00465 PF04545 Sigma-70, region 4 C2844_RS00465 PF00140 Sigma-70 factor, region 1.2 C2844_RS00465 PF04539 Sigma-70 region 3 C2844_RS00470 PF01048 Phosphorylase superfamily C2844_RS00475 PF00698 Acyl transferase domain C2844_RS00485 PF04556 DpnII restriction endonuclease C2844_RS00490 PF01555 DNA methylase C2844_RS00495 PF01531 Glycosyl transferase family 11 C2844_RS00510 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C2844_RS00510 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C2844_RS00520 PF00291 Pyridoxal-phosphate dependent enzyme C2844_RS00525 PF00672 HAMP domain C2844_RS00525 PF16591 Helical bimodular sensor domain C2844_RS00525 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2844_RS00530 PF02677 Epoxyqueuosine reductase QueH C2844_RS00540 PF00535 Glycosyl transferase family 2 C2844_RS00545 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2844_RS00545 PF00672 HAMP domain C2844_RS00545 PF17200 Single Cache domain 2 C2844_RS00555 PF02872 5'-nucleotidase, C-terminal domain C2844_RS00555 PF00149 Calcineurin-like phosphoesterase C2844_RS00560 PF02664 S-Ribosylhomocysteinase (LuxS) C2844_RS00565 PF01053 Cys/Met metabolism PLP-dependent enzyme C2844_RS00570 PF00291 Pyridoxal-phosphate dependent enzyme C2844_RS00580 PF00012 Hsp70 protein C2844_RS00585 PF01025 GrpE C2844_RS00610 PF07196 Flagellin hook IN motif C2844_RS00610 PF00669 Bacterial flagellin N-terminal helical region C2844_RS00610 PF00700 Bacterial flagellin C-terminal helical region C2844_RS00615 PF01396 Topoisomerase DNA binding C4 zinc finger C2844_RS00615 PF01751 Toprim domain C2844_RS00615 PF01131 DNA topoisomerase C2844_RS00620 PF04055 Radical SAM superfamily C2844_RS00640 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain C2844_RS00640 PF02896 PEP-utilising enzyme, TIM barrel domain C2844_RS00640 PF00391 PEP-utilising enzyme, mobile domain C2844_RS00650 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C2844_RS00650 PF03129 Anticodon binding domain C2844_RS00650 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain C2844_RS00655 PF05198 Translation initiation factor IF-3, N-terminal domain C2844_RS00655 PF00707 Translation initiation factor IF-3, C-terminal domain C2844_RS00660 PF01632 Ribosomal protein L35 C2844_RS00665 PF00453 Ribosomal protein L20 C2844_RS00705 PF03315 Serine dehydratase beta chain C2844_RS00705 PF03313 Serine dehydratase alpha chain C2844_RS00710 PF03222 Tryptophan/tyrosine permease family C2844_RS00715 PF01474 Class-II DAHP synthetase family C2844_RS00725 PF00578 AhpC/TSA family C2844_RS00730 PF02589 LUD domain C2844_RS00735 PF11870 Domain of unknown function (DUF3390) C2844_RS00735 PF13183 4Fe-4S dicluster domain C2844_RS00735 PF02589 LUD domain C2844_RS00740 PF02754 Cysteine-rich domain C2844_RS00745 PF02652 L-lactate permease C2844_RS00750 PF02652 L-lactate permease C2844_RS00755 PF14815 NUDIX domain C2844_RS00755 PF00633 Helix-hairpin-helix motif C2844_RS00755 PF00730 HhH-GPD superfamily base excision DNA repair protein C2844_RS00765 PF00115 Cytochrome C and Quinol oxidase polypeptide I C2844_RS00780 PF13442 Cytochrome C oxidase, cbb3-type, subunit III C2844_RS00780 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP C2844_RS00810 PF00154 recA bacterial DNA recombination protein C2844_RS00815 PF00113 Enolase, C-terminal TIM barrel domain C2844_RS00815 PF03952 Enolase, N-terminal domain C2844_RS00830 PF01202 Shikimate kinase C2844_RS00845 PF08238 Sel1 repeat C2844_RS00850 PF01709 Transcriptional regulator C2844_RS00855 PF00490 Delta-aminolevulinic acid dehydratase C2844_RS00865 PF00072 Response regulator receiver domain C2844_RS00865 PF00486 Transcriptional regulatory protein, C terminal C2844_RS00880 PF01136 Peptidase family U32 C2844_RS00890 PF00472 RF-1 domain C2844_RS00890 PF03462 PCRF domain C2844_RS00895 PF03453 MoeA N-terminal region (domain I and II) C2844_RS00895 PF03454 MoeA C-terminal region (domain IV) C2844_RS00895 PF00994 Probable molybdopterin binding domain C2844_RS00915 PF00639 PPIC-type PPIASE domain C2844_RS00920 PF01116 Fructose-bisphosphate aldolase class-II C2844_RS00925 PF09285 Elongation factor P, C-terminal C2844_RS00925 PF01132 Elongation factor P (EF-P) OB domain C2844_RS00925 PF08207 Elongation factor P (EF-P) KOW-like domain C2844_RS00930 PF03102 NeuB family C2844_RS00930 PF08666 SAF domain C2844_RS00935 PF00005 ABC transporter C2844_RS00940 PF00795 Carbon-nitrogen hydrolase C2844_RS00950 PF00152 tRNA synthetases class II (D, K and N) C2844_RS00950 PF01336 OB-fold nucleic acid binding domain C2844_RS00955 PF00464 Serine hydroxymethyltransferase C2844_RS00980 PF03350 Uncharacterized protein family, UPF0114 C2844_RS00985 PF13091 PLD-like domain C2844_RS00990 PF13085 2Fe-2S iron-sulfur cluster binding domain C2844_RS00990 PF13183 4Fe-4S dicluster domain C2844_RS00995 PF00890 FAD binding domain C2844_RS00995 PF02910 Fumarate reductase flavoprotein C-term C2844_RS01000 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit C2844_RS01005 PF00121 Triosephosphate isomerase C2844_RS01015 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD C2844_RS01015 PF00132 Bacterial transferase hexapeptide (six repeats) C2844_RS01020 PF02773 S-adenosylmethionine synthetase, C-terminal domain C2844_RS01020 PF02772 S-adenosylmethionine synthetase, central domain C2844_RS01020 PF00438 S-adenosylmethionine synthetase, N-terminal domain C2844_RS01025 PF00334 Nucleoside diphosphate kinase C2844_RS01035 PF01783 Ribosomal L32p protein family C2844_RS01040 PF02504 Fatty acid synthesis protein C2844_RS01045 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal C2844_RS01045 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C2844_RS01075 PF10609 NUBPL iron-transfer P-loop NTPase C2844_RS01075 PF01883 Iron-sulfur cluster assembly protein C2844_RS01090 PF00183 Hsp90 protein C2844_RS01095 PF08238 Sel1 repeat C2844_RS01095 PF13181 Tetratricopeptide repeat C2844_RS01100 PF01546 Peptidase family M20/M25/M40 C2844_RS01100 PF07687 Peptidase dimerisation domain C2844_RS01105 PF01134 Glucose inhibited division protein A C2844_RS01105 PF13932 GidA associated domain C2844_RS01110 PF00939 Sodium:sulfate symporter transmembrane region C2844_RS01120 PF13288 DXP reductoisomerase C-terminal domain C2844_RS01120 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase C2844_RS01120 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain C2844_RS01130 PF01161 Phosphatidylethanolamine-binding protein C2844_RS01140 PF00266 Aminotransferase class-V C2844_RS01145 PF04324 BFD-like [2Fe-2S] binding domain C2844_RS01145 PF01106 NifU-like domain C2844_RS01145 PF01592 NifU-like N terminal domain C2844_RS01155 PF18073 Rubredoxin metal binding domain C2844_RS01160 PF01625 Peptide methionine sulfoxide reductase C2844_RS01160 PF01641 SelR domain C2844_RS01165 PF01925 Sulfite exporter TauE/SafE C2844_RS01175 PF00916 Sulfate permease family C2844_RS01175 PF01740 STAS domain C2844_RS01190 PF02348 Cytidylyltransferase C2844_RS01205 PF03738 Glutathionylspermidine synthase preATP-grasp C2844_RS01215 PF08238 Sel1 repeat C2844_RS01215 PF13176 Tetratricopeptide repeat C2844_RS01215 PF13181 Tetratricopeptide repeat C2844_RS01225 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain C2844_RS01225 PF03900 Porphobilinogen deaminase, C-terminal domain C2844_RS01230 PF04073 Aminoacyl-tRNA editing domain C2844_RS01230 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C2844_RS01230 PF03129 Anticodon binding domain C2844_RS01235 PF01488 Shikimate / quinate 5-dehydrogenase C2844_RS01235 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain C2844_RS01235 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain C2844_RS01240 PF00348 Polyprenyl synthetase C2844_RS01255 PF00210 Ferritin-like domain C2844_RS01260 PF00512 His Kinase A (phospho-acceptor) domain C2844_RS01260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2844_RS01270 PF02119 Flagellar P-ring protein C2844_RS01275 PF00271 Helicase conserved C-terminal domain C2844_RS01275 PF00270 DEAD/DEAH box helicase C2844_RS01290 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C2844_RS01290 PF00005 ABC transporter C2844_RS01295 PF00528 Binding-protein-dependent transport system inner membrane component C2844_RS01295 PF12911 N-terminal TM domain of oligopeptide transport permease C C2844_RS01315 PF00709 Adenylosuccinate synthetase C2844_RS01330 PF02163 Peptidase family M50 C2844_RS01335 PF13742 OB-fold nucleic acid binding domain C2844_RS01335 PF02601 Exonuclease VII, large subunit C2844_RS01340 PF01555 DNA methylase C2844_RS01340 PF18273 Type III R-M EcoP15I C-terminal domain C2844_RS01350 PF18643 BsaWI restriction endonuclease type 2 C2844_RS01360 PF17871 AAA lid domain C2844_RS01360 PF02861 Clp amino terminal domain, pathogenicity island component C2844_RS01360 PF10431 C-terminal, D2-small domain, of ClpB protein C2844_RS01360 PF07724 AAA domain (Cdc48 subfamily) C2844_RS01360 PF00004 ATPase family associated with various cellular activities (AAA) C2844_RS01365 PF02683 Cytochrome C biogenesis protein transmembrane region C2844_RS01370 