locus-tag class description HYDSHO_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix HYDSHO_RS00005 PF00308 Bacterial dnaA protein HYDSHO_RS00010 PF01925 Sulfite exporter TauE/SafE HYDSHO_RS00015 PF09334 tRNA synthetases class I (M) HYDSHO_RS00015 PF01588 Putative tRNA binding domain HYDSHO_RS00015 PF08264 Anticodon-binding domain of tRNA HYDSHO_RS00020 PF08323 Starch synthase catalytic domain HYDSHO_RS00020 PF00534 Glycosyl transferases group 1 HYDSHO_RS00025 PF00809 Pterin binding enzyme HYDSHO_RS00030 PF02457 DisA bacterial checkpoint controller nucleotide-binding HYDSHO_RS00035 PF02321 Outer membrane efflux protein HYDSHO_RS00045 PF00005 ABC transporter HYDSHO_RS00050 PF00005 ABC transporter HYDSHO_RS00050 PF02687 FtsX-like permease family HYDSHO_RS00050 PF12704 MacB-like periplasmic core domain HYDSHO_RS00065 PF03330 Lytic transglycolase HYDSHO_RS00070 PF01895 PhoU domain HYDSHO_RS00075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HYDSHO_RS00075 PF00512 His Kinase A (phospho-acceptor) domain HYDSHO_RS00075 PF00672 HAMP domain HYDSHO_RS00075 PF00989 PAS fold HYDSHO_RS00100 PF07690 Major Facilitator Superfamily HYDSHO_RS00105 PF02445 Quinolinate synthetase A protein HYDSHO_RS00110 PF14572 Phosphoribosyl synthetase-associated domain HYDSHO_RS00110 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase HYDSHO_RS00120 PF01479 S4 domain HYDSHO_RS00120 PF00849 RNA pseudouridylate synthase HYDSHO_RS00125 PF01227 GTP cyclohydrolase I HYDSHO_RS00130 PF02548 Ketopantoate hydroxymethyltransferase HYDSHO_RS00135 PF00472 RF-1 domain HYDSHO_RS00135 PF03462 PCRF domain HYDSHO_RS00145 PF00684 DnaJ central domain HYDSHO_RS00145 PF01556 DnaJ C terminal domain HYDSHO_RS00145 PF00226 DnaJ domain HYDSHO_RS00150 PF13411 MerR HTH family regulatory protein HYDSHO_RS00160 PF00483 Nucleotidyl transferase HYDSHO_RS00160 PF00132 Bacterial transferase hexapeptide (six repeats) HYDSHO_RS00165 PF00152 tRNA synthetases class II (D, K and N) HYDSHO_RS00170 PF06508 Queuosine biosynthesis protein QueC HYDSHO_RS00190 PF00202 Aminotransferase class-III HYDSHO_RS00200 PF08534 Redoxin HYDSHO_RS00205 PF01367 5'-3' exonuclease, C-terminal SAM fold HYDSHO_RS00205 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain HYDSHO_RS00210 PF02577 Bifunctional nuclease HYDSHO_RS00230 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HYDSHO_RS00245 PF02492 CobW/HypB/UreG, nucleotide-binding domain HYDSHO_RS00250 PF04809 HupH hydrogenase expression protein, C-terminal conserved region HYDSHO_RS00255 PF07503 HypF finger HYDSHO_RS00255 PF01300 Telomere recombination HYDSHO_RS00255 PF17788 HypF Kae1-like domain HYDSHO_RS00255 PF00708 Acylphosphatase HYDSHO_RS00260 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA HYDSHO_RS00265 PF02769 AIR synthase related protein, C-terminal domain HYDSHO_RS00265 PF00586 AIR synthase related protein, N-terminal domain HYDSHO_RS00270 PF01924 Hydrogenase formation hypA family HYDSHO_RS00275 PF01455 HupF/HypC family HYDSHO_RS00280 PF01750 Hydrogenase maturation protease HYDSHO_RS00285 PF01292 Prokaryotic cytochrome b561 HYDSHO_RS00290 PF00374 Nickel-dependent hydrogenase HYDSHO_RS00295 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit HYDSHO_RS00295 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal HYDSHO_RS00320 PF03190 Protein of unknown function, DUF255 HYDSHO_RS00330 PF00575 S1 RNA binding domain HYDSHO_RS00335 PF03819 MazG nucleotide pyrophosphohydrolase domain HYDSHO_RS00345 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain HYDSHO_RS00345 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain HYDSHO_RS00355 PF01872 RibD C-terminal domain HYDSHO_RS00365 PF01113 Dihydrodipicolinate reductase, N-terminus HYDSHO_RS00365 PF05173 Dihydrodipicolinate reductase, C-terminus HYDSHO_RS00375 PF00830 Ribosomal L28 family HYDSHO_RS00380 PF01370 NAD dependent epimerase/dehydratase family HYDSHO_RS00380 PF08338 Domain of unknown function (DUF1731) HYDSHO_RS00385 PF01106 NifU-like domain HYDSHO_RS00390 PF02777 Iron/manganese superoxide dismutases, C-terminal domain HYDSHO_RS00390 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain HYDSHO_RS00395 PF12804 MobA-like NTP transferase domain HYDSHO_RS00400 PF01464 Transglycosylase SLT domain HYDSHO_RS00400 PF01476 LysM domain HYDSHO_RS00405 PF00263 Bacterial type II and III secretion system protein HYDSHO_RS00405 PF03958 Bacterial type II/III secretion system short domain HYDSHO_RS00410 PF02675 S-adenosylmethionine decarboxylase HYDSHO_RS00415 PF17782 DprA winged helix domain HYDSHO_RS00415 PF02481 DNA recombination-mediator protein A HYDSHO_RS00445 PF08402 TOBE domain HYDSHO_RS00445 PF00005 ABC transporter HYDSHO_RS00450 PF03471 Transporter associated domain HYDSHO_RS00450 PF00571 CBS domain HYDSHO_RS00455 PF00156 Phosphoribosyl transferase domain HYDSHO_RS00460 PF13193 AMP-binding enzyme C-terminal domain HYDSHO_RS00460 PF16177 Acetyl-coenzyme A synthetase N-terminus HYDSHO_RS00460 PF00501 AMP-binding enzyme HYDSHO_RS00465 PF02142 MGS-like domain HYDSHO_RS00465 PF01808 AICARFT/IMPCHase bienzyme HYDSHO_RS00490 PF13288 DXP reductoisomerase C-terminal domain HYDSHO_RS00490 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase HYDSHO_RS00490 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain HYDSHO_RS00495 PF02222 ATP-grasp domain HYDSHO_RS00505 PF04055 Radical SAM superfamily HYDSHO_RS00505 PF12544 Lysine-2,3-aminomutase HYDSHO_RS00525 PF00158 Sigma-54 interaction domain HYDSHO_RS00525 PF01590 GAF domain HYDSHO_RS00550 PF02661 Fic/DOC family HYDSHO_RS00550 PF12728 Helix-turn-helix domain HYDSHO_RS00565 PF11867 Domain of unknown function (DUF3387) HYDSHO_RS00565 PF18766 SWI2/SNF2 ATPase HYDSHO_RS00565 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) HYDSHO_RS00580 PF00216 Bacterial DNA-binding protein HYDSHO_RS00595 PF00829 Ribosomal prokaryotic L21 protein HYDSHO_RS00600 PF01016 Ribosomal L27 protein HYDSHO_RS00605 PF17932 Tetracyclin repressor-like, C-terminal domain HYDSHO_RS00605 PF00440 Bacterial regulatory proteins, tetR family HYDSHO_RS00615 PF00291 Pyridoxal-phosphate dependent enzyme HYDSHO_RS00625 PF02597 ThiS family HYDSHO_RS00635 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE HYDSHO_RS00650 PF01746 tRNA (Guanine-1)-methyltransferase HYDSHO_RS00660 PF01842 ACT domain HYDSHO_RS00660 PF01817 Chorismate mutase type II HYDSHO_RS00660 PF00800 Prephenate dehydratase HYDSHO_RS00670 PF02355 Protein export membrane protein HYDSHO_RS00670 PF07549 SecD/SecF GG Motif HYDSHO_RS00675 PF07992 Pyridine nucleotide-disulphide oxidoreductase HYDSHO_RS00685 PF02223 Thymidylate kinase HYDSHO_RS00690 PF00772 DnaB-like helicase N terminal domain HYDSHO_RS00690 PF03796 DnaB-like helicase C terminal domain HYDSHO_RS00700 PF00120 Glutamine synthetase, catalytic domain HYDSHO_RS00700 PF03951 Glutamine synthetase, beta-Grasp domain HYDSHO_RS00705 PF00543 Nitrogen regulatory protein P-II HYDSHO_RS00710 PF01967 MoaC family HYDSHO_RS00715 PF01048 Phosphorylase superfamily HYDSHO_RS00730 PF01820 D-ala D-ala ligase N-terminus HYDSHO_RS00730 PF07478 D-ala D-ala ligase C-terminus HYDSHO_RS00735 PF01565 FAD binding domain HYDSHO_RS00735 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain HYDSHO_RS00745 PF00563 EAL domain HYDSHO_RS00745 PF00990 Diguanylate cyclase, GGDEF domain HYDSHO_RS00745 PF03707 Bacterial signalling protein N terminal repeat HYDSHO_RS00755 PF00312 Ribosomal protein S15 HYDSHO_RS00760 PF01138 3' exoribonuclease family, domain 1 HYDSHO_RS00760 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain HYDSHO_RS00760 PF00575 S1 RNA binding domain HYDSHO_RS00760 PF00013 KH domain HYDSHO_RS00760 PF03725 3' exoribonuclease family, domain 2 HYDSHO_RS00765 PF00692 dUTPase HYDSHO_RS00770 PF02885 Glycosyl transferase family, helical bundle domain HYDSHO_RS00770 PF00591 Glycosyl transferase family, a/b domain HYDSHO_RS00780 PF07724 AAA domain (Cdc48 subfamily) HYDSHO_RS00780 PF06689 ClpX C4-type zinc finger HYDSHO_RS00780 PF10431 C-terminal, D2-small domain, of ClpB protein HYDSHO_RS00785 PF00574 Clp protease HYDSHO_RS00790 PF05698 Bacterial trigger factor protein (TF) C-terminus HYDSHO_RS00790 PF05697 Bacterial trigger factor protein (TF) HYDSHO_RS00800 PF01042 Endoribonuclease L-PSP HYDSHO_RS00805 PF12327 FtsZ family, C-terminal domain HYDSHO_RS00805 PF00091 Tubulin/FtsZ family, GTPase domain HYDSHO_RS00815 PF06472 ABC transporter transmembrane region 2 HYDSHO_RS00815 PF00005 ABC transporter HYDSHO_RS00820 PF13144 Chaperone for flagella basal body P-ring formation HYDSHO_RS00825 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HYDSHO_RS00825 PF00460 Flagella basal body rod protein HYDSHO_RS00835 PF07963 Prokaryotic N-terminal methylation motif HYDSHO_RS00845 PF14698 Argininosuccinate lyase C-terminal HYDSHO_RS00845 PF00206 Lyase HYDSHO_RS00855 PF04055 Radical SAM superfamily HYDSHO_RS00855 PF18693 TRAM domain HYDSHO_RS00855 PF00919 Uncharacterized protein family UPF0004 HYDSHO_RS00860 PF02772 S-adenosylmethionine synthetase, central domain HYDSHO_RS00860 PF02773 S-adenosylmethionine synthetase, C-terminal domain HYDSHO_RS00860 PF00438 S-adenosylmethionine synthetase, N-terminal domain HYDSHO_RS00865 PF01380 SIS domain HYDSHO_RS00865 PF10432 Bacterial phospho-glucose isomerase C-terminal SIS domain HYDSHO_RS00870 PF00708 Acylphosphatase HYDSHO_RS00875 PF01551 Peptidase family M23 HYDSHO_RS00875 PF01476 LysM domain HYDSHO_RS00875 PF01551 Peptidase family M23 HYDSHO_RS00875 PF01476 LysM domain HYDSHO_RS00880 PF00719 Inorganic pyrophosphatase HYDSHO_RS00885 PF01380 SIS domain HYDSHO_RS00885 PF00571 CBS domain HYDSHO_RS00890 PF01066 CDP-alcohol phosphatidyltransferase HYDSHO_RS00910 PF00460 Flagella basal body rod protein HYDSHO_RS00910 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HYDSHO_RS00915 PF02049 Flagellar hook-basal body complex protein FliE HYDSHO_RS00920 PF08345 Flagellar M-ring protein C-terminal HYDSHO_RS00920 PF01514 Secretory protein of YscJ/FliF family HYDSHO_RS00925 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term HYDSHO_RS00925 PF02154 Flagellar motor switch protein FliM HYDSHO_RS00930 PF16973 Flagellar motor switch protein FliN N-terminal HYDSHO_RS00930 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term HYDSHO_RS00935 PF00294 pfkB family carbohydrate kinase HYDSHO_RS00955 PF00005 ABC transporter HYDSHO_RS00960 PF02405 Permease MlaE HYDSHO_RS00970 PF02492 CobW/HypB/UreG, nucleotide-binding domain HYDSHO_RS00970 PF07683 Cobalamin synthesis protein cobW C-terminal domain HYDSHO_RS00995 PF01609 Transposase DDE domain HYDSHO_RS01000 PF03309 Type III pantothenate kinase HYDSHO_RS01005 PF00478 IMP dehydrogenase / GMP reductase domain HYDSHO_RS01005 PF00571 CBS domain HYDSHO_RS01010 PF02416 mttA/Hcf106 family HYDSHO_RS01015 PF02416 mttA/Hcf106 family HYDSHO_RS01025 PF03099 Biotin/lipoate A/B protein ligase