locus-tag class description AUC43_RS00015 PF00291 Pyridoxal-phosphate dependent enzyme AUC43_RS00020 PF00132 Bacterial transferase hexapeptide (six repeats) AUC43_RS00030 PF00248 Aldo/keto reductase family AUC43_RS00035 PF05552 Conserved TM helix AUC43_RS00035 PF00924 Mechanosensitive ion channel AUC43_RS00040 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AUC43_RS00055 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AUC43_RS00060 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AUC43_RS00060 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AUC43_RS00060 PF01799 [2Fe-2S] binding domain AUC43_RS00060 PF00111 2Fe-2S iron-sulfur cluster binding domain AUC43_RS00065 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AUC43_RS00065 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AUC43_RS00080 PF00576 HIUase/Transthyretin family AUC43_RS00095 PF01546 Peptidase family M20/M25/M40 AUC43_RS00095 PF07687 Peptidase dimerisation domain AUC43_RS00100 PF01979 Amidohydrolase family AUC43_RS00110 PF13478 XdhC Rossmann domain AUC43_RS00110 PF02625 XdhC and CoxI family AUC43_RS00125 PF00005 ABC transporter AUC43_RS00130 PF07690 Major Facilitator Superfamily AUC43_RS00165 PF01809 Putative membrane protein insertion efficiency factor AUC43_RS00175 PF01790 Prolipoprotein diacylglyceryl transferase AUC43_RS00180 PF02540 NAD synthase AUC43_RS00180 PF00795 Carbon-nitrogen hydrolase AUC43_RS00185 PF14622 Ribonuclease-III-like AUC43_RS00185 PF00035 Double-stranded RNA binding motif AUC43_RS00190 PF00109 Beta-ketoacyl synthase, N-terminal domain AUC43_RS00190 PF02801 Beta-ketoacyl synthase, C-terminal domain AUC43_RS00195 PF00550 Phosphopantetheine attachment site AUC43_RS00205 PF02887 Pyruvate kinase, alpha/beta domain AUC43_RS00205 PF00224 Pyruvate kinase, barrel domain AUC43_RS00215 PF01649 Ribosomal protein S20 AUC43_RS00220 PF00561 alpha/beta hydrolase fold AUC43_RS00225 PF02527 rRNA small subunit methyltransferase G AUC43_RS00230 PF08281 Sigma-70, region 4 AUC43_RS00230 PF04542 Sigma-70 region 2 AUC43_RS00240 PF01702 Queuine tRNA-ribosyltransferase AUC43_RS00255 PF08544 GHMP kinases C terminal AUC43_RS00255 PF00288 GHMP kinases N terminal domain AUC43_RS00260 PF02397 Bacterial sugar transferase AUC43_RS00270 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AUC43_RS00280 PF01053 Cys/Met metabolism PLP-dependent enzyme AUC43_RS00285 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AUC43_RS00290 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AUC43_RS00290 PF02874 ATP synthase alpha/beta family, beta-barrel domain AUC43_RS00300 PF14572 Phosphoribosyl synthetase-associated domain AUC43_RS00300 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AUC43_RS00310 PF14693 Ribosomal protein TL5, C-terminal domain AUC43_RS00310 PF01386 Ribosomal L25p family AUC43_RS00315 PF01195 Peptidyl-tRNA hydrolase AUC43_RS00320 PF09334 tRNA synthetases class I (M) AUC43_RS00320 PF08264 Anticodon-binding domain of tRNA AUC43_RS00320 PF01588 Putative tRNA binding domain AUC43_RS00335 PF01641 SelR domain AUC43_RS00340 PF00679 Elongation factor G C-terminus AUC43_RS00340 PF03144 Elongation factor Tu domain 2 AUC43_RS00340 PF00009 Elongation factor Tu GTP binding domain AUC43_RS00340 PF14492 Elongation Factor G, domain II AUC43_RS00355 PF16355 Domain of unknown function (DUF4982) AUC43_RS00355 