PF01979 Amidohydrolase family C2844_RS01375 PF01979 Amidohydrolase family C2844_RS01385 PF00919 Uncharacterized protein family UPF0004 C2844_RS01385 PF04055 Radical SAM superfamily C2844_RS01410 PF03692 Putative zinc- or iron-chelating domain C2844_RS01420 PF00218 Indole-3-glycerol phosphate synthase C2844_RS01430 PF02541 Ppx/GppA phosphatase family C2844_RS01435 PF01075 Glycosyltransferase family 9 (heptosyltransferase) C2844_RS01445 PF01702 Queuine tRNA-ribosyltransferase C2844_RS01455 PF01761 3-dehydroquinate synthase C2844_RS01465 PF00919 Uncharacterized protein family UPF0004 C2844_RS01465 PF04055 Radical SAM superfamily C2844_RS01470 PF17862 AAA+ lid domain C2844_RS01470 PF01434 Peptidase family M41 C2844_RS01470 PF00004 ATPase family associated with various cellular activities (AAA) C2844_RS01490 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain C2844_RS01490 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain C2844_RS01505 PF04715 Anthranilate synthase component I, N terminal region C2844_RS01505 PF00425 chorismate binding enzyme C2844_RS01510 PF00795 Carbon-nitrogen hydrolase C2844_RS01520 PF00829 Ribosomal prokaryotic L21 protein C2844_RS01525 PF01016 Ribosomal L27 protein C2844_RS01530 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C2844_RS01535 PF00528 Binding-protein-dependent transport system inner membrane component C2844_RS01540 PF00528 Binding-protein-dependent transport system inner membrane component C2844_RS01540 PF12911 N-terminal TM domain of oligopeptide transport permease C C2844_RS01545 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C2844_RS01545 PF00005 ABC transporter C2844_RS01550 PF00005 ABC transporter C2844_RS01550 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C2844_RS01555 PF01018 GTP1/OBG C2844_RS01555 PF01926 50S ribosome-binding GTPase C2844_RS01570 PF00202 Aminotransferase class-III C2844_RS01585 PF00795 Carbon-nitrogen hydrolase C2844_RS01590 PF01522 Polysaccharide deacetylase C2844_RS01600 PF02492 CobW/HypB/UreG, nucleotide-binding domain C2844_RS01600 PF07683 Cobalamin synthesis protein cobW C-terminal domain C2844_RS01610 PF09827 CRISPR associated protein Cas2 C2844_RS01640 PF10615 Protein of unknown function (DUF2470) C2844_RS01640 PF01243 Pyridoxamine 5'-phosphate oxidase C2844_RS01645 PF05746 DALR anticodon binding domain C2844_RS01645 PF03485 Arginyl tRNA synthetase N terminal domain C2844_RS01645 PF00750 tRNA synthetases class I (R) C2844_RS01650 PF02416 mttA/Hcf106 family C2844_RS01655 PF00625 Guanylate kinase C2844_RS01675 PF02107 Flagellar L-ring protein C2844_RS01680 PF02348 Cytidylyltransferase C2844_RS01685 PF02348 Cytidylyltransferase C2844_RS01695 PF02606 Tetraacyldisaccharide-1-P 4'-kinase C2844_RS01700 PF02540 NAD synthase C2844_RS01710 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain C2844_RS01710 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain C2844_RS01715 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain C2844_RS01720 PF03776 Septum formation topological specificity factor MinE C2844_RS01725 PF17782 DprA winged helix domain C2844_RS01725 PF02481 DNA recombination-mediator protein A C2844_RS01730 PF03652 Holliday junction resolvase C2844_RS01785 PF00849 RNA pseudouridylate synthase C2844_RS01790 PF01368 DHH family C2844_RS01790 PF02272 DHHA1 domain C2844_RS01790 PF17768 RecJ OB domain C2844_RS01790 PF10141 Single-strand DNA-specific exonuclease, C terminal domain C2844_RS01795 PF06418 CTP synthase N-terminus C2844_RS01795 PF00117 Glutamine amidotransferase class-I C2844_RS01805 PF01514 Secretory protein of YscJ/FliF family C2844_RS01805 PF08345 Flagellar M-ring protein C-terminal C2844_RS01810 PF01706 FliG C-terminal domain C2844_RS01810 PF14841 FliG middle domain C2844_RS01810 PF14842 FliG N-terminal domain C2844_RS01820 PF02779 Transketolase, pyrimidine binding domain C2844_RS01820 PF13292 1-deoxy-D-xylulose-5-phosphate synthase C2844_RS01820 PF02780 Transketolase, C-terminal domain C2844_RS01825 PF06421 GTP-binding protein LepA C-terminus C2844_RS01825 PF00679 Elongation factor G C-terminus C2844_RS01825 PF03144 Elongation factor Tu domain 2 C2844_RS01825 PF00009 Elongation factor Tu GTP binding domain C2844_RS01835 PF00106 short chain dehydrogenase C2844_RS01855 PF01370 NAD dependent epimerase/dehydratase family C2844_RS01860 PF01416 tRNA pseudouridine synthase C2844_RS01875 PF00268 Ribonucleotide reductase, small chain C2844_RS01885 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family C2844_RS01905 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C2844_RS01905 PF00289 Biotin carboxylase, N-terminal domain C2844_RS01905 PF02785 Biotin carboxylase C-terminal domain C2844_RS01910 PF00364 Biotin-requiring enzyme C2844_RS01915 PF00692 dUTPase C2844_RS01925 PF04452 RNA methyltransferase C2844_RS01935 PF00762 Ferrochelatase C2844_RS01945 PF05140 ResB-like family C2844_RS01945 PF01578 Cytochrome C assembly protein C2844_RS01950 PF18025 Alpha-(1,3)-fucosyltransferase FucT N-terminal domain C2844_RS01950 PF00852 Glycosyltransferase family 10 (fucosyltransferase) C-term C2844_RS01955 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain C2844_RS01955 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase C2844_RS01960 PF05175 Methyltransferase small domain C2844_RS01960 PF17827 PrmC N-terminal domain C2844_RS01965 PF01435 Peptidase family M48 C2844_RS01990 PF00271 Helicase conserved C-terminal domain C2844_RS01990 PF17764 3′ DNA-binding domain (3′BD) C2844_RS01990 PF18074 Primosomal protein N C-terminal domain C2844_RS01990 PF18319 PriA DNA helicase Cys-rich region (CRR) domain C2844_RS01990 PF00270 DEAD/DEAH box helicase C2844_RS01995 PF13649 Methyltransferase domain C2844_RS02000 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain C2844_RS02000 PF02777 Iron/manganese superoxide dismutases, C-terminal domain C2844_RS02005 PF08534 Redoxin C2844_RS02010 PF01584 CheW-like domain C2844_RS02015 PF01627 Hpt domain C2844_RS02015 PF01584 CheW-like domain C2844_RS02015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2844_RS02015 PF02895 Signal transducing histidine kinase, homodimeric domain C2844_RS02015 PF00072 Response regulator receiver domain C2844_RS02020 PF01584 CheW-like domain C2844_RS02020 PF00072 Response regulator receiver domain C2844_RS02030 PF01168 Alanine racemase, N-terminal domain C2844_RS02035 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase C2844_RS02040 PF01842 ACT domain C2844_RS02040 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C2844_RS02040 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C2844_RS02050 PF00575 S1 RNA binding domain C2844_RS02055 PF02401 LytB protein C2844_RS02060 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) C2844_RS02065 PF01588 Putative tRNA binding domain C2844_RS02065 PF03147 Ferredoxin-fold anticodon binding domain C2844_RS02065 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain C2844_RS02065 PF03484 tRNA synthetase B5 domain C2844_RS02070 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain C2844_RS02070 PF01409 tRNA synthetases class II core domain (F) C2844_RS02075 PF01230 HIT domain C2844_RS02080 PF02347 Glycine cleavage system P-protein C2844_RS02090 PF01568 Molydopterin dinucleotide binding domain C2844_RS02090 PF18364 Molybdopterin oxidoreductase N-terminal domain C2844_RS02090 PF00384 Molybdopterin oxidoreductase C2844_RS02100 PF02540 NAD synthase C2844_RS02100 PF00958 GMP synthase C terminal domain C2844_RS02100 PF00117 Glutamine amidotransferase class-I C2844_RS02135 PF01797 Transposase IS200 like C2844_RS02140 PF00924 Mechanosensitive ion channel C2844_RS02150 PF01588 Putative tRNA binding domain C2844_RS02150 PF00133 tRNA synthetases class I (I, L, M and V) C2844_RS02150 PF09334 tRNA synthetases class I (M) C2844_RS02160 PF08003 Protein of unknown function (DUF1698) C2844_RS02175 PF17810 Arginine decarboxylase helical bundle domain C2844_RS02175 PF17944 Arginine decarboxylase C-terminal helical extension C2844_RS02175 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain C2844_RS02245 PF01797 Transposase IS200 like C2844_RS02250 PF07282 Putative transposase DNA-binding domain C2844_RS02250 PF01385 Probable transposase C2844_RS02250 PF12323 Helix-turn-helix domain C2844_RS02260 PF01131 DNA topoisomerase C2844_RS02260 PF01751 Toprim domain C2844_RS02260 PF01396 Topoisomerase DNA binding C4 zinc finger C2844_RS02265 PF03135 CagE, TrbE, VirB family, component of type IV transporter system C2844_RS02370 PF03135 CagE, TrbE, VirB family, component of type IV transporter system C2844_RS02395 PF02384 N-6 DNA Methylase C2844_RS02395 PF12161 HsdM N-terminal domain C2844_RS02400 PF11867 Domain of unknown function (DUF3387) C2844_RS02400 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) C2844_RS02400 PF18766 SWI2/SNF2 ATPase C2844_RS02435 PF00999 Sodium/hydrogen exchanger family C2844_RS02435 PF02254 TrkA-N domain C2844_RS02460 PF00528 Binding-protein-dependent transport system inner membrane component C2844_RS02465 PF03459 TOBE domain C2844_RS02465 PF00005 ABC