family HYDSHO_RS01025 PF08279 HTH domain HYDSHO_RS01025 PF02237 Biotin protein ligase C terminal domain HYDSHO_RS01035 PF00132 Bacterial transferase hexapeptide (six repeats) HYDSHO_RS01035 PF14602 Hexapeptide repeat of succinyl-transferase HYDSHO_RS01050 PF12170 DNA polymerase III tau subunit V interacting with alpha HYDSHO_RS01050 PF12169 DNA polymerase III subunits gamma and tau domain III HYDSHO_RS01060 PF03652 Holliday junction resolvase HYDSHO_RS01065 PF00990 Diguanylate cyclase, GGDEF domain HYDSHO_RS01065 PF03707 Bacterial signalling protein N terminal repeat HYDSHO_RS01065 PF00563 EAL domain HYDSHO_RS01070 PF00563 EAL domain HYDSHO_RS01070 PF05231 MASE1 HYDSHO_RS01085 PF01098 Cell cycle protein HYDSHO_RS01090 PF03033 Glycosyltransferase family 28 N-terminal domain HYDSHO_RS01090 PF04101 Glycosyltransferase family 28 C-terminal domain HYDSHO_RS01095 PF00072 Response regulator receiver domain HYDSHO_RS01095 PF00990 Diguanylate cyclase, GGDEF domain HYDSHO_RS01105 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit HYDSHO_RS01105 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region HYDSHO_RS01105 PF10531 SLBB domain HYDSHO_RS01110 PF00920 Dehydratase family HYDSHO_RS01115 PF01702 Queuine tRNA-ribosyltransferase HYDSHO_RS01125 PF01487 Type I 3-dehydroquinase HYDSHO_RS01130 PF01264 Chorismate synthase HYDSHO_RS01140 PF00132 Bacterial transferase hexapeptide (six repeats) HYDSHO_RS01170 PF01370 NAD dependent epimerase/dehydratase family HYDSHO_RS01175 PF00291 Pyridoxal-phosphate dependent enzyme HYDSHO_RS01185 PF01783 Ribosomal L32p protein family HYDSHO_RS01190 PF02504 Fatty acid synthesis protein HYDSHO_RS01195 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III HYDSHO_RS01195 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal HYDSHO_RS01205 PF00174 Oxidoreductase molybdopterin binding domain HYDSHO_RS01210 PF02541 Ppx/GppA phosphatase family HYDSHO_RS01220 PF17863 AAA lid domain HYDSHO_RS01220 PF07726 ATPase family associated with various cellular activities (AAA) HYDSHO_RS01225 PF00072 Response regulator receiver domain HYDSHO_RS01225 PF00990 Diguanylate cyclase, GGDEF domain HYDSHO_RS01235 PF13662 Toprim domain HYDSHO_RS01235 PF02132 RecR protein HYDSHO_RS01240 PF00437 Type II/IV secretion system protein HYDSHO_RS01245 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain HYDSHO_RS01245 PF00437 Type II/IV secretion system protein HYDSHO_RS01250 PF17915 Reverse gyrase zinc finger HYDSHO_RS01250 PF00270 DEAD/DEAH box helicase HYDSHO_RS01250 PF01131 DNA topoisomerase HYDSHO_RS01250 PF01751 Toprim domain HYDSHO_RS01255 PF00156 Phosphoribosyl transferase domain HYDSHO_RS01275 PF03143 Elongation factor Tu C-terminal domain HYDSHO_RS01275 PF03144 Elongation factor Tu domain 2 HYDSHO_RS01275 PF00009 Elongation factor Tu GTP binding domain HYDSHO_RS01285 PF00584 SecE/Sec61-gamma subunits of protein translocation complex HYDSHO_RS01290 PF00467 KOW motif HYDSHO_RS01290 PF02357 Transcription termination factor nusG HYDSHO_RS01290 PF07009 NusG domain II HYDSHO_RS01295 PF03946 Ribosomal protein L11, N-terminal domain HYDSHO_RS01295 PF00298 Ribosomal protein L11, RNA binding domain HYDSHO_RS01300 PF00687 Ribosomal protein L1p/L10e family HYDSHO_RS01305 PF00466 Ribosomal protein L10 HYDSHO_RS01310 PF00542 Ribosomal protein L7/L12 C-terminal domain HYDSHO_RS01310 PF16320 Ribosomal protein L7/L12 dimerisation domain HYDSHO_RS01315 PF04563 RNA polymerase beta subunit HYDSHO_RS01315 PF04560 RNA polymerase Rpb2, domain 7 HYDSHO_RS01315 PF04561 RNA polymerase Rpb2, domain 2 HYDSHO_RS01315 PF00562 RNA polymerase Rpb2, domain 6 HYDSHO_RS01315 PF04565 RNA polymerase Rpb2, domain 3 HYDSHO_RS01315 PF10385 RNA polymerase beta subunit external 1 domain HYDSHO_RS01320 PF00623 RNA polymerase Rpb1, domain 2 HYDSHO_RS01320 PF04983 RNA polymerase Rpb1, domain 3 HYDSHO_RS01320 PF05000 RNA polymerase Rpb1, domain 4 HYDSHO_RS01320 PF04997 RNA polymerase Rpb1, domain 1 HYDSHO_RS01320 PF04998 RNA polymerase Rpb1, domain 5 HYDSHO_RS01325 PF00164 Ribosomal protein S12/S23 HYDSHO_RS01330 PF00177 Ribosomal protein S7p/S5e HYDSHO_RS01335 PF14492 Elongation Factor G, domain II HYDSHO_RS01335 PF03764 Elongation factor G, domain IV HYDSHO_RS01335 PF00679 Elongation factor G C-terminus HYDSHO_RS01335 PF00009 Elongation factor Tu GTP binding domain HYDSHO_RS01335 PF03144 Elongation factor Tu domain 2 HYDSHO_RS01340 PF00009 Elongation factor Tu GTP binding domain HYDSHO_RS01340 PF03144 Elongation factor Tu domain 2 HYDSHO_RS01340 PF03143 Elongation factor Tu C-terminal domain HYDSHO_RS01345 PF00338 Ribosomal protein S10p/S20e HYDSHO_RS01350 PF00297 Ribosomal protein L3 HYDSHO_RS01355 PF00573 Ribosomal protein L4/L1 family HYDSHO_RS01360 PF00276 Ribosomal protein L23 HYDSHO_RS01365 PF03947 Ribosomal Proteins L2, C-terminal domain HYDSHO_RS01365 PF00181 Ribosomal Proteins L2, RNA binding domain HYDSHO_RS01370 PF00203 Ribosomal protein S19 HYDSHO_RS01375 PF00237 Ribosomal protein L22p/L17e HYDSHO_RS01380 PF07650 KH domain HYDSHO_RS01380 PF00189 Ribosomal protein S3, C-terminal domain HYDSHO_RS01385 PF00252 Ribosomal protein L16p/L10e HYDSHO_RS01390 PF00831 Ribosomal L29 protein HYDSHO_RS01395 PF00366 Ribosomal protein S17 HYDSHO_RS01400 PF00238 Ribosomal protein L14p/L23e HYDSHO_RS01405 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 HYDSHO_RS01410 PF00281 Ribosomal protein L5 HYDSHO_RS01410 PF00673 ribosomal L5P family C-terminus HYDSHO_RS01415 PF00253 Ribosomal protein S14p/S29e HYDSHO_RS01420 PF00410 Ribosomal protein S8 HYDSHO_RS01425 PF00347 Ribosomal protein L6 HYDSHO_RS01430 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast HYDSHO_RS01435 PF00333 Ribosomal protein S5, N-terminal domain HYDSHO_RS01435 PF03719 Ribosomal protein S5, C-terminal domain HYDSHO_RS01440 PF00327 Ribosomal protein L30p/L7e HYDSHO_RS01445 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A HYDSHO_RS01450 PF00344 SecY translocase HYDSHO_RS01455 PF05191 Adenylate kinase, active site lid HYDSHO_RS01460 PF00557 Metallopeptidase family M24 HYDSHO_RS01465 PF01176 Translation initiation factor 1A / IF-1 HYDSHO_RS01470 PF00444 Ribosomal protein L36 HYDSHO_RS01475 PF00416 Ribosomal protein S13/S18 HYDSHO_RS01480 PF00411 Ribosomal protein S11 HYDSHO_RS01485 PF01479 S4 domain HYDSHO_RS01485 PF00163 Ribosomal protein S4/S9 N-terminal domain HYDSHO_RS01490 PF01000 RNA polymerase Rpb3/RpoA insert domain HYDSHO_RS01490 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain HYDSHO_RS01490 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain HYDSHO_RS01495 PF01196 Ribosomal protein L17 HYDSHO_RS01500 PF02325 YGGT family HYDSHO_RS01505 PF00448 SRP54-type protein, GTPase domain HYDSHO_RS01505 PF02881 SRP54-type protein, helical bundle domain HYDSHO_RS01505 PF02978 Signal peptide binding domain HYDSHO_RS01510 PF00886 Ribosomal protein S16 HYDSHO_RS01520 PF00270 DEAD/DEAH box helicase HYDSHO_RS01520 PF00271 Helicase conserved C-terminal domain HYDSHO_RS01525 PF08543 Phosphomethylpyrimidine kinase HYDSHO_RS01530 PF00005 ABC transporter HYDSHO_RS01530 PF12399 Branched-chain amino acid ATP-binding cassette transporter HYDSHO_RS01550 PF13085 2Fe-2S iron-sulfur cluster binding domain HYDSHO_RS01550 PF13183 4Fe-4S dicluster domain HYDSHO_RS01555 PF01467 Cytidylyltransferase-like HYDSHO_RS01560 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HYDSHO_RS01560 PF00384 Molybdopterin oxidoreductase HYDSHO_RS01560 PF01568 Molydopterin dinucleotide binding domain HYDSHO_RS01565 PF13247 4Fe-4S dicluster domain HYDSHO_RS01585 PF08032 RNA 2'-O ribose methyltransferase substrate binding HYDSHO_RS01585 PF00588 SpoU rRNA Methylase family HYDSHO_RS01590 PF00384 Molybdopterin oxidoreductase HYDSHO_RS01590 PF18465 Rieske 3Fe-4S HYDSHO_RS01590 PF01568 Molydopterin dinucleotide binding domain HYDSHO_RS01595 PF00355 Rieske [2Fe-2S] domain HYDSHO_RS01600 PF02954 Bacterial regulatory protein, Fis family HYDSHO_RS01600 PF00072 Response regulator receiver domain HYDSHO_RS01600 PF00158 Sigma-54 interaction domain HYDSHO_RS01605 PF02348 Cytidylyltransferase HYDSHO_RS01620 PF13442 Cytochrome C oxidase, cbb3-type, subunit III HYDSHO_RS01630 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HYDSHO_RS01630 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HYDSHO_RS01640 PF02578 Multi-copper polyphenol oxidoreductase laccase HYDSHO_RS01645 PF00291 Pyridoxal-phosphate dependent enzyme HYDSHO_RS01660 PF00696 Amino acid kinase family HYDSHO_RS01665 PF07992 Pyridine nucleotide-disulphide oxidoreductase HYDSHO_RS01665 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HYDSHO_RS01675 PF05193 Peptidase M16 inactive domain HYDSHO_RS01695 PF17932 Tetracyclin repressor-like, C-terminal domain HYDSHO_RS01695 PF00440 Bacterial regulatory proteins, tetR family HYDSHO_RS01705 PF00364 Biotin-requiring enzyme HYDSHO_RS01710 PF08207 Elongation factor P (EF-P) KOW-like domain HYDSHO_RS01710 PF09285 Elongation factor P, C-terminal HYDSHO_RS01710 PF01132 Elongation factor P (EF-P) OB domain HYDSHO_RS01720 PF00701 Dihydrodipicolinate synthetase family HYDSHO_RS01725 PF09334 tRNA synthetases class I (M) HYDSHO_RS01725 PF00133 tRNA synthetases class I (I, L, M and V) HYDSHO_RS01725 PF08264 Anticodon-binding domain of tRNA HYDSHO_RS01735 PF04456 Protein of unknown function (DUF503) HYDSHO_RS01755 PF02405 Permease MlaE HYDSHO_RS01765 PF00892 EamA-like transporter family HYDSHO_RS01770 PF01370 NAD dependent epimerase/dehydratase family HYDSHO_RS01775 PF02502 Ribose/Galactose Isomerase HYDSHO_RS01780 PF02637 GatB domain HYDSHO_RS01780 PF02934 GatB/GatE catalytic domain HYDSHO_RS01785 PF00521 DNA gyrase/topoisomerase IV, subunit A HYDSHO_RS01785 PF03989 DNA gyrase C-terminal domain, beta-propeller HYDSHO_RS01790 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HYDSHO_RS01790 PF02403 Seryl-tRNA synthetase N-terminal domain HYDSHO_RS01795 PF00475 Imidazoleglycerol-phosphate dehydratase HYDSHO_RS01820 PF03717 Penicillin-binding Protein dimerisation domain HYDSHO_RS01820 PF00905 Penicillin binding protein transpeptidase domain HYDSHO_RS01825 PF02630 SCO1/SenC HYDSHO_RS01835 PF00486 Transcriptional regulatory protein, C terminal HYDSHO_RS01835 PF00072 Response regulator receiver domain HYDSHO_RS01840 PF09456 RcsC Alpha-Beta-Loop (ABL) HYDSHO_RS01840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HYDSHO_RS01840 PF00072 Response regulator receiver domain HYDSHO_RS01840 PF00512 His Kinase A (phospho-acceptor) domain HYDSHO_RS01845 PF01594 AI-2E family transporter HYDSHO_RS01850 PF01926 50S ribosome-binding GTPase HYDSHO_RS01855 PF00579 tRNA synthetases class I (W and Y) HYDSHO_RS01860 PF02163 Peptidase family M50 HYDSHO_RS01875 PF01008 Initiation factor 2 subunit family HYDSHO_RS01875 PF03061 Thioesterase superfamily HYDSHO_RS01890 PF01339 CheB methylesterase HYDSHO_RS01890 PF00072 Response regulator receiver