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 AUC43_RS00355 PF00703 Glycosyl hydrolases family 2 AUC43_RS00355 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AUC43_RS00355 PF02837 Glycosyl hydrolases family 2, sugar binding domain AUC43_RS00360 PF08032 RNA 2'-O ribose methyltransferase substrate binding AUC43_RS00360 PF00588 SpoU rRNA Methylase family AUC43_RS00365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AUC43_RS00365 PF01590 GAF domain AUC43_RS00365 PF00512 His Kinase A (phospho-acceptor) domain AUC43_RS00365 PF08446 PAS fold AUC43_RS00365 PF00360 Phytochrome region AUC43_RS00370 PF00072 Response regulator receiver domain AUC43_RS00380 PF10576 Iron-sulfur binding domain of endonuclease III AUC43_RS00380 PF00730 HhH-GPD superfamily base excision DNA repair protein AUC43_RS00380 PF00633 Helix-hairpin-helix motif AUC43_RS00385 PF02594 Uncharacterised ACR, YggU family COG1872 AUC43_RS00395 PF01522 Polysaccharide deacetylase AUC43_RS00400 PF00291 Pyridoxal-phosphate dependent enzyme AUC43_RS00405 PF03466 LysR substrate binding domain AUC43_RS00405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AUC43_RS00410 PF04389 Peptidase family M28 AUC43_RS00420 PF13340 Putative transposase of IS4/5 family (DUF4096) AUC43_RS00430 PF07703 Alpha-2-macroglobulin bait region domain AUC43_RS00430 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain AUC43_RS00430 PF17962 Bacterial macroglobulin domain 6 AUC43_RS00430 PF01835 MG2 domain AUC43_RS00430 PF11974 Bacterial alpha-2-macroglobulin MG3 domain AUC43_RS00430 PF00207 Alpha-2-macroglobulin family AUC43_RS00430 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain AUC43_RS00440 PF00082 Subtilase family AUC43_RS00445 PF05922 Peptidase inhibitor I9 AUC43_RS00445 PF00082 Subtilase family AUC43_RS00450 PF06832 Penicillin-Binding Protein C-terminus Family AUC43_RS00450 PF00912 Transglycosylase AUC43_RS00450 PF00905 Penicillin binding protein transpeptidase domain AUC43_RS00460 PF08450 SMP-30/Gluconolactonase/LRE-like region AUC43_RS00465 PF05035 2-keto-3-deoxy-galactonokinase AUC43_RS00470 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AUC43_RS00470 PF13378 Enolase C-terminal domain-like AUC43_RS00480 PF00300 Histidine phosphatase superfamily (branch 1) AUC43_RS00505 PF01575 MaoC like domain AUC43_RS00510 PF00326 Prolyl oligopeptidase family AUC43_RS00525 PF00171 Aldehyde dehydrogenase family AUC43_RS00530 PF02311 AraC-like ligand binding domain AUC43_RS00530 PF12833 Helix-turn-helix domain AUC43_RS00535 PF01062 Bestrophin, RFP-TM, chloride channel AUC43_RS00545 PF01272 Transcription elongation factor, GreA/GreB, C-term AUC43_RS00545 PF03449 Transcription elongation factor, N-terminal AUC43_RS00550 PF07690 Major Facilitator Superfamily AUC43_RS00555 PF04321 RmlD substrate binding domain AUC43_RS00565 PF00561 alpha/beta hydrolase fold AUC43_RS00595 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AUC43_RS00605 PF00230 Major intrinsic protein AUC43_RS00620 PF13460 NAD(P)H-binding AUC43_RS00645 PF00781 Diacylglycerol kinase catalytic domain AUC43_RS00695 PF18030 RimK PreATP-grasp domain AUC43_RS00695 PF08443 RimK-like ATP-grasp domain AUC43_RS00700 PF08443 RimK-like ATP-grasp domain AUC43_RS00700 PF18030 RimK PreATP-grasp domain AUC43_RS00705 PF00535 Glycosyl transferase family 2 AUC43_RS00710 PF07995 Glucose / Sorbosone dehydrogenase