transporter C2844_RS02470 PF00749 tRNA synthetases class I (E and Q), catalytic domain C2844_RS02480 PF02384 N-6 DNA Methylase C2844_RS02490 PF03144 Elongation factor Tu domain 2 C2844_RS02490 PF00679 Elongation factor G C-terminus C2844_RS02490 PF00009 Elongation factor Tu GTP binding domain C2844_RS02550 PF00830 Ribosomal L28 family C2844_RS02560 PF00953 Glycosyl transferase family 4 C2844_RS02560 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 C2844_RS02565 PF08245 Mur ligase middle domain C2844_RS02565 PF02875 Mur ligase family, glutamate ligase domain C2844_RS02570 PF04359 Protein of unknown function (DUF493) C2844_RS02575 PF03061 Thioesterase superfamily C2844_RS02580 PF00209 Sodium:neurotransmitter symporter family C2844_RS02585 PF00209 Sodium:neurotransmitter symporter family C2844_RS02590 PF00209 Sodium:neurotransmitter symporter family C2844_RS02595 PF02253 Phospholipase A1 C2844_RS02600 PF02767 DNA polymerase III beta subunit, central domain C2844_RS02600 PF00712 DNA polymerase III beta subunit, N-terminal domain C2844_RS02600 PF02768 DNA polymerase III beta subunit, C-terminal domain C2844_RS02605 PF00986 DNA gyrase B subunit, carboxyl terminus C2844_RS02605 PF00204 DNA gyrase B C2844_RS02605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2844_RS02605 PF01751 Toprim domain C2844_RS02620 PF01464 Transglycosylase SLT domain C2844_RS02620 PF10145 Phage-related minor tail protein C2844_RS02620 PF01551 Peptidase family M23 C2844_RS02630 PF15436 Plasminogen-binding protein pgbA N-terminal C2844_RS02630 PF15437 Plasminogen-binding protein pgbA C-terminal C2844_RS02635 PF02913 FAD linked oxidases, C-terminal domain C2844_RS02635 PF01565 FAD binding domain C2844_RS02640 PF01113 Dihydrodipicolinate reductase, N-terminus C2844_RS02640 PF05173 Dihydrodipicolinate reductase, C-terminus C2844_RS02650 PF00120 Glutamine synthetase, catalytic domain C2844_RS02650 PF03951 Glutamine synthetase, beta-Grasp domain C2844_RS02660 PF03948 Ribosomal protein L9, C-terminal domain C2844_RS02660 PF01281 Ribosomal protein L9, N-terminal domain C2844_RS02665 PF00227 Proteasome subunit C2844_RS02670 PF07724 AAA domain (Cdc48 subfamily) C2844_RS02670 PF10431 C-terminal, D2-small domain, of ClpB protein C2844_RS02675 PF01926 50S ribosome-binding GTPase C2844_RS02675 PF07650 KH domain C2844_RS02710 PF02534 Type IV secretory system Conjugative DNA transfer C2844_RS02715 PF00437 Type II/IV secretion system protein C2844_RS02750 PF13117 Cag pathogenicity island protein Cag12 C2844_RS02755 PF16707 Cag pathogenicity island protein S of Helicobacter pylori C2844_RS02815 PF03135 CagE, TrbE, VirB family, component of type IV transporter system C2844_RS02835 PF03507 CagA exotoxin C2844_RS02845 PF01177 Asp/Glu/Hydantoin racemase C2844_RS02850 PF07498 Rho termination factor, N-terminal domain C2844_RS02850 PF07497 Rho termination factor, RNA-binding domain C2844_RS02850 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C2844_RS02855 PF01197 Ribosomal protein L31 C2844_RS02860 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C2844_RS02865 PF00588 SpoU rRNA Methylase family C2844_RS02865 PF08032 RNA 2'-O ribose methyltransferase substrate binding C2844_RS02885 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit C2844_RS02890 PF00109 Beta-ketoacyl synthase, N-terminal domain C2844_RS02890 PF02801 Beta-ketoacyl synthase, C-terminal domain C2844_RS02895 PF00550 Phosphopantetheine attachment site C2844_RS02905 PF01165 Ribosomal protein S21 C2844_RS02920 PF04224 Protein of unknown function, DUF417 C2844_RS02925 PF01678 Diaminopimelate epimerase C2844_RS02930 PF01594 AI-2E family transporter C2844_RS02940 PF01926 50S ribosome-binding GTPase C2844_RS02940 PF06071 Protein of unknown function (DUF933) C2844_RS02945 PF00883 Cytosol aminopeptidase family, catalytic domain C2844_RS02955 PF00156 Phosphoribosyl transferase domain C2844_RS02965 PF02502 Ribose/Galactose Isomerase C2844_RS02970 PF02163 Peptidase family M50 C2844_RS02975 PF10502 Signal peptidase, peptidase S26 C2844_RS02980 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain C2844_RS02980 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain C2844_RS03015 PF04509 CheC-like family C2844_RS03015 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term C2844_RS03020 PF00730 HhH-GPD superfamily base excision DNA repair protein C2844_RS03020 PF00633 Helix-hairpin-helix motif C2844_RS03025 PF04023 FeoA domain C2844_RS03045 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase C2844_RS03045 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II C2844_RS03045 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg C2844_RS03050 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C2844_RS03060 PF08774 VRR-NUC domain C2844_RS03060 PF04851 Type III restriction enzyme, res subunit C2844_RS03065 PF18273 Type III R-M EcoP15I C-terminal domain C2844_RS03065 PF01555 DNA methylase C2844_RS03090 PF00912 Transglycosylase C2844_RS03090 PF00905 Penicillin binding protein transpeptidase domain C2844_RS03095 PF00155 Aminotransferase class I and II C2844_RS03100 PF00672 HAMP domain C2844_RS03100 PF12729 Four helix bundle sensory module for signal transduction C2844_RS03100 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C2844_RS03105 PF00005 ABC transporter C2844_RS03110 PF07196 Flagellin hook IN motif C2844_RS03110 PF00669 Bacterial flagellin N-terminal helical region C2844_RS03110 PF00700 Bacterial flagellin C-terminal helical region C2844_RS03125 PF01208 Uroporphyrinogen decarboxylase (URO-D) C2844_RS03140 PF00873 AcrB/AcrD/AcrF family C2844_RS03165 PF00005 ABC transporter C2844_RS03175 PF01653 NAD-dependent DNA ligase adenylation domain C2844_RS03175 PF00533 BRCA1 C Terminus (BRCT) domain C2844_RS03175 PF03120 NAD-dependent DNA ligase OB-fold domain C2844_RS03180 PF01584 CheW-like domain C2844_RS03180 PF00072 Response regulator receiver domain C2844_RS03185 PF02938 GAD domain C2844_RS03185 PF01336 OB-fold nucleic acid binding domain C2844_RS03185 PF00152 tRNA synthetases class II (D, K and N) C2844_RS03205 PF00719 Inorganic pyrophosphatase C2844_RS03210 PF01713 Smr domain C2844_RS03210 PF00488 MutS domain V C2844_RS03220 PF01225 Mur ligase family, catalytic domain C2844_RS03220 PF08245 Mur ligase middle domain C2844_RS03220 PF02875 Mur ligase family, glutamate ligase domain C2844_RS03225 PF00155 Aminotransferase class I and II C2844_RS03230 PF04551 GcpE protein C2844_RS03235 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle C2844_RS03235 PF14602 Hexapeptide repeat of succinyl-transferase C2844_RS03250 PF02525 Flavodoxin-like fold C2844_RS03255 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal C2844_RS03255 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit C2844_RS03255 PF10518 TAT (twin-arginine translocation) pathway signal sequence C2844_RS03260 PF00374 Nickel-dependent hydrogenase C2844_RS03265 PF01292 Prokaryotic cytochrome b561 C2844_RS03270 PF01750 Hydrogenase maturation protease C2844_RS03295 PF06508 Queuosine biosynthesis protein QueC C2844_RS03300 PF13735 tRNA nucleotidyltransferase domain 2 putative C2844_RS03300 PF01743 Poly A polymerase head domain C2844_RS03300 PF12627 Probable RNA and SrmB- binding site of polymerase A C2844_RS03310 PF00881 Nitroreductase family C2844_RS03315 PF00749 tRNA synthetases class I (E and Q), catalytic domain C2844_RS03320 PF02325 YGGT family C2844_RS03325 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain C2844_RS03325 PF01464 Transglycosylase SLT domain C2844_RS03330 PF00483 Nucleotidyl transferase C2844_RS03340 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) C2844_RS03345 PF10415 Fumarase C C-terminus C2844_RS03345 PF00206 Lyase C2844_RS03355 PF00852 Glycosyltransferase family 10 (fucosyltransferase) C-term C2844_RS03355 PF18025 Alpha-(1,3)-fucosyltransferase FucT N-terminal domain C2844_RS03365 PF00210 Ferritin-like domain C2844_RS03370 PF04055 Radical SAM superfamily C2844_RS03375 PF07244 Surface antigen variable number repeat C2844_RS03375 PF01103 Surface antigen C2844_RS03380 PF04055 Radical SAM superfamily C2844_RS03390 PF02934 GatB/GatE catalytic domain C2844_RS03390 PF02637 GatB domain C2844_RS03405 PF00075 RNase H C2844_RS03410 PF00035 Double-stranded RNA binding motif C2844_RS03410 PF14622 Ribonuclease-III-like C2844_RS03415 PF01264 Chorismate synthase C2844_RS03420 PF10788 Protein of unknown function (DUF2603) C2844_RS03425 PF04055 Radical SAM superfamily C2844_RS03425 PF06969 HemN C-terminal domain C2844_RS03430 PF02754 Cysteine-rich domain C2844_RS03450 PF00155 Aminotransferase class I and II C2844_RS03460 PF18644 Phage integrase SAM-like domain C2844_RS03460 PF00589 Phage integrase family C2844_RS03465 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain C2844_RS03465 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain C2844_RS03470 PF01925 Sulfite exporter TauE/SafE C2844_RS03475 PF02894 Oxidoreductase family, C-terminal alpha/beta domain C2844_RS03475 PF01408 Oxidoreductase family, NAD-binding Rossmann fold C2844_RS03480 PF00317 Ribonucleotide