domain HYDSHO_RS01895 PF02673 Bacitracin resistance protein BacA HYDSHO_RS01910 PF09383 NIL domain HYDSHO_RS01910 PF00005 ABC transporter HYDSHO_RS01915 PF01618 MotA/TolQ/ExbB proton channel family HYDSHO_RS01920 PF02472 Biopolymer transport protein ExbD/TolR HYDSHO_RS01930 PF01106 NifU-like domain HYDSHO_RS01930 PF01521 Iron-sulphur cluster biosynthesis HYDSHO_RS01940 PF01206 Sulfurtransferase TusA HYDSHO_RS01950 PF01592 NifU-like N terminal domain HYDSHO_RS01955 PF00586 AIR synthase related protein, N-terminal domain HYDSHO_RS01955 PF02769 AIR synthase related protein, C-terminal domain HYDSHO_RS01960 PF02834 LigT like Phosphoesterase HYDSHO_RS01970 PF01118 Semialdehyde dehydrogenase, NAD binding domain HYDSHO_RS01970 PF02774 Semialdehyde dehydrogenase, dimerisation domain HYDSHO_RS01990 PF03485 Arginyl tRNA synthetase N terminal domain HYDSHO_RS01990 PF05746 DALR anticodon binding domain HYDSHO_RS01990 PF00750 tRNA synthetases class I (R) HYDSHO_RS02005 PF08011 PD-(D/E)XK nuclease superfamily HYDSHO_RS02005 PF09820 Predicted AAA-ATPase HYDSHO_RS02020 PF01867 CRISPR associated protein Cas1 HYDSHO_RS02040 PF00929 Exonuclease HYDSHO_RS02045 PF09312 SurA N-terminal domain HYDSHO_RS02045 PF00639 PPIC-type PPIASE domain HYDSHO_RS02055 PF01467 Cytidylyltransferase-like HYDSHO_RS02075 PF00384 Molybdopterin oxidoreductase HYDSHO_RS02075 PF12838 4Fe-4S dicluster domain HYDSHO_RS02075 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HYDSHO_RS02075 PF01568 Molydopterin dinucleotide binding domain HYDSHO_RS02075 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region HYDSHO_RS02080 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family HYDSHO_RS02090 PF01134 Glucose inhibited division protein A HYDSHO_RS02090 PF13932 GidA associated domain HYDSHO_RS02100 PF00155 Aminotransferase class I and II HYDSHO_RS02105 PF17746 SfsA N-terminal OB domain HYDSHO_RS02105 PF03749 Sugar fermentation stimulation protein RE domain HYDSHO_RS02115 PF13439 Glycosyltransferase Family 4 HYDSHO_RS02115 PF00534 Glycosyl transferases group 1 HYDSHO_RS02130 PF00924 Mechanosensitive ion channel HYDSHO_RS02135 PF03458 UPF0126 domain HYDSHO_RS02140 PF01134 Glucose inhibited division protein A HYDSHO_RS02145 PF13393 Histidyl-tRNA synthetase HYDSHO_RS02150 PF04453 LPS transport system D HYDSHO_RS02170 PF00694 Aconitase C-terminal domain HYDSHO_RS02175 PF00156 Phosphoribosyl transferase domain HYDSHO_RS02180 PF01728 FtsJ-like methyltransferase HYDSHO_RS02180 PF01479 S4 domain HYDSHO_RS02185 PF00905 Penicillin binding protein transpeptidase domain HYDSHO_RS02185 PF00912 Transglycosylase HYDSHO_RS02190 PF00977 Histidine biosynthesis protein HYDSHO_RS02205 PF03948 Ribosomal protein L9, C-terminal domain HYDSHO_RS02205 PF01281 Ribosomal protein L9, N-terminal domain HYDSHO_RS02210 PF01084 Ribosomal protein S18 HYDSHO_RS02215 PF00436 Single-strand binding protein family HYDSHO_RS02220 PF01250 Ribosomal protein S6 HYDSHO_RS02225 PF09820 Predicted AAA-ATPase HYDSHO_RS02225 PF08011 PD-(D/E)XK nuclease superfamily HYDSHO_RS02235 PF00005 ABC transporter HYDSHO_RS02250 PF02040 Arsenical pump membrane protein HYDSHO_RS02260 PF01472 PUA domain HYDSHO_RS02260 PF00696 Amino acid kinase family HYDSHO_RS02265 PF01632 Ribosomal protein L35 HYDSHO_RS02270 PF05198 Translation initiation factor IF-3, N-terminal domain HYDSHO_RS02270 PF00707 Translation initiation factor IF-3, C-terminal domain HYDSHO_RS02275 PF13307 Helicase C-terminal domain HYDSHO_RS02275 PF04851 Type III restriction enzyme, res subunit HYDSHO_RS02275 PF00929 Exonuclease HYDSHO_RS02280 PF02938 GAD domain HYDSHO_RS02280 PF00152 tRNA synthetases class II (D, K and N) HYDSHO_RS02280 PF01336 OB-fold nucleic acid binding domain HYDSHO_RS02290 PF01654 Cytochrome bd terminal oxidase subunit I HYDSHO_RS02295 PF02322 Cytochrome bd terminal oxidase subunit II HYDSHO_RS02300 PF01018 GTP1/OBG HYDSHO_RS02300 PF01926 50S ribosome-binding GTPase HYDSHO_RS02305 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HYDSHO_RS02305 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HYDSHO_RS02315 PF01230 HIT domain HYDSHO_RS02325 PF01266 FAD dependent oxidoreductase HYDSHO_RS02325 PF05430 S-adenosyl-L-methionine-dependent methyltransferase HYDSHO_RS02330 PF00586 AIR synthase related protein, N-terminal domain HYDSHO_RS02330 PF02769 AIR synthase related protein, C-terminal domain HYDSHO_RS02340 PF00753 Metallo-beta-lactamase superfamily HYDSHO_RS02355 PF12911 N-terminal TM domain of oligopeptide transport permease C HYDSHO_RS02355 PF00528 Binding-protein-dependent transport system inner membrane component HYDSHO_RS02360 PF01557 Fumarylacetoacetate (FAA) hydrolase family HYDSHO_RS02365 PF06470 SMC proteins Flexible Hinge Domain HYDSHO_RS02365 PF02463 RecF/RecN/SMC N terminal domain HYDSHO_RS02370 PF00764 Arginosuccinate synthase HYDSHO_RS02380 PF00155 Aminotransferase class I and II HYDSHO_RS02385 PF03966 Trm112p-like protein HYDSHO_RS02390 PF01565 FAD binding domain HYDSHO_RS02390 PF04030 D-arabinono-1,4-lactone oxidase HYDSHO_RS02395 PF01926 50S ribosome-binding GTPase HYDSHO_RS02395 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal HYDSHO_RS02400 PF01960 ArgJ family HYDSHO_RS02405 PF01327 Polypeptide deformylase HYDSHO_RS02420 PF00206 Lyase HYDSHO_RS02420 PF10415 Fumarase C C-terminus HYDSHO_RS02425 PF00202 Aminotransferase class-III HYDSHO_RS02445 PF00464 Serine hydroxymethyltransferase HYDSHO_RS02450 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain HYDSHO_RS02450 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain HYDSHO_RS02450 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain HYDSHO_RS02455 PF01709 Transcriptional regulator HYDSHO_RS02460 PF05573 NosL HYDSHO_RS02460 PF08220 DeoR-like helix-turn-helix domain HYDSHO_RS02475 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HYDSHO_RS02475 PF01872 RibD C-terminal domain HYDSHO_RS02480 PF02547 Queuosine biosynthesis protein HYDSHO_RS02490 PF02511 Thymidylate synthase complementing protein HYDSHO_RS02500 PF00550 Phosphopantetheine attachment site HYDSHO_RS02505 PF00109 Beta-ketoacyl synthase, N-terminal domain HYDSHO_RS02505 PF02801 Beta-ketoacyl synthase, C-terminal domain HYDSHO_RS02510 PF00035 Double-stranded RNA binding motif HYDSHO_RS02510 PF14622 Ribonuclease-III-like HYDSHO_RS02525 PF01926 50S ribosome-binding GTPase HYDSHO_RS02525 PF06071 Protein of unknown function (DUF933) HYDSHO_RS02530 PF03129 Anticodon binding domain HYDSHO_RS02530 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HYDSHO_RS02530 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HYDSHO_RS02540 PF01434 Peptidase family M41 HYDSHO_RS02540 PF00004 ATPase family associated with various cellular activities (AAA) HYDSHO_RS02540 PF17862 AAA+ lid domain HYDSHO_RS02540 PF06480 FtsH Extracellular HYDSHO_RS02545 PF00330 Aconitase family (aconitate hydratase) HYDSHO_RS02555 PF01648 4'-phosphopantetheinyl transferase superfamily HYDSHO_RS02560 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain HYDSHO_RS02560 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain HYDSHO_RS02570 PF05221 S-adenosyl-L-homocysteine hydrolase HYDSHO_RS02570 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain HYDSHO_RS02575 PF02913 FAD linked oxidases, C-terminal domain HYDSHO_RS02575 PF01565 FAD binding domain HYDSHO_RS02585 PF00482 Type II secretion system (T2SS), protein F HYDSHO_RS02595 PF03958 Bacterial type II/III secretion system short domain HYDSHO_RS02595 PF00263 Bacterial type II and III secretion system protein HYDSHO_RS02630 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HYDSHO_RS02635 PF00155 Aminotransferase class I and II HYDSHO_RS02650 PF00528 Binding-protein-dependent transport system inner membrane component HYDSHO_RS02655 PF00476 DNA polymerase family A HYDSHO_RS02655 PF01612 3'-5' exonuclease HYDSHO_RS02660 PF13520 Amino acid permease HYDSHO_RS02665 PF00171 Aldehyde dehydrogenase family HYDSHO_RS02670 PF00490 Delta-aminolevulinic acid dehydratase HYDSHO_RS02680 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) HYDSHO_RS02685 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) HYDSHO_RS02690 PF01979 Amidohydrolase family HYDSHO_RS02695 PF00885 6,7-dimethyl-8-ribityllumazine synthase HYDSHO_RS02705 PF01695 IstB-like ATP binding protein HYDSHO_RS02705 PF07319 Primosomal protein DnaI N-terminus HYDSHO_RS02710 PF07690 Major Facilitator Superfamily HYDSHO_RS02715 PF02142 MGS-like domain HYDSHO_RS02715 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HYDSHO_RS02720 PF00425 chorismate binding enzyme HYDSHO_RS02720 PF04715 Anthranilate synthase component I, N terminal region HYDSHO_RS02745 PF05362 Lon protease (S16) C-terminal proteolytic domain HYDSHO_RS02745 PF00004 ATPase family associated with various cellular activities (AAA) HYDSHO_RS02745 PF02190 ATP-dependent protease La (LON) substrate-binding domain HYDSHO_RS02750 PF00692 dUTPase HYDSHO_RS02755 PF01464 Transglycosylase SLT domain HYDSHO_RS02760 PF13393 Histidyl-tRNA synthetase HYDSHO_RS02760 PF03129 Anticodon binding domain HYDSHO_RS02765 PF04324 BFD-like [2Fe-2S] binding domain HYDSHO_RS02765 PF01077 Nitrite and sulphite reductase 4Fe-4S domain HYDSHO_RS02765 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain HYDSHO_RS02765 PF07992 Pyridine nucleotide-disulphide oxidoreductase HYDSHO_RS02765 PF13806 Rieske-like [2Fe-2S] domain HYDSHO_RS02765 PF18267 Rubredoxin NAD+ reductase C-terminal domain HYDSHO_RS02770 PF02789 Cytosol aminopeptidase family, N-terminal domain HYDSHO_RS02770 PF00883 Cytosol aminopeptidase family, catalytic domain HYDSHO_RS02775 PF00155 Aminotransferase class I and II HYDSHO_RS02785 PF00672 HAMP domain HYDSHO_RS02785 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HYDSHO_RS02785 PF02743 Cache domain HYDSHO_RS02790 PF01914 MarC family integral membrane protein HYDSHO_RS02800 PF00873 AcrB/AcrD/AcrF family HYDSHO_RS02815 PF01451 Low molecular weight phosphotyrosine protein phosphatase HYDSHO_RS02820 PF01022 Bacterial regulatory protein, arsR family HYDSHO_RS02845 PF00224 Pyruvate kinase, barrel domain HYDSHO_RS02845 PF02887 Pyruvate kinase, alpha/beta domain HYDSHO_RS02845 PF00391 PEP-utilising enzyme, mobile domain HYDSHO_RS02860 PF02641 Uncharacterized ACR, COG1993 HYDSHO_RS02865 PF02537 CrcB-like protein, Camphor Resistance (CrcB) HYDSHO_RS02870 PF00361 Proton-conducting membrane transporter HYDSHO_RS02880 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit HYDSHO_RS02885 PF00361 Proton-conducting membrane transporter HYDSHO_RS02885 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus HYDSHO_RS02900 PF01225 Mur ligase family, catalytic domain HYDSHO_RS02900 PF08245 Mur ligase middle domain HYDSHO_RS02900 PF02875 Mur ligase family, glutamate ligase domain HYDSHO_RS02905 PF00535 Glycosyl transferase family 2 HYDSHO_RS02910 PF01556 DnaJ C terminal domain