locus-tag	class	description
ACP92_RS00005	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
ACP92_RS00010	COG0592	DNA-directed DNA polymerase activity
ACP92_RS00055	COG0154	amidase activity
ACP92_RS00090	COG2733	membrane
ACP92_RS00095	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
ACP92_RS00150	COG0840	transmembrane signaling receptor activity
ACP92_RS00155	COG4133	protoheme IX ABC transporter activity
ACP92_RS00170	COG3712	iron ion homeostasis
ACP92_RS00185	COG2814	Major facilitator Superfamily
ACP92_RS00190	COG0583	DNA-binding transcription factor activity
ACP92_RS00195	COG0427	acetyl-CoA hydrolase
ACP92_RS00200	COG0583	DNA-binding transcription factor activity
ACP92_RS00235	COG2814	Major facilitator Superfamily
ACP92_RS00240	COG0583	DNA-binding transcription factor activity
ACP92_RS00265	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
ACP92_RS00275	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
ACP92_RS00295	COG3158	transport of potassium into the cell
ACP92_RS00300	COG2423	ornithine cyclodeaminase activity
ACP92_RS00315	COG0765	amino acid transport
ACP92_RS00345	COG5000	phosphorelay sensor kinase activity
ACP92_RS00355	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
ACP92_RS00355	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
ACP92_RS00370	COG1297	OPT oligopeptide transporter protein
ACP92_RS00375	COG4589	Belongs to the CDS family
ACP92_RS00385	COG0671	phosphoesterase, PA-phosphatase related
ACP92_RS00385	COG2453	phosphatase
ACP92_RS00390	COG2267	carboxylic ester hydrolase activity
ACP92_RS00395	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
ACP92_RS00415	COG0347	Belongs to the P(II) protein family
ACP92_RS00420	COG0004	ammonium transporteR
ACP92_RS00430	COG0189	ligase activity
ACP92_RS00440	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
ACP92_RS00445	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
ACP92_RS00450	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
ACP92_RS00460	COG2814	Major facilitator Superfamily
ACP92_RS00480	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
ACP92_RS00500	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
ACP92_RS00505	COG0081	regulation of translation
ACP92_RS00510	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
ACP92_RS00515	COG0222	ribosome binding
ACP92_RS00520	COG0085	RNA polymerase activity
ACP92_RS00525	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
ACP92_RS00530	COG4771	TonB-dependent receptor
ACP92_RS00540	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
ACP92_RS00545	COG0049	tRNA binding
ACP92_RS00550	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
ACP92_RS00555	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
ACP92_RS00560	COG0051	transcription antitermination factor activity, RNA binding
ACP92_RS00565	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
ACP92_RS00570	COG0088	Forms part of the polypeptide exit tunnel
ACP92_RS00575	COG0089	rRNA binding
ACP92_RS00580	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
ACP92_RS00585	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
ACP92_RS00590	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
ACP92_RS00595	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
ACP92_RS00600	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
ACP92_RS00605	COG0255	Belongs to the universal ribosomal protein uL29 family
ACP92_RS00610	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
ACP92_RS00615	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
ACP92_RS00620	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
ACP92_RS00625	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
ACP92_RS00630	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
ACP92_RS00635	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
ACP92_RS00640	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
ACP92_RS00645	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
ACP92_RS00650	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
ACP92_RS00655	COG1841	ribosomal large subunit assembly
ACP92_RS00660	COG0200	Binds to the 23S rRNA
ACP92_RS00665	COG0201	protein transport
ACP92_RS00670	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
ACP92_RS00675	COG0257	Belongs to the bacterial ribosomal protein bL36 family
ACP92_RS00680	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
ACP92_RS00685	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
ACP92_RS00690	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
ACP92_RS00695	COG0202	RNA polymerase activity
ACP92_RS00700	COG0203	ribosomal protein L17
ACP92_RS00705	COG1324	tolerance protein
ACP92_RS00710	COG4232	protein-disulfide reductase activity
ACP92_RS00715	COG0450	alkyl hydroperoxide reductase
ACP92_RS00730	COG1012	belongs to the aldehyde dehydrogenase family
ACP92_RS00740	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
ACP92_RS00745	COG1595	DNA-templated transcription, initiation
ACP92_RS00755	COG0218	Necessary for normal cell division and for the maintenance of normal septation
ACP92_RS00765	COG1333	cytochrome c biogenesis protein
ACP92_RS00770	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
ACP92_RS00775	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
ACP92_RS00790	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
ACP92_RS00800	COG1952	One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA
ACP92_RS00810	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
ACP92_RS00815	COG0588	phosphoglycerate mutase activity
ACP92_RS00820	COG4942	peptidase
ACP92_RS00825	COG0793	Belongs to the peptidase S41A family
ACP92_RS00830	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
ACP92_RS00845	COG4206	TonB-dependent receptor
ACP92_RS00870	COG3938	Belongs to the proline racemase family
ACP92_RS00900	COG0506	proline dehydrogenase activity
ACP92_RS00900	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
ACP92_RS00900	COG4230	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
ACP92_RS00905	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
ACP92_RS00910	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
ACP92_RS00920	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
ACP92_RS00940	COG1965	Belongs to the frataxin family
ACP92_RS00960	COG4146	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
ACP92_RS00970	COG3387	PFAM Glycoside hydrolase 15-related
ACP92_RS00975	COG0380	Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor
ACP92_RS00990	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
ACP92_RS01165	COG0494	nUDIX hydrolase
ACP92_RS01170	COG3568	Endonuclease Exonuclease Phosphatase
ACP92_RS01175	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
ACP92_RS01180	COG0183	Belongs to the thiolase family
ACP92_RS01195	COG0765	amino acid transport
ACP92_RS01200	COG0765	amino acid transport
ACP92_RS01210	COG2186	Transcriptional regulator
ACP92_RS01255	COG1960	acyl-CoA dehydrogenase activity
ACP92_RS01260	COG1024	Enoyl-CoA hydratase
ACP92_RS01260	COG1250	3-hydroxyacyl-CoA dehydrogenase
ACP92_RS01265	COG0183	Belongs to the thiolase family
ACP92_RS01270	COG1024	Enoyl-CoA hydratase
ACP92_RS01280	COG0840	transmembrane signaling receptor activity
ACP92_RS01285	COG3706	GGDEF domain
ACP92_RS01300	COG0280	phosphate acetyltransferase
ACP92_RS01305	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
ACP92_RS01310	COG3243	poly(R)-hydroxyalkanoic acid synthase
ACP92_RS01315	COG1309	transcriptional regulator
ACP92_RS01320	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ACP92_RS01325	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
ACP92_RS01335	COG0395	ABC-type sugar transport system, permease component
ACP92_RS01345	COG1653	transport
ACP92_RS01370	COG2814	Major facilitator Superfamily
ACP92_RS01405	COG4251	negative regulation of phosphorylation
ACP92_RS01405	COG3706	GGDEF domain
ACP92_RS01405	COG2203	Gaf domain
ACP92_RS01405	COG5001	Diguanylate cyclase
ACP92_RS01435	COG0811	peptide transport
ACP92_RS01475	COG4221	oxidoreductase activity
ACP92_RS01480	COG0443	Heat shock 70 kDa protein
ACP92_RS01485	COG0656	L-ascorbic acid biosynthetic process
ACP92_RS01495	COG1032	radical SAM domain protein
ACP92_RS01500	COG3959	Transketolase, thiamine diphosphate binding domain
ACP92_RS01505	COG3958	Transketolase
ACP92_RS01520	COG3210	domain, Protein
ACP92_RS01535	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
ACP92_RS01545	COG0659	secondary active sulfate transmembrane transporter activity
ACP92_RS01565	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ACP92_RS01570	COG0657	acetylesterase activity
ACP92_RS01580	COG2207	Transcriptional regulator
ACP92_RS01585	COG0667	Aldo Keto reductase
ACP92_RS01605	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
ACP92_RS01620	COG2001	Belongs to the MraZ family
ACP92_RS01625	COG0275	rRNA processing
ACP92_RS01640	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
ACP92_RS01645	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
ACP92_RS01650	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
ACP92_RS01655	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
ACP92_RS01665	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
ACP92_RS01670	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
ACP92_RS01675	COG1181	Belongs to the D-alanine--D-alanine ligase family
ACP92_RS01680	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
ACP92_RS01690	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
ACP92_RS01695	COG0678	peroxiredoxin activity
ACP92_RS01700	COG0774	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
ACP92_RS01710	COG0741	lytic transglycosylase activity
ACP92_RS01710	COG1196	nuclear chromosome segregation
ACP92_RS01710	COG0739	heme binding
ACP92_RS01715	COG0653	protein targeting
ACP92_RS01730	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
ACP92_RS01740	COG0494	nUDIX hydrolase
ACP92_RS01745	COG3024	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
ACP92_RS01750	COG4582	Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity
ACP92_RS01760	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
ACP92_RS01765	COG1459	type II secretion system
ACP92_RS01775	COG4536	flavin adenine dinucleotide binding
ACP92_RS01780	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
ACP92_RS01795	COG0142	geranyltranstransferase activity
ACP92_RS01800	COG0261	This protein binds to 23S rRNA in the presence of protein L20
ACP92_RS01805	COG0211	Belongs to the bacterial ribosomal protein bL27 family
ACP92_RS01810	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
ACP92_RS01815	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
ACP92_RS01825	COG0494	nUDIX hydrolase
ACP92_RS01830	COG0442	prolyl-tRNA aminoacylation
ACP92_RS01850	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
ACP92_RS01855	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
ACP92_RS01860	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
ACP92_RS01900	COG0762	integral membrane protein
ACP92_RS01910	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
ACP92_RS01920	COG2264	protein methyltransferase activity
ACP92_RS01925	COG0439	Biotin carboxylase
ACP92_RS01930	COG0511	ligase activity, forming carbon-carbon bonds
ACP92_RS01935	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
ACP92_RS01940	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
ACP92_RS01955	COG0840	transmembrane signaling receptor activity
ACP92_RS01965	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
ACP92_RS01970	COG3150	esterase
ACP92_RS01975	COG3161	chorismate lyase activity
ACP92_RS01980	COG0557	exoribonuclease II activity
ACP92_RS01990	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
ACP92_RS01995	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
ACP92_RS02010	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
ACP92_RS02020	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
ACP92_RS02025	COG1490	D-aminoacyl-tRNA deacylase activity
ACP92_RS02045	COG3550	peptidyl-serine autophosphorylation
ACP92_RS02055	COG2901	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters
ACP92_RS02060	COG0138	bifunctional purine biosynthesis protein purh
ACP92_RS02080	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
ACP92_RS02085	COG2354	Protein conserved in bacteria
ACP92_RS02090	COG0632	four-way junction helicase activity
ACP92_RS02095	COG2255	four-way junction helicase activity
ACP92_RS02105	COG1671	Belongs to the UPF0178 family
ACP92_RS02115	COG0525	valine-tRNA ligase activity
ACP92_RS02120	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
ACP92_RS02130	COG2022	thiamine diphosphate biosynthetic process
ACP92_RS02135	COG0351	phosphomethylpyrimidine kinase
ACP92_RS02140	COG0352	thiamine-phosphate diphosphorylase activity
ACP92_RS02145	COG0783	Belongs to the Dps family
ACP92_RS02160	COG0210	DNA helicase
ACP92_RS02170	COG0583	DNA-binding transcription factor activity
ACP92_RS02195	COG1175	transmembrane transport
ACP92_RS02210	COG3842	ATPase activity
ACP92_RS02215	COG0246	Mannitol dehydrogenase
ACP92_RS02220	COG1070	Carbohydrate kinase
ACP92_RS02230	COG0840	transmembrane signaling receptor activity
ACP92_RS02240	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
ACP92_RS02255	COG1611	Belongs to the LOG family
ACP92_RS02265	COG0840	transmembrane signaling receptor activity
ACP92_RS02270	COG0412	Dienelactone hydrolase
ACP92_RS02305	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
ACP92_RS02315	COG1678	Uncharacterized ACR, COG1678
ACP92_RS02320	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
ACP92_RS02325	COG2065	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
ACP92_RS02330	COG0540	Belongs to the ATCase OTCase family
ACP92_RS02350	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
ACP92_RS02360	COG0859	PFAM glycosyl transferase family 9
ACP92_RS02410	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
ACP92_RS02415	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ACP92_RS02420	COG1309	transcriptional regulator
ACP92_RS02430	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
ACP92_RS02435	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
ACP92_RS02440	COG1309	transcriptional regulator
ACP92_RS02455	COG1968	undecaprenyl-diphosphatase activity
ACP92_RS02460	COG1968	undecaprenyl-diphosphatase activity
ACP92_RS02465	COG0514	ATP-dependent DNA helicase (RecQ)
ACP92_RS02470	COG0220	tRNA (guanine-N7-)-methyltransferase activity
ACP92_RS02500	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
ACP92_RS02505	COG1278	Cold shock
ACP92_RS02515	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
ACP92_RS02525	COG0518	GMP synthase (glutamine-hydrolyzing) activity
ACP92_RS02525	COG0519	Catalyzes the synthesis of GMP from XMP
ACP92_RS02530	COG0583	DNA-binding transcription factor activity
ACP92_RS02535	COG1028	Short-chain dehydrogenase reductase Sdr
ACP92_RS02540	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
ACP92_RS02545	COG2860	membrane
ACP92_RS02555	COG0840	transmembrane signaling receptor activity
ACP92_RS02570	COG0500	methyltransferase
ACP92_RS02575	COG2199	diguanylate cyclase activity
ACP92_RS02605	COG0583	DNA-binding transcription factor activity
ACP92_RS02635	COG0583	DNA-binding transcription factor activity
ACP92_RS02640	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
ACP92_RS02645	COG2271	Major facilitator Superfamily
ACP92_RS02650	COG0129	dihydroxy-acid dehydratase activity
ACP92_RS02655	COG0628	permease
ACP92_RS02660	COG4774	siderophore transport
ACP92_RS02665	COG0346	lactoylglutathione lyase activity
ACP92_RS02670	COG0583	DNA-binding transcription factor activity
ACP92_RS02675	COG2814	Major facilitator Superfamily
ACP92_RS02680	COG0840	transmembrane signaling receptor activity
ACP92_RS02725	COG0784	Response regulator, receiver
ACP92_RS02725	COG4191	Histidine kinase
ACP92_RS02730	COG5001	Diguanylate cyclase
ACP92_RS02730	COG3300	MHYT domain
ACP92_RS02740	COG3685	Protein conserved in bacteria
ACP92_RS02745	COG3546	catalase activity
ACP92_RS02760	COG3685	Protein conserved in bacteria
ACP92_RS02795	COG1063	alcohol dehydrogenase
ACP92_RS02810	COG1285	pathogenesis
ACP92_RS02825	COG2226	methyltransferase
ACP92_RS02830	COG1733	regulation of RNA biosynthetic process
ACP92_RS02835	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
ACP92_RS02845	COG3653	N-Acyl-D-aspartate D-glutamate deacylase
ACP92_RS02850	COG0154	amidase activity
ACP92_RS02855	COG3653	N-Acyl-D-aspartate D-glutamate deacylase
ACP92_RS02860	COG2271	Major facilitator Superfamily
ACP92_RS02865	COG0583	DNA-binding transcription factor activity
ACP92_RS02875	COG1733	regulation of RNA biosynthetic process
ACP92_RS02900	COG0004	ammonium transporteR