reductase, all-alpha domain C2844_RS03480 PF02867 Ribonucleotide reductase, barrel domain C2844_RS03480 PF03477 ATP cone domain C2844_RS03495 PF14602 Hexapeptide repeat of succinyl-transferase C2844_RS03495 PF12804 MobA-like NTP transferase domain C2844_RS03515 PF07670 Nucleoside recognition C2844_RS03515 PF02421 Ferrous iron transport protein B C2844_RS03515 PF07664 Ferrous iron transport protein B C terminus C2844_RS03530 PF02803 Thiolase, C-terminal domain C2844_RS03530 PF00108 Thiolase, N-terminal domain C2844_RS03535 PF01144 Coenzyme A transferase C2844_RS03540 PF01144 Coenzyme A transferase C2844_RS03545 PF02667 Short chain fatty acid transporter C2844_RS03555 PF01968 Hydantoinase/oxoprolinase C2844_RS03555 PF05378 Hydantoinase/oxoprolinase N-terminal region C2844_RS03560 PF02538 Hydantoinase B/oxoprolinase C2844_RS03565 PF08882 Acetone carboxylase gamma subunit C2844_RS03575 PF01219 Prokaryotic diacylglycerol kinase C2844_RS03580 PF03989 DNA gyrase C-terminal domain, beta-propeller C2844_RS03580 PF00521 DNA gyrase/topoisomerase IV, subunit A C2844_RS03590 PF00072 Response regulator receiver domain C2844_RS03590 PF00158 Sigma-54 interaction domain C2844_RS03595 PF17760 UvrA interaction domain C2844_RS03595 PF17755 UvrA DNA-binding domain C2844_RS03595 PF00005 ABC transporter C2844_RS03605 PF01795 MraW methylase family C2844_RS03615 PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase C2844_RS03635 PF04552 Sigma-54, DNA binding domain C2844_RS03635 PF00309 Sigma-54 factor, Activator interacting domain (AID) C2844_RS03635 PF04963 Sigma-54 factor, core binding domain C2844_RS03640 PF12399 Branched-chain amino acid ATP-binding cassette transporter C2844_RS03640 PF00005 ABC transporter C2844_RS03650 PF12169 DNA polymerase III subunits gamma and tau domain III C2844_RS03650 PF12170 DNA polymerase III tau subunit V interacting with alpha C2844_RS03655 PF01810 LysE type translocator C2844_RS03675 PF17763 Glutaminase/Asparaginase C-terminal domain C2844_RS03675 PF00710 Asparaginase, N-terminal C2844_RS03680 PF03605 Anaerobic c4-dicarboxylate membrane transporter C2844_RS03695 PF01207 Dihydrouridine synthase (Dus) C2844_RS03700 PF01171 PP-loop family C2844_RS03725 PF00919 Uncharacterized protein family UPF0004 C2844_RS03725 PF04055 Radical SAM superfamily C2844_RS03730 PF00156 Phosphoribosyl transferase domain C2844_RS03735 PF00266 Aminotransferase class-V C2844_RS03740 PF04608 Phosphatidylglycerophosphatase A C2844_RS03745 PF07478 D-ala D-ala ligase C-terminus C2844_RS03745 PF01820 D-ala D-ala ligase N-terminus C2844_RS03755 PF02875 Mur ligase family, glutamate ligase domain C2844_RS03755 PF01225 Mur ligase family, catalytic domain C2844_RS03755 PF08245 Mur ligase middle domain C2844_RS03760 PF01230 HIT domain C2844_RS03765 PF14572 Phosphoribosyl synthetase-associated domain C2844_RS03765 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase C2844_RS03775 PF01098 Cell cycle protein C2844_RS03785 PF01926 50S ribosome-binding GTPase C2844_RS03790 PF01479 S4 domain C2844_RS03790 PF00849 RNA pseudouridylate synthase C2844_RS03800 PF02390 Putative methyltransferase C2844_RS03805 PF00005 ABC transporter C2844_RS03830 PF02561 Flagellar protein FliS C2844_RS03840 PF00899 ThiF family C2844_RS03840 PF00581 Rhodanese-like domain C2844_RS03850 PF00795 Carbon-nitrogen hydrolase C2844_RS03855 PF13726 Na+-H+ antiporter family C2844_RS03855 PF03553 Na+/H+ antiporter family C2844_RS03860 PF01554 MatE C2844_RS03865 PF00013 KH domain C2844_RS03865 PF12072 Domain of unknown function (DUF3552) C2844_RS03865 PF01966 HD domain C2844_RS03880 PF00448 SRP54-type protein, GTPase domain C2844_RS03905 PF06463 Molybdenum Cofactor Synthesis C C2844_RS03905 PF04055 Radical SAM superfamily C2844_RS03910 PF12804 MobA-like NTP transferase domain C2844_RS03915 PF01312 FlhB HrpN YscU SpaS Family C2844_RS03925 PF01520 N-acetylmuramoyl-L-alanine amidase C2844_RS03935 PF00579 tRNA synthetases class I (W and Y) C2844_RS03935 PF01479 S4 domain C2844_RS03940 PF02824 TGS domain C2844_RS03940 PF04607 Region found in RelA / SpoT proteins C2844_RS03940 PF13291 ACT domain C2844_RS03945 PF01192 RNA polymerase Rpb6 C2844_RS03950 PF00696 Amino acid kinase family C2844_RS03960 PF00330 Aconitase family (aconitate hydratase) C2844_RS03960 PF06434 Aconitate hydratase 2 N-terminus C2844_RS03960 PF11791 Aconitate B N-terminal domain C2844_RS03990 PF03548 Outer membrane lipoprotein carrier protein LolA C2844_RS03995 PF07517 SecA DEAD-like domain C2844_RS03995 PF01043 SecA preprotein cross-linking domain C2844_RS03995 PF07516 SecA Wing and Scaffold domain C2844_RS03995 PF02810 SEC-C motif C2844_RS04015 PF01420 Type I restriction modification DNA specificity domain C2844_RS04020 PF00403 Heavy-metal-associated domain C2844_RS04025 PF01078 Magnesium chelatase, subunit ChlI C2844_RS04025 PF13335 Magnesium chelatase, subunit ChlI C-terminal C2844_RS04030 PF01327 Polypeptide deformylase C2844_RS04035 PF00574 Clp protease C2844_RS04040 PF05697 Bacterial trigger factor protein (TF) C2844_RS04040 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C2844_RS04040 PF05698 Bacterial trigger factor protein (TF) C-terminus C2844_RS04050 PF05211 Neuraminyllactose-binding hemagglutinin precursor (NLBH) C2844_RS04055 PF01967 MoaC family C2844_RS04060 PF00994 Probable molybdopterin binding domain C2844_RS04065 PF02391 MoaE protein C2844_RS04075 PF00925 GTP cyclohydrolase II C2844_RS04085 PF00925 GTP cyclohydrolase II C2844_RS04085 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase C2844_RS04105 PF01648 4'-phosphopantetheinyl transferase superfamily C2844_RS04110 PF03748 Flagellar basal body-associated protein FliL C2844_RS04130 PF00753 Metallo-beta-lactamase superfamily C2844_RS04135 PF00899 ThiF family C2844_RS04140 PF01618 MotA/TolQ/ExbB proton channel family C2844_RS04145 PF13677 Membrane MotB of proton-channel complex MotA/MotB C2844_RS04145 PF00691 OmpA family C2844_RS04155 PF04069 Substrate binding domain of ABC-type glycine betaine transport system C2844_RS04160 PF00005 ABC transporter C2844_RS04160 PF00571 CBS domain C2844_RS04175 PF01541 GIY-YIG catalytic domain C2844_RS04175 PF08459 UvrC Helix-hairpin-helix N-terminal C2844_RS04175 PF02151 UvrB/uvrC motif C2844_RS04180 PF01842 ACT domain C2844_RS04180 PF00742 Homoserine dehydrogenase C2844_RS04180 PF03447 Homoserine dehydrogenase, NAD binding domain C2844_RS04185 PF02021 Uncharacterised protein family UPF0102 C2844_RS04190 PF00085 Thioredoxin C2844_RS04195 PF07992 Pyridine nucleotide-disulphide oxidoreductase C2844_RS04205 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) C2844_RS04215 PF00119 ATP synthase A chain C2844_RS04220 PF00478 IMP dehydrogenase / GMP reductase domain C2844_RS04220 PF00571 CBS domain C2844_RS04225 PF01425 Amidase C2844_RS04230 PF01121 Dephospho-CoA kinase C2844_RS04235 PF17284 Spermidine synthase tetramerisation domain C2844_RS04245 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal C2844_RS04245 PF01926 50S ribosome-binding GTPase C2844_RS04250 PF00216 Bacterial DNA-binding protein C2844_RS04275 PF02719 Polysaccharide biosynthesis protein C2844_RS04280 PF04127 DNA / pantothenate metabolism flavoprotein C2844_RS04280 PF02441 Flavoprotein C2844_RS04290 PF02581 Thiamine monophosphate synthase C2844_RS04295 PF08543 Phosphomethylpyrimidine kinase C2844_RS04300 PF02110 Hydroxyethylthiazole kinase family C2844_RS04305 PF12008 Type I restriction and modification enzyme - subunit R C terminal C2844_RS04305 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) C2844_RS04305 PF18766 SWI2/SNF2 ATPase C2844_RS04315 PF12161 HsdM N-terminal domain C2844_RS04315 PF02384 N-6 DNA Methylase C2844_RS04325 PF01569 PAP2 superfamily C2844_RS04335 PF00005 ABC transporter C2844_RS04335 PF12848 ABC transporter C2844_RS04340 PF00478 IMP dehydrogenase / GMP reductase domain C2844_RS04345 PF03062 MBOAT, membrane-bound O-acyltransferase family C2844_RS04355 PF13580 SIS domain C2844_RS04360 PF00294 pfkB family carbohydrate kinase C2844_RS04360 PF01467 Cytidylyltransferase-like C2844_RS04365 PF01370 NAD dependent epimerase/dehydratase family C2844_RS04380 PF03309 Type III pantothenate kinase C2844_RS04385 PF15437 Plasminogen-binding protein pgbA C-terminal C2844_RS04395 PF00692 dUTPase C2844_RS04400 PF01272 Transcription elongation factor, GreA/GreB, C-term C2844_RS04400 PF03449 Transcription elongation factor, N-terminal C2844_RS04405 PF02684 Lipid-A-disaccharide synthetase C2844_RS04415 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA C2844_RS04420 PF00460 Flagella basal body rod protein C2844_RS04420 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C2844_RS04420 PF07559 Flagellar basal body protein FlaE C2844_RS04420 PF07196 Flagellin hook IN motif C2844_RS04425 PF02611 CDP-diacylglycerol pyrophosphatase C2844_RS04430 PF08274 PhnA Zinc-Ribbon C2844_RS04430 PF03831 PhnA domain C2844_RS04445 PF00199 Catalase C2844_RS04445 PF06628 Catalase-related immune-responsive C2844_RS04450 PF00593 TonB dependent receptor C2844_RS04450 PF07715 TonB-dependent Receptor Plug Domain