HYDSHO_RS02910 PF00226 DnaJ domain HYDSHO_RS02910 PF00684 DnaJ central domain HYDSHO_RS02920 PF02119 Flagellar P-ring protein HYDSHO_RS02925 PF04055 Radical SAM superfamily HYDSHO_RS02930 PF00890 FAD binding domain HYDSHO_RS02930 PF02910 Fumarate reductase flavoprotein C-term HYDSHO_RS02935 PF01933 Uncharacterised protein family UPF0052 HYDSHO_RS02940 PF01008 Initiation factor 2 subunit family HYDSHO_RS02945 PF08544 GHMP kinases C terminal HYDSHO_RS02955 PF01206 Sulfurtransferase TusA HYDSHO_RS02960 PF07992 Pyridine nucleotide-disulphide oxidoreductase HYDSHO_RS02970 PF10417 C-terminal domain of 1-Cys peroxiredoxin HYDSHO_RS02970 PF00578 AhpC/TSA family HYDSHO_RS02975 PF00437 Type II/IV secretion system protein HYDSHO_RS02985 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain HYDSHO_RS02985 PF00056 lactate/malate dehydrogenase, NAD binding domain HYDSHO_RS02990 PF00330 Aconitase family (aconitate hydratase) HYDSHO_RS02995 PF01950 Fructose-1,6-bisphosphatase HYDSHO_RS03010 PF07690 Major Facilitator Superfamily HYDSHO_RS03020 PF00483 Nucleotidyl transferase HYDSHO_RS03025 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) HYDSHO_RS03025 PF00128 Alpha amylase, catalytic domain HYDSHO_RS03025 PF02806 Alpha amylase, C-terminal all-beta domain HYDSHO_RS03030 PF00448 SRP54-type protein, GTPase domain HYDSHO_RS03030 PF02881 SRP54-type protein, helical bundle domain HYDSHO_RS03055 PF00085 Thioredoxin HYDSHO_RS03060 PF07992 Pyridine nucleotide-disulphide oxidoreductase HYDSHO_RS03065 PF07238 PilZ domain HYDSHO_RS03075 PF00575 S1 RNA binding domain HYDSHO_RS03075 PF10150 Ribonuclease E/G family HYDSHO_RS03080 PF00291 Pyridoxal-phosphate dependent enzyme HYDSHO_RS03100 PF00654 Voltage gated chloride channel HYDSHO_RS03105 PF00682 HMGL-like HYDSHO_RS03105 PF02436 Conserved carboxylase domain HYDSHO_RS03105 PF00364 Biotin-requiring enzyme HYDSHO_RS03110 PF01634 ATP phosphoribosyltransferase HYDSHO_RS03115 PF01618 MotA/TolQ/ExbB proton channel family HYDSHO_RS03120 PF00691 OmpA family HYDSHO_RS03120 PF13677 Membrane MotB of proton-channel complex MotA/MotB HYDSHO_RS03125 PF00890 FAD binding domain HYDSHO_RS03125 PF02910 Fumarate reductase flavoprotein C-term HYDSHO_RS03140 PF00579 tRNA synthetases class I (W and Y) HYDSHO_RS03140 PF01479 S4 domain HYDSHO_RS03145 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain HYDSHO_RS03145 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain HYDSHO_RS03145 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain HYDSHO_RS03150 PF01029 NusB family HYDSHO_RS03160 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase HYDSHO_RS03170 PF00850 Histone deacetylase domain HYDSHO_RS03175 PF00027 Cyclic nucleotide-binding domain HYDSHO_RS03175 PF13545 Crp-like helix-turn-helix domain HYDSHO_RS03180 PF02540 NAD synthase HYDSHO_RS03180 PF00117 Glutamine amidotransferase class-I HYDSHO_RS03180 PF00958 GMP synthase C terminal domain HYDSHO_RS03185 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ HYDSHO_RS03190 PF01068 ATP dependent DNA ligase domain HYDSHO_RS03190 PF04679 ATP dependent DNA ligase C terminal region HYDSHO_RS03190 PF13298 DNA polymerase Ligase (LigD) HYDSHO_RS03195 PF14841 FliG middle domain HYDSHO_RS03195 PF01706 FliG C-terminal domain HYDSHO_RS03195 PF14842 FliG N-terminal domain HYDSHO_RS03205 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HYDSHO_RS03205 PF02874 ATP synthase alpha/beta family, beta-barrel domain HYDSHO_RS03205 PF18269 T3SS EscN ATPase C-terminal domain HYDSHO_RS03220 PF00460 Flagella basal body rod protein HYDSHO_RS03220 PF07559 Flagellar basal body protein FlaE HYDSHO_RS03220 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HYDSHO_RS03225 PF03748 Flagellar basal body-associated protein FliL HYDSHO_RS03235 PF00813 FliP family HYDSHO_RS03240 PF01313 Bacterial export proteins, family 3 HYDSHO_RS03245 PF01311 Bacterial export proteins, family 1 HYDSHO_RS03250 PF01312 FlhB HrpN YscU SpaS Family HYDSHO_RS03255 PF04055 Radical SAM superfamily HYDSHO_RS03260 PF00075 RNase H HYDSHO_RS03295 PF00749 tRNA synthetases class I (E and Q), catalytic domain HYDSHO_RS03335 PF00270 DEAD/DEAH box helicase HYDSHO_RS03335 PF18019 HD domain HYDSHO_RS03335 PF18395 Cas3 C-terminal domain HYDSHO_RS03345 PF07282 Putative transposase DNA-binding domain HYDSHO_RS03345 PF01385 Probable transposase HYDSHO_RS03345 PF12323 Helix-turn-helix domain HYDSHO_RS03355 PF00004 ATPase family associated with various cellular activities (AAA) HYDSHO_RS03355 PF07724 AAA domain (Cdc48 subfamily) HYDSHO_RS03355 PF17871 AAA lid domain HYDSHO_RS03355 PF02861 Clp amino terminal domain, pathogenicity island component HYDSHO_RS03355 PF10431 C-terminal, D2-small domain, of ClpB protein HYDSHO_RS03360 PF01136 Peptidase family U32 HYDSHO_RS03365 PF00171 Aldehyde dehydrogenase family HYDSHO_RS03375 PF01658 Myo-inositol-1-phosphate synthase HYDSHO_RS03380 PF01121 Dephospho-CoA kinase HYDSHO_RS03385 PF03144 Elongation factor Tu domain 2 HYDSHO_RS03385 PF14492 Elongation Factor G, domain II HYDSHO_RS03385 PF00679 Elongation factor G C-terminus HYDSHO_RS03385 PF00009 Elongation factor Tu GTP binding domain HYDSHO_RS03390 PF07498 Rho termination factor, N-terminal domain HYDSHO_RS03390 PF07497 Rho termination factor, RNA-binding domain HYDSHO_RS03390 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HYDSHO_RS03395 PF10396 GTP-binding protein TrmE N-terminus HYDSHO_RS03395 PF12631 MnmE helical domain HYDSHO_RS03395 PF01926 50S ribosome-binding GTPase HYDSHO_RS03410 PF01521 Iron-sulphur cluster biosynthesis HYDSHO_RS03415 PF03099 Biotin/lipoate A/B protein ligase family HYDSHO_RS03430 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain HYDSHO_RS03430 PF01488 Shikimate / quinate 5-dehydrogenase HYDSHO_RS03435 PF04073 Aminoacyl-tRNA editing domain HYDSHO_RS03435 PF03129 Anticodon binding domain HYDSHO_RS03435 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HYDSHO_RS03450 PF00814 Glycoprotease family HYDSHO_RS03455 PF01471 Putative peptidoglycan binding domain HYDSHO_RS03455 PF17820 PDZ domain HYDSHO_RS03455 PF03572 Peptidase family S41 HYDSHO_RS03480 PF00534 Glycosyl transferases group 1 HYDSHO_RS03480 PF13439 Glycosyltransferase Family 4 HYDSHO_RS03485 PF00534 Glycosyl transferases group 1 HYDSHO_RS03485 PF13439 Glycosyltransferase Family 4 HYDSHO_RS03515 PF01618 MotA/TolQ/ExbB proton channel family HYDSHO_RS03520 PF02472 Biopolymer transport protein ExbD/TolR HYDSHO_RS03555 PF00403 Heavy-metal-associated domain HYDSHO_RS03560 PF01545 Cation efflux family HYDSHO_RS03570 PF03814 Potassium-transporting ATPase A subunit HYDSHO_RS03630 PF00437 Type II/IV secretion system protein HYDSHO_RS03645 PF00011 Hsp20/alpha crystallin family HYDSHO_RS03655 PF00881 Nitroreductase family HYDSHO_RS03665 PF03853 YjeF-related protein N-terminus HYDSHO_RS03665 PF01256 Carbohydrate kinase HYDSHO_RS03670 PF00162 Phosphoglycerate kinase HYDSHO_RS03675 PF00698 Acyl transferase domain HYDSHO_RS03680 PF13085 2Fe-2S iron-sulfur cluster binding domain HYDSHO_RS03690 PF01230 HIT domain HYDSHO_RS03695 PF01165 Ribosomal protein S21 HYDSHO_RS03700 PF01941 S-adenosylmethionine synthetase (AdoMet synthetase) HYDSHO_RS03705 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 HYDSHO_RS03710 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit HYDSHO_RS03715 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit HYDSHO_RS03715 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit HYDSHO_RS03720 PF00146 NADH dehydrogenase HYDSHO_RS03725 PF13237 4Fe-4S dicluster domain HYDSHO_RS03730 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 HYDSHO_RS03735 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L HYDSHO_RS03740 PF00361 Proton-conducting membrane transporter HYDSHO_RS03740 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus HYDSHO_RS03745 PF00361 Proton-conducting membrane transporter HYDSHO_RS03750 PF00361 Proton-conducting membrane transporter HYDSHO_RS03755 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 HYDSHO_RS03760 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit HYDSHO_RS03760 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit HYDSHO_RS03765 PF00146 NADH dehydrogenase HYDSHO_RS03770 PF13237 4Fe-4S dicluster domain HYDSHO_RS03775 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 HYDSHO_RS03780 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L HYDSHO_RS03785 PF00361 Proton-conducting membrane transporter HYDSHO_RS03785 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus HYDSHO_RS03790 PF00361 Proton-conducting membrane transporter HYDSHO_RS03795 PF00361 Proton-conducting membrane transporter HYDSHO_RS03800 PF00625 Guanylate kinase HYDSHO_RS03805 PF01192 RNA polymerase Rpb6 HYDSHO_RS03810 PF00675 Insulinase (Peptidase family M16) HYDSHO_RS03810 PF05193 Peptidase M16 inactive domain HYDSHO_RS03815 PF10996 Beta-Casp domain HYDSHO_RS03815 PF00753 Metallo-beta-lactamase superfamily HYDSHO_RS03815 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain HYDSHO_RS03845 PF02261 Aspartate decarboxylase HYDSHO_RS03850 PF00133 tRNA synthetases class I (I, L, M and V) HYDSHO_RS03850 PF08264 Anticodon-binding domain of tRNA HYDSHO_RS03860 PF02606 Tetraacyldisaccharide-1-P 4'-kinase HYDSHO_RS03870 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HYDSHO_RS03870 PF02785 Biotin carboxylase C-terminal domain HYDSHO_RS03870 PF00289 Biotin carboxylase, N-terminal domain HYDSHO_RS03875 PF14748 Pyrroline-5-carboxylate reductase dimerisation HYDSHO_RS03875 PF03807 NADP oxidoreductase coenzyme F420-dependent HYDSHO_RS03880 PF13175 AAA ATPase domain HYDSHO_RS03885 PF13533 Biotin-lipoyl like HYDSHO_RS03890 PF00873 AcrB/AcrD/AcrF family HYDSHO_RS03900 PF00501 AMP-binding enzyme HYDSHO_RS03905 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HYDSHO_RS03905 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HYDSHO_RS03905 PF01842 ACT domain HYDSHO_RS03910 PF13840 ACT domain HYDSHO_RS03910 PF00696 Amino acid kinase family HYDSHO_RS03910 PF01842 ACT domain HYDSHO_RS03915 PF00294 pfkB family carbohydrate kinase HYDSHO_RS03915 PF01467 Cytidylyltransferase-like HYDSHO_RS03935 PF00873 AcrB/AcrD/AcrF family HYDSHO_RS03945 PF07690 Major Facilitator Superfamily HYDSHO_RS03950 PF01329 Pterin 4 alpha carbinolamine dehydratase HYDSHO_RS03955 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase HYDSHO_RS03970 PF00977 Histidine biosynthesis protein HYDSHO_RS03975 PF00202 Aminotransferase class-III HYDSHO_RS03980 PF09094 Domain of unknown function (DUF1925) HYDSHO_RS03980 PF09095 Domain of unknown function (DUF1926) HYDSHO_RS03980 PF03065 Glycosyl hydrolase family 57 HYDSHO_RS03990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HYDSHO_RS03990 PF00512 His Kinase A (phospho-acceptor) domain HYDSHO_RS03990 PF16736 Single Cache-like HYDSHO_RS03990 PF00989 PAS fold HYDSHO_RS03995 PF07724 AAA domain (Cdc48 subfamily) HYDSHO_RS03995 PF10431 C-terminal, D2-small domain, of ClpB protein HYDSHO_RS04000 PF02699 Preprotein translocase subunit HYDSHO_RS04005 PF01134 Glucose inhibited division protein A HYDSHO_RS04015 PF01380 SIS domain HYDSHO_RS04020 PF04055 Radical SAM superfamily HYDSHO_RS04025 PF17827 PrmC N-terminal domain HYDSHO_RS04025 PF05175 Methyltransferase small domain HYDSHO_RS04030 PF03840 Preprotein translocase SecG subunit HYDSHO_RS04035 PF03744 6-carboxyhexanoate--CoA ligase HYDSHO_RS04040 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HYDSHO_RS04040 PF08447 PAS fold HYDSHO_RS04040 PF13426 PAS domain HYDSHO_RS04045 PF00923 Transaldolase/Fructose-6-phosphate aldolase HYDSHO_RS04050 PF01979 Amidohydrolase family HYDSHO_RS04060 PF00133 tRNA synthetases class I (I, L, M and V) HYDSHO_RS04060 PF08264 Anticodon-binding domain of tRNA HYDSHO_RS04065 PF08448 PAS fold HYDSHO_RS04065 PF00990 Diguanylate cyclase, GGDEF domain HYDSHO_RS04065 PF00563 EAL domain HYDSHO_RS04085 PF00115 Cytochrome C and Quinol oxidase polypeptide I HYDSHO_RS04090 PF13442 Cytochrome C oxidase, cbb3-type, subunit III HYDSHO_RS04090 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP HYDSHO_RS04090 PF00034 Cytochrome c HYDSHO_RS04100 PF00460 Flagella basal body rod protein HYDSHO_RS04100 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HYDSHO_RS04115 PF01039 Carboxyl transferase domain HYDSHO_RS04115 PF17848 Acetyl-coA carboxylase zinc finger domain HYDSHO_RS04120 PF02569 Pantoate-beta-alanine ligase HYDSHO_RS04125 PF02397 Bacterial sugar transferase HYDSHO_RS04130 PF01078 Magnesium chelatase, subunit ChlI HYDSHO_RS04130 PF13335 Magnesium chelatase, subunit ChlI C-terminal HYDSHO_RS04135 PF01050 Mannose-6-phosphate isomerase HYDSHO_RS04135 PF00483 Nucleotidyl transferase HYDSHO_RS04140 PF01861 Branched-chain polyamine synthase A C-terminal domain HYDSHO_RS04145 PF00271 Helicase conserved C-terminal domain HYDSHO_RS04145 PF04851 Type III restriction enzyme, res subunit HYDSHO_RS04145 PF02151 UvrB/uvrC motif HYDSHO_RS04145 PF12344 Ultra-violet resistance protein B HYDSHO_RS04145 PF17757 UvrB interaction domain HYDSHO_RS04155 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HYDSHO_RS04155 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HYDSHO_RS04195 PF03710 Glutamate-ammonia ligase adenylyltransferase HYDSHO_RS04195 PF08335 GlnD PII-uridylyltransferase HYDSHO_RS04200 PF03061 Thioesterase superfamily HYDSHO_RS04205 PF01475 Ferric uptake regulator family HYDSHO_RS04215 PF01725 Ham1 family HYDSHO_RS04225 PF07992 Pyridine nucleotide-disulphide oxidoreductase HYDSHO_RS04225 PF13192 Thioredoxin domain HYDSHO_RS04230 PF00677 Lumazine binding domain HYDSHO_RS04250 PF01938 TRAM domain HYDSHO_RS04250 PF04055 Radical SAM superfamily HYDSHO_RS04250 PF00919 Uncharacterized protein family UPF0004 HYDSHO_RS04255 PF02464 Competence-damaged protein HYDSHO_RS04255 PF18146 Damage-inducible protein CinA KH domain HYDSHO_RS04255 PF00994 Probable molybdopterin binding domain HYDSHO_RS04260 PF00905 Penicillin binding protein transpeptidase domain HYDSHO_RS04260 PF03717 Penicillin-binding Protein dimerisation domain HYDSHO_RS04270 PF01795 MraW methylase family HYDSHO_RS04275 PF00850 Histone deacetylase domain HYDSHO_RS04280 PF01138 3' exoribonuclease family, domain 1 HYDSHO_RS04280 PF03725 3' exoribonuclease family, domain 2 HYDSHO_RS04285 PF00561 alpha/beta hydrolase fold HYDSHO_RS04290 PF00166 Chaperonin 10 Kd subunit HYDSHO_RS04295 PF00118 TCP-1/cpn60 chaperonin family HYDSHO_RS04300 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase HYDSHO_RS04305 PF01966 HD domain HYDSHO_RS04305 PF13286 Phosphohydrolase-associated domain HYDSHO_RS04310 PF01502 Phosphoribosyl-AMP cyclohydrolase HYDSHO_RS04310 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase HYDSHO_RS04315 PF01521 Iron-sulphur cluster biosynthesis HYDSHO_RS04335 PF02561 Flagellar protein FliS HYDSHO_RS04345 PF03646 FlaG protein HYDSHO_RS04350 PF05866 Endodeoxyribonuclease RusA HYDSHO_RS04355 PF01588 Putative tRNA binding domain HYDSHO_RS04355 PF03147 Ferredoxin-fold anticodon binding domain HYDSHO_RS04355 PF03484 tRNA synthetase B5 domain HYDSHO_RS04355 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain HYDSHO_RS04355 PF03483 B3/4 domain HYDSHO_RS04360 PF01812 5-formyltetrahydrofolate cyclo-ligase family HYDSHO_RS04365 PF12072 Domain of unknown function (DUF3552) HYDSHO_RS04365 PF00013 KH domain HYDSHO_RS04365 PF01966 HD domain HYDSHO_RS04370 PF06969 HemN C-terminal domain HYDSHO_RS04370 PF04055 Radical SAM superfamily HYDSHO_RS04375 PF00119 ATP synthase A chain HYDSHO_RS04385 PF00137 ATP synthase subunit C HYDSHO_RS04390 PF00468 Ribosomal protein L34 HYDSHO_RS04395 PF01809 Putative membrane protein insertion efficiency factor HYDSHO_RS04400 PF02096 60Kd inner membrane protein HYDSHO_RS04405 PF13145 PPIC-type PPIASE domain HYDSHO_RS04410 PF01959 3-dehydroquinate synthase II HYDSHO_RS04415 PF00834 Ribulose-phosphate 3 epimerase family HYDSHO_RS04420 PF00155 Aminotransferase class I and II HYDSHO_RS04425 PF17284 Spermidine synthase tetramerisation domain HYDSHO_RS04435 PF10576 Iron-sulfur binding domain of endonuclease III HYDSHO_RS04435 PF00633 Helix-hairpin-helix motif HYDSHO_RS04435 PF00730 HhH-GPD superfamily base excision DNA repair protein HYDSHO_RS04440 PF00474 Sodium:solute symporter family HYDSHO_RS04445 PF00815 Histidinol dehydrogenase HYDSHO_RS04455 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain HYDSHO_RS04455 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain HYDSHO_RS04460 PF12826 Helix-hairpin-helix motif HYDSHO_RS04460 PF03119 NAD-dependent DNA ligase C4 zinc finger domain HYDSHO_RS04460 PF03120 NAD-dependent DNA ligase OB-fold domain HYDSHO_RS04460 PF00533 BRCA1 C Terminus (BRCT) domain HYDSHO_RS04460 PF01653 NAD-dependent DNA ligase adenylation domain HYDSHO_RS04475 PF02754 Cysteine-rich domain HYDSHO_RS04475 PF13183 4Fe-4S dicluster domain HYDSHO_RS04480 PF02915 Rubrerythrin HYDSHO_RS04495 PF08334 Type II secretion system (T2SS), protein G HYDSHO_RS04495 PF07963 Prokaryotic N-terminal methylation motif HYDSHO_RS04505 PF07963 Prokaryotic N-terminal methylation motif HYDSHO_RS04515 PF11741 AMIN domain HYDSHO_RS04515 PF01520 N-acetylmuramoyl-L-alanine amidase HYDSHO_RS04525 PF00437 Type II/IV secretion system protein HYDSHO_RS04545 PF00348 Polyprenyl synthetase HYDSHO_RS04550 PF00571 CBS domain HYDSHO_RS04550 PF03471 Transporter associated domain HYDSHO_RS04560 PF13247 4Fe-4S dicluster domain HYDSHO_RS04570 PF00384 Molybdopterin oxidoreductase HYDSHO_RS04570 PF01568 Molydopterin dinucleotide binding domain HYDSHO_RS04570 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HYDSHO_RS04575 PF01522 Polysaccharide deacetylase HYDSHO_RS04580 PF01925 Sulfite exporter TauE/SafE HYDSHO_RS04605 PF00549 CoA-ligase HYDSHO_RS04605 PF02629 CoA binding domain HYDSHO_RS04610 PF00549 CoA-ligase HYDSHO_RS04610 PF08442 ATP-grasp domain HYDSHO_RS04615 PF00313 'Cold-shock' DNA-binding domain HYDSHO_RS04620 PF01509 TruB family pseudouridylate synthase (N terminal domain) HYDSHO_RS04620 PF16198 tRNA pseudouridylate synthase B C-terminal domain HYDSHO_RS04620 PF09157 Pseudouridine synthase II TruB, C-terminal HYDSHO_RS04625 PF04545 Sigma-70, region 4 HYDSHO_RS04625 PF04539 Sigma-70 region 3 HYDSHO_RS04625 PF00140 Sigma-70 factor, region 1.2 HYDSHO_RS04625 PF04542 Sigma-70 region 2 HYDSHO_RS04625 PF03979 Sigma-70 factor, region 1.1 HYDSHO_RS04630 PF13180 PDZ domain HYDSHO_RS04640 PF03099 Biotin/lipoate A/B protein ligase family HYDSHO_RS04645 PF07977 FabA-like domain HYDSHO_RS04650 PF01875 Memo-like protein HYDSHO_RS04660 PF00543 Nitrogen regulatory protein P-II HYDSHO_RS04665 PF00909 Ammonium Transporter Family HYDSHO_RS04675 PF03459 TOBE domain HYDSHO_RS04675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HYDSHO_RS04685 PF00528 Binding-protein-dependent transport system inner membrane component HYDSHO_RS04690 PF00005 ABC transporter HYDSHO_RS04690 PF03459 TOBE domain HYDSHO_RS04725 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain HYDSHO_RS04725 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain HYDSHO_RS04735 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain HYDSHO_RS04735 PF00117 Glutamine amidotransferase class-I HYDSHO_RS04750 PF01195 Peptidyl-tRNA hydrolase HYDSHO_RS04755 PF01386 Ribosomal L25p family HYDSHO_RS04755 PF14693 Ribosomal protein TL5, C-terminal domain HYDSHO_RS04760 PF02527 rRNA small subunit methyltransferase G HYDSHO_RS04765 PF09820 Predicted AAA-ATPase HYDSHO_RS04765 PF08011 PD-(D/E)XK nuclease superfamily HYDSHO_RS04770 PF08239 Bacterial SH3 domain HYDSHO_RS04770 PF00877 NlpC/P60 family HYDSHO_RS04770 PF01476 LysM domain HYDSHO_RS04790 PF18073 Rubredoxin metal binding domain HYDSHO_RS04795 PF02698 DUF218 domain HYDSHO_RS04805 PF01618 MotA/TolQ/ExbB proton channel family HYDSHO_RS04815 PF00300 Histidine phosphatase superfamily (branch 1) HYDSHO_RS04820 PF00266 Aminotransferase class-V HYDSHO_RS04825 PF00334 Nucleoside diphosphate kinase HYDSHO_RS04835 PF01312 FlhB HrpN YscU SpaS Family HYDSHO_RS04845 PF04166 Pyridoxal phosphate biosynthetic protein PdxA HYDSHO_RS04860 PF13439 Glycosyltransferase Family 4 HYDSHO_RS04860 PF00534 Glycosyl transferases group 1 HYDSHO_RS04865 PF18267 Rubredoxin NAD+ reductase C-terminal domain HYDSHO_RS04865 PF07992 Pyridine nucleotide-disulphide oxidoreductase HYDSHO_RS04865 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain HYDSHO_RS04865 PF04324 BFD-like [2Fe-2S] binding domain HYDSHO_RS04870 PF01197 Ribosomal protein L31 HYDSHO_RS04875 PF00472 RF-1 domain HYDSHO_RS04875 PF03462 PCRF domain HYDSHO_RS04885 PF02656 Domain of unknown function (DUF202) HYDSHO_RS04890 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HYDSHO_RS04895 PF04539 Sigma-70 region 3 HYDSHO_RS04895 PF04545 Sigma-70, region 4 HYDSHO_RS04895 PF04542 Sigma-70 region 2 HYDSHO_RS04900 PF07690 Major Facilitator Superfamily HYDSHO_RS04920 PF13380 CoA binding domain HYDSHO_RS04925 PF01043 SecA preprotein cross-linking domain HYDSHO_RS04925 PF07516 SecA Wing and Scaffold domain HYDSHO_RS04925 PF07517 SecA DEAD-like domain HYDSHO_RS04930 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HYDSHO_RS04930 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HYDSHO_RS04930 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HYDSHO_RS04930 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HYDSHO_RS04945 PF08745 PINc domain ribonuclease HYDSHO_RS04960 PF01336 OB-fold nucleic acid binding domain HYDSHO_RS04960 PF00152 tRNA synthetases class II (D, K and N) HYDSHO_RS04965 PF04055 Radical SAM superfamily HYDSHO_RS04965 PF06968 Biotin and Thiamin Synthesis associated domain HYDSHO_RS04970 PF14437 MafB19-like deaminase HYDSHO_RS04975 PF01894 Uncharacterised protein family UPF0047 HYDSHO_RS04980 PF02163 Peptidase family M50 