ACP92_RS02910	COG1414	Transcriptional regulator
ACP92_RS02915	COG1028	Short-chain dehydrogenase reductase Sdr
ACP92_RS02920	COG2271	Major facilitator Superfamily
ACP92_RS02925	COG1028	Short-chain dehydrogenase reductase Sdr
ACP92_RS02935	COG0583	DNA-binding transcription factor activity
ACP92_RS02940	COG3384	dioxygenase
ACP92_RS02960	COG1981	membrane
ACP92_RS02965	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
ACP92_RS02980	COG0495	leucyl-tRNA aminoacylation
ACP92_RS02985	COG1609	Transcriptional regulator
ACP92_RS02995	COG4208	sulfate ABC transporter
ACP92_RS03005	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
ACP92_RS03010	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
ACP92_RS03030	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
ACP92_RS03035	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
ACP92_RS03040	COG0735	belongs to the Fur family
ACP92_RS03045	COG1420	regulation of RNA biosynthetic process
ACP92_RS03055	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
ACP92_RS03060	COG0497	DNA recombination
ACP92_RS03065	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
ACP92_RS03070	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
ACP92_RS03075	COG0443	Heat shock 70 kDa protein
ACP92_RS03080	COG0484	heat shock protein binding
ACP92_RS03085	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
ACP92_RS03090	COG1428	Deoxynucleoside kinase
ACP92_RS03115	COG0840	transmembrane signaling receptor activity
ACP92_RS03115	COG3290	protein histidine kinase activity
ACP92_RS03130	COG2201	protein-glutamate methylesterase activity
ACP92_RS03145	COG0617	tRNA 3'-terminal CCA addition
ACP92_RS03155	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
ACP92_RS03160	COG0628	permease
ACP92_RS03180	COG2308	Evidence 4 Homologs of previously reported genes of
ACP92_RS03205	COG2308	Evidence 4 Homologs of previously reported genes of
ACP92_RS03205	COG2307	Protein conserved in bacteria
ACP92_RS03210	COG1305	Transglutaminase-like
ACP92_RS03215	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
ACP92_RS03225	COG0642	Histidine kinase
ACP92_RS03245	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
ACP92_RS03250	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
ACP92_RS03255	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
ACP92_RS03265	COG0457	Tetratricopeptide repeat
ACP92_RS03285	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
ACP92_RS03290	COG0861	Integral membrane protein TerC family
ACP92_RS03295	COG4969	Belongs to the N-Me-Phe pilin family
ACP92_RS03300	COG0315	cyclic pyranopterin monophosphate synthase activity
ACP92_RS03305	COG4783	chaperone-mediated protein folding
ACP92_RS03315	COG0429	hydrolase of the alpha beta-hydrolase fold
ACP92_RS03345	COG0126	phosphoglycerate kinase activity
ACP92_RS03350	COG0469	pyruvate kinase activity
ACP92_RS03360	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
ACP92_RS03365	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
ACP92_RS03370	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
ACP92_RS03375	COG0009	L-threonylcarbamoyladenylate synthase
ACP92_RS03385	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
ACP92_RS03390	COG2755	lipolytic protein G-D-S-L family
ACP92_RS03390	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
ACP92_RS03395	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
ACP92_RS03400	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
ACP92_RS03405	COG0259	pyridoxamine-phosphate oxidase activity
ACP92_RS03410	COG2353	YceI-like domain
ACP92_RS03470	COG0482	sulfurtransferase activity
ACP92_RS03485	COG0853	Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
ACP92_RS03505	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
ACP92_RS03510	COG0006	proline dipeptidase activity
ACP92_RS03515	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
ACP92_RS03525	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
ACP92_RS03530	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
ACP92_RS03535	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
ACP92_RS03540	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
ACP92_RS03555	COG0038	chloride channel
ACP92_RS03575	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
ACP92_RS03580	COG0751	glycine-tRNA ligase activity
ACP92_RS03585	COG0752	glycyl-tRNA synthetase alpha subunit
ACP92_RS03590	COG0815	Transfers the fatty acyl group on membrane lipoproteins
ACP92_RS03595	COG4535	Mg2 and Co2 transporter CorC
ACP92_RS03605	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
ACP92_RS03610	COG1702	phosphate starvation-inducible protein PhoH
ACP92_RS03615	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
ACP92_RS03620	COG0583	DNA-binding transcription factor activity
ACP92_RS03625	COG1335	isochorismatase
ACP92_RS03635	COG1879	ABC-type sugar transport system periplasmic component
ACP92_RS03640	COG1129	ABC transporter
ACP92_RS03645	COG1172	Belongs to the binding-protein-dependent transport system permease family
ACP92_RS03660	COG4251	negative regulation of phosphorylation
ACP92_RS03660	COG3706	GGDEF domain
ACP92_RS03660	COG2203	Gaf domain
ACP92_RS03660	COG5001	Diguanylate cyclase
ACP92_RS03665	COG0277	FAD linked oxidase domain protein
ACP92_RS03935	COG4789	Type iii secretion
ACP92_RS03970	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
ACP92_RS03980	COG4794	Type iii secretion
ACP92_RS03990	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
ACP92_RS04080	COG0741	lytic transglycosylase activity
ACP92_RS04140	COG1473	amidohydrolase
ACP92_RS04145	COG2066	Belongs to the glutaminase family
ACP92_RS04175	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
ACP92_RS04180	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
ACP92_RS04190	COG2200	EAL domain
ACP92_RS04190	COG2199	diguanylate cyclase activity
ACP92_RS04190	COG2202	Pas domain
ACP92_RS04195	COG0586	Pfam SNARE associated Golgi protein
ACP92_RS04200	COG0860	N-Acetylmuramoyl-L-alanine amidase
ACP92_RS04205	COG0802	atpase or kinase
ACP92_RS04210	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
ACP92_RS04220	COG4566	intracellular signal transduction
ACP92_RS04255	COG4974	Belongs to the 'phage' integrase family
ACP92_RS04260	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
ACP92_RS04265	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
ACP92_RS04270	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
ACP92_RS04275	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
ACP92_RS04290	COG0534	Mate efflux family protein
ACP92_RS04300	COG0254	rRNA binding
ACP92_RS04305	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
ACP92_RS04320	COG1074	ATP-dependent DNA helicase activity
ACP92_RS04330	COG2170	ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity
ACP92_RS04335	COG2081	HI0933 family
ACP92_RS04340	COG0828	Belongs to the bacterial ribosomal protein bS21 family
ACP92_RS04355	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
ACP92_RS04545	COG4695	Portal protein
ACP92_RS04550	COG0745	RESPONSE REGULATOR receiver
ACP92_RS04600	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
ACP92_RS04610	COG0183	Belongs to the thiolase family
ACP92_RS04615	COG1960	acyl-CoA dehydrogenase activity
ACP92_RS04665	COG1960	acyl-CoA dehydrogenase activity
ACP92_RS04675	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
ACP92_RS04680	COG2207	Transcriptional regulator
ACP92_RS04705	COG0583	DNA-binding transcription factor activity
ACP92_RS04725	COG3829	transcription factor binding
ACP92_RS04740	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
ACP92_RS04775	COG0583	DNA-binding transcription factor activity
ACP92_RS04785	COG1012	belongs to the aldehyde dehydrogenase family
ACP92_RS04795	COG0471	metal ion transport
ACP92_RS04820	COG3842	ATPase activity
ACP92_RS04825	COG3842	ATPase activity
ACP92_RS04835	COG0395	ABC-type sugar transport system, permease component
ACP92_RS04850	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
ACP92_RS04865	COG2223	nitrite transmembrane transporter activity
ACP92_RS04870	COG2207	Transcriptional regulator
ACP92_RS04880	COG1960	acyl-CoA dehydrogenase activity
ACP92_RS04885	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
ACP92_RS04885	COG2755	lipolytic protein G-D-S-L family
ACP92_RS04905	COG4681	YaeQ
ACP92_RS04920	COG2951	lytic endotransglycosylase activity
ACP92_RS04925	COG0123	including yeast histone deacetylase and acetoin utilization protein
ACP92_RS04935	COG0477	Major facilitator Superfamily
ACP92_RS04950	COG2011	ABC-type metal ion transport system permease component
ACP92_RS04955	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
ACP92_RS04960	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
ACP92_RS04965	COG0459	protein refolding
ACP92_RS04970	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
ACP92_RS05020	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
ACP92_RS05045	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
ACP92_RS05060	COG1172	Belongs to the binding-protein-dependent transport system permease family
ACP92_RS05065	COG1129	ABC transporter
ACP92_RS05075	COG1172	Belongs to the binding-protein-dependent transport system permease family
ACP92_RS05080	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
ACP92_RS05085	COG4154	Belongs to the RbsD FucU family
ACP92_RS05090	COG1012	belongs to the aldehyde dehydrogenase family
ACP92_RS05095	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
ACP92_RS05100	COG1349	DNA-binding transcription factor activity
ACP92_RS05105	COG0024	Methionine aminopeptidase
ACP92_RS05110	COG0697	spore germination
ACP92_RS05115	COG1846	Transcriptional regulator
ACP92_RS05120	COG2223	nitrite transmembrane transporter activity
ACP92_RS05125	COG4948	Mandelate Racemase Muconate Lactonizing
ACP92_RS05130	COG0800	Aldolase
ACP92_RS05135	COG3734	2-keto-3-deoxy-galactonokinase
ACP92_RS05145	COG1879	ABC-type sugar transport system periplasmic component
ACP92_RS05150	COG1129	ABC transporter
ACP92_RS05155	COG1172	Belongs to the binding-protein-dependent transport system permease family
ACP92_RS05160	COG1172	Belongs to the binding-protein-dependent transport system permease family
ACP92_RS05165	COG4213	ABC transporter substrate-binding protein
ACP92_RS05175	COG4214	carbohydrate transport
ACP92_RS05210	COG4948	Mandelate Racemase Muconate Lactonizing
ACP92_RS05215	COG1028	Short-chain dehydrogenase reductase Sdr
ACP92_RS05230	COG1172	Belongs to the binding-protein-dependent transport system permease family
ACP92_RS05245	COG1309	transcriptional regulator
ACP92_RS05260	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
ACP92_RS05270	COG0300	oxidoreductase activity
ACP92_RS05290	COG1879	ABC-type sugar transport system periplasmic component
ACP92_RS05295	COG1129	ABC transporter
ACP92_RS05300	COG1172	Belongs to the binding-protein-dependent transport system permease family
ACP92_RS05315	COG1028	Short-chain dehydrogenase reductase Sdr
ACP92_RS05345	COG0625	glutathione transferase activity
ACP92_RS05355	COG0583	DNA-binding transcription factor activity
ACP92_RS05375	COG1177	transmembrane transport
ACP92_RS05380	COG1176	ABC-type spermidine putrescine transport system, permease component I
ACP92_RS05390	COG3842	ATPase activity
ACP92_RS05395	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
ACP92_RS05410	COG1253	flavin adenine dinucleotide binding
ACP92_RS05430	COG0405	Gamma-glutamyltransferase
ACP92_RS05435	COG1609	Transcriptional regulator
ACP92_RS05450	COG1028	Short-chain dehydrogenase reductase Sdr
ACP92_RS05455	COG1063	alcohol dehydrogenase
ACP92_RS05460	COG0840	transmembrane signaling receptor activity
ACP92_RS05470	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
ACP92_RS05475	COG1737	Transcriptional regulator
ACP92_RS05480	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
ACP92_RS05485	COG0166	Belongs to the GPI family
ACP92_RS05490	COG0129	dihydroxy-acid dehydratase activity
ACP92_RS05495	COG0800	Aldolase
ACP92_RS05500	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
ACP92_RS05505	COG0583	DNA-binding transcription factor activity
ACP92_RS05510	COG4654	Cytochrome c, class I
ACP92_RS05515	COG3958	Transketolase
ACP92_RS05520	COG3959	Transketolase, thiamine diphosphate binding domain
ACP92_RS05525	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
ACP92_RS05530	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
ACP92_RS05535	COG1028	Short-chain dehydrogenase reductase Sdr
ACP92_RS05540	COG0583	DNA-binding transcription factor activity
ACP92_RS05550	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
ACP92_RS05555	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
ACP92_RS05570	COG2814	Major facilitator Superfamily
ACP92_RS05575	COG3508	Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate
ACP92_RS05585	COG0625	glutathione transferase activity
ACP92_RS05590	COG2030	dehydratase
ACP92_RS05595	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
ACP92_RS05600	COG1522	sequence-specific DNA binding
ACP92_RS05605	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
ACP92_RS05610	COG0454	-acetyltransferase
ACP92_RS05615	COG1012	belongs to the aldehyde dehydrogenase family
ACP92_RS05620	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
ACP92_RS05625	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
ACP92_RS05640	COG0747	negative chemotaxis
ACP92_RS05645	COG0601	transmembrane transport
ACP92_RS05650	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
ACP92_RS05665	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
ACP92_RS05670	COG0583	DNA-binding transcription factor activity
ACP92_RS05685	COG1473	amidohydrolase
ACP92_RS05695	COG0840	transmembrane signaling receptor activity
ACP92_RS05700	COG4948	Mandelate Racemase Muconate Lactonizing
ACP92_RS05715	COG0281	malic enzyme
ACP92_RS05715	COG0280	phosphate acetyltransferase
ACP92_RS05725	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
ACP92_RS05735	COG1012	belongs to the aldehyde dehydrogenase family
ACP92_RS05760	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
ACP92_RS05765	COG1609	Transcriptional regulator
ACP92_RS05795	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
ACP92_RS05800	COG0765	amino acid transport
ACP92_RS05805	COG1126	abc transporter atp-binding protein
ACP92_RS05810	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
ACP92_RS05815	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
ACP92_RS05820	COG1570	exodeoxyribonuclease VII activity
ACP92_RS05825	COG0811	peptide transport
ACP92_RS05830	COG0848	biopolymer transport protein
ACP92_RS05835	COG1663	tetraacyldisaccharide 4'-kinase activity
ACP92_RS05840	COG2835	tetraacyldisaccharide 4'-kinase activity
ACP92_RS05845	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
ACP92_RS05850	COG0563	adenylate kinase activity
ACP92_RS05855	COG3808	pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for
ACP92_RS05880	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
ACP92_RS05885	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
ACP92_RS05885	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
ACP92_RS05890	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
ACP92_RS05895	COG0668	transmembrane transport
ACP92_RS05905	COG0267	Belongs to the bacterial ribosomal protein bL33 family
ACP92_RS05910	COG0227	Belongs to the bacterial ribosomal protein bL28 family
ACP92_RS05915	COG2003	Belongs to the UPF0758 family
ACP92_RS05920	COG1047	Peptidyl-prolyl cis-trans
ACP92_RS05925	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
ACP92_RS05965	COG2193	ferroxidase activity
ACP92_RS05970	COG3237	CsbD-like
ACP92_RS05980	COG2823	Periplasmic or secreted lipoprotein
ACP92_RS05990	COG2201	protein-glutamate methylesterase activity
ACP92_RS06025	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
ACP92_RS06035	COG1116	anion transmembrane transporter activity
ACP92_RS06045	COG2363	Small membrane protein
ACP92_RS06060	COG1715	Restriction endonuclease
ACP92_RS06080	COG0823	Involved in the tonB-independent uptake of proteins
ACP92_RS06100	COG0824	Thioesterase
ACP92_RS06105	COG4221	oxidoreductase activity
ACP92_RS06110	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
ACP92_RS06115	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
ACP92_RS06135	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
ACP92_RS06140	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
ACP92_RS06145	COG0343	queuine tRNA-ribosyltransferase activity
ACP92_RS06150	COG2205	protein histidine kinase activity
ACP92_RS06155	COG2197	response regulator
ACP92_RS06185	COG1862	Preprotein translocase
ACP92_RS06195	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
ACP92_RS06200	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