C2844_RS04455 PF02075 Crossover junction endodeoxyribonuclease RuvC C2844_RS04485 PF07499 RuvA, C-terminal domain C2844_RS04485 PF01330 RuvA N terminal domain C2844_RS04495 PF03023 Lipid II flippase MurJ C2844_RS04500 PF09190 DALR domain C2844_RS04500 PF01406 tRNA synthetases class I (C) catalytic domain C2844_RS04505 PF03797 Autotransporter beta-domain C2844_RS04505 PF02691 Vacuolating cyotoxin C2844_RS04510 PF00005 ABC transporter C2844_RS04515 PF01032 FecCD transport family C2844_RS04520 PF00106 short chain dehydrogenase C2844_RS04525 PF03061 Thioesterase superfamily C2844_RS04530 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ C2844_RS04540 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ C2844_RS04575 PF01924 Hydrogenase formation hypA family C2844_RS04580 PF01924 Hydrogenase formation hypA family C2844_RS04585 PF01455 HupF/HypC family C2844_RS04590 PF02492 CobW/HypB/UreG, nucleotide-binding domain C2844_RS04625 PF03963 Flagellar hook capping protein - N-terminal region C2844_RS04625 PF13860 FlgD Ig-like domain C2844_RS04625 PF13861 FlgD Tudor-like domain C2844_RS04630 PF07559 Flagellar basal body protein FlaE C2844_RS04630 PF00460 Flagella basal body rod protein C2844_RS04630 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C2844_RS04630 PF07559 Flagellar basal body protein FlaE C2844_RS04630 PF00460 Flagella basal body rod protein C2844_RS04630 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C2844_RS04640 PF02384 N-6 DNA Methylase C2844_RS04640 PF07669 Eco57I restriction-modification methylase C2844_RS04645 PF00580 UvrD/REP helicase N-terminal domain C2844_RS04645 PF13361 UvrD-like helicase C-terminal domain C2844_RS04685 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C2844_RS04685 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain C2844_RS04685 PF02142 MGS-like domain C2844_RS04690 PF01027 Inhibitor of apoptosis-promoting Bax1 C2844_RS04695 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain C2844_RS04695 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain C2844_RS04700 PF03797 Autotransporter beta-domain C2844_RS04700 PF02691 Vacuolating cyotoxin C2844_RS04710 PF01361 Tautomerase enzyme C2844_RS04715 PF02132 RecR protein C2844_RS04720 PF01142 tRNA pseudouridine synthase D (TruD) C2844_RS04725 PF01435 Peptidase family M48 C2844_RS04730 PF01227 GTP cyclohydrolase I C2844_RS04735 PF00348 Polyprenyl synthetase C2844_RS04740 PF01975 Survival protein SurE C2844_RS04750 PF01242 6-pyruvoyl tetrahydropterin synthase C2844_RS04770 PF07690 Major Facilitator Superfamily C2844_RS04785 PF00528 Binding-protein-dependent transport system inner membrane component C2844_RS04790 PF00497 Bacterial extracellular solute-binding proteins, family 3 C2844_RS04795 PF00842 Alanine racemase, C-terminal domain C2844_RS04795 PF01168 Alanine racemase, N-terminal domain C2844_RS04800 PF01235 Sodium:alanine symporter family C2844_RS04805 PF01266 FAD dependent oxidoreductase C2844_RS04810 PF01042 Endoribonuclease L-PSP C2844_RS04820 PF13146 TRL-like protein family C2844_RS04840 PF03553 Na+/H+ antiporter family C2844_RS04860 PF02590 Predicted SPOUT methyltransferase C2844_RS04865 PF17848 Acetyl-coA carboxylase zinc finger domain C2844_RS04865 PF01039 Carboxyl transferase domain C2844_RS04875 PF00994 Probable molybdopterin binding domain C2844_RS04875 PF02464 Competence-damaged protein C2844_RS04875 PF18146 Damage-inducible protein CinA KH domain C2844_RS04885 PF00881 Nitroreductase family C2844_RS04890 PF01636 Phosphotransferase enzyme family C2844_RS04895 PF01555 DNA methylase C2844_RS04895 PF18755 Restriction Enzyme Adenine Methylase Associated C2844_RS04900 PF00881 Nitroreductase family C2844_RS04905 PF01790 Prolipoprotein diacylglyceryl transferase C2844_RS04910 PF00849 RNA pseudouridylate synthase C2844_RS04915 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) C2844_RS04915 PF02390 Putative methyltransferase C2844_RS04925 PF01784 NIF3 (NGG1p interacting factor 3) C2844_RS04930 PF02091 Glycyl-tRNA synthetase alpha subunit C2844_RS04935 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus C2844_RS04935 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus C2844_RS04940 PF00550 Phosphopantetheine attachment site C2844_RS04955 PF00350 Dynamin family C2844_RS04965 PF09827 CRISPR associated protein Cas2 C2844_RS04975 PF00873 AcrB/AcrD/AcrF family C2844_RS04990 PF02092 Glycyl-tRNA synthetase beta subunit C2844_RS05000 PF06415 BPG-independent PGAM N-terminus (iPGM_N) C2844_RS05000 PF01676 Metalloenzyme superfamily C2844_RS05005 PF02686 Glu-tRNAGln amidotransferase C subunit C2844_RS05010 PF00202 Aminotransferase class-III C2844_RS05020 PF02491 SHS2 domain inserted in FTSA C2844_RS05025 PF00091 Tubulin/FtsZ family, GTPase domain C2844_RS05025 PF12327 FtsZ family, C-terminal domain C2844_RS05035 PF02163 Peptidase family M50 C2844_RS05040 PF13742 OB-fold nucleic acid binding domain C2844_RS05040 PF02601 Exonuclease VII, large subunit C2844_RS05060 PF00924 Mechanosensitive ion channel C2844_RS05085 PF01797 Transposase IS200 like C2844_RS05090 PF07282 Putative transposase DNA-binding domain C2844_RS05090 PF01385 Probable transposase C2844_RS05090 PF12323 Helix-turn-helix domain C2844_RS05100 PF02899 Phage integrase, N-terminal SAM-like domain C2844_RS05100 PF00589 Phage integrase family C2844_RS05105 PF07804 HipA-like C-terminal domain C2844_RS05130 PF12323 Helix-turn-helix domain C2844_RS05130 PF07282 Putative transposase DNA-binding domain C2844_RS05130 PF01385 Probable transposase C2844_RS05135 PF01797 Transposase IS200 like C2844_RS05145 PF13614 AAA domain C2844_RS05185 PF01797 Transposase IS200 like C2844_RS05205 PF17941 Polyphosphate kinase C-terminal domain 1 C2844_RS05205 PF02503 Polyphosphate kinase middle domain C2844_RS05205 PF13089 Polyphosphate kinase N-terminal domain C2844_RS05205 PF13090 Polyphosphate kinase C-terminal domain 2 C2844_RS05210 PF01180 Dihydroorotate dehydrogenase C2844_RS05220 PF00701 Dihydrodipicolinate synthetase family C2844_RS05235 PF01066 CDP-alcohol phosphatidyltransferase C2844_RS05240 PF00324 Amino acid permease C2844_RS05245 PF17820 PDZ domain C2844_RS05245 PF13180 PDZ domain C2844_RS05250 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase C2844_RS05250 PF02542 YgbB family C2844_RS05255 PF00072 Response regulator receiver domain C2844_RS05255 PF00486 Transcriptional regulatory protein, C terminal C2844_RS05265 PF01367 5'-3' exonuclease, C-terminal SAM fold C2844_RS05265 PF00476 DNA polymerase family A C2844_RS05265 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain C2844_RS05265 PF01612 3'-5' exonuclease C2844_RS05275 PF01556 DnaJ C terminal domain C2844_RS05275 PF00226 DnaJ domain C2844_RS05280 PF13411 MerR HTH family regulatory protein C2844_RS05285 PF01661 Macro domain C2844_RS05285 PF12002 MgsA AAA+ ATPase C terminal C2844_RS05285 PF05496 Holliday junction DNA helicase RuvB P-loop domain C2844_RS05285 PF16193 AAA C-terminal domain C2844_RS05290 PF01475 Ferric uptake regulator family C2844_RS05305 PF04509 CheC-like family C2844_RS05305 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term C2844_RS05310 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term C2844_RS05310 PF02154 Flagellar motor switch protein FliM C2844_RS05315 PF04545 Sigma-70, region 4 C2844_RS05315 PF04539 Sigma-70 region 3 C2844_RS05315 PF04542 Sigma-70 region 2 C2844_RS05325 PF10609 NUBPL iron-transfer P-loop NTPase C2844_RS05330 PF00448 SRP54-type protein, GTPase domain C2844_RS05335 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) C2844_RS05340 PF00557 Metallopeptidase family M24 C2844_RS05340 PF01321 Creatinase/Prolidase N-terminal domain C2844_RS05345 PF01220 Dehydroquinase class II C2844_RS05355 PF00312 Ribosomal protein S15 C2844_RS05360 PF00771 FHIPEP family C2844_RS05370 PF00072 Response regulator receiver domain C2844_RS05370 PF00486 Transcriptional regulatory protein, C terminal C2844_RS05375 PF00149 Calcineurin-like phosphoesterase C2844_RS05380 PF13193 AMP-binding enzyme C-terminal domain C2844_RS05380 PF00501 AMP-binding enzyme C2844_RS05380 PF16177 Acetyl-coenzyme A synthetase N-terminus C2844_RS05385 PF02576 RimP N-terminal domain C2844_RS05385 PF17384 RimP C-terminal SH3 domain C2844_RS05390 PF02033 Ribosome-binding factor A C2844_RS05395 PF04760 Translation initiation factor IF-2, N-terminal region C2844_RS05395 PF11987 Translation-initiation factor 2 C2844_RS05395 PF00009 Elongation factor Tu GTP binding domain C2844_RS05405 PF00288 GHMP kinases N terminal domain C2844_RS05415 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase C2844_RS05420 PF03775 Septum formation inhibitor MinC, C-terminal domain C2844_RS05445 PF02548 Ketopantoate hydroxymethyltransferase C2844_RS05450 PF05496 Holliday junction DNA helicase RuvB P-loop domain C2844_RS05450 PF05491 RuvB C-terminal winged helix domain C2844_RS05450 PF17864 RuvB AAA lid domain C2844_RS05460 PF00902 Sec-independent protein translocase protein (TatC) C2844_RS05465 PF02547 Queuosine biosynthesis protein C2844_RS05470 PF02527 rRNA small subunit methyltransferase