HYDSHO_RS04980 PF17820 PDZ domain HYDSHO_RS04985 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HYDSHO_RS04985 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HYDSHO_RS04990 PF00005 ABC transporter HYDSHO_RS04990 PF00664 ABC transporter transmembrane region HYDSHO_RS05000 PF01118 Semialdehyde dehydrogenase, NAD binding domain HYDSHO_RS05000 PF02774 Semialdehyde dehydrogenase, dimerisation domain HYDSHO_RS05005 PF00380 Ribosomal protein S9/S16 HYDSHO_RS05010 PF00572 Ribosomal protein L13 HYDSHO_RS05020 PF00842 Alanine racemase, C-terminal domain HYDSHO_RS05020 PF01168 Alanine racemase, N-terminal domain HYDSHO_RS05035 PF00989 PAS fold HYDSHO_RS05035 PF00512 His Kinase A (phospho-acceptor) domain HYDSHO_RS05035 PF18698 Histidine kinase sensor domain HYDSHO_RS05035 PF00672 HAMP domain HYDSHO_RS05035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HYDSHO_RS05040 PF11987 Translation-initiation factor 2 HYDSHO_RS05040 PF03144 Elongation factor Tu domain 2 HYDSHO_RS05040 PF04760 Translation initiation factor IF-2, N-terminal region HYDSHO_RS05040 PF00009 Elongation factor Tu GTP binding domain HYDSHO_RS05050 PF00306 ATP synthase alpha/beta chain, C terminal domain HYDSHO_RS05050 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HYDSHO_RS05050 PF02874 ATP synthase alpha/beta family, beta-barrel domain HYDSHO_RS05055 PF00213 ATP synthase delta (OSCP) subunit HYDSHO_RS05070 PF01668 SmpB protein HYDSHO_RS05075 PF00575 S1 RNA binding domain HYDSHO_RS05075 PF00773 RNB domain HYDSHO_RS05075 PF08206 Ribonuclease B OB domain HYDSHO_RS05075 PF17876 Cold shock domain HYDSHO_RS05090 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HYDSHO_RS05090 PF02874 ATP synthase alpha/beta family, beta-barrel domain HYDSHO_RS05105 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain HYDSHO_RS05105 PF02222 ATP-grasp domain HYDSHO_RS05110 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 HYDSHO_RS05110 PF00132 Bacterial transferase hexapeptide (six repeats) HYDSHO_RS05120 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit HYDSHO_RS05125 PF01131 DNA topoisomerase HYDSHO_RS05125 PF01751 Toprim domain HYDSHO_RS05140 PF01523 Putative modulator of DNA gyrase HYDSHO_RS05155 PF01464 Transglycosylase SLT domain HYDSHO_RS05165 PF00582 Universal stress protein family HYDSHO_RS05170 PF00459 Inositol monophosphatase family HYDSHO_RS05185 PF01202 Shikimate kinase HYDSHO_RS05205 PF01409 tRNA synthetases class II core domain (F) HYDSHO_RS05205 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain HYDSHO_RS05210 PF00453 Ribosomal protein L20 HYDSHO_RS05215 PF01351 Ribonuclease HII HYDSHO_RS05220 PF01245 Ribosomal protein L19 HYDSHO_RS05230 PF02401 LytB protein HYDSHO_RS05235 PF01578 Cytochrome C assembly protein HYDSHO_RS05240 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain HYDSHO_RS05240 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain HYDSHO_RS05245 PF00216 Bacterial DNA-binding protein HYDSHO_RS05255 PF00398 Ribosomal RNA adenine dimethylase HYDSHO_RS05270 PF00133 tRNA synthetases class I (I, L, M and V) HYDSHO_RS05270 PF13603 Leucyl-tRNA synthetase, Domain 2 HYDSHO_RS05285 PF12800 4Fe-4S binding domain HYDSHO_RS05295 PF02780 Transketolase, C-terminal domain HYDSHO_RS05295 PF13292 1-deoxy-D-xylulose-5-phosphate synthase HYDSHO_RS05295 PF02779 Transketolase, pyrimidine binding domain HYDSHO_RS05305 PF00069 Protein kinase domain HYDSHO_RS05305 PF03793 PASTA domain HYDSHO_RS05310 PF01416 tRNA pseudouridine synthase HYDSHO_RS05315 PF11897 Protein of unknown function (DUF3417) HYDSHO_RS05315 PF00343 Carbohydrate phosphorylase HYDSHO_RS05335 PF07992 Pyridine nucleotide-disulphide oxidoreductase HYDSHO_RS05335 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster HYDSHO_RS05355 PF01597 Glycine cleavage H-protein HYDSHO_RS05370 PF01597 Glycine cleavage H-protein HYDSHO_RS05390 PF07992 Pyridine nucleotide-disulphide oxidoreductase HYDSHO_RS05390 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HYDSHO_RS05410 PF13686 DsrE/DsrF/DrsH-like family HYDSHO_RS05415 PF01206 Sulfurtransferase TusA HYDSHO_RS05425 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain HYDSHO_RS05430 PF02767 DNA polymerase III beta subunit, central domain HYDSHO_RS05430 PF00712 DNA polymerase III beta subunit, N-terminal domain HYDSHO_RS05430 PF02768 DNA polymerase III beta subunit, C-terminal domain HYDSHO_RS05440 PF00149 Calcineurin-like phosphoesterase HYDSHO_RS05445 PF16200 C-terminal region of band_7 HYDSHO_RS05445 PF01145 SPFH domain / Band 7 family HYDSHO_RS05455 PF00731 AIR carboxylase HYDSHO_RS05460 PF00155 Aminotransferase class I and II HYDSHO_RS05465 PF01638 HxlR-like helix-turn-helix HYDSHO_RS05485 PF00709 Adenylosuccinate synthetase HYDSHO_RS05495 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) HYDSHO_RS05505 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus HYDSHO_RS05505 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus HYDSHO_RS05505 PF00361 Proton-conducting membrane transporter HYDSHO_RS05510 PF01259 SAICAR synthetase HYDSHO_RS05520 PF01649 Ribosomal protein S20 HYDSHO_RS05555 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain HYDSHO_RS05555 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HYDSHO_RS05560 PF00902 Sec-independent protein translocase protein (TatC) HYDSHO_RS05565 PF02416 mttA/Hcf106 family HYDSHO_RS05570 PF01478 Type IV leader peptidase family HYDSHO_RS05570 PF06750 Bacterial Peptidase A24 N-terminal domain HYDSHO_RS05575 PF02355 Protein export membrane protein HYDSHO_RS05575 PF07549 SecD/SecF GG Motif HYDSHO_RS05580 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein HYDSHO_RS05580 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus HYDSHO_RS05600 PF00768 D-alanyl-D-alanine carboxypeptidase HYDSHO_RS05605 PF01790 Prolipoprotein diacylglyceryl transferase HYDSHO_RS05610 PF01406 tRNA synthetases class I (C) catalytic domain HYDSHO_RS05610 PF09190 DALR domain HYDSHO_RS05625 PF01098 Cell cycle protein HYDSHO_RS05635 PF01964 Radical SAM ThiC family HYDSHO_RS05640 PF03755 YicC-like family, N-terminal region HYDSHO_RS05640 PF08340 Domain of unknown function (DUF1732) HYDSHO_RS05665 PF00534 Glycosyl transferases group 1 HYDSHO_RS05665 PF00862 Sucrose synthase HYDSHO_RS05675 PF00583 Acetyltransferase (GNAT) family HYDSHO_RS05680 PF04343 Protein of unknown function, DUF488 HYDSHO_RS05705 PF10502 Signal peptidase, peptidase S26 HYDSHO_RS05710 PF00994 Probable molybdopterin binding domain HYDSHO_RS05710 PF03454 MoeA C-terminal region (domain IV) HYDSHO_RS05710 PF03453 MoeA N-terminal region (domain I and II) HYDSHO_RS05720 PF05690 Thiazole biosynthesis protein ThiG HYDSHO_RS05725 PF01593 Flavin containing amine oxidoreductase HYDSHO_RS05730 PF01209 ubiE/COQ5 methyltransferase family HYDSHO_RS05750 PF13525 Outer membrane lipoprotein HYDSHO_RS05765 PF00072 Response regulator receiver domain HYDSHO_RS05765 PF00486 Transcriptional regulatory protein, C terminal HYDSHO_RS05770 PF01713 Smr domain HYDSHO_RS05770 PF00488 MutS domain V HYDSHO_RS05775 PF00924 Mechanosensitive ion channel HYDSHO_RS05780 PF01370 NAD dependent epimerase/dehydratase family HYDSHO_RS05785 PF07992 Pyridine nucleotide-disulphide oxidoreductase HYDSHO_RS05795 PF01590 GAF domain HYDSHO_RS05795 PF00158 Sigma-54 interaction domain HYDSHO_RS05795 PF02954 Bacterial regulatory protein, Fis family HYDSHO_RS05800 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus HYDSHO_RS05800 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus HYDSHO_RS05805 PF00877 NlpC/P60 family HYDSHO_RS05805 PF01476 LysM domain HYDSHO_RS05815 PF02542 YgbB family HYDSHO_RS05820 PF01734 Patatin-like phospholipase HYDSHO_RS05825 PF00034 Cytochrome c HYDSHO_RS05830 PF13180 PDZ domain HYDSHO_RS05835 PF01678 Diaminopimelate epimerase HYDSHO_RS05845 PF13183 4Fe-4S dicluster domain HYDSHO_RS05845 PF02754 Cysteine-rich domain HYDSHO_RS05850 PF02621 Menaquinone biosynthesis HYDSHO_RS05860 PF04608 Phosphatidylglycerophosphatase A HYDSHO_RS05865 PF00990 Diguanylate cyclase, GGDEF domain HYDSHO_RS05865 PF17158 Membrane-associated sensor, integral membrane domain HYDSHO_RS05875 PF02581 Thiamine monophosphate synthase HYDSHO_RS05890 PF18019 HD domain HYDSHO_RS05900 PF01867 CRISPR associated protein Cas1 HYDSHO_RS05905 PF09827 CRISPR associated protein Cas2 HYDSHO_RS05920 PF17820 PDZ domain HYDSHO_RS05920 PF13180 PDZ domain HYDSHO_RS05935 PF14489 QueF-like protein HYDSHO_RS05945 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HYDSHO_RS05950 PF08502 LeuA allosteric (dimerisation) domain HYDSHO_RS05950 PF00682 HMGL-like HYDSHO_RS05955 PF08501 Shikimate dehydrogenase substrate binding domain HYDSHO_RS05955 PF18317 Shikimate 5'-dehydrogenase C-terminal domain HYDSHO_RS05955 PF01488 Shikimate / quinate 5-dehydrogenase HYDSHO_RS05960 PF00953 Glycosyl transferase family 4 HYDSHO_RS05965 PF09936 SAM-dependent RNA methyltransferase HYDSHO_RS05970 PF02660 Glycerol-3-phosphate acyltransferase HYDSHO_RS05975 PF13091 PLD-like domain HYDSHO_RS05980 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain HYDSHO_RS05980 PF02844 Phosphoribosylglycinamide synthetase, N domain HYDSHO_RS05980 PF02843 Phosphoribosylglycinamide synthetase, C domain HYDSHO_RS05990 PF00890 FAD binding domain HYDSHO_RS06000 PF17760 UvrA interaction domain HYDSHO_RS06000 PF17755 UvrA DNA-binding domain HYDSHO_RS06000 PF00005 ABC transporter HYDSHO_RS06010 PF01025 GrpE HYDSHO_RS06015 PF01343 Peptidase family S49 HYDSHO_RS06020 PF00218 Indole-3-glycerol phosphate synthase HYDSHO_RS06025 PF01738 Dienelactone hydrolase family HYDSHO_RS06030 PF01208 Uroporphyrinogen decarboxylase (URO-D) HYDSHO_RS06035 PF00563 EAL domain HYDSHO_RS06035 PF08668 HDOD domain HYDSHO_RS06040 PF10369 Small subunit of acetolactate synthase HYDSHO_RS06040 PF01842 ACT domain HYDSHO_RS06045 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HYDSHO_RS06045 PF00205 Thiamine pyrophosphate enzyme, central domain HYDSHO_RS06045 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HYDSHO_RS06050 PF08502 LeuA allosteric (dimerisation) domain HYDSHO_RS06050 PF00682 HMGL-like HYDSHO_RS06055 PF01321 Creatinase/Prolidase N-terminal domain HYDSHO_RS06055 PF00557 Metallopeptidase family M24 HYDSHO_RS06060 PF04963 Sigma-54 factor, core binding domain HYDSHO_RS06060 PF00309 Sigma-54 factor, Activator interacting domain (AID) HYDSHO_RS06060 PF04552 Sigma-54, DNA binding domain HYDSHO_RS06065 PF04898 Glutamate synthase central domain HYDSHO_RS06065 PF00310 Glutamine amidotransferases class-II HYDSHO_RS06065 PF01645 Conserved region in glutamate synthase HYDSHO_RS06065 PF01493 GXGXG motif HYDSHO_RS06085 PF00027 Cyclic nucleotide-binding domain HYDSHO_RS06085 PF13545 Crp-like helix-turn-helix domain HYDSHO_RS06090 PF00133 tRNA synthetases class I (I, L, M and V) HYDSHO_RS06090 PF10458 Valyl tRNA synthetase tRNA binding arm HYDSHO_RS06090 