ACP92_RS06205	COG0697	spore germination
ACP92_RS06230	COG1864	DNA RNA non-specific endonuclease
ACP92_RS06230	COG3591	Belongs to the peptidase S1B family
ACP92_RS06235	COG1028	Short-chain dehydrogenase reductase Sdr
ACP92_RS06250	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
ACP92_RS06250	COG0438	transferase activity, transferring glycosyl groups
ACP92_RS06255	COG0840	transmembrane signaling receptor activity
ACP92_RS06260	COG0840	transmembrane signaling receptor activity
ACP92_RS06265	COG0840	transmembrane signaling receptor activity
ACP92_RS06280	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
ACP92_RS06285	COG0573	inorganic phosphate transmembrane transporter activity
ACP92_RS06295	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
ACP92_RS06300	COG0704	Plays a role in the regulation of phosphate uptake
ACP92_RS06320	COG1028	Short-chain dehydrogenase reductase Sdr
ACP92_RS06345	COG1804	L-carnitine dehydratase bile acid-inducible protein F
ACP92_RS06350	COG0372	Belongs to the citrate synthase family
ACP92_RS06370	COG0583	DNA-binding transcription factor activity
ACP92_RS06380	COG4772	TonB-dependent receptor
ACP92_RS06405	COG0531	amino acid
ACP92_RS06415	COG0477	Major facilitator Superfamily
ACP92_RS06440	COG0840	transmembrane signaling receptor activity
ACP92_RS06445	COG0583	DNA-binding transcription factor activity
ACP92_RS06485	COG1196	nuclear chromosome segregation
ACP92_RS06495	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
ACP92_RS06500	COG4829	muconolactone delta-isomerase
ACP92_RS06515	COG3485	protocatechuate 3,4-dioxygenase
ACP92_RS06535	COG1028	Short-chain dehydrogenase reductase Sdr
ACP92_RS06540	COG0251	oxidation-reduction process
ACP92_RS06545	COG2814	Major facilitator Superfamily
ACP92_RS06550	COG3135	benzoate transporter
ACP92_RS06555	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
ACP92_RS06560	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
ACP92_RS06575	COG4117	Thiosulfate reductase cytochrome B subunit (Membrane anchoring protein)
ACP92_RS06580	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
ACP92_RS06585	COG1529	Aldehyde oxidase and xanthine dehydrogenase
ACP92_RS06585	COG2010	Cytochrome c
ACP92_RS06590	COG2080	2 iron, 2 sulfur cluster binding
ACP92_RS06595	COG3473	Maleate cis-trans isomerase
ACP92_RS06600	COG0596	Alpha beta hydrolase
ACP92_RS06605	COG2309	aminopeptidase activity
ACP92_RS06610	COG1335	isochorismatase
ACP92_RS06615	COG1529	Aldehyde oxidase and xanthine dehydrogenase
ACP92_RS06615	COG2010	Cytochrome c
ACP92_RS06620	COG1846	Transcriptional regulator
ACP92_RS06630	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
ACP92_RS06635	COG0840	transmembrane signaling receptor activity
ACP92_RS06645	COG3608	succinylglutamate desuccinylase aspartoacylase
ACP92_RS06645	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
ACP92_RS06655	COG0477	Major facilitator Superfamily
ACP92_RS06665	COG0840	transmembrane signaling receptor activity
ACP92_RS06670	COG4566	intracellular signal transduction
ACP92_RS06690	COG4638	Rieske (2fe-2S)
ACP92_RS06695	COG0154	amidase activity
ACP92_RS06710	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
ACP92_RS06720	COG4191	Histidine kinase
ACP92_RS06735	COG1028	Short-chain dehydrogenase reductase Sdr
ACP92_RS06750	COG0411	ABC transporter
ACP92_RS06760	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
ACP92_RS06765	COG0235	Class ii aldolase
ACP92_RS06775	COG1309	transcriptional regulator
ACP92_RS06785	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
ACP92_RS06810	COG0840	transmembrane signaling receptor activity
ACP92_RS06815	COG2203	Gaf domain
ACP92_RS06815	COG2199	diguanylate cyclase activity
ACP92_RS06815	COG2200	EAL domain
ACP92_RS06825	COG0745	RESPONSE REGULATOR receiver
ACP92_RS06825	COG4191	Histidine kinase
ACP92_RS06825	COG2205	protein histidine kinase activity
ACP92_RS06830	COG2205	protein histidine kinase activity
ACP92_RS06830	COG0745	RESPONSE REGULATOR receiver
ACP92_RS06830	COG3292	Two component regulator propeller
ACP92_RS06865	COG1739	Uncharacterized protein family UPF0029
ACP92_RS06875	COG1752	Esterase of the alpha-beta hydrolase superfamily
ACP92_RS06880	COG0791	NLP P60 protein
ACP92_RS06885	COG3193	protein, possibly involved in utilization of glycolate and propanediol
ACP92_RS06890	COG0505	Belongs to the CarA family
ACP92_RS06895	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
ACP92_RS06900	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
ACP92_RS06905	COG1534	Rna-binding protein
ACP92_RS06910	COG0293	Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit
ACP92_RS06915	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
ACP92_RS06920	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
ACP92_RS06925	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
ACP92_RS06950	COG0488	(ABC) transporter
ACP92_RS06960	COG0728	peptidoglycan biosynthetic process
ACP92_RS06965	COG0268	Binds directly to 16S ribosomal RNA
ACP92_RS06985	COG1278	Cold shock
ACP92_RS06990	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
ACP92_RS06995	COG0542	response to heat
ACP92_RS07005	COG0756	dUTP diphosphatase activity
ACP92_RS07010	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
ACP92_RS07015	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
ACP92_RS07020	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
ACP92_RS07025	COG0196	riboflavin kinase activity
ACP92_RS07030	COG1802	Transcriptional regulator
ACP92_RS07045	COG3845	ABC transporter
ACP92_RS07050	COG1335	isochorismatase
ACP92_RS07055	COG1079	Belongs to the binding-protein-dependent transport system permease family
ACP92_RS07075	COG1385	rRNA (uridine-N3-)-methyltransferase activity
ACP92_RS07090	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
ACP92_RS07100	COG2226	methyltransferase
ACP92_RS07105	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
ACP92_RS07115	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
ACP92_RS07120	COG0312	modulator of DNA gyrase
ACP92_RS07125	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
ACP92_RS07130	COG1666	GTP binding
ACP92_RS07135	COG0812	UDP-N-acetylmuramate dehydrogenase activity
ACP92_RS07140	COG3123	guanosine phosphorylase activity
ACP92_RS07145	COG0137	argininosuccinate synthase activity
ACP92_RS07150	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
ACP92_RS07160	COG1162	GTPase activity
ACP92_RS07165	COG2154	pterin-4-alpha-carbinolamine dehydratase
ACP92_RS07170	COG0501	Belongs to the peptidase M48B family
ACP92_RS07175	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
ACP92_RS07180	COG3318	Belongs to the UPF0149 family
ACP92_RS07180	COG3012	SEC-C Motif Domain Protein
ACP92_RS07185	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
ACP92_RS07190	COG0519	Catalyzes the synthesis of GMP from XMP
ACP92_RS07195	COG1674	ftsk spoiiie
ACP92_RS07195	COG1674	ftsk spoiiie
ACP92_RS07205	COG1295	ribonuclease BN
ACP92_RS07210	COG0243	molybdopterin cofactor binding
ACP92_RS07240	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
ACP92_RS07260	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
ACP92_RS07265	COG2918	glutathione biosynthetic process
ACP92_RS07270	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
ACP92_RS07275	COG0508	dehydrogenase complex catalyzes the overall conversion of
ACP92_RS07280	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
ACP92_RS07290	COG0840	transmembrane signaling receptor activity
ACP92_RS07305	COG0583	DNA-binding transcription factor activity
ACP92_RS07355	COG0473	3-isopropylmalate dehydrogenase activity
ACP92_RS07360	COG0676	glucose-6-phosphate 1-epimerase activity
ACP92_RS07365	COG0583	DNA-binding transcription factor activity
ACP92_RS07375	COG1910	domain protein
ACP92_RS07380	COG2223	nitrite transmembrane transporter activity
ACP92_RS07395	COG3383	formate dehydrogenase (NAD+) activity
ACP92_RS07400	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
ACP92_RS07415	COG0583	DNA-binding transcription factor activity
ACP92_RS07425	COG2329	Antibiotic biosynthesis monooxygenase
ACP92_RS07430	COG0596	Alpha beta hydrolase
ACP92_RS07430	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
ACP92_RS07440	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
ACP92_RS07445	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
ACP92_RS07445	COG1116	anion transmembrane transporter activity
ACP92_RS07480	COG1609	Transcriptional regulator
ACP92_RS07490	COG0765	amino acid transport
ACP92_RS07495	COG0765	amino acid transport
ACP92_RS07510	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
ACP92_RS07515	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
ACP92_RS07530	COG1960	acyl-CoA dehydrogenase activity
ACP92_RS07540	COG0228	four-way junction DNA binding
ACP92_RS07545	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
ACP92_RS07550	COG0336	Belongs to the RNA methyltransferase TrmD family
ACP92_RS07555	COG0335	large ribosomal subunit rRNA binding
ACP92_RS07560	COG0494	nUDIX hydrolase
ACP92_RS07565	COG1270	Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group
ACP92_RS07575	COG0114	fumarate hydratase activity
ACP92_RS07615	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
ACP92_RS07620	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
ACP92_RS07630	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
ACP92_RS07635	COG0477	Major facilitator Superfamily
ACP92_RS07640	COG0697	spore germination
ACP92_RS07645	COG0598	Magnesium transport protein CorA
ACP92_RS07660	COG0601	transmembrane transport
ACP92_RS07665	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
ACP92_RS07670	COG4172	Belongs to the ABC transporter superfamily
ACP92_RS07680	COG3706	GGDEF domain
ACP92_RS07680	COG5001	Diguanylate cyclase
ACP92_RS07680	COG4251	negative regulation of phosphorylation
ACP92_RS07680	COG2203	Gaf domain
ACP92_RS07705	COG1733	regulation of RNA biosynthetic process
ACP92_RS07720	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
ACP92_RS07735	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
ACP92_RS07775	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
ACP92_RS07790	COG0840	transmembrane signaling receptor activity
ACP92_RS07810	COG2011	ABC-type metal ion transport system permease component
ACP92_RS07820	COG1104	cysteine desulfurase activity
ACP92_RS07825	COG0583	DNA-binding transcription factor activity
ACP92_RS07830	COG2072	flavoprotein involved in K transport
ACP92_RS07835	COG0601	transmembrane transport
ACP92_RS07845	COG0444	Belongs to the ABC transporter superfamily
ACP92_RS07850	COG4608	Belongs to the ABC transporter superfamily
ACP92_RS07860	COG0747	negative chemotaxis
ACP92_RS07885	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
ACP92_RS07890	COG0583	DNA-binding transcription factor activity
ACP92_RS07900	COG1045	serine acetyltransferase
ACP92_RS07915	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
ACP92_RS07920	COG3511	phospholipase C
ACP92_RS07940	COG0318	PFAM AMP-dependent synthetase and ligase
ACP92_RS07950	COG2132	Multicopper oxidase
ACP92_RS07975	COG2267	carboxylic ester hydrolase activity
ACP92_RS07985	COG2217	Heavy metal translocating P-type atpase
ACP92_RS08005	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
ACP92_RS08035	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
ACP92_RS08040	COG2878	Part of a membrane complex involved in electron transport
ACP92_RS08050	COG0492	ferredoxin-NADP+ reductase activity
ACP92_RS08055	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
ACP92_RS08065	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
ACP92_RS08120	COG0123	including yeast histone deacetylase and acetoin utilization protein
ACP92_RS08135	COG2226	methyltransferase
ACP92_RS08150	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
ACP92_RS08155	COG0431	NADPH-dependent FMN reductase
ACP92_RS08160	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
ACP92_RS08165	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
ACP92_RS08170	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
ACP92_RS08175	COG1116	anion transmembrane transporter activity
ACP92_RS08180	COG3585	molybdate ion transport
ACP92_RS08195	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
ACP92_RS08200	COG4208	sulfate ABC transporter
ACP92_RS08205	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
ACP92_RS08210	COG0583	DNA-binding transcription factor activity
ACP92_RS08305	COG1522	sequence-specific DNA binding
ACP92_RS08310	COG2169	Transcriptional regulator
ACP92_RS08310	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
ACP92_RS08320	COG3145	DNA-N1-methyladenine dioxygenase activity
ACP92_RS08340	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
ACP92_RS08350	COG0243	molybdopterin cofactor binding
ACP92_RS08360	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
ACP92_RS08370	COG1253	flavin adenine dinucleotide binding
ACP92_RS08415	COG0840	transmembrane signaling receptor activity
ACP92_RS08415	COG3290	protein histidine kinase activity
ACP92_RS08425	COG2201	protein-glutamate methylesterase activity
ACP92_RS08435	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
ACP92_RS08445	COG0784	Response regulator, receiver
ACP92_RS08445	COG2198	Histidine kinase
ACP92_RS08445	COG0643	Histidine kinase
ACP92_RS08455	COG0745	RESPONSE REGULATOR receiver
ACP92_RS08475	COG2199	diguanylate cyclase activity
ACP92_RS08475	COG2203	Gaf domain
ACP92_RS08475	COG2200	EAL domain
ACP92_RS08515	COG0583	DNA-binding transcription factor activity
ACP92_RS08530	COG0513	Belongs to the DEAD box helicase family
ACP92_RS08545	COG0483	inositol monophosphate 1-phosphatase activity
ACP92_RS08555	COG1187	pseudouridine synthase activity
ACP92_RS08570	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
ACP92_RS08580	COG2833	Protein of unknown function (DUF455)
ACP92_RS08590	COG1075	acetyltransferases and hydrolases with the alpha beta hydrolase fold
ACP92_RS08615	COG0028	Belongs to the TPP enzyme family
ACP92_RS08625	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
ACP92_RS08640	COG0688	phosphatidylethanolamine metabolic process
ACP92_RS08645	COG1183	phosphatidylcholine synthase activity
ACP92_RS08670	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
ACP92_RS08690	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
ACP92_RS08695	COG3653	N-Acyl-D-aspartate D-glutamate deacylase
ACP92_RS08715	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
ACP92_RS08720	COG1185	polyribonucleotide nucleotidyltransferase activity
ACP92_RS08725	COG1252	NADH dehydrogenase
ACP92_RS08745	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
ACP92_RS08750	COG1984	allophanate hydrolase subunit 2
ACP92_RS08755	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
ACP92_RS08770	COG0149	triose-phosphate isomerase activity
ACP92_RS08775	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
ACP92_RS08785	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
ACP92_RS08790	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
ACP92_RS08795	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
ACP92_RS08800	COG0649	NAD binding
ACP92_RS08815	COG1034	ATP synthesis coupled electron transport
ACP92_RS08820	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
ACP92_RS08825	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
ACP92_RS08835	COG0713	ATP synthesis coupled electron transport
ACP92_RS08850	COG1007	ATP synthesis coupled electron transport
ACP92_RS08860	COG0494	nUDIX hydrolase
ACP92_RS08915	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
ACP92_RS08920	COG1464	Belongs to the NlpA lipoprotein family
ACP92_RS08930	COG1028	Short-chain dehydrogenase reductase Sdr
ACP92_RS08970	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ACP92_RS09005	COG0697	spore germination
ACP92_RS09015	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
ACP92_RS09040	COG1942	4-Oxalocrotonate Tautomerase
ACP92_RS09090	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ACP92_RS09095	COG0842	Transport permease protein
ACP92_RS09095	COG1129	ABC transporter
ACP92_RS09100	COG0842	Transport permease protein
ACP92_RS09110	COG0741	lytic transglycosylase activity
ACP92_RS09135	COG0583	DNA-binding transcription factor activity
ACP92_RS09150	COG4172	Belongs to the ABC transporter superfamily
ACP92_RS09155	COG0747	negative chemotaxis
ACP92_RS09160	COG0601	transmembrane transport
ACP92_RS09190	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
ACP92_RS09195	COG1846	Transcriptional regulator
ACP92_RS09205	COG0400	carboxylic ester hydrolase activity
ACP92_RS09215	COG0521	Mo-molybdopterin cofactor biosynthetic process
ACP92_RS09220	COG3028	Belongs to the UPF0307 family