G C2844_RS05495 PF00072 Response regulator receiver domain C2844_RS05505 PF01434 Peptidase family M41 C2844_RS05505 PF17862 AAA+ lid domain C2844_RS05505 PF00004 ATPase family associated with various cellular activities (AAA) C2844_RS05515 PF01066 CDP-alcohol phosphatidyltransferase C2844_RS05520 PF00403 Heavy-metal-associated domain C2844_RS05525 PF00403 Heavy-metal-associated domain C2844_RS05545 PF03824 High-affinity nickel-transport protein C2844_RS05555 PF13304 AAA domain, putative AbiEii toxin, Type IV TA system C2844_RS05570 PF00664 ABC transporter transmembrane region C2844_RS05570 PF00005 ABC transporter C2844_RS05580 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain C2844_RS05580 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain C2844_RS05590 PF01728 FtsJ-like methyltransferase C2844_RS05595 PF06574 FAD synthetase C2844_RS05595 PF01687 Riboflavin kinase C2844_RS05600 PF02780 Transketolase, C-terminal domain C2844_RS05600 PF02779 Transketolase, pyrimidine binding domain C2844_RS05600 PF00456 Transketolase, thiamine diphosphate binding domain C2844_RS05610 PF17854 FtsK alpha domain C2844_RS05610 PF09397 Ftsk gamma domain C2844_RS05610 PF01580 FtsK/SpoIIIE family C2844_RS05620 PF00083 Sugar (and other) transporter C2844_RS05625 PF00460 Flagella basal body rod protein C2844_RS05625 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C2844_RS05640 PF12323 Helix-turn-helix domain C2844_RS05640 PF01385 Probable transposase C2844_RS05640 PF07282 Putative transposase DNA-binding domain C2844_RS05645 PF01797 Transposase IS200 like C2844_RS05655 PF08238 Sel1 repeat C2844_RS05660 PF01081 KDPG and KHG aldolase C2844_RS05665 PF00920 Dehydratase family C2844_RS05670 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain C2844_RS05670 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain C2844_RS05675 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase C2844_RS05680 PF02685 Glucokinase C2844_RS05685 PF00107 Zinc-binding dehydrogenase C2844_RS05685 PF08240 Alcohol dehydrogenase GroES-like domain C2844_RS05705 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase C2844_RS05715 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II C2844_RS05715 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg C2844_RS05720 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C2844_RS05725 PF00206 Lyase C2844_RS05725 PF10397 Adenylosuccinate lyase C-terminus C2844_RS05735 PF04851 Type III restriction enzyme, res subunit C2844_RS05735 PF12344 Ultra-violet resistance protein B C2844_RS05735 PF00271 Helicase conserved C-terminal domain C2844_RS05735 PF02151 UvrB/uvrC motif C2844_RS05735 PF17757 UvrB interaction domain C2844_RS05775 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C2844_RS05775 PF00460 Flagella basal body rod protein C2844_RS05775 PF07559 Flagellar basal body protein FlaE C2844_RS05785 PF00145 C-5 cytosine-specific DNA methylase C2844_RS05800 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C2844_RS05810 PF00691 OmpA family C2844_RS05815 PF07676 WD40-like Beta Propeller Repeat C2844_RS05825 PF02472 Biopolymer transport protein ExbD/TolR C2844_RS05830 PF01618 MotA/TolQ/ExbB proton channel family C2844_RS05835 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain C2844_RS05840 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C2844_RS05840 PF02874 ATP synthase alpha/beta family, beta-barrel domain C2844_RS05845 PF00231 ATP synthase C2844_RS05850 PF00306 ATP synthase alpha/beta chain, C terminal domain C2844_RS05850 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C2844_RS05850 PF02874 ATP synthase alpha/beta family, beta-barrel domain C2844_RS05860 PF00430 ATP synthase B/B' CF(0) C2844_RS05870 PF17762 HTH domain found in ParB protein C2844_RS05870 PF02195 ParB-like nuclease domain C2844_RS05875 PF13614 AAA domain C2844_RS05880 PF08279 HTH domain C2844_RS05880 PF03099 Biotin/lipoate A/B protein ligase family C2844_RS05880 PF02237 Biotin protein ligase C terminal domain C2844_RS05885 PF00551 Formyl transferase C2844_RS05885 PF02911 Formyl transferase, C-terminal domain C2844_RS05925 PF01245 Ribosomal protein L19 C2844_RS05930 PF01746 tRNA (Guanine-1)-methyltransferase C2844_RS05935 PF01782 RimM N-terminal domain C2844_RS05935 PF05239 PRC-barrel domain C2844_RS05945 PF00886 Ribosomal protein S16 C2844_RS05950 PF02978 Signal peptide binding domain C2844_RS05950 PF02881 SRP54-type protein, helical bundle domain C2844_RS05950 PF00448 SRP54-type protein, GTPase domain C2844_RS05955 PF10458 Valyl tRNA synthetase tRNA binding arm C2844_RS05955 PF00133 tRNA synthetases class I (I, L, M and V) C2844_RS05955 PF08264 Anticodon-binding domain of tRNA C2844_RS05960 PF02623 FliW protein C2844_RS05965 PF04101 Glycosyltransferase family 28 C-terminal domain C2844_RS05965 PF03033 Glycosyltransferase family 28 N-terminal domain C2844_RS05980 PF03807 NADP oxidoreductase coenzyme F420-dependent C2844_RS05980 PF14748 Pyrroline-5-carboxylate reductase dimerisation C2844_RS05985 PF02661 Fic/DOC family C2844_RS05990 PF02130 Uncharacterized protein family UPF0054 C2844_RS05995 PF00258 Flavodoxin C2844_RS06010 PF07992 Pyridine nucleotide-disulphide oxidoreductase C2844_RS06020 PF00342 Phosphoglucose isomerase C2844_RS06030 PF02554 Carbon starvation protein CstA C2844_RS06030 PF13722 5TM C-terminal transporter carbon starvation CstA C2844_RS06035 PF00528 Binding-protein-dependent transport system inner membrane component C2844_RS06040 PF00528 Binding-protein-dependent transport system inner membrane component C2844_RS06045 PF00005 ABC transporter C2844_RS06060 PF07690 Major Facilitator Superfamily C2844_RS06065 PF00860 Permease family C2844_RS06080 PF01048 Phosphorylase superfamily C2844_RS06085 PF01676 Metalloenzyme superfamily C2844_RS06090 PF01773 Na+ dependent nucleoside transporter N-terminus C2844_RS06090 PF07662 Na+ dependent nucleoside transporter C-terminus C2844_RS06100 PF07690 Major Facilitator Superfamily C2844_RS06105 PF01171 PP-loop family C2844_RS06110 PF00999 Sodium/hydrogen exchanger family C2844_RS06110 PF02080 TrkA-C domain C2844_RS06110 PF02254 TrkA-N domain C2844_RS06115 PF01554 MatE C2844_RS06120 PF07690 Major Facilitator Superfamily C2844_RS06125 PF00194 Eukaryotic-type carbonic anhydrase C2844_RS06140 PF01118 Semialdehyde dehydrogenase, NAD binding domain C2844_RS06140 PF02774 Semialdehyde dehydrogenase, dimerisation domain C2844_RS06145 PF13393 Histidyl-tRNA synthetase C2844_RS06145 PF03129 Anticodon binding domain C2844_RS06150 PF01075 Glycosyltransferase family 9 (heptosyltransferase) C2844_RS06160 PF00248 Aldo/keto reductase family C2844_RS06165 PF03764 Elongation factor G, domain IV C2844_RS06165 PF14492 Elongation Factor G, domain II C2844_RS06165 PF03144 Elongation factor Tu domain 2 C2844_RS06165 PF00009 Elongation factor Tu GTP binding domain C2844_RS06165 PF00679 Elongation factor G C-terminus C2844_RS06170 PF00177 Ribosomal protein S7p/S5e C2844_RS06175 PF00164 Ribosomal protein S12/S23 C2844_RS06180 PF00562 RNA polymerase Rpb2, domain 6 C2844_RS06180 PF10385 RNA polymerase beta subunit external 1 domain C2844_RS06180 PF05000 RNA polymerase Rpb1, domain 4 C2844_RS06180 PF04560 RNA polymerase Rpb2, domain 7 C2844_RS06180 PF04998 RNA polymerase Rpb1, domain 5 C2844_RS06180 PF04565 RNA polymerase Rpb2, domain 3 C2844_RS06180 PF04561 RNA polymerase Rpb2, domain 2 C2844_RS06180 PF04983 RNA polymerase Rpb1, domain 3 C2844_RS06180 PF04563 RNA polymerase beta subunit C2844_RS06180 PF04997 RNA polymerase Rpb1, domain 1 C2844_RS06180 PF00623 RNA polymerase Rpb1, domain 2 C2844_RS06190 PF16320 Ribosomal protein L7/L12 dimerisation domain C2844_RS06190 PF00542 Ribosomal protein L7/L12 C-terminal domain C2844_RS06195 PF00466 Ribosomal protein L10 C2844_RS06200 PF00687 Ribosomal protein L1p/L10e family C2844_RS06205 PF00298 Ribosomal protein L11, RNA binding domain C2844_RS06205 PF03946 Ribosomal protein L11, N-terminal domain C2844_RS06210 PF02357 Transcription termination factor nusG C2844_RS06225 PF00471 Ribosomal protein L33 C2844_RS06230 PF03143 Elongation factor Tu C-terminal domain C2844_RS06230 PF00009 Elongation factor Tu GTP binding domain C2844_RS06230 PF03144 Elongation factor Tu domain 2 C2844_RS06255 PF00664 ABC transporter transmembrane region C2844_RS06255 PF00005 ABC transporter C2844_RS06265 PF02086 D12 class N6 adenine-specific DNA methyltransferase C2844_RS06275 PF00132 Bacterial transferase hexapeptide (six repeats) C2844_RS06295 PF00137 ATP synthase subunit C C2844_RS06300 PF00013 KH domain C2844_RS06300 PF00575 S1 RNA binding domain C2844_RS06300 PF03725 3' exoribonuclease family, domain 2 C2844_RS06300 PF01138 3' exoribonuclease family, domain 1 C2844_RS06310 PF04453 LPS transport system D C2844_RS06310 PF03968 OstA-like protein C2844_RS06320 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain C2844_RS06320 PF02843 Phosphoribosylglycinamide synthetase, C domain C2844_RS06320 PF02844 Phosphoribosylglycinamide synthetase, N domain C2844_RS06330 PF00005 ABC transporter C2844_RS06335 PF01255 Putative undecaprenyl