AUC43_RS00720 PF01661 Macro domain AUC43_RS00725 PF02401 LytB protein AUC43_RS00730 PF02224 Cytidylate kinase AUC43_RS00740 PF01979 Amidohydrolase family AUC43_RS00740 PF13382 Adenine deaminase C-terminal domain AUC43_RS00750 PF00072 Response regulator receiver domain AUC43_RS00750 PF04397 LytTr DNA-binding domain AUC43_RS00755 PF00571 CBS domain AUC43_RS00755 PF00291 Pyridoxal-phosphate dependent enzyme AUC43_RS00760 PF02629 CoA binding domain AUC43_RS00760 PF00549 CoA-ligase AUC43_RS00770 PF07992 Pyridine nucleotide-disulphide oxidoreductase AUC43_RS00770 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AUC43_RS00775 PF00180 Isocitrate/isopropylmalate dehydrogenase AUC43_RS00780 PF00675 Insulinase (Peptidase family M16) AUC43_RS00780 PF05193 Peptidase M16 inactive domain AUC43_RS00785 PF12169 DNA polymerase III subunits gamma and tau domain III AUC43_RS00835 PF08281 Sigma-70, region 4 AUC43_RS00835 PF04542 Sigma-70 region 2 AUC43_RS00855 PF08281 Sigma-70, region 4 AUC43_RS00855 PF04542 Sigma-70 region 2 AUC43_RS00875 PF03851 UV-endonuclease UvdE AUC43_RS00890 PF10518 TAT (twin-arginine translocation) pathway signal sequence AUC43_RS00890 PF00149 Calcineurin-like phosphoesterase AUC43_RS00895 PF04002 RadC-like JAB domain AUC43_RS00905 PF03575 Peptidase family S51 AUC43_RS00930 PF00128 Alpha amylase, catalytic domain AUC43_RS00930 PF02903 Alpha amylase, N-terminal ig-like domain AUC43_RS00930 PF16657 Maltogenic Amylase, C-terminal domain AUC43_RS00950 PF03483 B3/4 domain AUC43_RS00950 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain AUC43_RS00950 PF01588 Putative tRNA binding domain AUC43_RS00950 PF03147 Ferredoxin-fold anticodon binding domain AUC43_RS00950 PF03484 tRNA synthetase B5 domain AUC43_RS00955 PF05193 Peptidase M16 inactive domain AUC43_RS00955 PF00675 Insulinase (Peptidase family M16) AUC43_RS00970 PF01966 HD domain AUC43_RS00970 PF01966 HD domain AUC43_RS00970 PF12072 Domain of unknown function (DUF3552) AUC43_RS00970 PF00013 KH domain AUC43_RS00970 PF00013 KH domain AUC43_RS00970 PF12072 Domain of unknown function (DUF3552) AUC43_RS00975 PF01510 N-acetylmuramoyl-L-alanine amidase AUC43_RS00975 PF01471 Putative peptidoglycan binding domain AUC43_RS00980 PF00155 Aminotransferase class I and II AUC43_RS01000 PF01934 Protein of unknown function DUF86 AUC43_RS01010 PF07724 AAA domain (Cdc48 subfamily) AUC43_RS01010 PF00004 ATPase family associated with various cellular activities (AAA) AUC43_RS01010 PF17871 AAA lid domain AUC43_RS01010 PF10431 C-terminal, D2-small domain, of ClpB protein AUC43_RS01010 PF02861 Clp amino terminal domain, pathogenicity island component AUC43_RS01015 PF01112 Asparaginase AUC43_RS01035 PF00293 NUDIX domain AUC43_RS01050 PF13340 Putative transposase of IS4/5 family (DUF4096) AUC43_RS01085 PF10566 Glycoside hydrolase 97 AUC43_RS01085 PF14508 Glycosyl-hydrolase 97 N-terminal AUC43_RS01085 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation AUC43_RS01090 PF00578 AhpC/TSA family AUC43_RS01095 PF01925 Sulfite exporter TauE/SafE AUC43_RS01100 PF00581 Rhodanese-like domain AUC43_RS01105 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AUC43_RS01140 PF05726 Pirin C-terminal cupin domain AUC43_RS01140 PF02678 Pirin AUC43_RS01155 PF00326 Prolyl oligopeptidase family AUC43_RS01155 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain AUC43_RS01180 