ACP92_RS09225	COG0312	modulator of DNA gyrase
ACP92_RS09235	COG0477	Major facilitator Superfamily
ACP92_RS09240	COG0415	Belongs to the DNA photolyase family
ACP92_RS09250	COG0557	exoribonuclease II activity
ACP92_RS09255	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
ACP92_RS09260	COG1045	serine acetyltransferase
ACP92_RS09265	COG2908	Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
ACP92_RS09270	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
ACP92_RS09275	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
ACP92_RS09290	COG0215	cysteine-tRNA ligase activity
ACP92_RS09300	COG0825	malonyl-CoA metabolic process
ACP92_RS09305	COG0037	tRNA processing
ACP92_RS09320	COG1280	lysine exporter protein (LysE YggA)
ACP92_RS09340	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
ACP92_RS09355	COG0303	'Molybdopterin
ACP92_RS09360	COG0746	molybdenum cofactor guanylyltransferase activity
ACP92_RS09365	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
ACP92_RS09370	COG1530	ribonuclease E activity
ACP92_RS09375	COG0564	pseudouridine synthase activity
ACP92_RS09400	COG0248	Ppx GppA phosphatase
ACP92_RS09405	COG1840	ABC-type Fe3 transport system, periplasmic component
ACP92_RS09425	COG1012	belongs to the aldehyde dehydrogenase family
ACP92_RS09435	COG3284	Transcriptional regulator
ACP92_RS09445	COG2840	Smr protein MutS2
ACP92_RS09455	COG0492	ferredoxin-NADP+ reductase activity
ACP92_RS09460	COG1674	ftsk spoiiie
ACP92_RS09465	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
ACP92_RS09475	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
ACP92_RS09480	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
ACP92_RS09495	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
ACP92_RS09500	COG5001	Diguanylate cyclase
ACP92_RS09500	COG3300	MHYT domain
ACP92_RS09535	COG0424	maF-like protein
ACP92_RS09545	COG0333	Belongs to the bacterial ribosomal protein bL32 family
ACP92_RS09550	COG0416	fatty acid biosynthetic process
ACP92_RS09555	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
ACP92_RS09565	COG1028	Short-chain dehydrogenase reductase Sdr
ACP92_RS09570	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
ACP92_RS09575	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
ACP92_RS09600	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
ACP92_RS09610	COG0481	GTPase activity
ACP92_RS09615	COG0681	Belongs to the peptidase S26 family
ACP92_RS09620	COG0571	ribonuclease III activity
ACP92_RS09625	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
ACP92_RS09630	COG1381	Involved in DNA repair and RecF pathway recombination
ACP92_RS09635	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
ACP92_RS09640	COG0736	holo-[acyl-carrier-protein] synthase activity
ACP92_RS09650	COG0322	excinuclease ABC activity
ACP92_RS09685	COG0842	Transport permease protein
ACP92_RS09690	COG1129	ABC transporter
ACP92_RS09690	COG0842	Transport permease protein
ACP92_RS09695	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ACP92_RS09700	COG1538	Outer membrane efflux protein
ACP92_RS09705	COG2205	protein histidine kinase activity
ACP92_RS09710	COG0745	RESPONSE REGULATOR receiver
ACP92_RS09715	COG0156	8-amino-7-oxononanoate synthase activity
ACP92_RS09730	COG0835	chemotaxis
ACP92_RS09730	COG0784	Response regulator, receiver
ACP92_RS09735	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
ACP92_RS09740	COG0368	Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate
ACP92_RS09760	COG1966	Carbon starvation protein
ACP92_RS09765	COG2879	small protein
ACP92_RS09775	COG0501	Belongs to the peptidase M48B family
ACP92_RS09780	COG4651	solute:proton antiporter activity
ACP92_RS09780	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
ACP92_RS09785	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
ACP92_RS09815	COG0251	oxidation-reduction process
ACP92_RS09820	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
ACP92_RS09845	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
ACP92_RS09850	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
ACP92_RS09855	COG0291	Belongs to the bacterial ribosomal protein bL35 family
ACP92_RS09860	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
ACP92_RS09865	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
ACP92_RS09870	COG0072	phenylalanine-tRNA ligase activity
ACP92_RS09870	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
ACP92_RS09875	COG0776	regulation of translation
ACP92_RS09900	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
ACP92_RS09920	COG0489	protein tyrosine kinase activity
ACP92_RS09940	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
ACP92_RS09940	COG2755	lipolytic protein G-D-S-L family
ACP92_RS09985	COG2244	polysaccharide biosynthetic process
ACP92_RS09990	COG0463	Glycosyl transferase, family 2
ACP92_RS10010	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
ACP92_RS10020	COG1929	Belongs to the glycerate kinase type-1 family
ACP92_RS10050	COG1309	transcriptional regulator
ACP92_RS10055	COG2084	Dehydrogenase
ACP92_RS10065	COG1230	cation diffusion facilitator family transporter
ACP92_RS10080	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
ACP92_RS10085	COG1871	Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis
ACP92_RS10090	COG2201	protein-glutamate methylesterase activity
ACP92_RS10095	COG0745	RESPONSE REGULATOR receiver
ACP92_RS10105	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
ACP92_RS10110	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
ACP92_RS10125	COG1191	sigma factor activity
ACP92_RS10145	COG1815	bacterial-type flagellum-dependent cell motility
ACP92_RS10155	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
ACP92_RS10160	COG1749	Flagellar hook protein flgE
ACP92_RS10165	COG4787	bacterial-type flagellum-dependent cell motility
ACP92_RS10175	COG2063	Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation
ACP92_RS10180	COG1706	bacterial-type flagellum-dependent cell motility
ACP92_RS10185	COG3951	Flagellar rod assembly protein muramidase FlgJ
ACP92_RS10185	COG1705	Flagellar rod assembly protein muramidase FlgJ
ACP92_RS10190	COG1256	bacterial-type flagellum assembly
ACP92_RS10195	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
ACP92_RS10200	COG1538	Outer membrane efflux protein
ACP92_RS10205	COG0577	efflux transmembrane transporter activity
ACP92_RS10205	COG1136	(ABC) transporter
ACP92_RS10210	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ACP92_RS10225	COG1338	Plays a role in the flagellum-specific transport system
ACP92_RS10230	COG3190	flagellar
ACP92_RS10235	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
ACP92_RS10245	COG1580	Controls the rotational direction of flagella during chemotaxis
ACP92_RS10260	COG1157	protein secretion by the type III secretion system
ACP92_RS10275	COG1766	The M ring may be actively involved in energy transduction
ACP92_RS10280	COG1677	Flagellar hook-basal body complex protein FliE
ACP92_RS10285	COG5581	Acts as a flagellar brake, regulating swimming and swarming in a bis-(3'-5') cyclic diguanylic acid (c-di-GMP)- dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility
ACP92_RS10290	COG2257	FlhB HrpN YscU SpaS Family
ACP92_RS10310	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
ACP92_RS10330	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
ACP92_RS10335	COG0360	Binds together with S18 to 16S ribosomal RNA
ACP92_RS10345	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
ACP92_RS10350	COG0359	binds to the 23S rRNA
ACP92_RS10355	COG0305	Participates in initiation and elongation during chromosome replication
ACP92_RS10365	COG0306	phosphate transporter
ACP92_RS10370	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
ACP92_RS10375	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
ACP92_RS10380	COG0726	polysaccharide deacetylase
ACP92_RS10385	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
ACP92_RS10385	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
ACP92_RS10390	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
ACP92_RS10390	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
ACP92_RS10395	COG0463	Glycosyl transferase, family 2
ACP92_RS10400	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
ACP92_RS10405	COG2076	Multidrug Resistance protein
ACP92_RS10420	COG0436	Aminotransferase
ACP92_RS10440	COG0303	'Molybdopterin
ACP92_RS10460	COG0314	molybdopterin synthase activity
ACP92_RS10465	COG1914	H( )-stimulated, divalent metal cation uptake system
ACP92_RS10480	COG1566	PFAM secretion protein HlyD family protein
ACP92_RS10500	COG0583	DNA-binding transcription factor activity
ACP92_RS10505	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
ACP92_RS10510	COG0542	response to heat
ACP92_RS10515	COG3706	GGDEF domain
ACP92_RS10520	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
ACP92_RS10525	COG1289	transmembrane transporter activity
ACP92_RS10530	COG2224	Isocitrate lyase
ACP92_RS10540	COG4149	molybdate abc transporter
ACP92_RS10545	COG0725	ABC transporter, periplasmic molybdate-binding protein
ACP92_RS10555	COG0038	chloride channel
ACP92_RS10560	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
ACP92_RS10565	COG3434	signal transduction protein containing EAL and modified HD-GYP domains
ACP92_RS10590	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
ACP92_RS10595	COG0583	DNA-binding transcription factor activity
ACP92_RS10600	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
ACP92_RS10605	COG1758	RNA polymerase activity
ACP92_RS10615	COG1561	YicC-like family, N-terminal region
ACP92_RS10620	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
ACP92_RS10625	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
ACP92_RS10630	COG0635	Involved in the biosynthesis of porphyrin-containing compound
ACP92_RS10645	COG2032	superoxide dismutase activity
ACP92_RS10660	COG0527	aspartate kinase activity
ACP92_RS10670	COG0583	DNA-binding transcription factor activity
ACP92_RS10680	COG1214	PFAM Peptidase M22, glycoprotease
ACP92_RS10690	COG1573	uracil-dna glycosylase
ACP92_RS10700	COG2814	Major facilitator Superfamily
ACP92_RS10705	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
ACP92_RS10735	COG0765	amino acid transport
ACP92_RS10740	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
ACP92_RS10745	COG0488	(ABC) transporter
ACP92_RS10750	COG2890	protein-(glutamine-N5) methyltransferase activity
ACP92_RS10755	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
ACP92_RS10760	COG1393	Belongs to the ArsC family
ACP92_RS10765	COG2171	N-acyltransferase activity
ACP92_RS10775	COG0840	transmembrane signaling receptor activity
ACP92_RS10790	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
ACP92_RS10795	COG1210	Utp--glucose-1-phosphate uridylyltransferase
ACP92_RS10800	COG0242	peptide deformylase activity
ACP92_RS10805	COG0189	ligase activity
ACP92_RS10805	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
ACP92_RS10810	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
ACP92_RS10810	COG1181	Belongs to the D-alanine--D-alanine ligase family
ACP92_RS10815	COG1132	(ABC) transporter
ACP92_RS10825	COG1187	pseudouridine synthase activity
ACP92_RS10830	COG2844	Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen
ACP92_RS10835	COG0024	Methionine aminopeptidase
ACP92_RS10840	COG0052	Belongs to the universal ribosomal protein uS2 family
ACP92_RS10845	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
ACP92_RS10850	COG0528	UMP kinase activity
ACP92_RS10855	COG0233	cytoplasmic translational termination
ACP92_RS10860	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
ACP92_RS10865	COG0575	Belongs to the CDS family
ACP92_RS10870	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
ACP92_RS10875	COG0750	zinc metalloprotease
ACP92_RS10890	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
ACP92_RS10895	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
ACP92_RS10900	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
ACP92_RS10910	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
ACP92_RS10915	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
ACP92_RS10925	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
ACP92_RS10940	COG0330	HflC and HflK could
ACP92_RS10950	COG2205	protein histidine kinase activity
ACP92_RS10955	COG0745	RESPONSE REGULATOR receiver
ACP92_RS10965	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
ACP92_RS10975	COG2914	Belongs to the UPF0125 (RnfH) family
ACP92_RS10980	COG0516	GMP reductase activity
ACP92_RS10980	COG0517	IMP dehydrogenase activity
ACP92_RS10985	COG0519	Catalyzes the synthesis of GMP from XMP
ACP92_RS10985	COG0518	GMP synthase (glutamine-hydrolyzing) activity
ACP92_RS11000	COG0602	queuosine metabolic process
ACP92_RS11005	COG0720	synthase
ACP92_RS11015	COG1619	proteins homologs of microcin C7 resistance protein MccF
ACP92_RS11025	COG0488	(ABC) transporter
ACP92_RS11030	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
ACP92_RS11045	COG1752	Esterase of the alpha-beta hydrolase superfamily
ACP92_RS11050	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
ACP92_RS11055	COG0027	Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
ACP92_RS11060	COG4691	Plasmid stability protein
ACP92_RS11065	COG1487	ribonuclease activity
ACP92_RS11080	COG2851	Citrate transporter
ACP92_RS11085	COG0583	DNA-binding transcription factor activity
ACP92_RS11090	COG0477	Major facilitator Superfamily
ACP92_RS11100	COG1840	ABC-type Fe3 transport system, periplasmic component
ACP92_RS11105	COG4149	molybdate abc transporter
ACP92_RS11110	COG3842	ATPase activity
ACP92_RS11120	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
ACP92_RS11135	COG4181	ATPase activity
ACP92_RS11145	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
ACP92_RS11145	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
ACP92_RS11150	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
ACP92_RS11155	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
ACP92_RS11155	COG0047	phosphoribosylformylglycinamidine synthase activity
ACP92_RS11160	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
ACP92_RS11165	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
ACP92_RS11175	COG2917	probably involved in intracellular septation
ACP92_RS11180	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
ACP92_RS11185	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
ACP92_RS11215	COG2271	Major facilitator Superfamily
ACP92_RS11240	COG3706	GGDEF domain
ACP92_RS11245	COG0587	DNA-directed DNA polymerase activity
ACP92_RS11300	COG0693	protein deglycase activity
ACP92_RS11315	COG0028	Belongs to the TPP enzyme family
ACP92_RS11320	COG1273	With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD
ACP92_RS11330	COG0322	excinuclease ABC activity
ACP92_RS11340	COG0412	Dienelactone hydrolase
ACP92_RS11345	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
ACP92_RS11355	COG1201	RNA secondary structure unwinding
ACP92_RS11360	COG1793	dna ligase
ACP92_RS11365	COG1793	dna ligase
ACP92_RS11365	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
ACP92_RS11395	COG1802	Transcriptional regulator
ACP92_RS11405	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
ACP92_RS11410	COG0765	amino acid transport
ACP92_RS11415	COG1126	abc transporter atp-binding protein
ACP92_RS11420	COG0402	S-adenosylhomocysteine deaminase activity
ACP92_RS11425	COG0589	response to stress
ACP92_RS11430	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
ACP92_RS11445	COG1879	ABC-type sugar transport system periplasmic component
ACP92_RS11450	COG1129	ABC transporter
ACP92_RS11455	COG1172	Belongs to the binding-protein-dependent transport system permease family
ACP92_RS11460	COG1609	Transcriptional regulator
ACP92_RS11465	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
ACP92_RS11470	COG1869	D-ribose catabolic process
ACP92_RS11480	COG2982	Protein involved in outer membrane biogenesis
ACP92_RS11505	COG1028	Short-chain dehydrogenase reductase Sdr
ACP92_RS11510	COG1546	Belongs to the CinA family
ACP92_RS11560	COG0640	Transcriptional regulator
ACP92_RS11570	COG0583	DNA-binding transcription factor activity
ACP92_RS11575	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
ACP92_RS11580	COG3002	Belongs to the UPF0753 family
ACP92_RS11590	COG1464	Belongs to the NlpA lipoprotein family
ACP92_RS11595	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
ACP92_RS11600	COG2011	ABC-type metal ion transport system permease component
ACP92_RS11605	COG0366	Alpha amylase catalytic
ACP92_RS11610	COG0366	Alpha amylase catalytic
ACP92_RS11615	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
ACP92_RS11625	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