diphosphate synthase C2844_RS06355 PF02537 CrcB-like protein, Camphor Resistance (CrcB) C2844_RS06360 PF04055 Radical SAM superfamily C2844_RS06365 PF13442 Cytochrome C oxidase, cbb3-type, subunit III C2844_RS06370 PF00293 NUDIX domain C2844_RS06375 PF13840 ACT domain C2844_RS06375 PF01842 ACT domain C2844_RS06375 PF00696 Amino acid kinase family C2844_RS06390 PF00809 Pterin binding enzyme C2844_RS06400 PF00892 EamA-like transporter family C2844_RS06415 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain C2844_RS06415 PF00117 Glutamine amidotransferase class-I C2844_RS06420 PF00795 Carbon-nitrogen hydrolase C2844_RS06430 PF02545 Maf-like protein C2844_RS06435 PF02272 DHHA1 domain C2844_RS06435 PF01411 tRNA synthetases class II (A) C2844_RS06435 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain C2844_RS06455 PF01084 Ribosomal protein S18 C2844_RS06460 PF00436 Single-strand binding protein family C2844_RS06465 PF01250 Ribosomal protein S6 C2844_RS06470 PF06144 DNA polymerase III, delta subunit C2844_RS06475 PF00773 RNB domain C2844_RS06480 PF08501 Shikimate dehydrogenase substrate binding domain C2844_RS06490 PF00528 Binding-protein-dependent transport system inner membrane component C2844_RS06495 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C2844_RS06500 PF00579 tRNA synthetases class I (W and Y) C2844_RS06510 PF03840 Preprotein translocase SecG subunit C2844_RS06515 PF01765 Ribosome recycling factor C2844_RS06520 PF00156 Phosphoribosyl transferase domain C2844_RS06535 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 C2844_RS06540 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit C2844_RS06545 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit C2844_RS06550 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit C2844_RS06565 PF01568 Molydopterin dinucleotide binding domain C2844_RS06565 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region C2844_RS06565 PF04879 Molybdopterin oxidoreductase Fe4S4 domain C2844_RS06565 PF12838 4Fe-4S dicluster domain C2844_RS06565 PF00384 Molybdopterin oxidoreductase C2844_RS06570 PF00146 NADH dehydrogenase C2844_RS06575 PF12838 4Fe-4S dicluster domain C2844_RS06580 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 C2844_RS06585 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L C2844_RS06590 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus C2844_RS06590 PF00361 Proton-conducting membrane transporter C2844_RS06595 PF00361 Proton-conducting membrane transporter C2844_RS06595 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus C2844_RS06600 PF00361 Proton-conducting membrane transporter C2844_RS06610 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III C2844_RS06610 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II C2844_RS06610 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I C2844_RS06610 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain C2844_RS06620 PF00290 Tryptophan synthase alpha chain C2844_RS06625 PF00291 Pyridoxal-phosphate dependent enzyme C2844_RS06630 PF00218 Indole-3-glycerol phosphate synthase C2844_RS06630 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase C2844_RS06635 PF02885 Glycosyl transferase family, helical bundle domain C2844_RS06635 PF00591 Glycosyl transferase family, a/b domain C2844_RS06640 PF00117 Glutamine amidotransferase class-I C2844_RS06645 PF00425 chorismate binding enzyme C2844_RS06645 PF04715 Anthranilate synthase component I, N terminal region C2844_RS06660 PF01075 Glycosyltransferase family 9 (heptosyltransferase) C2844_RS06670 PF04264 YceI-like domain C2844_RS06675 PF03070 TENA/THI-4/PQQC family C2844_RS06690 PF04973 Nicotinamide mononucleotide transporter C2844_RS06705 PF01196 Ribosomal protein L17 C2844_RS06710 PF01000 RNA polymerase Rpb3/RpoA insert domain C2844_RS06710 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain C2844_RS06710 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain C2844_RS06715 PF01479 S4 domain C2844_RS06715 PF00163 Ribosomal protein S4/S9 N-terminal domain C2844_RS06720 PF00411 Ribosomal protein S11 C2844_RS06725 PF00416 Ribosomal protein S13/S18 C2844_RS06730 PF00444 Ribosomal protein L36 C2844_RS06735 PF01176 Translation initiation factor 1A / IF-1 C2844_RS06740 PF00557 Metallopeptidase family M24 C2844_RS06745 PF00344 SecY translocase C2844_RS06750 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A C2844_RS06755 PF00333 Ribosomal protein S5, N-terminal domain C2844_RS06755 PF03719 Ribosomal protein S5, C-terminal domain C2844_RS06760 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast C2844_RS06765 PF00347 Ribosomal protein L6 C2844_RS06770 PF00410 Ribosomal protein S8 C2844_RS06775 PF00253 Ribosomal protein S14p/S29e C2844_RS06780 PF00281 Ribosomal protein L5 C2844_RS06780 PF00673 ribosomal L5P family C-terminus C2844_RS06785 PF00467 KOW motif C2844_RS06785 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 C2844_RS06790 PF00238 Ribosomal protein L14p/L23e C2844_RS06795 PF00366 Ribosomal protein S17 C2844_RS06800 PF00831 Ribosomal L29 protein C2844_RS06805 PF00252 Ribosomal protein L16p/L10e C2844_RS06810 PF07650 KH domain C2844_RS06810 PF00189 Ribosomal protein S3, C-terminal domain C2844_RS06815 PF00237 Ribosomal protein L22p/L17e C2844_RS06820 PF00203 Ribosomal protein S19 C2844_RS06825 PF00181 Ribosomal Proteins L2, RNA binding domain C2844_RS06825 PF03947 Ribosomal Proteins L2, C-terminal domain C2844_RS06830 PF00276 Ribosomal protein L23 C2844_RS06835 PF00573 Ribosomal protein L4/L1 family C2844_RS06840 PF00297 Ribosomal protein L3 C2844_RS06845 PF00338 Ribosomal protein S10p/S20e C2844_RS06860 PF01351 Ribonuclease HII C2844_RS06870 PF00206 Lyase C2844_RS06870 PF10415 Fumarase C C-terminus C2844_RS06890 PF00529 HlyD membrane-fusion protein of T1SS C2844_RS06890 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C2844_RS06895 PF00873 AcrB/AcrD/AcrF family C2844_RS06900 PF05437 Branched-chain amino acid transport protein (AzlD) C2844_RS06905 PF03591 AzlC protein C2844_RS06910 PF00226 DnaJ domain C2844_RS06910 PF00684 DnaJ central domain C2844_RS06910 PF01556 DnaJ C terminal domain C2844_RS06935 PF01467 Cytidylyltransferase-like C2844_RS06940 PF08753 NikR C terminal nickel binding domain C2844_RS06940 PF01402 Ribbon-helix-helix protein, copG family C2844_RS06945 PF01618 MotA/TolQ/ExbB proton channel family C2844_RS06950 PF02472 Biopolymer transport protein ExbD/TolR C2844_RS06955 PF03544 Gram-negative bacterial TonB protein C-terminal C2844_RS06970 PF03741 Integral membrane protein TerC family C2844_RS06975 PF01544 CorA-like Mg2+ transporter protein C2844_RS06980 PF00162 Phosphoglycerate kinase C2844_RS06985 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain C2844_RS06985 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain C2844_RS06990 PF03167 Uracil DNA glycosylase superfamily C2844_RS06995 PF01553 Acyltransferase C2844_RS07005 PF03572 Peptidase family S41 C2844_RS07005 PF13180 PDZ domain C2844_RS07015 PF01555 DNA methylase C2844_RS07015 PF18755 Restriction Enzyme Adenine Methylase Associated C2844_RS07025 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain C2844_RS07025 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain C2844_RS07030 PF02445 Quinolinate synthetase A protein C2844_RS07035 PF02666 Phosphatidylserine decarboxylase C2844_RS07050 PF01040 UbiA prenyltransferase family C2844_RS07060 PF00772 DnaB-like helicase N terminal domain C2844_RS07060 PF03796 DnaB-like helicase C terminal domain C2844_RS07065 PF03853 YjeF-related protein N-terminus C2844_RS07065 PF01256 Carbohydrate kinase C2844_RS07070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C2844_RS07075 PF00486 Transcriptional regulatory protein, C terminal C2844_RS07075 PF00072 Response regulator receiver domain C2844_RS07085 PF00302 Chloramphenicol acetyltransferase C2844_RS07095 PF01555 DNA methylase C2844_RS07105 PF00583 Acetyltransferase (GNAT) family C2844_RS07120 PF04085 rod shape-determining protein MreC C2844_RS07130 PF10431 C-terminal, D2-small domain, of ClpB protein C2844_RS07130 PF07724 AAA domain (Cdc48 subfamily) C2844_RS07135 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 C2844_RS07135 PF00132 Bacterial transferase hexapeptide (six repeats) C2844_RS07140 PF07977 FabA-like domain C2844_RS07150 PF02623 FliW protein C2844_RS07155 PF13525 Outer membrane lipoprotein C2844_RS07160 PF02190 ATP-dependent protease La (LON) substrate-binding domain C2844_RS07160 PF05362 Lon protease (S16) C-terminal proteolytic domain C2844_RS07160 PF00004 ATPase family associated with various cellular activities (AAA) C2844_RS07165 PF01842 ACT domain C2844_RS07165 PF02153 Prephenate dehydrogenase C2844_RS07190 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain C2844_RS07195 PF00834 Ribulose-phosphate 3 epimerase family C2844_RS07200 PF14480 DNA polymerase III polC-type N-terminus I C2844_RS07200 PF00929 Exonuclease C2844_RS07200 PF02811 PHP domain C2844_RS07200 PF14579 Helix-hairpin-helix motif C2844_RS07200 PF17657 Bacterial DNA polymerase III alpha subunit finger domain