PF00326 Prolyl oligopeptidase family AUC43_RS01205 PF00691 OmpA family AUC43_RS01205 PF05736 OprF membrane domain AUC43_RS01210 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AUC43_RS01210 PF00361 Proton-conducting membrane transporter AUC43_RS01215 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AUC43_RS01220 PF08281 Sigma-70, region 4 AUC43_RS01220 PF04542 Sigma-70 region 2 AUC43_RS01230 PF01022 Bacterial regulatory protein, arsR family AUC43_RS01265 PF00107 Zinc-binding dehydrogenase AUC43_RS01265 PF08240 Alcohol dehydrogenase GroES-like domain AUC43_RS01270 PF12823 Domain of unknown function (DUF3817) AUC43_RS01285 PF04493 Endonuclease V AUC43_RS01290 PF00749 tRNA synthetases class I (E and Q), catalytic domain AUC43_RS01315 PF00361 Proton-conducting membrane transporter AUC43_RS01320 PF00361 Proton-conducting membrane transporter AUC43_RS01330 PF01427 D-ala-D-ala dipeptidase AUC43_RS01335 PF00106 short chain dehydrogenase AUC43_RS01340 PF03717 Penicillin-binding Protein dimerisation domain AUC43_RS01340 PF00905 Penicillin binding protein transpeptidase domain AUC43_RS01340 PF05223 NTF2-like N-terminal transpeptidase domain AUC43_RS01360 PF01808 AICARFT/IMPCHase bienzyme AUC43_RS01360 PF02142 MGS-like domain AUC43_RS01405 PF07992 Pyridine nucleotide-disulphide oxidoreductase AUC43_RS01410 PF05193 Peptidase M16 inactive domain AUC43_RS01425 PF01066 CDP-alcohol phosphatidyltransferase AUC43_RS01430 PF00753 Metallo-beta-lactamase superfamily AUC43_RS01435 PF01266 FAD dependent oxidoreductase AUC43_RS01435 PF05430 S-adenosyl-L-methionine-dependent methyltransferase AUC43_RS01475 PF01578 Cytochrome C assembly protein AUC43_RS01475 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal AUC43_RS01490 PF00111 2Fe-2S iron-sulfur cluster binding domain AUC43_RS01500 PF00313 'Cold-shock' DNA-binding domain AUC43_RS01510 PF13419 Haloacid dehalogenase-like hydrolase AUC43_RS01520 PF00171 Aldehyde dehydrogenase family AUC43_RS01530 PF01627 Hpt domain AUC43_RS01530 PF02895 Signal transducing histidine kinase, homodimeric domain AUC43_RS01530 PF01584 CheW-like domain AUC43_RS01530 PF07194 P2 response regulator binding domain AUC43_RS01530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AUC43_RS01535 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 AUC43_RS01540 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AUC43_RS01545 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AUC43_RS01550 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AUC43_RS01560 PF10531 SLBB domain AUC43_RS01560 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AUC43_RS01560 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AUC43_RS01565 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal AUC43_RS01565 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AUC43_RS01565 PF00384 Molybdopterin oxidoreductase AUC43_RS01570 PF00146 NADH dehydrogenase AUC43_RS01575 PF12838 4Fe-4S dicluster domain AUC43_RS01580 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 AUC43_RS01590 PF02938 GAD domain AUC43_RS01590 PF01336 OB-fold nucleic acid binding domain AUC43_RS01590 PF00152 tRNA synthetases class II (D, K and N) AUC43_RS01605 PF14437 MafB19-like deaminase AUC43_RS01610 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AUC43_RS01610 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AUC43_RS01615 