ACP92_RS11630	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
ACP92_RS11635	COG4521	taurine ABC transporter
ACP92_RS11640	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
ACP92_RS11645	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
ACP92_RS11655	COG1045	serine acetyltransferase
ACP92_RS11665	COG4774	siderophore transport
ACP92_RS11670	COG1595	DNA-templated transcription, initiation
ACP92_RS11685	COG2091	lysine biosynthetic process via aminoadipic acid
ACP92_RS11700	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
ACP92_RS11710	COG0657	acetylesterase activity
ACP92_RS11715	COG4774	siderophore transport
ACP92_RS11845	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
ACP92_RS11865	COG1917	Cupin 2, conserved barrel domain protein
ACP92_RS11865	COG2207	Transcriptional regulator
ACP92_RS11870	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
ACP92_RS11875	COG0318	PFAM AMP-dependent synthetase and ligase
ACP92_RS11880	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
ACP92_RS11880	COG1796	DNA polymerase
ACP92_RS11895	COG1136	(ABC) transporter
ACP92_RS11925	COG0071	Belongs to the small heat shock protein (HSP20) family
ACP92_RS11955	COG4572	Cation transport regulator
ACP92_RS11990	COG3243	poly(R)-hydroxyalkanoic acid synthase
ACP92_RS11995	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
ACP92_RS12010	COG0583	DNA-binding transcription factor activity
ACP92_RS12015	COG4106	trans-aconitate 2-methyltransferase activity
ACP92_RS12020	COG2207	Transcriptional regulator
ACP92_RS12025	COG0300	oxidoreductase activity
ACP92_RS12035	COG2909	trisaccharide binding
ACP92_RS12065	COG0673	inositol 2-dehydrogenase activity
ACP92_RS12070	COG0673	inositol 2-dehydrogenase activity
ACP92_RS12085	COG1172	Belongs to the binding-protein-dependent transport system permease family
ACP92_RS12095	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
ACP92_RS12100	COG3962	Belongs to the TPP enzyme family
ACP92_RS12110	COG3718	enzyme involved in inositol metabolism
ACP92_RS12135	COG1595	DNA-templated transcription, initiation
ACP92_RS12145	COG0642	Histidine kinase
ACP92_RS12155	COG0840	transmembrane signaling receptor activity
ACP92_RS12160	COG2814	Major facilitator Superfamily
ACP92_RS12170	COG0417	DNA replication proofreading
ACP92_RS12180	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
ACP92_RS12190	COG0300	oxidoreductase activity
ACP92_RS12205	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
ACP92_RS12215	COG0156	8-amino-7-oxononanoate synthase activity
ACP92_RS12235	COG0784	Response regulator, receiver
ACP92_RS12235	COG4191	Histidine kinase
ACP92_RS12260	COG4567	Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain
ACP92_RS12275	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
ACP92_RS12280	COG1845	cytochrome c oxidase, subunit III
ACP92_RS12285	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
ACP92_RS12290	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
ACP92_RS12295	COG0477	Major facilitator Superfamily
ACP92_RS12305	COG0038	chloride channel
ACP92_RS12320	COG0745	RESPONSE REGULATOR receiver
ACP92_RS12340	COG2198	Histidine kinase
ACP92_RS12340	COG0643	Histidine kinase
ACP92_RS12345	COG1028	Short-chain dehydrogenase reductase Sdr
ACP92_RS12365	COG1309	transcriptional regulator
ACP92_RS12370	COG0681	Belongs to the peptidase S26 family
ACP92_RS12380	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ACP92_RS12395	COG0642	Histidine kinase
ACP92_RS12400	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
ACP92_RS12420	COG4191	Histidine kinase
ACP92_RS12420	COG0784	Response regulator, receiver
ACP92_RS12435	COG0784	Response regulator, receiver
ACP92_RS12435	COG2205	protein histidine kinase activity
ACP92_RS12435	COG5002	protein histidine kinase activity
ACP92_RS12440	COG0784	Response regulator, receiver
ACP92_RS12445	COG4251	negative regulation of phosphorylation
ACP92_RS12455	COG0166	Belongs to the GPI family
ACP92_RS12465	COG1640	4-alpha-glucanotransferase
ACP92_RS12470	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
ACP92_RS12480	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
ACP92_RS12485	COG0297	glycogen (starch) synthase activity
ACP92_RS12500	COG3604	Transcriptional regulator
ACP92_RS12520	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
ACP92_RS12530	COG2944	sequence-specific DNA binding
ACP92_RS12545	COG4302	ethanolamine ammonia-lyase activity
ACP92_RS12560	COG0531	amino acid
ACP92_RS12575	COG3914	O-linked N-acetylglucosamine transferase SPINDLY family
ACP92_RS12590	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
ACP92_RS12595	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
ACP92_RS12595	COG1116	anion transmembrane transporter activity
ACP92_RS12605	COG0642	Histidine kinase
ACP92_RS12625	COG1741	Belongs to the pirin family
ACP92_RS12640	COG0583	DNA-binding transcription factor activity
ACP92_RS12650	COG2814	Major facilitator Superfamily
ACP92_RS12660	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
ACP92_RS12665	COG0671	phosphoesterase, PA-phosphatase related
ACP92_RS12670	COG1597	lipid kinase activity
ACP92_RS12690	COG0523	cobalamin synthesis protein
ACP92_RS12695	COG1469	GTP cyclohydrolase I activity
ACP92_RS12715	COG1024	Enoyl-CoA hydratase
ACP92_RS12720	COG1960	acyl-CoA dehydrogenase activity
ACP92_RS12735	COG0583	DNA-binding transcription factor activity
ACP92_RS12740	COG1028	Short-chain dehydrogenase reductase Sdr
ACP92_RS12755	COG0625	glutathione transferase activity
ACP92_RS12770	COG0436	Aminotransferase
ACP92_RS12810	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
ACP92_RS12820	COG2197	response regulator
ACP92_RS12825	COG4585	Histidine kinase
ACP92_RS12830	COG4251	negative regulation of phosphorylation
ACP92_RS12845	COG3188	usher protein
ACP92_RS12875	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
ACP92_RS12880	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
ACP92_RS12885	COG0740	serine-type endopeptidase activity
ACP92_RS12890	COG0544	peptidyl-prolyl cis-trans isomerase activity
ACP92_RS12895	COG3045	CreA protein
ACP92_RS12915	COG2273	Hydrolase Family 16
ACP92_RS12915	COG2931	calcium- and calmodulin-responsive adenylate cyclase activity
ACP92_RS12950	COG1304	FMN binding
ACP92_RS12960	COG0084	hydrolase, TatD family'
ACP92_RS12965	COG4567	Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain
ACP92_RS12985	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
ACP92_RS12990	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
ACP92_RS13010	COG0584	glycerophosphoryl diester phosphodiesterase
ACP92_RS13015	COG3511	phospholipase C
ACP92_RS13025	COG0848	biopolymer transport protein
ACP92_RS13030	COG0811	peptide transport
ACP92_RS13040	COG1609	Transcriptional regulator
ACP92_RS13045	COG1653	transport
ACP92_RS13050	COG1175	transmembrane transport
ACP92_RS13055	COG0395	ABC-type sugar transport system, permease component
ACP92_RS13070	COG1301	dicarboxylic acid transport
ACP92_RS13095	COG0583	DNA-binding transcription factor activity
ACP92_RS13160	COG5002	protein histidine kinase activity
ACP92_RS13160	COG0784	Response regulator, receiver
ACP92_RS13160	COG2198	Histidine kinase
ACP92_RS13170	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
ACP92_RS13180	COG4771	TonB-dependent receptor
ACP92_RS13195	COG1492	cobalamin metabolic process
ACP92_RS13215	COG0778	Nitroreductase
ACP92_RS13255	COG1903	Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A
ACP92_RS13265	COG1648	precorrin-2 dehydrogenase activity
ACP92_RS13265	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
ACP92_RS13280	COG3411	Ferredoxin
ACP92_RS13310	COG0840	transmembrane signaling receptor activity
ACP92_RS13340	COG0633	Ferredoxin
ACP92_RS13340	COG3217	Mosc domain protein beta barrel domain protein
ACP92_RS13355	COG0840	transmembrane signaling receptor activity
ACP92_RS13370	COG1607	acyl-coa hydrolase
ACP92_RS13375	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
ACP92_RS13415	COG3052	prosthetic group binding
ACP92_RS13435	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
ACP92_RS13440	COG1802	Transcriptional regulator
ACP92_RS13445	COG0564	pseudouridine synthase activity
ACP92_RS13450	COG3550	peptidyl-serine autophosphorylation
ACP92_RS13525	COG1566	PFAM secretion protein HlyD family protein
ACP92_RS13530	COG2814	Major facilitator Superfamily
ACP92_RS13535	COG0583	DNA-binding transcription factor activity
ACP92_RS13540	COG0667	Aldo Keto reductase
ACP92_RS13565	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
ACP92_RS13570	COG1062	S-(hydroxymethyl)glutathione dehydrogenase activity
ACP92_RS13585	COG0667	Aldo Keto reductase
ACP92_RS13595	COG2824	Alkylphosphonate utilization operon protein PhnA
ACP92_RS13605	COG0672	)-iron permease
ACP92_RS13610	COG4633	Protein conserved in bacteria
ACP92_RS13620	COG0840	transmembrane signaling receptor activity
ACP92_RS13635	COG0840	transmembrane signaling receptor activity
ACP92_RS13650	COG0318	PFAM AMP-dependent synthetase and ligase
ACP92_RS13655	COG2204	response regulator
ACP92_RS13660	COG5000	phosphorelay sensor kinase activity
ACP92_RS13665	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
ACP92_RS13675	COG1434	Gram-negative-bacterium-type cell wall biogenesis
ACP92_RS13690	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
ACP92_RS13705	COG0489	protein tyrosine kinase activity
ACP92_RS13715	COG3267	Type II secretory pathway component ExeA
ACP92_RS13715	COG3409	Peptidoglycan-binding domain 1 protein
ACP92_RS13745	COG0438	transferase activity, transferring glycosyl groups
ACP92_RS13750	COG0367	asparagine synthase
ACP92_RS13760	COG0297	glycogen (starch) synthase activity
ACP92_RS13765	COG0726	polysaccharide deacetylase
ACP92_RS13775	COG2244	polysaccharide biosynthetic process
ACP92_RS13795	COG2945	thiolester hydrolase activity
ACP92_RS13860	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
ACP92_RS13865	COG0148	phosphopyruvate hydratase activity
ACP92_RS13870	COG2877	3-deoxy-8-phosphooctulonate synthase activity
ACP92_RS13875	COG0504	CTP synthase activity
ACP92_RS13880	COG2267	carboxylic ester hydrolase activity
ACP92_RS13890	COG0084	hydrolase, TatD family'
ACP92_RS13900	COG1136	(ABC) transporter
ACP92_RS13905	COG4591	ABC-type transport system involved in lipoprotein release permease component
ACP92_RS13920	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
ACP92_RS13940	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
ACP92_RS13945	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
ACP92_RS13950	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
ACP92_RS13975	COG0583	DNA-binding transcription factor activity
ACP92_RS14010	COG1960	acyl-CoA dehydrogenase activity
ACP92_RS14015	COG3777	bacterial-type RNA polymerase transcription factor activity, metal ion regulated sequence-specific DNA binding
ACP92_RS14020	COG0583	DNA-binding transcription factor activity
ACP92_RS14030	COG0300	oxidoreductase activity
ACP92_RS14065	COG0312	modulator of DNA gyrase
ACP92_RS14070	COG0312	modulator of DNA gyrase
ACP92_RS14075	COG4178	(ABC) transporter
ACP92_RS14100	COG1522	sequence-specific DNA binding
ACP92_RS14105	COG1595	DNA-templated transcription, initiation
ACP92_RS14115	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
ACP92_RS14135	COG1104	cysteine desulfurase activity
ACP92_RS14140	COG0822	iron-sulfur transferase activity
ACP92_RS14145	COG0316	Belongs to the HesB IscA family
ACP92_RS14155	COG0443	Heat shock 70 kDa protein
ACP92_RS14160	COG0633	Ferredoxin
ACP92_RS14215	COG4231	catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates
ACP92_RS14220	COG5420	small protein containing a coiled-coil domain
ACP92_RS14235	COG2710	Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein
ACP92_RS14240	COG2710	Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein
ACP92_RS14245	COG2710	Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein
ACP92_RS14290	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
ACP92_RS14300	COG5554	nitrogen fixation
ACP92_RS14305	COG1104	cysteine desulfurase activity
ACP92_RS14320	COG5554	nitrogen fixation
ACP92_RS14335	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
ACP92_RS14355	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
ACP92_RS14405	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ACP92_RS14410	COG2274	protein secretion by the type I secretion system
ACP92_RS14420	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
ACP92_RS14425	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
ACP92_RS14430	COG1127	ABC transporter
ACP92_RS14445	COG0583	DNA-binding transcription factor activity
ACP92_RS14450	COG1346	cytolysis
ACP92_RS14460	COG1881	PFAM PEBP family protein
ACP92_RS14475	COG1285	pathogenesis
ACP92_RS14480	COG1742	UPF0060 membrane protein
ACP92_RS14485	COG2223	nitrite transmembrane transporter activity
ACP92_RS14490	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
ACP92_RS14495	COG2146	nitrite reductase [NAD(P)H] activity
ACP92_RS14500	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
ACP92_RS14505	COG0243	molybdopterin cofactor binding
ACP92_RS14535	COG3561	AntA/AntB antirepressor
ACP92_RS14550	COG2801	Transposase and inactivated derivatives
ACP92_RS14555	COG2963	transposase activity
ACP92_RS14580	COG0840	transmembrane signaling receptor activity
ACP92_RS14585	COG0840	transmembrane signaling receptor activity
ACP92_RS14595	COG3064	Membrane
ACP92_RS14605	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
ACP92_RS14615	COG2959	enzyme of heme biosynthesis
ACP92_RS14625	COG0181	hydroxymethylbilane synthase activity
ACP92_RS14630	COG2352	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
ACP92_RS14645	COG0165	Argininosuccinate lyase
ACP92_RS14690	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
ACP92_RS14700	COG0583	DNA-binding transcription factor activity
ACP92_RS14705	COG2814	Major facilitator Superfamily
ACP92_RS14710	COG2236	Acts on guanine, xanthine and to a lesser extent hypoxanthine
ACP92_RS14715	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
ACP92_RS14720	COG3705	Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
ACP92_RS14725	COG0330	HflC and HflK could
ACP92_RS14730	COG0330	HflC and HflK could
ACP92_RS14735	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
ACP92_RS14740	COG1923	regulation of RNA biosynthetic process
ACP92_RS14745	COG1160	GTP binding
ACP92_RS14760	COG0124	histidyl-tRNA synthetase
ACP92_RS14765	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
ACP92_RS14775	COG0820	rRNA (adenine-C2-)-methyltransferase activity
ACP92_RS14780	COG0105	UTP biosynthetic process
ACP92_RS14785	COG0670	Belongs to the BI1 family
ACP92_RS14790	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
ACP92_RS14795	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
ACP92_RS14800	COG1388	LysM domain
ACP92_RS14800	COG4942	peptidase
ACP92_RS14805	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
ACP92_RS14810	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
ACP92_RS14820	COG1199	ATP-dependent helicase activity
ACP92_RS14835	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
ACP92_RS14840	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
ACP92_RS14845	COG0508	dehydrogenase complex catalyzes the overall conversion of
ACP92_RS14850	COG0567	Dehydrogenase, E1 component
ACP92_RS14855	COG0372	Belongs to the citrate synthase family
ACP92_RS14860	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
ACP92_RS14865	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
ACP92_RS14870	COG1053	succinate dehydrogenase
ACP92_RS14875	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
ACP92_RS14885	COG2188	Transcriptional regulator
ACP92_RS14890	COG0039	L-malate dehydrogenase activity
ACP92_RS14905	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
ACP92_RS14915	COG0835	chemotaxis
ACP92_RS14920	COG0643	Histidine kinase
ACP92_RS14920	COG2198	Histidine kinase
ACP92_RS14925	COG0745	RESPONSE REGULATOR receiver
ACP92_RS14935	COG1360	Flagellar Motor Protein
ACP92_RS14945	COG0220	tRNA (guanine-N7-)-methyltransferase activity
ACP92_RS14960	COG0626	cystathionine gamma-synthase activity
ACP92_RS14970	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
ACP92_RS14985	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
ACP92_RS15000	COG1028	Short-chain dehydrogenase reductase Sdr
ACP92_RS15005	COG3243	poly(R)-hydroxyalkanoic acid synthase
ACP92_RS15025	COG0583	DNA-binding transcription factor activity
ACP92_RS15035	COG0564	pseudouridine synthase activity
ACP92_RS15050	COG2814	Major facilitator Superfamily
ACP92_RS15065	COG3022	response to hydroperoxide
ACP92_RS15080	COG0436	Aminotransferase
ACP92_RS15085	COG0625	glutathione transferase activity