C2844_RS07200 PF11490 DNA polymerase III polC-type N-terminus II C2844_RS07200 PF07733 Bacterial DNA polymerase III alpha NTPase domain C2844_RS07235 PF02463 RecF/RecN/SMC N terminal domain C2844_RS07240 PF01513 ATP-NAD kinase C2844_RS07255 PF05222 Alanine dehydrogenase/PNT, N-terminal domain C2844_RS07255 PF01262 Alanine dehydrogenase/PNT, C-terminal domain C2844_RS07260 PF00491 Arginase family C2844_RS07265 PF07715 TonB-dependent Receptor Plug Domain C2844_RS07265 PF07660 Secretin and TonB N terminus short domain C2844_RS07265 PF00593 TonB dependent receptor C2844_RS07275 PF11867 Domain of unknown function (DUF3387) C2844_RS07275 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) C2844_RS07275 PF18766 SWI2/SNF2 ATPase C2844_RS07280 PF02384 N-6 DNA Methylase C2844_RS07280 PF12161 HsdM N-terminal domain C2844_RS07295 PF04055 Radical SAM superfamily C2844_RS07295 PF06968 Biotin and Thiamin Synthesis associated domain C2844_RS07300 PF03631 Virulence factor BrkB C2844_RS07345 PF14489 QueF-like protein C2844_RS07370 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain C2844_RS07375 PF01313 Bacterial export proteins, family 3 C2844_RS07380 PF18269 T3SS EscN ATPase C-terminal domain C2844_RS07380 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C2844_RS07385 PF00437 Type II/IV secretion system protein C2844_RS07390 PF00133 tRNA synthetases class I (I, L, M and V) C2844_RS07390 PF08264 Anticodon-binding domain of tRNA C2844_RS07395 PF01479 S4 domain C2844_RS07415 PF04055 Radical SAM superfamily C2844_RS07420 PF00571 CBS domain C2844_RS07420 PF01380 SIS domain C2844_RS07425 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain C2844_RS07425 PF17770 Ribonuclease J C-terminal domain C2844_RS07425 PF00753 Metallo-beta-lactamase superfamily C2844_RS07430 PF00398 Ribosomal RNA adenine dimethylase C2844_RS07450 PF00551 Formyl transferase C2844_RS07450 PF01842 ACT domain C2844_RS07495 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD C2844_RS07500 PF02599 Global regulator protein family C2844_RS07505 PF00288 GHMP kinases N terminal domain C2844_RS07510 PF01668 SmpB protein C2844_RS07515 PF01618 MotA/TolQ/ExbB proton channel family C2844_RS07520 PF02472 Biopolymer transport protein ExbD/TolR C2844_RS07525 PF00468 Ribosomal protein L34 C2844_RS07530 PF00825 Ribonuclease P C2844_RS07535 PF01809 Putative membrane protein insertion efficiency factor C2844_RS07540 PF14849 YidC periplasmic domain C2844_RS07540 PF02096 60Kd inner membrane protein C2844_RS07550 PF12631 MnmE helical domain C2844_RS07550 PF01926 50S ribosome-binding GTPase C2844_RS07550 PF10396 GTP-binding protein TrmE N-terminus C2844_RS07575 PF02169 LPP20 lipoprotein C2844_RS07585 PF00085 Thioredoxin C2844_RS07590 PF01479 S4 domain C2844_RS07590 PF00849 RNA pseudouridylate synthase C2844_RS07600 PF00034 Cytochrome c C2844_RS07600 PF03150 Di-haem cytochrome c peroxidase C2844_RS07620 PF00005 ABC transporter C2844_RS07620 PF09383 NIL domain C2844_RS07625 PF02405 Permease MlaE C2844_RS07635 PF01063 Amino-transferase class IV C2844_RS07645 PF00476 DNA polymerase family A C2844_RS07645 PF01367 5'-3' exonuclease, C-terminal SAM fold C2844_RS07645 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain C2844_RS07655 PF02384 N-6 DNA Methylase C2844_RS07665 PF02223 Thymidylate kinase C2844_RS07670 PF01467 Cytidylyltransferase-like C2844_RS07675 PF02441 Flavoprotein C2844_RS07685 PF13361 UvrD-like helicase C-terminal domain C2844_RS07685 PF00580 UvrD/REP helicase N-terminal domain C2844_RS07695 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C2844_RS07695 PF02403 Seryl-tRNA synthetase N-terminal domain C2844_RS07705 PF02609 Exonuclease VII small subunit C2844_RS07710 PF01209 ubiE/COQ5 methyltransferase family C2844_RS07715 PF03653 Uncharacterised protein family (UPF0093) C2844_RS07720 PF09186 Domain of unknown function (DUF1949) C2844_RS07720 PF01205 Uncharacterized protein family UPF0029 C2844_RS07735 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C2844_RS07745 PF01595 Cyclin M transmembrane N-terminal domain C2844_RS07745 PF03471 Transporter associated domain C2844_RS07745 PF00571 CBS domain C2844_RS07750 PF01384 Phosphate transporter family C2844_RS07755 PF01106 NifU-like domain C2844_RS07765 PF02875 Mur ligase family, glutamate ligase domain C2844_RS07765 PF08245 Mur ligase middle domain C2844_RS07770 PF00923 Transaldolase/Fructose-6-phosphate aldolase C2844_RS07775 PF14693 Ribosomal protein TL5, C-terminal domain C2844_RS07775 PF01386 Ribosomal L25p family C2844_RS07780 PF01195 Peptidyl-tRNA hydrolase C2844_RS07810 PF05175 Methyltransferase small domain C2844_RS07815 PF01872 RibD C-terminal domain C2844_RS07815 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region C2844_RS07820 PF03616 Sodium/glutamate symporter C2844_RS07825 PF16653 Saccharopine dehydrogenase C-terminal domain C2844_RS07825 PF03435 Saccharopine dehydrogenase NADP binding domain C2844_RS07830 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase C2844_RS07830 PF12801 4Fe-4S binding domain C2844_RS07830 PF13746 4Fe-4S dicluster domain C2844_RS07835 PF02660 Glycerol-3-phosphate acyltransferase C2844_RS07855 PF03841 L-seryl-tRNA selenium transferase C2844_RS07860 PF13184 NusA-like KH domain C2844_RS07860 PF08529 NusA N-terminal domain C2844_RS07870 PF12950 TaqI-like C-terminal specificity domain C2844_RS07870 PF07669 Eco57I restriction-modification methylase C2844_RS07885 PF04851 Type III restriction enzyme, res subunit C2844_RS07885 PF08774 VRR-NUC domain C2844_RS07895 PF00271 Helicase conserved C-terminal domain C2844_RS07895 PF04851 Type III restriction enzyme, res subunit C2844_RS07910 PF03372 Endonuclease/Exonuclease/phosphatase family C2844_RS07925 PF08299 Bacterial dnaA protein helix-turn-helix C2844_RS07925 PF00308 Bacterial dnaA protein C2844_RS07935 PF10398 Protein of unknown function (DUF2443) C2844_RS07940 PF01380 SIS domain C2844_RS07945 PF02511 Thymidylate synthase complementing protein C2844_RS07955 PF07282 Putative transposase DNA-binding domain C2844_RS07955 PF12323 Helix-turn-helix domain C2844_RS07955 PF01385 Probable transposase C2844_RS07960 PF01797 Transposase IS200 like C2844_RS07985 PF00033 Cytochrome b/b6/petB C2844_RS07985 PF00032 Cytochrome b(C-terminal)/b6/petD C2844_RS07990 PF00355 Rieske [2Fe-2S] domain C2844_RS07990 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal C2844_RS07995 PF17757 UvrB interaction domain C2844_RS07995 PF03461 TRCF domain C2844_RS07995 PF00271 Helicase conserved C-terminal domain C2844_RS07995 PF00270 DEAD/DEAH box helicase C2844_RS07995 PF02559 CarD-like/TRCF domain C2844_RS08005 PF04225 Opacity-associated protein A LysM-like domain C2844_RS08005 PF01551 Peptidase family M23 C2844_RS08015 PF08245 Mur ligase middle domain C2844_RS08015 PF02875 Mur ligase family, glutamate ligase domain C2844_RS08025 PF00133 tRNA synthetases class I (I, L, M and V) C2844_RS08025 PF09334 tRNA synthetases class I (M) C2844_RS08025 PF13603 Leucyl-tRNA synthetase, Domain 2 C2844_RS08035 PF07549 SecD/SecF GG Motif C2844_RS08035 PF02355 Protein export membrane protein C2844_RS08040 PF02355 Protein export membrane protein C2844_RS08045 PF02699 Preprotein translocase subunit C2844_RS08050 PF06965 Na+/H+ antiporter 1 C2844_RS08055 PF12705 PD-(D/E)XK nuclease superfamily C2844_RS08055 PF13361 UvrD-like helicase C-terminal domain C2844_RS08055 PF00580 UvrD/REP helicase N-terminal domain C2844_RS08060 PF00318 Ribosomal protein S2 C2844_RS08065 PF00889 Elongation factor TS C2844_RS08070 PF03717 Penicillin-binding Protein dimerisation domain C2844_RS08070 PF00905 Penicillin binding protein transpeptidase domain C2844_RS08080 PF02049 Flagellar hook-basal body complex protein FliE C2844_RS08085 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C2844_RS08085 PF00460 Flagella basal body rod protein C2844_RS08090 PF00460 Flagella basal body rod protein C2844_RS08095 PF01098 Cell cycle protein C2844_RS08110 PF00578 AhpC/TSA family C2844_RS08110 PF10417 C-terminal domain of 1-Cys peroxiredoxin C2844_RS08115 PF03180 NLPA lipoprotein C2844_RS08120 PF00905 Penicillin binding protein transpeptidase domain C2844_RS08120 PF03717 Penicillin-binding Protein dimerisation domain C2844_RS08130 PF01926 50S ribosome-binding GTPase C2844_RS08150 PF03330 Lytic transglycolase C2844_RS08150 PF05036 Sporulation related domain C2844_RS08155 PF01476 LysM domain C2844_RS08155 PF01464 Transglycosylase SLT domain C2844_RS08160 PF01026 TatD related DNase C2844_RS08165 PF00677 Lumazine binding domain C2844_RS08175 PF09383 NIL domain C2844_RS08175 PF00005 ABC transporter C2844_RS08180 PF00528 Binding-protein-dependent transport system inner membrane component C2844_RS08195 PF01569 PAP2 superfamily C2844_RS08200 PF00953 Glycosyl transferase family 4 C2844_RS08205 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ C2844_RS08210 PF04166 Pyridoxal phosphate biosynthetic protein PdxA C2844_RS08215 PF00814 Glycoprotease family C2844_RS08220 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C2844_RS08220 PF00460 Flagella basal body rod protein