PF08264 Anticodon-binding domain of tRNA HYDSHO_RS06100 PF01027 Inhibitor of apoptosis-promoting Bax1 HYDSHO_RS06105 PF02005 N2,N2-dimethylguanosine tRNA methyltransferase HYDSHO_RS06110 PF01522 Polysaccharide deacetylase HYDSHO_RS06115 PF00268 Ribonucleotide reductase, small chain HYDSHO_RS06125 PF04551 GcpE protein HYDSHO_RS06130 PF17209 Hfq protein HYDSHO_RS06135 PF13167 GTP-binding GTPase N-terminal HYDSHO_RS06135 PF01926 50S ribosome-binding GTPase HYDSHO_RS06135 PF16360 GTP-binding GTPase Middle Region HYDSHO_RS06145 PF00248 Aldo/keto reductase family HYDSHO_RS06150 PF00482 Type II secretion system (T2SS), protein F HYDSHO_RS06155 PF01790 Prolipoprotein diacylglyceryl transferase HYDSHO_RS06165 PF03900 Porphobilinogen deaminase, C-terminal domain HYDSHO_RS06165 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain HYDSHO_RS06175 PF01026 TatD related DNase HYDSHO_RS06180 PF07992 Pyridine nucleotide-disulphide oxidoreductase HYDSHO_RS06180 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HYDSHO_RS06195 PF00348 Polyprenyl synthetase HYDSHO_RS06200 PF01180 Dihydroorotate dehydrogenase HYDSHO_RS06205 PF01934 Protein of unknown function DUF86 HYDSHO_RS06215 PF01541 GIY-YIG catalytic domain HYDSHO_RS06215 PF02151 UvrB/uvrC motif HYDSHO_RS06215 PF08459 UvrC Helix-hairpin-helix N-terminal HYDSHO_RS06225 PF00486 Transcriptional regulatory protein, C terminal HYDSHO_RS06225 PF00072 Response regulator receiver domain HYDSHO_RS06230 PF00290 Tryptophan synthase alpha chain HYDSHO_RS06235 PF01765 Ribosome recycling factor HYDSHO_RS06240 PF17209 Hfq protein HYDSHO_RS06245 PF01255 Putative undecaprenyl diphosphate synthase HYDSHO_RS06255 PF00113 Enolase, C-terminal TIM barrel domain HYDSHO_RS06255 PF03952 Enolase, N-terminal domain HYDSHO_RS06270 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain HYDSHO_RS06270 PF00586 AIR synthase related protein, N-terminal domain HYDSHO_RS06270 PF02769 AIR synthase related protein, C-terminal domain HYDSHO_RS06275 PF01252 Signal peptidase (SPase) II HYDSHO_RS06280 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase HYDSHO_RS06285 PF00551 Formyl transferase HYDSHO_RS06290 PF00180 Isocitrate/isopropylmalate dehydrogenase HYDSHO_RS06300 PF00085 Thioredoxin HYDSHO_RS06305 PF00270 DEAD/DEAH box helicase HYDSHO_RS06305 PF17191 RecG wedge domain HYDSHO_RS06305 PF00271 Helicase conserved C-terminal domain HYDSHO_RS06310 PF04357 TamB, inner membrane protein subunit of TAM complex HYDSHO_RS06315 PF00893 Small Multidrug Resistance protein HYDSHO_RS06320 PF00549 CoA-ligase HYDSHO_RS06320 PF02629 CoA binding domain HYDSHO_RS06325 PF08442 ATP-grasp domain HYDSHO_RS06325 PF00549 CoA-ligase HYDSHO_RS06330 PF00072 Response regulator receiver domain HYDSHO_RS06330 PF00486 Transcriptional regulatory protein, C terminal HYDSHO_RS06335 PF01782 RimM N-terminal domain HYDSHO_RS06335 PF05239 PRC-barrel domain HYDSHO_RS06340 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase HYDSHO_RS06345 PF00700 Bacterial flagellin C-terminal helical region HYDSHO_RS06345 PF00669 Bacterial flagellin N-terminal helical region HYDSHO_RS06350 PF01687 Riboflavin kinase HYDSHO_RS06350 PF06574 FAD synthetase HYDSHO_RS06355 PF00696 Amino acid kinase family HYDSHO_RS06360 PF00889 Elongation factor TS HYDSHO_RS06365 PF00318 Ribosomal protein S2 HYDSHO_RS06385 PF00534 Glycosyl transferases group 1 HYDSHO_RS06385 PF13439 Glycosyltransferase Family 4 HYDSHO_RS06390 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain HYDSHO_RS06390 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase HYDSHO_RS06395 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain HYDSHO_RS06395 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain HYDSHO_RS06400 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase HYDSHO_RS06425 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase HYDSHO_RS06435 PF01242 6-pyruvoyl tetrahydropterin synthase HYDSHO_RS06470 PF01177 Asp/Glu/Hydantoin racemase HYDSHO_RS06475 PF01381 Helix-turn-helix HYDSHO_RS06495 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit HYDSHO_RS06500 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit HYDSHO_RS06500 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit HYDSHO_RS06505 PF00361 Proton-conducting membrane transporter HYDSHO_RS06505 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus HYDSHO_RS06515 PF00146 NADH dehydrogenase HYDSHO_RS06520 PF00361 Proton-conducting membrane transporter HYDSHO_RS06525 PF00317 Ribonucleotide reductase, all-alpha domain HYDSHO_RS06525 PF02867 Ribonucleotide reductase, barrel domain HYDSHO_RS06525 PF03477 ATP cone domain HYDSHO_RS06530 PF00535 Glycosyl transferase family 2 HYDSHO_RS06535 PF00227 Proteasome subunit HYDSHO_RS06540 PF02779 Transketolase, pyrimidine binding domain HYDSHO_RS06540 PF00456 Transketolase, thiamine diphosphate binding domain HYDSHO_RS06540 PF02780 Transketolase, C-terminal domain HYDSHO_RS06565 PF09820 Predicted AAA-ATPase HYDSHO_RS06565 PF08011 PD-(D/E)XK nuclease superfamily HYDSHO_RS06580 PF00881 Nitroreductase family HYDSHO_RS06585 PF00072 Response regulator receiver domain HYDSHO_RS06585 PF00990 Diguanylate cyclase, GGDEF domain HYDSHO_RS06600 PF14718 Soluble lytic murein transglycosylase L domain HYDSHO_RS06600 PF01464 Transglycosylase SLT domain HYDSHO_RS06620 PF02033 Ribosome-binding factor A HYDSHO_RS06625 PF00158 Sigma-54 interaction domain HYDSHO_RS06625 PF00072 Response regulator receiver domain HYDSHO_RS06625 PF02954 Bacterial regulatory protein, Fis family HYDSHO_RS06635 PF12169 DNA polymerase III subunits gamma and tau domain III HYDSHO_RS06645 PF02272 DHHA1 domain HYDSHO_RS06645 PF01368 DHH family HYDSHO_RS06645 PF17768 RecJ OB domain HYDSHO_RS06645 PF10141 Single-strand DNA-specific exonuclease, C terminal domain HYDSHO_RS06650 PF09988 Uncharacterized metal-binding protein (DUF2227) HYDSHO_RS06690 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase HYDSHO_RS06690 PF00925 GTP cyclohydrolase II HYDSHO_RS06700 PF00795 Carbon-nitrogen hydrolase HYDSHO_RS06705 PF10609 NUBPL iron-transfer P-loop NTPase HYDSHO_RS06710 PF00266 Aminotransferase class-V HYDSHO_RS06715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HYDSHO_RS06715 PF03466 LysR substrate binding domain HYDSHO_RS06720 PF13419 Haloacid dehalogenase-like hydrolase HYDSHO_RS06725 PF00684 DnaJ central domain HYDSHO_RS06725 PF01556 DnaJ C terminal domain HYDSHO_RS06725 PF00226 DnaJ domain HYDSHO_RS06735 PF00005 ABC transporter HYDSHO_RS06750 PF03776 Septum formation topological specificity factor MinE HYDSHO_RS06755 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain HYDSHO_RS06760 PF03775 Septum formation inhibitor MinC, C-terminal domain HYDSHO_RS06765 PF01209 ubiE/COQ5 methyltransferase family HYDSHO_RS06770 PF00121 Triosephosphate isomerase HYDSHO_RS06775 PF00072 Response regulator receiver domain HYDSHO_RS06775 PF00990 Diguanylate cyclase, GGDEF domain HYDSHO_RS06780 PF01523 Putative modulator of DNA gyrase HYDSHO_RS06790 PF13291 ACT domain HYDSHO_RS06790 PF04607 Region found in RelA / SpoT proteins HYDSHO_RS06790 PF02824 TGS domain HYDSHO_RS06795 PF01225 Mur ligase family, catalytic domain HYDSHO_RS06795 PF02875 Mur ligase family, glutamate ligase domain HYDSHO_RS06795 PF08245 Mur ligase middle domain HYDSHO_RS06800 PF01597 Glycine cleavage H-protein HYDSHO_RS06815 PF01063 Amino-transferase class IV HYDSHO_RS06825 PF13419 Haloacid dehalogenase-like hydrolase HYDSHO_RS06830 PF01170 Putative RNA methylase family UPF0020 HYDSHO_RS06830 PF02926 THUMP domain HYDSHO_RS06830 PF10672 S-adenosylmethionine-dependent methyltransferase HYDSHO_RS06835 PF13580 SIS domain HYDSHO_RS06840 PF03772 Competence protein HYDSHO_RS06845 PF00202 Aminotransferase class-III HYDSHO_RS06850 PF00154 recA bacterial DNA recombination protein HYDSHO_RS06855 PF02686 Glu-tRNAGln amidotransferase C subunit HYDSHO_RS06860 PF00689 Cation transporting ATPase, C-terminus HYDSHO_RS06860 PF00690 Cation transporter/ATPase, N-terminus HYDSHO_RS06865 PF02107 Flagellar L-ring protein HYDSHO_RS06870 PF02785 Biotin carboxylase C-terminal domain HYDSHO_RS06870 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HYDSHO_RS06870 PF00289 Biotin carboxylase, N-terminal domain HYDSHO_RS06875 PF02594 Uncharacterised ACR, YggU family COG1872 HYDSHO_RS06880 PF00285 Citrate synthase, C-terminal domain HYDSHO_RS06885 PF00899 ThiF family HYDSHO_RS06895 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family HYDSHO_RS06900 PF00117 Glutamine amidotransferase class-I HYDSHO_RS06910 PF00535 Glycosyl transferase family 2 HYDSHO_RS06925 PF00873 AcrB/AcrD/AcrF family HYDSHO_RS06930 PF13533 Biotin-lipoyl like HYDSHO_RS06940 PF01513 ATP-NAD kinase HYDSHO_RS06945 PF04055 Radical SAM superfamily HYDSHO_RS06950 PF00117 Glutamine amidotransferase class-I HYDSHO_RS06965 PF03824 High-affinity nickel-transport protein HYDSHO_RS06970 PF08753 NikR C terminal nickel binding domain HYDSHO_RS06970 PF01402 Ribbon-helix-helix protein, copG family HYDSHO_RS06975 PF00440 Bacterial regulatory proteins, tetR family HYDSHO_RS06980 PF00012 Hsp70 protein HYDSHO_RS07000 PF00563 EAL domain HYDSHO_RS07000 PF00990 Diguanylate cyclase, GGDEF domain HYDSHO_RS07000 PF08447 PAS fold HYDSHO_RS07000 PF08448 PAS fold HYDSHO_RS07005 PF00578 AhpC/TSA family HYDSHO_RS07010 PF04055 Radical SAM superfamily HYDSHO_RS07020 PF00795 Carbon-nitrogen hydrolase HYDSHO_RS07020 PF02540 NAD synthase HYDSHO_RS07025 PF00990 Diguanylate cyclase, GGDEF domain HYDSHO_RS07025 PF17158 Membrane-associated sensor, integral membrane domain HYDSHO_RS07030 PF00578 AhpC/TSA family HYDSHO_RS07035 PF02491 SHS2 domain inserted in FTSA HYDSHO_RS07040 PF01842 ACT domain HYDSHO_RS07040 PF00742 Homoserine dehydrogenase HYDSHO_RS07040 PF03447 Homoserine dehydrogenase, NAD binding domain HYDSHO_RS07045 PF00288 GHMP kinases N terminal domain HYDSHO_RS07045 PF08544 GHMP kinases C terminal HYDSHO_RS07050 PF02562 PhoH-like protein HYDSHO_RS07055 PF02130 Uncharacterized protein family UPF0054 HYDSHO_RS07060 PF01545 Cation efflux family HYDSHO_RS07060 PF16916 Dimerisation domain of Zinc Transporter HYDSHO_RS07065 PF04055 Radical SAM superfamily HYDSHO_RS07065 PF16199 Radical_SAM C-terminal domain HYDSHO_RS07085 PF00480 ROK family HYDSHO_RS07100 PF00271 Helicase conserved C-terminal domain HYDSHO_RS07100 PF00176 SNF2 family N-terminal domain HYDSHO_RS07105 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit HYDSHO_RS07105 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal HYDSHO_RS07120 PF07664 Ferrous iron transport protein B C terminus HYDSHO_RS07120 PF17910 FeoB cytosolic helical domain HYDSHO_RS07120 PF02421 Ferrous iron transport protein B HYDSHO_RS07120 PF07670 Nucleoside recognition HYDSHO_RS07130 PF01757 Acyltransferase family HYDSHO_RS07140 PF01126 Heme oxygenase HYDSHO_RS07145 PF00180 Isocitrate/isopropylmalate dehydrogenase