ACP92_RS15090	COG5002	protein histidine kinase activity
ACP92_RS15090	COG3447	MASE1 domain protein
ACP92_RS15090	COG5001	Diguanylate cyclase
ACP92_RS15100	COG5001	Diguanylate cyclase
ACP92_RS15100	COG4251	negative regulation of phosphorylation
ACP92_RS15100	COG3706	GGDEF domain
ACP92_RS15100	COG2203	Gaf domain
ACP92_RS15105	COG2201	protein-glutamate methylesterase activity
ACP92_RS15130	COG0840	transmembrane signaling receptor activity
ACP92_RS15140	COG0560	Phosphoserine phosphatase
ACP92_RS15145	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
ACP92_RS15150	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
ACP92_RS15155	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
ACP92_RS15160	COG1278	Cold shock
ACP92_RS15165	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
ACP92_RS15170	COG0583	DNA-binding transcription factor activity
ACP92_RS15180	COG0840	transmembrane signaling receptor activity
ACP92_RS15200	COG2814	Major facilitator Superfamily
ACP92_RS15245	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ACP92_RS15265	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
ACP92_RS15270	COG2717	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain
ACP92_RS15275	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
ACP92_RS15310	COG1294	oxidase, subunit
ACP92_RS15325	COG1764	response to oxidative stress
ACP92_RS15330	COG1846	Transcriptional regulator
ACP92_RS15340	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
ACP92_RS15345	COG2186	Transcriptional regulator
ACP92_RS15350	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
ACP92_RS15370	COG0583	DNA-binding transcription factor activity
ACP92_RS15380	COG0840	transmembrane signaling receptor activity
ACP92_RS15395	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
ACP92_RS15400	COG1024	Enoyl-CoA hydratase
ACP92_RS15430	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
ACP92_RS15435	COG0489	protein tyrosine kinase activity
ACP92_RS15440	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
ACP92_RS15440	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
ACP92_RS15450	COG2390	Transcriptional regulator
ACP92_RS15455	COG3842	ATPase activity
ACP92_RS15460	COG1653	transport
ACP92_RS15465	COG1175	transmembrane transport
ACP92_RS15470	COG0395	ABC-type sugar transport system, permease component
ACP92_RS15485	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
ACP92_RS15490	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
ACP92_RS15500	COG3143	Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P)
ACP92_RS15505	COG0784	Response regulator, receiver
ACP92_RS15505	COG0643	Histidine kinase
ACP92_RS15505	COG2198	Histidine kinase
ACP92_RS15510	COG0583	DNA-binding transcription factor activity
ACP92_RS15515	COG0730	response to heat
ACP92_RS15520	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
ACP92_RS15530	COG0175	sulfate reduction
ACP92_RS15535	COG0175	sulfate reduction
ACP92_RS15540	COG2895	sulfate adenylyltransferase (ATP) activity
ACP92_RS15550	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
ACP92_RS15560	COG0795	lipopolysaccharide-transporting ATPase activity
ACP92_RS15565	COG0795	lipopolysaccharide-transporting ATPase activity
ACP92_RS15570	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
ACP92_RS15580	COG1902	pentaerythritol trinitrate reductase activity
ACP92_RS15600	COG0708	Exodeoxyribonuclease III
ACP92_RS15615	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
ACP92_RS15635	COG3829	transcription factor binding
ACP92_RS15645	COG0840	transmembrane signaling receptor activity
ACP92_RS15655	COG3852	Histidine kinase
ACP92_RS15660	COG0174	glutamine synthetase
ACP92_RS15705	COG2975	iron-sulfur cluster assembly
ACP92_RS15715	COG0443	Heat shock 70 kDa protein
ACP92_RS15725	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
ACP92_RS15730	COG0316	Belongs to the HesB IscA family
ACP92_RS15735	COG0822	iron-sulfur transferase activity
ACP92_RS15740	COG1104	cysteine desulfurase activity
ACP92_RS15750	COG2186	Transcriptional regulator
ACP92_RS15755	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
ACP92_RS15760	COG0840	transmembrane signaling receptor activity
ACP92_RS15765	COG2706	6-phosphogluconolactonase activity
ACP92_RS15770	COG2721	sulfolactate sulfo-lyase activity
ACP92_RS15775	COG2271	Major facilitator Superfamily
ACP92_RS15780	COG0701	Predicted permease
ACP92_RS15785	COG2603	Catalyzes the transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA
ACP92_RS15790	COG0709	Synthesizes selenophosphate from selenide and ATP
ACP92_RS15810	COG0556	nucleotide-excision repair
ACP92_RS15830	COG0583	DNA-binding transcription factor activity
ACP92_RS15840	COG0803	Belongs to the bacterial solute-binding protein 9 family
ACP92_RS15845	COG1108	ABC-type Mn2 Zn2 transport systems permease components
ACP92_RS15860	COG1136	(ABC) transporter
ACP92_RS15860	COG0577	efflux transmembrane transporter activity
ACP92_RS15895	COG1473	amidohydrolase
ACP92_RS15900	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
ACP92_RS15905	COG4608	Belongs to the ABC transporter superfamily
ACP92_RS15910	COG0444	Belongs to the ABC transporter superfamily
ACP92_RS15925	COG0747	negative chemotaxis
ACP92_RS15930	COG0583	DNA-binding transcription factor activity
ACP92_RS15975	COG2515	1-aminocyclopropane-1-carboxylate deaminase
ACP92_RS15980	COG3047	cAMP biosynthetic process
ACP92_RS15990	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
ACP92_RS16025	COG3278	Belongs to the heme-copper respiratory oxidase family
ACP92_RS16035	COG2217	Heavy metal translocating P-type atpase
ACP92_RS16060	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
ACP92_RS16065	COG2814	Major facilitator Superfamily
ACP92_RS16070	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
ACP92_RS16075	COG0745	RESPONSE REGULATOR receiver
ACP92_RS16110	COG1051	belongs to the nudix hydrolase family
ACP92_RS16115	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
ACP92_RS16120	COG2935	proteasome-mediated ubiquitin-dependent protein catabolic process
ACP92_RS16125	COG0167	dihydroorotate dehydrogenase activity
ACP92_RS16155	COG0840	transmembrane signaling receptor activity
ACP92_RS16160	COG4944	Protein of unknown function (DUF1109)
ACP92_RS16165	COG1595	DNA-templated transcription, initiation
ACP92_RS16180	COG3220	belongs to the UPF0276 family
ACP92_RS16235	COG3210	domain, Protein
ACP92_RS16240	COG2831	hemolysin activation secretion protein
ACP92_RS16260	COG3128	pkhd-type hydroxylase
ACP92_RS16265	COG0583	DNA-binding transcription factor activity
ACP92_RS16285	COG2252	PERMEase
ACP92_RS16295	COG1529	Aldehyde oxidase and xanthine dehydrogenase
ACP92_RS16305	COG0402	S-adenosylhomocysteine deaminase activity
ACP92_RS16320	COG1566	PFAM secretion protein HlyD family protein
ACP92_RS16325	COG2814	Major facilitator Superfamily
ACP92_RS16330	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
ACP92_RS16345	COG2850	peptidyl-arginine hydroxylation
ACP92_RS16355	COG1234	tRNA 3'-trailer cleavage
ACP92_RS16360	COG3317	Gram-negative-bacterium-type cell outer membrane assembly
ACP92_RS16365	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
ACP92_RS16370	COG0180	Tryptophanyl-tRNA synthetase
ACP92_RS16375	COG1994	Peptidase M50
ACP92_RS16380	COG0009	L-threonylcarbamoyladenylate synthase
ACP92_RS16385	COG0501	Belongs to the peptidase M48B family
ACP92_RS16390	COG0613	PHP domain protein
ACP92_RS16430	COG0285	dihydrofolate synthase activity
ACP92_RS16435	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
ACP92_RS16440	COG0159	tryptophan synthase activity
ACP92_RS16445	COG0133	tryptophan synthase activity
ACP92_RS16450	COG0135	phosphoribosylanthranilate isomerase activity
ACP92_RS16455	COG0101	tRNA pseudouridine synthase activity
ACP92_RS16470	COG0473	3-isopropylmalate dehydrogenase activity
ACP92_RS16475	COG0066	3-isopropylmalate dehydratase activity
ACP92_RS16485	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
ACP92_RS16490	COG4783	chaperone-mediated protein folding
ACP92_RS16495	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
ACP92_RS16500	COG2814	Major facilitator Superfamily
ACP92_RS16515	COG1295	ribonuclease BN
ACP92_RS16530	COG0277	FAD linked oxidase domain protein
ACP92_RS16555	COG1178	ABC-type Fe3 transport system permease component
ACP92_RS16560	COG3842	ATPase activity
ACP92_RS16575	COG1028	Short-chain dehydrogenase reductase Sdr
ACP92_RS16580	COG2186	Transcriptional regulator
ACP92_RS16590	COG4336	lyase activity
ACP92_RS16595	COG2814	Major facilitator Superfamily
ACP92_RS16600	COG0025	NhaP-type Na H and K H
ACP92_RS16640	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
ACP92_RS16645	COG0791	NLP P60 protein
ACP92_RS16650	COG2186	Transcriptional regulator
ACP92_RS16685	COG3842	ATPase activity
ACP92_RS16700	COG3833	ABC-type maltose transport systems, permease component
ACP92_RS16750	COG0789	Transcriptional regulator
ACP92_RS16755	COG0667	Aldo Keto reductase
ACP92_RS16780	COG2204	response regulator
ACP92_RS16790	COG0477	Major facilitator Superfamily
ACP92_RS16805	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
ACP92_RS16810	COG1546	Belongs to the CinA family
ACP92_RS16815	COG0284	orotidine-5'-phosphate decarboxylase activity
ACP92_RS16820	COG1704	LemA family
ACP92_RS16840	COG2027	D-alanyl-D-alanine carboxypeptidase
ACP92_RS16845	COG3706	GGDEF domain
ACP92_RS16855	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
ACP92_RS16870	COG1309	transcriptional regulator
ACP92_RS16895	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
ACP92_RS16900	COG0784	Response regulator, receiver
ACP92_RS16900	COG2198	Histidine kinase
ACP92_RS16900	COG2205	protein histidine kinase activity
ACP92_RS16915	COG0642	Histidine kinase
ACP92_RS16925	COG4774	siderophore transport
ACP92_RS16930	COG3128	pkhd-type hydroxylase
ACP92_RS16935	COG0477	Major facilitator Superfamily
ACP92_RS16940	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
ACP92_RS16950	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
ACP92_RS16955	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
ACP92_RS16970	COG1653	transport
ACP92_RS16980	COG3833	ABC-type maltose transport systems, permease component
ACP92_RS16985	COG1063	alcohol dehydrogenase
ACP92_RS17040	COG2337	Toxic component of a toxin-antitoxin (TA) module
ACP92_RS17060	COG0328	RNA-DNA hybrid ribonuclease activity
ACP92_RS17065	COG2226	methyltransferase
ACP92_RS17070	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
ACP92_RS17075	COG0741	lytic transglycosylase activity
ACP92_RS17075	COG1388	LysM domain
ACP92_RS17080	COG4172	Belongs to the ABC transporter superfamily
ACP92_RS17085	COG4239	(ABC) transporter, permease
ACP92_RS17090	COG4174	ABC transporter (Permease)
ACP92_RS17105	COG0513	Belongs to the DEAD box helicase family
ACP92_RS17120	COG3008	intermembrane lipid transfer
ACP92_RS17120	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
ACP92_RS17125	COG2995	paraquat-inducible protein a
ACP92_RS17130	COG2995	paraquat-inducible protein a
ACP92_RS17135	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
ACP92_RS17145	COG0840	transmembrane signaling receptor activity
ACP92_RS17150	COG1262	PFAM Formylglycine-generating sulfatase enzyme
ACP92_RS17155	COG4301	Catalyzes the SAM-dependent triple methylation of the alpha-amino group of histidine to form hercynine, a step in the biosynthesis pathway of ergothioneine
ACP92_RS17160	COG1132	(ABC) transporter
ACP92_RS17165	COG1902	pentaerythritol trinitrate reductase activity
ACP92_RS17170	COG0586	Pfam SNARE associated Golgi protein
ACP92_RS17180	COG1802	Transcriptional regulator
ACP92_RS17185	COG1028	Short-chain dehydrogenase reductase Sdr
ACP92_RS17190	COG3246	L-lysine catabolic process to acetate
ACP92_RS17205	COG1538	Outer membrane efflux protein
ACP92_RS17215	COG2943	transferase activity, transferring hexosyl groups
ACP92_RS17215	COG3416	Protein conserved in bacteria
ACP92_RS17220	COG3131	Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs)
ACP92_RS17250	COG0717	Belongs to the dCTP deaminase family
ACP92_RS17265	COG1643	Atp-dependent helicase
ACP92_RS17270	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
ACP92_RS17270	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
ACP92_RS17275	COG2924	Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes
ACP92_RS17280	COG0612	Peptidase, M16
ACP92_RS17285	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
ACP92_RS17290	COG4651	solute:proton antiporter activity
ACP92_RS17290	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
ACP92_RS17295	COG1522	sequence-specific DNA binding
ACP92_RS17320	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
ACP92_RS17325	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
ACP92_RS17335	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
ACP92_RS17380	COG0583	DNA-binding transcription factor activity
ACP92_RS17410	COG1028	Short-chain dehydrogenase reductase Sdr
ACP92_RS17415	COG1309	transcriptional regulator
ACP92_RS17420	COG0604	alcohol dehydrogenase
ACP92_RS17430	COG2070	2-Nitropropane dioxygenase
ACP92_RS17440	COG4977	sequence-specific DNA binding
ACP92_RS17445	COG0492	ferredoxin-NADP+ reductase activity
ACP92_RS17450	COG1959	2 iron, 2 sulfur cluster binding
ACP92_RS17455	COG1944	ATP diphosphatase activity
ACP92_RS17490	COG1126	abc transporter atp-binding protein
ACP92_RS17495	COG0765	amino acid transport
ACP92_RS17500	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
ACP92_RS17505	COG1126	abc transporter atp-binding protein
ACP92_RS17510	COG0765	amino acid transport
ACP92_RS17515	COG0765	amino acid transport
ACP92_RS17530	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
ACP92_RS17540	COG0840	transmembrane signaling receptor activity
ACP92_RS17575	COG3733	amine oxidase
ACP92_RS17590	COG3712	iron ion homeostasis
ACP92_RS17595	COG4774	siderophore transport
ACP92_RS17605	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
ACP92_RS17610	COG1749	Flagellar hook protein flgE
ACP92_RS17620	COG0583	DNA-binding transcription factor activity
ACP92_RS17645	COG0840	transmembrane signaling receptor activity
ACP92_RS17660	COG2203	Gaf domain
ACP92_RS17660	COG3706	GGDEF domain
ACP92_RS17660	COG4251	negative regulation of phosphorylation
ACP92_RS17660	COG5001	Diguanylate cyclase
ACP92_RS17670	COG0308	aminopeptidase N
ACP92_RS17690	COG0697	spore germination
ACP92_RS17695	COG0433	COG0433 Predicted ATPase
ACP92_RS17700	COG0217	transcriptional regulatory protein
ACP92_RS17705	COG0151	Belongs to the GarS family
ACP92_RS17710	COG0668	transmembrane transport
ACP92_RS17715	COG0408	coproporphyrinogen oxidase activity
ACP92_RS17720	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
ACP92_RS17725	COG0799	negative regulation of ribosome biogenesis
ACP92_RS17730	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
ACP92_RS17735	COG0424	maF-like protein
ACP92_RS17750	COG1132	(ABC) transporter
ACP92_RS17760	COG1442	glycosyl transferase family 8
ACP92_RS17780	COG1054	Belongs to the UPF0176 family
ACP92_RS17790	COG1741	Belongs to the pirin family
ACP92_RS17795	COG0583	DNA-binding transcription factor activity
ACP92_RS17800	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
ACP92_RS17805	COG0513	Belongs to the DEAD box helicase family
ACP92_RS17820	COG0837	glucose binding
ACP92_RS17820	COG1737	Transcriptional regulator
ACP92_RS17825	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
ACP92_RS17835	COG0436	Aminotransferase
ACP92_RS17840	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
ACP92_RS17845	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
ACP92_RS17870	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
ACP92_RS17880	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
ACP92_RS17905	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
ACP92_RS17920	COG0583	DNA-binding transcription factor activity
ACP92_RS17935	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
ACP92_RS17940	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
ACP92_RS17945	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
ACP92_RS17955	COG0779	Required for maturation of 30S ribosomal subunits
ACP92_RS17960	COG1187	pseudouridine synthase activity
ACP92_RS17965	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
ACP92_RS17975	COG0069	glutamate synthase activity
ACP92_RS17980	COG0425	Belongs to the sulfur carrier protein TusA family
ACP92_RS17985	COG0494	nUDIX hydrolase
ACP92_RS17990	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
ACP92_RS18000	COG0584	glycerophosphoryl diester phosphodiesterase
ACP92_RS18005	COG2972	Histidine kinase
ACP92_RS18010	COG3279	Response regulator of the LytR AlgR family