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AUC43_RS01620 PF03825 Nucleoside H+ symporter AUC43_RS01630 PF00334 Nucleoside diphosphate kinase AUC43_RS01640 PF02272 DHHA1 domain AUC43_RS01640 PF01368 DHH family AUC43_RS01645 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AUC43_RS01645 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AUC43_RS01650 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AUC43_RS01650 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AUC43_RS01660 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AUC43_RS01660 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AUC43_RS01665 PF11967 Recombination protein O N terminal AUC43_RS01665 PF02565 Recombination protein O C terminal AUC43_RS01675 PF00265 Thymidine kinase AUC43_RS01680 PF00111 2Fe-2S iron-sulfur cluster binding domain AUC43_RS01700 PF01098 Cell cycle protein AUC43_RS01735 PF13520 Amino acid permease AUC43_RS01745 PF00814 Glycoprotease family AUC43_RS01750 PF03572 Peptidase family S41 AUC43_RS01750 PF13180 PDZ domain AUC43_RS01750 PF01471 Putative peptidoglycan binding domain AUC43_RS01755 PF00825 Ribonuclease P AUC43_RS01760 PF00468 Ribosomal protein L34 AUC43_RS01785 PF00270 DEAD/DEAH box helicase AUC43_RS01785 PF00271 Helicase conserved C-terminal domain AUC43_RS01810 PF00664 ABC transporter transmembrane region AUC43_RS01810 PF00005 ABC transporter AUC43_RS01820 PF13580 SIS domain AUC43_RS01825 PF13335 Magnesium chelatase, subunit ChlI C-terminal AUC43_RS01825 PF01078 Magnesium chelatase, subunit ChlI AUC43_RS01860 PF01546 Peptidase family M20/M25/M40 AUC43_RS01860 PF07687 Peptidase dimerisation domain AUC43_RS01870 PF02660 Glycerol-3-phosphate acyltransferase AUC43_RS01880 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AUC43_RS01880 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AUC43_RS01895 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain AUC43_RS01905 PF07690 Major Facilitator Superfamily AUC43_RS01910 PF01081 KDPG and KHG aldolase AUC43_RS01915 PF00294 pfkB family carbohydrate kinase AUC43_RS01920 PF02614 Glucuronate isomerase AUC43_RS01925 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus AUC43_RS01925 PF08666 SAF domain AUC43_RS01930 PF01232 Mannitol dehydrogenase Rossmann domain AUC43_RS01930 PF08125 Mannitol dehydrogenase C-terminal domain AUC43_RS01940 PF07980 SusD family AUC43_RS01940 PF14322 Starch-binding associating with outer membrane AUC43_RS01945 PF00593 TonB dependent receptor AUC43_RS01945 PF07715 TonB-dependent Receptor Plug Domain AUC43_RS01950 PF04962 KduI/IolB family AUC43_RS01960 PF04616 Glycosyl hydrolases family 43 AUC43_RS01960 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain AUC43_RS01965 PF01557 Fumarylacetoacetate (FAA) hydrolase family AUC43_RS01970 PF00474 Sodium:solute symporter family AUC43_RS01975 PF07676 WD40-like Beta Propeller Repeat AUC43_RS01975 PF00326 Prolyl oligopeptidase family AUC43_RS01980 PF07470 Glycosyl Hydrolase Family 88 AUC43_RS01985 PF13472 GDSL-like Lipase/Acylhydrolase family AUC43_RS01995 PF00356 Bacterial regulatory proteins, lacI family AUC43_RS02010 PF00121 Triosephosphate isomerase AUC43_RS02020 PF00005 ABC transporter AUC43_RS02020 PF17755 UvrA DNA-binding domain AUC43_RS02020 PF17760 UvrA interaction domain AUC43_RS02035 PF12146 Serine aminopeptidase, S33 AUC43_RS02045 PF00111 2Fe-2S iron-sulfur