HYDSHO_RS07155 PF00289 Biotin carboxylase, N-terminal domain HYDSHO_RS07155 PF02785 Biotin carboxylase C-terminal domain HYDSHO_RS07155 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HYDSHO_RS07160 PF00682 HMGL-like HYDSHO_RS07160 PF02436 Conserved carboxylase domain HYDSHO_RS07160 PF00364 Biotin-requiring enzyme HYDSHO_RS07165 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II HYDSHO_RS07165 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase HYDSHO_RS07165 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg HYDSHO_RS07170 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HYDSHO_RS07185 PF02811 PHP domain HYDSHO_RS07185 PF14716 Helix-hairpin-helix domain HYDSHO_RS07185 PF14791 DNA polymerase beta thumb HYDSHO_RS07190 PF01368 DHH family HYDSHO_RS07190 PF02272 DHHA1 domain HYDSHO_RS07190 PF01743 Poly A polymerase head domain HYDSHO_RS07190 PF00571 CBS domain HYDSHO_RS07205 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HYDSHO_RS07210 PF00990 Diguanylate cyclase, GGDEF domain HYDSHO_RS07225 PF10397 Adenylosuccinate lyase C-terminus HYDSHO_RS07225 PF00206 Lyase HYDSHO_RS07230 PF01066 CDP-alcohol phosphatidyltransferase HYDSHO_RS07235 PF07650 KH domain HYDSHO_RS07235 PF01926 50S ribosome-binding GTPase HYDSHO_RS07245 PF01814 Hemerythrin HHE cation binding domain HYDSHO_RS07250 PF07992 Pyridine nucleotide-disulphide oxidoreductase HYDSHO_RS07255 PF01258 Prokaryotic dksA/traR C4-type zinc finger HYDSHO_RS07260 PF01425 Amidase HYDSHO_RS07270 PF00580 UvrD/REP helicase N-terminal domain HYDSHO_RS07270 PF13361 UvrD-like helicase C-terminal domain HYDSHO_RS07275 PF07885 Ion channel HYDSHO_RS07275 PF02254 TrkA-N domain HYDSHO_RS07280 PF16363 GDP-mannose 4,6 dehydratase HYDSHO_RS07295 PF07690 Major Facilitator Superfamily HYDSHO_RS07305 PF13439 Glycosyltransferase Family 4 HYDSHO_RS07305 PF00534 Glycosyl transferases group 1 HYDSHO_RS07315 PF13277 YmdB-like protein HYDSHO_RS07330 PF01040 UbiA prenyltransferase family HYDSHO_RS07340 PF00117 Glutamine amidotransferase class-I HYDSHO_RS07350 PF00005 ABC transporter HYDSHO_RS07370 PF13247 4Fe-4S dicluster domain HYDSHO_RS07370 PF12800 4Fe-4S binding domain HYDSHO_RS07375 PF01225 Mur ligase family, catalytic domain HYDSHO_RS07375 PF02875 Mur ligase family, glutamate ligase domain HYDSHO_RS07375 PF08245 Mur ligase middle domain HYDSHO_RS07380 PF00730 HhH-GPD superfamily base excision DNA repair protein HYDSHO_RS07380 PF00633 Helix-hairpin-helix motif HYDSHO_RS07380 PF10576 Iron-sulfur binding domain of endonuclease III HYDSHO_RS07390 PF00771 FHIPEP family HYDSHO_RS07395 PF00448 SRP54-type protein, GTPase domain HYDSHO_RS07400 PF10609 NUBPL iron-transfer P-loop NTPase HYDSHO_RS07405 PF03167 Uracil DNA glycosylase superfamily HYDSHO_RS07410 PF01161 Phosphatidylethanolamine-binding protein HYDSHO_RS07415 PF00004 ATPase family associated with various cellular activities (AAA) HYDSHO_RS07415 PF07724 AAA domain (Cdc48 subfamily) HYDSHO_RS07415 PF17871 AAA lid domain HYDSHO_RS07415 PF02861 Clp amino terminal domain, pathogenicity island component HYDSHO_RS07415 PF10431 C-terminal, D2-small domain, of ClpB protein HYDSHO_RS07430 PF05140 ResB-like family HYDSHO_RS07440 PF01327 Polypeptide deformylase HYDSHO_RS07445 PF02683 Cytochrome C biogenesis protein transmembrane region HYDSHO_RS07450 PF03023 Lipid II flippase MurJ HYDSHO_RS07455 PF04493 Endonuclease V HYDSHO_RS07460 PF01871 AMMECR1 HYDSHO_RS07470 PF08267 Cobalamin-independent synthase, N-terminal domain HYDSHO_RS07470 PF01717 Cobalamin-independent synthase, Catalytic domain HYDSHO_RS07475 PF00762 Ferrochelatase HYDSHO_RS07485 PF00551 Formyl transferase HYDSHO_RS07485 PF02911 Formyl transferase, C-terminal domain HYDSHO_RS07490 PF02441 Flavoprotein HYDSHO_RS07495 PF02224 Cytidylate kinase HYDSHO_RS07505 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain HYDSHO_RS07505 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain HYDSHO_RS07510 PF02374 Anion-transporting ATPase HYDSHO_RS07510 PF17886 HSP20-like domain found in ArsA HYDSHO_RS07515 PF13419 Haloacid dehalogenase-like hydrolase HYDSHO_RS07520 PF03079 ARD/ARD' family HYDSHO_RS07525 PF00596 Class II Aldolase and Adducin N-terminal domain HYDSHO_RS07535 PF08245 Mur ligase middle domain HYDSHO_RS07540 PF07992 Pyridine nucleotide-disulphide oxidoreductase HYDSHO_RS07540 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HYDSHO_RS07550 PF01103 Surface antigen HYDSHO_RS07550 PF07244 Surface antigen variable number repeat HYDSHO_RS07555 PF00849 RNA pseudouridylate synthase HYDSHO_RS07555 PF01479 S4 domain HYDSHO_RS07565 PF00300 Histidine phosphatase superfamily (branch 1) HYDSHO_RS07570 PF01206 Sulfurtransferase TusA HYDSHO_RS07575 PF02441 Flavoprotein HYDSHO_RS07575 PF04127 DNA / pantothenate metabolism flavoprotein HYDSHO_RS07580 PF00437 Type II/IV secretion system protein HYDSHO_RS07585 PF00111 2Fe-2S iron-sulfur cluster binding domain HYDSHO_RS07590 PF01435 Peptidase family M48 HYDSHO_RS07595 PF04542 Sigma-70 region 2 HYDSHO_RS07595 PF04539 Sigma-70 region 3 HYDSHO_RS07595 PF04545 Sigma-70, region 4 HYDSHO_RS07595 PF03979 Sigma-70 factor, region 1.1 HYDSHO_RS07595 PF04546 Sigma-70, non-essential region HYDSHO_RS07595 PF00140 Sigma-70 factor, region 1.2 HYDSHO_RS07600 PF08275 DNA primase catalytic core, N-terminal domain HYDSHO_RS07600 PF01807 CHC2 zinc finger HYDSHO_RS07615 PF00032 Cytochrome b(C-terminal)/b6/petD HYDSHO_RS07615 PF00033 Cytochrome b/b6/petB HYDSHO_RS07625 PF02272 DHHA1 domain HYDSHO_RS07625 PF01411 tRNA synthetases class II (A) HYDSHO_RS07625 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HYDSHO_RS07635 PF16363 GDP-mannose 4,6 dehydratase HYDSHO_RS07640 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase HYDSHO_RS07645 PF00483 Nucleotidyl transferase HYDSHO_RS07650 PF00005 ABC transporter HYDSHO_RS07650 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HYDSHO_RS07655 PF00403 Heavy-metal-associated domain HYDSHO_RS07660 PF02219 Methylenetetrahydrofolate reductase HYDSHO_RS07665 PF02581 Thiamine monophosphate synthase HYDSHO_RS07675 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HYDSHO_RS07675 PF00460 Flagella basal body rod protein HYDSHO_RS07680 PF06418 CTP synthase N-terminus HYDSHO_RS07680 PF00117 Glutamine amidotransferase class-I HYDSHO_RS07695 PF04055 Radical SAM superfamily HYDSHO_RS07695 PF00919 Uncharacterized protein family UPF0004 HYDSHO_RS07700 PF04055 Radical SAM superfamily HYDSHO_RS07700 PF06463 Molybdenum Cofactor Synthesis C HYDSHO_RS07705 PF02391 MoaE protein HYDSHO_RS07710 PF00231 ATP synthase HYDSHO_RS07715 PF01171 PP-loop family HYDSHO_RS07720 PF01168 Alanine racemase, N-terminal domain HYDSHO_RS07735 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B HYDSHO_RS07740 PF00465 Iron-containing alcohol dehydrogenase HYDSHO_RS07750 PF01061 ABC-2 type transporter HYDSHO_RS07755 PF00005 ABC transporter HYDSHO_RS07755 PF14524 Wzt C-terminal domain HYDSHO_RS07785 PF05050 Methyltransferase FkbM domain HYDSHO_RS07805 PF00535 Glycosyl transferase family 2 HYDSHO_RS07835 PF16363 GDP-mannose 4,6 dehydratase HYDSHO_RS07860 PF00482 Type II secretion system (T2SS), protein F HYDSHO_RS07865 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain HYDSHO_RS07865 PF00437 Type II/IV secretion system protein HYDSHO_RS07870 PF07963 Prokaryotic N-terminal methylation motif HYDSHO_RS07870 PF08334 Type II secretion system (T2SS), protein G HYDSHO_RS07875 PF00263 Bacterial type II and III secretion system protein HYDSHO_RS07875 PF03958 Bacterial type II/III secretion system short domain HYDSHO_RS07900 PF00294 pfkB family carbohydrate kinase HYDSHO_RS07900 PF01467 Cytidylyltransferase-like HYDSHO_RS07905 PF08011 PD-(D/E)XK nuclease superfamily HYDSHO_RS07905 PF09820 Predicted AAA-ATPase HYDSHO_RS07915 PF01368 DHH family HYDSHO_RS07915 PF02272 DHHA1 domain HYDSHO_RS07920 PF02896 PEP-utilising enzyme, TIM barrel domain HYDSHO_RS07920 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain HYDSHO_RS07920 PF00391 PEP-utilising enzyme, mobile domain HYDSHO_RS07935 PF01791 DeoC/LacD family aldolase HYDSHO_RS07940 PF02092 Glycyl-tRNA synthetase beta subunit HYDSHO_RS07940 PF05746 DALR anticodon binding domain HYDSHO_RS07945 PF02091 Glycyl-tRNA synthetase alpha subunit HYDSHO_RS07950 PF01909 Nucleotidyltransferase domain HYDSHO_RS07960 PF02875 Mur ligase family, glutamate ligase domain HYDSHO_RS07960 PF08245 Mur ligase middle domain HYDSHO_RS07965 PF01966 HD domain HYDSHO_RS07965 PF01743 Poly A polymerase head domain HYDSHO_RS07965 PF12627 Probable RNA and SrmB- binding site of polymerase A HYDSHO_RS07970 PF01066 CDP-alcohol phosphatidyltransferase HYDSHO_RS07975 PF00156 Phosphoribosyl transferase domain HYDSHO_RS07990 PF00733 Asparagine synthase HYDSHO_RS07990 PF13537 Glutamine amidotransferase domain HYDSHO_RS07995 PF03091 CutA1 divalent ion tolerance protein HYDSHO_RS08005 PF02677 Epoxyqueuosine reductase QueH HYDSHO_RS08010 PF00793 DAHP synthetase I family HYDSHO_RS08050 PF14579 Helix-hairpin-helix motif HYDSHO_RS08050 PF02811 PHP domain HYDSHO_RS08050 PF07733 Bacterial DNA polymerase III alpha NTPase domain HYDSHO_RS08050 PF17657 Bacterial DNA polymerase III alpha subunit finger domain HYDSHO_RS08055 PF12849 PBP superfamily domain HYDSHO_RS08060 PF00528 Binding-protein-dependent transport system inner membrane component HYDSHO_RS08065 PF00528 Binding-protein-dependent transport system inner membrane component HYDSHO_RS08070 PF00005 ABC transporter HYDSHO_RS08075 PF00300 Histidine phosphatase superfamily (branch 1) HYDSHO_RS08090 PF02153 Prephenate dehydrogenase HYDSHO_RS08100 PF00204 DNA gyrase B HYDSHO_RS08100 PF01751 Toprim domain HYDSHO_RS08100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HYDSHO_RS08100 PF00986 DNA gyrase B subunit, carboxyl terminus HYDSHO_RS08105 PF00403 Heavy-metal-associated domain HYDSHO_RS08115 PF12792 CSS motif domain associated with EAL HYDSHO_RS08115 PF00563 EAL domain HYDSHO_RS08120 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HYDSHO_RS08125 PF17384 RimP C-terminal SH3 domain HYDSHO_RS08125 PF02576 RimP N-terminal domain HYDSHO_RS08130 PF13184 NusA-like KH domain HYDSHO_RS08130 PF08529 NusA N-terminal domain HYDSHO_RS08130 PF00575 S1 RNA binding domain HYDSHO_RS08135 PF05958 tRNA (Uracil-5-)-methyltransferase HYDSHO_RS08140 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HYDSHO_RS08150 PF00107 Zinc-binding dehydrogenase HYDSHO_RS08150 PF08240 Alcohol dehydrogenase GroES-like domain HYDSHO_RS08175 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HYDSHO_RS08190 PF06969 HemN C-terminal domain HYDSHO_RS08190 PF04055 Radical SAM superfamily HYDSHO_RS08195 PF02021 Uncharacterised protein family UPF0102 HYDSHO_RS08200 PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase HYDSHO_RS08215 PF02618 YceG-like family HYDSHO_RS08225 PF09706 CRISPR-associated protein (Cas_CXXC_CXXC)