ACP92_RS18015	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
ACP92_RS18035	COG2233	PERMEase
ACP92_RS18045	COG2329	Antibiotic biosynthesis monooxygenase
ACP92_RS18060	COG2925	Exonuclease
ACP92_RS18070	COG1695	Transcriptional regulator
ACP92_RS18090	COG2321	neutral zinc metallopeptidase
ACP92_RS18110	COG2223	nitrite transmembrane transporter activity
ACP92_RS18115	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
ACP92_RS18120	COG1140	nitrate reductase beta subunit
ACP92_RS18125	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
ACP92_RS18130	COG2181	nitrate reductase activity
ACP92_RS18135	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
ACP92_RS18140	COG3850	Histidine kinase
ACP92_RS18145	COG2197	response regulator
ACP92_RS18150	COG2501	S4 domain
ACP92_RS18185	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
ACP92_RS18185	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
ACP92_RS18205	COG1129	ABC transporter
ACP92_RS18230	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
ACP92_RS18235	COG4638	Rieske (2fe-2S)
ACP92_RS18270	COG0583	DNA-binding transcription factor activity
ACP92_RS18285	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
ACP92_RS18295	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
ACP92_RS18300	COG1804	L-carnitine dehydratase bile acid-inducible protein F
ACP92_RS18305	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
ACP92_RS18315	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
ACP92_RS18320	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
ACP92_RS18325	COG2199	diguanylate cyclase activity
ACP92_RS18325	COG2203	Gaf domain
ACP92_RS18335	COG2870	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
ACP92_RS18345	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
ACP92_RS18355	COG0776	regulation of translation
ACP92_RS18365	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
ACP92_RS18370	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
ACP92_RS18375	COG0287	Prephenate dehydrogenase
ACP92_RS18385	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
ACP92_RS18400	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
ACP92_RS18405	COG0546	phosphoglycolate phosphatase activity
ACP92_RS18425	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
ACP92_RS18430	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
ACP92_RS18455	COG2986	histidine ammonia-lyase
ACP92_RS18480	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
ACP92_RS18490	COG1028	Short-chain dehydrogenase reductase Sdr
ACP92_RS18495	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
ACP92_RS18515	COG0840	transmembrane signaling receptor activity
ACP92_RS18525	COG3485	protocatechuate 3,4-dioxygenase
ACP92_RS18545	COG3046	protein related to deoxyribodipyrimidine photolyase
ACP92_RS18555	COG0784	Response regulator, receiver
ACP92_RS18555	COG2198	Histidine kinase
ACP92_RS18555	COG2205	protein histidine kinase activity
ACP92_RS18565	COG0784	Response regulator, receiver
ACP92_RS18565	COG2205	protein histidine kinase activity
ACP92_RS18570	COG0840	transmembrane signaling receptor activity
ACP92_RS18575	COG0835	chemotaxis
ACP92_RS18575	COG0784	Response regulator, receiver
ACP92_RS18585	COG4943	cyclic-guanylate-specific phosphodiesterase activity
ACP92_RS18590	COG4191	Histidine kinase
ACP92_RS18610	COG4566	intracellular signal transduction
ACP92_RS18640	COG1028	Short-chain dehydrogenase reductase Sdr
ACP92_RS18650	COG0745	RESPONSE REGULATOR receiver
ACP92_RS18670	COG0745	RESPONSE REGULATOR receiver
ACP92_RS18685	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
ACP92_RS18740	COG1082	Xylose isomerase domain protein TIM barrel
ACP92_RS18740	COG3185	4-Hydroxyphenylpyruvate dioxygenase
ACP92_RS18755	COG1414	Transcriptional regulator
ACP92_RS18760	COG1414	Transcriptional regulator
ACP92_RS18765	COG0778	Nitroreductase
ACP92_RS18770	COG0583	DNA-binding transcription factor activity
ACP92_RS18780	COG0840	transmembrane signaling receptor activity
ACP92_RS18790	COG1024	Enoyl-CoA hydratase
ACP92_RS18800	COG0745	RESPONSE REGULATOR receiver
ACP92_RS18805	COG2205	protein histidine kinase activity
ACP92_RS18810	COG2156	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex
ACP92_RS18815	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
ACP92_RS18820	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
ACP92_RS18840	COG0454	-acetyltransferase
ACP92_RS18845	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
ACP92_RS18850	COG2130	NADP-dependent
ACP92_RS18855	COG1309	transcriptional regulator
ACP92_RS18865	COG4977	sequence-specific DNA binding
ACP92_RS18870	COG1408	metallophosphoesterase
ACP92_RS18885	COG0583	DNA-binding transcription factor activity
ACP92_RS18890	COG3842	ATPase activity
ACP92_RS18895	COG0395	ABC-type sugar transport system, permease component
ACP92_RS18900	COG1175	transmembrane transport
ACP92_RS18910	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
ACP92_RS18915	COG0500	methyltransferase
ACP92_RS18955	COG0386	Belongs to the glutathione peroxidase family
ACP92_RS18960	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
ACP92_RS18965	COG3284	Transcriptional regulator
ACP92_RS18970	COG0583	DNA-binding transcription factor activity
ACP92_RS19005	COG1028	Short-chain dehydrogenase reductase Sdr
ACP92_RS19015	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
ACP92_RS19020	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
ACP92_RS19045	COG0247	lactate metabolic process
ACP92_RS19050	COG0277	FAD linked oxidase domain protein
ACP92_RS19055	COG0277	FAD linked oxidase domain protein
ACP92_RS19060	COG0583	DNA-binding transcription factor activity
ACP92_RS19065	COG0277	FAD linked oxidase domain protein
ACP92_RS19070	COG2096	Adenosyltransferase
ACP92_RS19080	COG0142	geranyltranstransferase activity
ACP92_RS19085	COG1722	exodeoxyribonuclease VII activity
ACP92_RS19115	COG2198	Histidine kinase
ACP92_RS19115	COG0643	Histidine kinase
ACP92_RS19120	COG0840	transmembrane signaling receptor activity
ACP92_RS19125	COG0835	chemotaxis
ACP92_RS19130	COG1773	rubredoxin
ACP92_RS19140	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
ACP92_RS19145	COG0316	Belongs to the HesB IscA family
ACP92_RS19160	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
ACP92_RS19165	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
ACP92_RS19170	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
ACP92_RS19185	COG0418	dihydroorotase activity
ACP92_RS19190	COG1126	abc transporter atp-binding protein
ACP92_RS19195	COG0765	amino acid transport
ACP92_RS19200	COG0765	amino acid transport
ACP92_RS19210	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
ACP92_RS19220	COG5265	(ABC) transporter
ACP92_RS19230	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
ACP92_RS19235	COG0318	PFAM AMP-dependent synthetase and ligase
ACP92_RS19240	COG0243	molybdopterin cofactor binding
ACP92_RS19245	COG1917	Cupin 2, conserved barrel domain protein
ACP92_RS19245	COG2207	Transcriptional regulator
ACP92_RS19290	COG0765	amino acid transport
ACP92_RS19295	COG1126	abc transporter atp-binding protein
ACP92_RS19305	COG2721	sulfolactate sulfo-lyase activity
ACP92_RS19315	COG1028	Short-chain dehydrogenase reductase Sdr
ACP92_RS19325	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
ACP92_RS19355	COG1024	Enoyl-CoA hydratase
ACP92_RS19365	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
ACP92_RS19370	COG2967	ApaG domain
ACP92_RS19375	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
ACP92_RS19380	COG0546	phosphoglycolate phosphatase activity
ACP92_RS19390	COG0512	Glutamine amidotransferase of anthranilate synthase
ACP92_RS19395	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
ACP92_RS19400	COG0134	indole-3-glycerol-phosphate synthase activity
ACP92_RS19405	COG1028	Short-chain dehydrogenase reductase Sdr
ACP92_RS19415	COG0477	Major facilitator Superfamily
ACP92_RS19420	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
ACP92_RS19435	COG2226	methyltransferase
ACP92_RS19455	COG1238	metal cluster binding
ACP92_RS19460	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
ACP92_RS19465	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
ACP92_RS19465	COG2904	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
ACP92_RS19480	COG1493	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
ACP92_RS19485	COG1660	Displays ATPase and GTPase activities
ACP92_RS19490	COG1194	a g-specific adenine glycosylase
ACP92_RS19495	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
ACP92_RS19505	COG3017	Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein
ACP92_RS19510	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
ACP92_RS19520	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
ACP92_RS19525	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
ACP92_RS19545	COG0069	glutamate synthase activity
ACP92_RS19545	COG0067	glutamate synthase
ACP92_RS19545	COG0070	glutamate synthase
ACP92_RS19555	COG0861	Integral membrane protein TerC family
ACP92_RS19565	COG0583	DNA-binding transcription factor activity
ACP92_RS19575	COG0477	Major facilitator Superfamily
ACP92_RS19580	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
ACP92_RS19590	COG3131	Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs)
ACP92_RS19635	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
ACP92_RS19640	COG0840	transmembrane signaling receptor activity
ACP92_RS19650	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
ACP92_RS19660	COG0596	Alpha beta hydrolase
ACP92_RS19685	COG0028	Belongs to the TPP enzyme family
ACP92_RS19695	COG2207	Transcriptional regulator
ACP92_RS19705	COG1012	belongs to the aldehyde dehydrogenase family
ACP92_RS19710	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
ACP92_RS19725	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
ACP92_RS19730	COG0745	RESPONSE REGULATOR receiver
ACP92_RS19735	COG5002	protein histidine kinase activity
ACP92_RS19745	COG0629	single-stranded DNA binding
ACP92_RS19750	COG2814	Major facilitator Superfamily
ACP92_RS19765	COG5285	phytanoyl-CoA dioxygenase
ACP92_RS19770	COG0840	transmembrane signaling receptor activity
ACP92_RS19785	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
ACP92_RS19795	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
ACP92_RS19800	COG1137	ATPase activity
ACP92_RS19805	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
ACP92_RS19810	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
ACP92_RS19815	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
ACP92_RS19825	COG1028	Short-chain dehydrogenase reductase Sdr
ACP92_RS19835	COG1522	sequence-specific DNA binding
ACP92_RS19845	COG3708	Transcriptional regulator
ACP92_RS19845	COG2207	Transcriptional regulator
ACP92_RS19865	COG1414	Transcriptional regulator
ACP92_RS19870	COG3485	protocatechuate 3,4-dioxygenase
ACP92_RS19875	COG3485	protocatechuate 3,4-dioxygenase
ACP92_RS19880	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
ACP92_RS19885	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
ACP92_RS19925	COG0411	ABC transporter
ACP92_RS19930	COG4177	L-phenylalanine transmembrane transporter activity
ACP92_RS19940	COG0183	Belongs to the thiolase family
ACP92_RS19945	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
ACP92_RS19955	COG1414	Transcriptional regulator
ACP92_RS19965	COG0683	leucine binding
ACP92_RS19970	COG1024	Enoyl-CoA hydratase
ACP92_RS19975	COG1022	Amp-dependent synthetase and ligase
ACP92_RS19980	COG0183	Belongs to the thiolase family
ACP92_RS20020	COG1960	acyl-CoA dehydrogenase activity
ACP92_RS20035	COG0840	transmembrane signaling receptor activity
ACP92_RS20040	COG3386	PFAM SMP-30 Gluconolaconase
ACP92_RS20050	COG1172	Belongs to the binding-protein-dependent transport system permease family
ACP92_RS20055	COG1129	ABC transporter
ACP92_RS20060	COG1879	ABC-type sugar transport system periplasmic component
ACP92_RS20155	COG4251	negative regulation of phosphorylation
ACP92_RS20155	COG3706	GGDEF domain
ACP92_RS20155	COG2203	Gaf domain
ACP92_RS20155	COG5001	Diguanylate cyclase
ACP92_RS20175	COG2969	positive regulation of protein catabolic process
ACP92_RS20180	COG0625	glutathione transferase activity
ACP92_RS20185	COG2857	Cytochrome c1
ACP92_RS20190	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
ACP92_RS20195	COG0723	plastoquinol--plastocyanin reductase activity
ACP92_RS20200	COG1970	mechanosensitive ion channel activity
ACP92_RS20205	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
ACP92_RS20225	COG0277	FAD linked oxidase domain protein
ACP92_RS20230	COG2271	Major facilitator Superfamily
ACP92_RS20235	COG0805	protein transport
ACP92_RS20240	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
ACP92_RS20245	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
ACP92_RS20255	COG0140	phosphoribosyl-ATP diphosphatase activity
ACP92_RS20260	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
ACP92_RS20265	COG0107	imidazoleglycerol-phosphate synthase activity
ACP92_RS20270	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
ACP92_RS20280	COG0131	Imidazoleglycerol-phosphate dehydratase
ACP92_RS20285	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
ACP92_RS20295	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
ACP92_RS20300	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
ACP92_RS20305	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
ACP92_RS20310	COG0271	Belongs to the BolA IbaG family
ACP92_RS20315	COG0842	Transport permease protein
ACP92_RS20320	COG1131	(ABC) transporter
ACP92_RS20335	COG2853	Lipoprotein
ACP92_RS20340	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
ACP92_RS20345	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
ACP92_RS20350	COG1127	ABC transporter
ACP92_RS20355	COG0012	GTP binding
ACP92_RS20370	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
ACP92_RS20435	COG3550	peptidyl-serine autophosphorylation
ACP92_RS20495	COG0511	ligase activity, forming carbon-carbon bonds
ACP92_RS20500	COG0439	Biotin carboxylase
ACP92_RS20510	COG1984	allophanate hydrolase subunit 2
ACP92_RS20540	COG1012	belongs to the aldehyde dehydrogenase family
ACP92_RS20540	COG2030	dehydratase
ACP92_RS20545	COG0683	leucine binding
ACP92_RS20560	COG3396	Phenylacetate-CoA oxygenase
ACP92_RS20565	COG3460	Phenylacetate-CoA oxygenase
ACP92_RS20570	COG3396	Phenylacetate-CoA oxygenase
ACP92_RS20575	COG2151	metal-sulfur cluster biosynthetic enzyme
ACP92_RS20580	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
ACP92_RS20590	COG1024	Enoyl-CoA hydratase
ACP92_RS20595	COG1250	3-hydroxyacyl-CoA dehydrogenase
ACP92_RS20600	COG2050	protein possibly involved in aromatic compounds catabolism
ACP92_RS20610	COG0183	Belongs to the thiolase family
ACP92_RS20615	COG1024	Enoyl-CoA hydratase
ACP92_RS20635	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
ACP92_RS20640	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
ACP92_RS20645	COG0742	ribosomal rna small subunit methyltransferase
ACP92_RS20650	COG0612	Peptidase, M16
ACP92_RS20660	COG0612	Peptidase, M16
ACP92_RS20670	COG2884	Cell division ATP-binding protein ftsE
ACP92_RS20675	COG2177	Part of the ABC transporter FtsEX involved in
ACP92_RS20685	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
ACP92_RS20690	COG1999	signal sequence binding
ACP92_RS20695	COG0109	protoheme IX farnesyltransferase activity
ACP92_RS20700	COG1612	heme a metabolic process
ACP92_RS20730	COG3175	Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I
ACP92_RS20755	COG2226	methyltransferase
ACP92_RS20760	COG1040	competence protein
ACP92_RS20770	COG3638	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
ACP92_RS20780	COG2984	ABC transporter substrate binding protein
ACP92_RS20800	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
ACP92_RS20815	COG0683	leucine binding
ACP92_RS20830	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
ACP92_RS20870	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
ACP92_RS20875	COG0232	Belongs to the dGTPase family. Type 2 subfamily
ACP92_RS20895	COG2183	response to ionizing radiation
ACP92_RS20900	COG0193	aminoacyl-tRNA hydrolase activity
ACP92_RS20910	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
ACP92_RS20920	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
ACP92_RS20925	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
ACP92_RS20945	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
ACP92_RS20950	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
ACP92_RS20955	COG0367	asparagine synthase
ACP92_RS20990	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
ACP92_RS20995	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
ACP92_RS21010	COG0367	asparagine synthase
ACP92_RS21025	COG0367	asparagine synthase
ACP92_RS21045	COG1086	Polysaccharide biosynthesis protein
ACP92_RS21055	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
ACP92_RS21080	COG1871	Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis
ACP92_RS21090	COG3622	Belongs to the hyi family
ACP92_RS21095	COG2271	Major facilitator Superfamily
ACP92_RS21100	COG0235	Class ii aldolase
ACP92_RS21105	COG3395	kinase activity
ACP92_RS21110	COG2084	Dehydrogenase
ACP92_RS21115	COG2186	Transcriptional regulator
ACP92_RS21130	COG2807	transmembrane transport
ACP92_RS21135	COG2207	Transcriptional regulator
ACP92_RS21140	COG3025	triphosphatase activity
ACP92_RS21195	COG0765	amino acid transport
ACP92_RS21210	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
ACP92_RS21220	COG1953	Uracil, thiamine, allantoin
ACP92_RS21255	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
ACP92_RS21260	COG3845	ABC transporter
ACP92_RS21265	COG4603	Belongs to the binding-protein-dependent transport system permease family
ACP92_RS21270	COG1079	Belongs to the binding-protein-dependent transport system permease family
ACP92_RS21280	COG3093	addiction module antidote protein HigA
ACP92_RS21290	COG0850	regulation of cytokinetic process
ACP92_RS21300	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
ACP92_RS21310	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
ACP92_RS21315	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
ACP92_RS21320	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
ACP92_RS21325	COG2890	protein-(glutamine-N5) methyltransferase activity
ACP92_RS21335	COG1858	cytochrome C peroxidase
ACP92_RS21340	COG3186	Phenylalanine-4-hydroxylase
ACP92_RS21350	COG0617	tRNA 3'-terminal CCA addition
ACP92_RS21365	COG0741	lytic transglycosylase activity
ACP92_RS21370	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
ACP92_RS21380	COG1950	PFAM Membrane protein of
ACP92_RS21385	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
ACP92_RS21390	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
ACP92_RS21405	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
ACP92_RS21415	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
ACP92_RS21425	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
ACP92_RS21445	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
ACP92_RS21455	COG1521	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
ACP92_RS21460	COG0340	biotin-[acetyl-CoA-carboxylase] ligase activity
ACP92_RS21460	COG1654	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
ACP92_RS21475	COG2945	thiolester hydrolase activity
ACP92_RS21480	COG1686	Belongs to the peptidase S11 family
ACP92_RS21490	COG0450	alkyl hydroperoxide reductase
ACP92_RS21495	COG0824	Thioesterase
ACP92_RS21500	COG1274	phosphoenolpyruvate carboxykinase (GTP) activity
ACP92_RS21520	COG0252	asparaginase activity
ACP92_RS21525	COG0583	DNA-binding transcription factor activity
ACP92_RS21540	COG0210	DNA helicase
ACP92_RS21570	COG0765	amino acid transport
ACP92_RS21575	COG0493	'glutamate synthase
ACP92_RS21575	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
ACP92_RS21585	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
ACP92_RS21590	COG2974	May be involved in recombination
ACP92_RS21595	COG0579	oxidoreductase
ACP92_RS21600	COG1309	transcriptional regulator
ACP92_RS21605	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
ACP92_RS21620	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
ACP92_RS21625	COG0706	membrane insertase activity
ACP92_RS21630	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
ACP92_RS21635	COG0594	ribonuclease P activity
ACP92_RS21640	COG2766	serine protein kinase
ACP92_RS21645	COG2718	Belongs to the UPF0229 family
ACP92_RS21650	COG2719	SpoVR family
ACP92_RS21665	COG2271	Major facilitator Superfamily
ACP92_RS21670	COG0583	DNA-binding transcription factor activity
ACP92_RS21695	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
ACP92_RS21700	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
ACP92_RS21705	COG0300	oxidoreductase activity
ACP92_RS21710	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
ACP92_RS21720	COG0018	arginyl-trna synthetase
ACP92_RS21725	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
ACP92_RS21730	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
ACP92_RS21740	COG2326	polyphosphate kinase activity
ACP92_RS21745	COG1832	CoA-binding protein
ACP92_RS21750	COG0355	proton-transporting ATP synthase activity, rotational mechanism
ACP92_RS21755	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
ACP92_RS21760	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
ACP92_RS21765	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
ACP92_RS21770	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
ACP92_RS21775	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
ACP92_RS21785	COG0356	it plays a direct role in the translocation of protons across the membrane
ACP92_RS21815	COG2271	Major facilitator Superfamily
ACP92_RS21820	COG0154	amidase activity
ACP92_RS21835	COG3128	pkhd-type hydroxylase
ACP92_RS21855	COG2205	protein histidine kinase activity
ACP92_RS21860	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
ACP92_RS21865	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
ACP92_RS21910	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
ACP92_RS21925	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
ACP92_RS21930	COG0642	Histidine kinase
ACP92_RS21950	COG1028	Short-chain dehydrogenase reductase Sdr
ACP92_RS21960	COG4680	protein conserved in bacteria
ACP92_RS21975	COG1448	Aminotransferase
ACP92_RS21980	COG0583	DNA-binding transcription factor activity
ACP92_RS21985	COG0037	tRNA processing
ACP92_RS21995	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
ACP92_RS22000	COG1088	dTDP-glucose 4,6-dehydratase activity
ACP92_RS22015	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
ACP92_RS22035	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
ACP92_RS22060	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
ACP92_RS22085	COG1204	response to ionizing radiation
ACP92_RS22145	COG0459	protein refolding
ACP92_RS22155	COG3254	rhamnose metabolic process
ACP92_RS22160	COG1172	Belongs to the binding-protein-dependent transport system permease family
ACP92_RS22165	COG4211	Belongs to the binding-protein-dependent transport system permease family
ACP92_RS22170	COG1129	ABC transporter
ACP92_RS22175	COG1879	ABC-type sugar transport system periplasmic component
ACP92_RS22185	COG3347	Dehydrogenase
ACP92_RS22185	COG1028	Short-chain dehydrogenase reductase Sdr
ACP92_RS22190	COG4952	isomerase
ACP92_RS22205	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
ACP92_RS22210	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
ACP92_RS22230	COG0583	DNA-binding transcription factor activity
ACP92_RS22235	COG1802	Transcriptional regulator
ACP92_RS22245	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
ACP92_RS22255	COG1028	Short-chain dehydrogenase reductase Sdr
ACP92_RS22260	COG0583	DNA-binding transcription factor activity
ACP92_RS22285	COG3707	response regulator
ACP92_RS22295	COG4770	biotin carboxylase activity
ACP92_RS22305	COG3665	Urea carboxylase-associated protein
ACP92_RS22310	COG3842	ATPase activity
ACP92_RS22350	COG3712	iron ion homeostasis
ACP92_RS22370	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
ACP92_RS22375	COG0583	DNA-binding transcription factor activity
ACP92_RS22385	COG1064	alcohol dehydrogenase
ACP92_RS22405	COG2207	Transcriptional regulator
ACP92_RS22405	COG1609	Transcriptional regulator
ACP92_RS22410	COG4213	ABC transporter substrate-binding protein
ACP92_RS22415	COG1129	ABC transporter
ACP92_RS22420	COG4214	carbohydrate transport
ACP92_RS22430	COG0129	dihydroxy-acid dehydratase activity
ACP92_RS22440	COG3706	GGDEF domain
ACP92_RS22440	COG5001	Diguanylate cyclase
ACP92_RS22440	COG4251	negative regulation of phosphorylation
ACP92_RS22440	COG2203	Gaf domain
ACP92_RS22485	COG4566	intracellular signal transduction
ACP92_RS22500	COG4774	siderophore transport
ACP92_RS22510	COG1595	DNA-templated transcription, initiation
ACP92_RS22520	COG0783	Belongs to the Dps family
ACP92_RS22535	COG1574	metal-dependent hydrolase with the TIM-barrel fold
ACP92_RS22540	COG1335	isochorismatase
ACP92_RS22550	COG2204	response regulator
ACP92_RS22555	COG4191	Histidine kinase
ACP92_RS22560	COG2207	Transcriptional regulator
ACP92_RS22575	COG0583	DNA-binding transcription factor activity
ACP92_RS22580	COG1250	3-hydroxyacyl-CoA dehydrogenase
ACP92_RS22590	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
ACP92_RS22595	COG3842	ATPase activity
ACP92_RS22625	COG0840	transmembrane signaling receptor activity
ACP92_RS22630	COG2986	histidine ammonia-lyase
ACP92_RS22640	COG1301	dicarboxylic acid transport
ACP92_RS22650	COG0840	transmembrane signaling receptor activity
ACP92_RS22665	COG0667	Aldo Keto reductase
ACP92_RS22680	COG1653	transport
ACP92_RS22690	COG1175	transmembrane transport
ACP92_RS22695	COG0395	ABC-type sugar transport system, permease component
ACP92_RS22705	COG2971	BadF BadG BcrA BcrD
ACP92_RS22715	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
ACP92_RS22720	COG0583	DNA-binding transcription factor activity
ACP92_RS22725	COG3064	Membrane
ACP92_RS22730	COG0610	Subunit R is required for both nuclease and ATPase activities, but not for modification
ACP92_RS22745	COG1247	-acetyltransferase
ACP92_RS22770	COG0640	Transcriptional regulator
ACP92_RS22780	COG0625	glutathione transferase activity
ACP92_RS22790	COG2423	ornithine cyclodeaminase activity
ACP92_RS22795	COG0583	DNA-binding transcription factor activity
ACP92_RS22810	COG1056	cytidyltransferase-related domain
ACP92_RS22810	COG1051	belongs to the nudix hydrolase family
ACP92_RS22815	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
ACP92_RS22815	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
ACP92_RS22820	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
ACP92_RS22875	COG0477	Major facilitator Superfamily
ACP92_RS22880	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
ACP92_RS22890	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
ACP92_RS22905	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
ACP92_RS22920	COG2194	sulfuric ester hydrolase activity
ACP92_RS22925	COG0840	transmembrane signaling receptor activity
ACP92_RS22935	COG2814	Major facilitator Superfamily
ACP92_RS22940	COG2188	Transcriptional regulator
ACP92_RS22945	COG2944	sequence-specific DNA binding
ACP92_RS22955	COG0625	glutathione transferase activity
ACP92_RS22960	COG2271	Major facilitator Superfamily
ACP92_RS22965	COG2186	Transcriptional regulator
ACP92_RS22970	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
ACP92_RS22980	COG0765	amino acid transport
ACP92_RS22985	COG0765	amino acid transport
ACP92_RS22990	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
ACP92_RS23005	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
ACP92_RS23015	COG2205	protein histidine kinase activity
ACP92_RS23020	COG0745	RESPONSE REGULATOR receiver
ACP92_RS23030	COG1538	Outer membrane efflux protein
ACP92_RS23060	COG3474	cytochrome
ACP92_RS23105	COG4221	oxidoreductase activity
ACP92_RS23110	COG3967	Belongs to the short-chain dehydrogenases reductases (SDR) family
ACP92_RS23115	COG2814	Major facilitator Superfamily
ACP92_RS23125	COG4191	Histidine kinase
ACP92_RS23130	COG3706	GGDEF domain
ACP92_RS23130	COG2203	Gaf domain
ACP92_RS23130	COG4251	negative regulation of phosphorylation
ACP92_RS23130	COG5001	Diguanylate cyclase
ACP92_RS23145	COG4566	intracellular signal transduction
ACP92_RS23150	COG0583	DNA-binding transcription factor activity
ACP92_RS23155	COG2910	NAD(P)H-binding
ACP92_RS23175	COG0840	transmembrane signaling receptor activity
ACP92_RS23185	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
ACP92_RS23190	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
ACP92_RS23205	COG0559	Belongs to the binding-protein-dependent transport system permease family
ACP92_RS23210	COG4177	L-phenylalanine transmembrane transporter activity
ACP92_RS23235	COG0840	transmembrane signaling receptor activity
ACP92_RS23240	COG2175	clavaminate synthase activity
ACP92_RS23250	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
ACP92_RS23255	COG0154	amidase activity
ACP92_RS23260	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
ACP92_RS23265	COG1077	Cell shape determining protein MreB Mrl
ACP92_RS23270	COG1792	Involved in formation and maintenance of cell shape
ACP92_RS23280	COG0768	penicillin binding
ACP92_RS23285	COG0772	Belongs to the SEDS family
ACP92_RS23300	COG3107	peptidoglycan biosynthetic process
ACP92_RS23305	COG0792	nuclease activity
ACP92_RS23310	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
ACP92_RS23315	COG2823	Periplasmic or secreted lipoprotein
ACP92_RS23330	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
ACP92_RS23335	COG0708	Exodeoxyribonuclease III
ACP92_RS23345	COG2922	Belongs to the Smg family
ACP92_RS23350	COG0758	DNA mediated transformation
ACP92_RS23355	COG0242	peptide deformylase activity
ACP92_RS23360	COG1712	Catalyzes the reversible NADPH-dependent reductive amination of L-2-amino-6-oxopimelate, the acyclic form of L- tetrahydrodipicolinate, to generate the meso compound, D,L-2,6- diaminopimelate
ACP92_RS23365	COG0583	DNA-binding transcription factor activity
ACP92_RS23385	COG0789	Transcriptional regulator
ACP92_RS23390	COG1960	acyl-CoA dehydrogenase activity
ACP92_RS23400	COG3012	SEC-C Motif Domain Protein
ACP92_RS23405	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
ACP92_RS23410	COG4770	biotin carboxylase activity
ACP92_RS23435	COG2070	2-Nitropropane dioxygenase
ACP92_RS23445	COG0596	Alpha beta hydrolase
ACP92_RS23450	COG2223	nitrite transmembrane transporter activity
ACP92_RS23455	COG2199	diguanylate cyclase activity
ACP92_RS23455	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
ACP92_RS23470	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
ACP92_RS23485	COG0318	PFAM AMP-dependent synthetase and ligase
ACP92_RS23500	COG0488	(ABC) transporter
ACP92_RS23510	COG2814	Major facilitator Superfamily
ACP92_RS23520	COG2203	Gaf domain
ACP92_RS23520	COG3706	GGDEF domain
ACP92_RS23520	COG4251	negative regulation of phosphorylation
ACP92_RS23520	COG5001	Diguanylate cyclase
ACP92_RS23545	COG0411	ABC transporter
ACP92_RS23555	COG0829	nickel cation binding
ACP92_RS23560	COG0831	urea catabolic process
ACP92_RS23565	COG0832	Belongs to the urease beta subunit family
ACP92_RS23570	COG0804	urea catabolic process
ACP92_RS23575	COG2371	Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly
ACP92_RS23580	COG0830	nickel cation binding
ACP92_RS23585	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
ACP92_RS23600	COG3639	organic phosphonate transmembrane transporter activity
ACP92_RS23605	COG3639	organic phosphonate transmembrane transporter activity
ACP92_RS23655	COG2823	Periplasmic or secreted lipoprotein
ACP92_RS23660	COG2204	response regulator
ACP92_RS23670	COG2205	protein histidine kinase activity
ACP92_RS23675	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
ACP92_RS23680	COG2814	Major facilitator Superfamily
ACP92_RS23695	COG0302	gtp cyclohydrolase
ACP92_RS23765	COG2509	5-formyltetrahydrofolate cyclo-ligase activity
ACP92_RS23775	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
ACP92_RS23775	COG4121	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
ACP92_RS23795	COG0523	cobalamin synthesis protein
ACP92_RS23800	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
ACP92_RS23815	COG3177	Filamentation induced by cAMP protein fic
ACP92_RS23820	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
ACP92_RS23825	COG0321	lipoyl(octanoyl) transferase activity
ACP92_RS23835	COG0583	DNA-binding transcription factor activity
ACP92_RS23840	COG2921	Belongs to the UPF0250 family
ACP92_RS23860	COG4178	(ABC) transporter
ACP92_RS23865	COG0840	transmembrane signaling receptor activity
ACP92_RS23870	COG1418	mRNA catabolic process
ACP92_RS23875	COG1132	(ABC) transporter
ACP92_RS23895	COG1192	Involved in chromosome partitioning
ACP92_RS23905	COG3040	lipid binding
ACP92_RS23910	COG0357	Ribosomal RNA small subunit methyltransferase G
ACP92_RS23915	COG0445	tRNA wobble uridine modification
ACP92_RS23945	COG0411	ABC transporter
ACP92_RS23950	COG2303	Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate
ACP92_RS23960	COG0583	DNA-binding transcription factor activity
ACP92_RS23970	COG2982	Protein involved in outer membrane biogenesis
ACP92_RS23990	COG0121	glutamine amidotransferase
ACP92_RS24065	COG2273	Hydrolase Family 16
ACP92_RS24065	COG2931	calcium- and calmodulin-responsive adenylate cyclase activity