cluster binding domain AUC43_RS02045 PF10518 TAT (twin-arginine translocation) pathway signal sequence AUC43_RS02045 PF01799 [2Fe-2S] binding domain AUC43_RS02050 PF03450 CO dehydrogenase flavoprotein C-terminal domain AUC43_RS02050 PF00941 FAD binding domain in molybdopterin dehydrogenase AUC43_RS02055 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AUC43_RS02055 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AUC43_RS02060 PF12804 MobA-like NTP transferase domain AUC43_RS02060 PF00132 Bacterial transferase hexapeptide (six repeats) AUC43_RS02075 PF08281 Sigma-70, region 4 AUC43_RS02075 PF04542 Sigma-70 region 2 AUC43_RS02085 PF00633 Helix-hairpin-helix motif AUC43_RS02085 PF10576 Iron-sulfur binding domain of endonuclease III AUC43_RS02085 PF00730 HhH-GPD superfamily base excision DNA repair protein AUC43_RS02090 PF00534 Glycosyl transferases group 1 AUC43_RS02090 PF13439 Glycosyltransferase Family 4 AUC43_RS02105 PF10150 Ribonuclease E/G family AUC43_RS02105 PF00575 S1 RNA binding domain AUC43_RS02115 PF00216 Bacterial DNA-binding protein AUC43_RS02120 PF14815 NUDIX domain AUC43_RS02120 PF00730 HhH-GPD superfamily base excision DNA repair protein AUC43_RS02120 PF00633 Helix-hairpin-helix motif AUC43_RS02125 PF00436 Single-strand binding protein family AUC43_RS02135 PF00270 DEAD/DEAH box helicase AUC43_RS02135 PF00271 Helicase conserved C-terminal domain AUC43_RS02135 PF17191 RecG wedge domain AUC43_RS02145 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AUC43_RS02145 PF02770 Acyl-CoA dehydrogenase, middle domain AUC43_RS02145 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AUC43_RS02150 PF02803 Thiolase, C-terminal domain AUC43_RS02150 PF00108 Thiolase, N-terminal domain AUC43_RS02155 PF00378 Enoyl-CoA hydratase/isomerase AUC43_RS02155 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AUC43_RS02155 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AUC43_RS02165 PF00501 AMP-binding enzyme AUC43_RS02170 PF00491 Arginase family AUC43_RS02180 PF13580 SIS domain AUC43_RS02195 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AUC43_RS02195 PF01926 50S ribosome-binding GTPase AUC43_RS02200 PF01926 50S ribosome-binding GTPase AUC43_RS02200 PF07650 KH domain AUC43_RS02205 PF00762 Ferrochelatase AUC43_RS02225 PF00266 Aminotransferase class-V AUC43_RS02230 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AUC43_RS02230 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AUC43_RS02230 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AUC43_RS02230 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AUC43_RS02235 PF03819 MazG nucleotide pyrophosphohydrolase domain AUC43_RS02240 PF01618 MotA/TolQ/ExbB proton channel family AUC43_RS02255 PF03544 Gram-negative bacterial TonB protein C-terminal AUC43_RS02270 PF12849 PBP superfamily domain AUC43_RS02280 PF01479 S4 domain AUC43_RS02280 PF00849 RNA pseudouridylate synthase AUC43_RS02295 PF07244 Surface antigen variable number repeat AUC43_RS02295 PF01103 Surface antigen AUC43_RS02300 PF01255 Putative undecaprenyl diphosphate synthase AUC43_RS02315 PF01513 ATP-NAD kinase AUC43_RS02330 PF12697 Alpha/beta hydrolase family AUC43_RS02335 PF00117 Glutamine amidotransferase class-I AUC43_RS02350 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ AUC43_RS02365 PF07726 ATPase family associated with various cellular activities (AAA) AUC43_RS02365 PF17863 AAA lid domain AUC43_RS02390 PF08463 EcoEI R protein C-terminal AUC43_RS02390 PF00271 Helicase conserved C-terminal domain AUC43_RS02390 PF04851 Type III restriction enzyme, res subunit AUC43_RS02390 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) AUC43_RS02395 PF01420 Type I restriction modification DNA specificity domain AUC43_RS02405 PF02384 N-6 DNA Methylase AUC43_RS02405 PF12161 HsdM N-terminal domain AUC43_RS02420 PF00196 Bacterial regulatory proteins, luxR family AUC43_RS02420 PF00072 Response regulator receiver domain AUC43_RS02455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AUC43_RS02455 PF01590 GAF domain AUC43_RS02455 PF00360 Phytochrome region AUC43_RS02455 PF08446 PAS fold AUC43_RS02460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AUC43_RS02460 PF07689 KaiB domain AUC43_RS02465 PF07969 Amidohydrolase family AUC43_RS02485 PF05188 MutS domain II AUC43_RS02485 PF05192 MutS domain III AUC43_RS02485 PF05190 MutS family domain IV AUC43_RS02485 PF00488 MutS domain V AUC43_RS02485 PF01624 MutS domain I AUC43_RS02490 PF08032 RNA 2'-O ribose methyltransferase substrate binding AUC43_RS02490 PF00588 SpoU rRNA Methylase family AUC43_RS02505 PF03471 Transporter associated domain AUC43_RS02505 PF03741 Integral membrane protein TerC family AUC43_RS02510 PF04461 Protein of unknown function (DUF520) AUC43_RS02535 PF04307 LexA-binding, inner membrane-associated putative hydrolase AUC43_RS02540 PF03461 TRCF domain AUC43_RS02540 PF00270 DEAD/DEAH box helicase AUC43_RS02540 PF17757 UvrB interaction domain AUC43_RS02540 PF02559 CarD-like/TRCF domain AUC43_RS02540 PF00271 Helicase conserved C-terminal domain AUC43_RS02555 PF13673 Acetyltransferase (GNAT) domain AUC43_RS02560 PF01323 DSBA-like thioredoxin domain AUC43_RS02565 PF05974 Domain of unknown function (DUF892) AUC43_RS02570 PF00248 Aldo/keto reductase family AUC43_RS02575 PF01472 PUA domain AUC43_RS02575 PF00696 Amino acid kinase family AUC43_RS02595 PF07992 Pyridine nucleotide-disulphide oxidoreductase AUC43_RS02610 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AUC43_RS02610 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AUC43_RS02615 PF04264 YceI-like domain AUC43_RS02630 PF01625 Peptide methionine sulfoxide reductase AUC43_RS02640 PF00360 Phytochrome region AUC43_RS02640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AUC43_RS02640 PF01590 GAF domain AUC43_RS02640 PF00512 His Kinase A (phospho-acceptor) domain AUC43_RS02640 PF08446 PAS fold AUC43_RS02645 PF00155 Aminotransferase class I and II AUC43_RS02650 PF00795 Carbon-nitrogen hydrolase AUC43_RS02660 PF08245 Mur ligase middle domain AUC43_RS02660 PF01225 Mur ligase family, catalytic domain AUC43_RS02660 PF02875 Mur ligase family, glutamate ligase domain AUC43_RS02665 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase AUC43_RS02670 PF13439 Glycosyltransferase Family 4 AUC43_RS02670 PF00534 Glycosyl transferases group 1 AUC43_RS02675 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AUC43_RS02680 PF13167 GTP-binding GTPase N-terminal AUC43_RS02680 PF16360 GTP-binding GTPase Middle Region AUC43_RS02680 PF01926 50S ribosome-binding GTPase AUC43_RS02705 PF00550 Phosphopantetheine attachment site AUC43_RS02705 PF07993 Male sterility protein AUC43_RS02705 PF00501 AMP-binding enzyme AUC43_RS02710 PF00106 short chain dehydrogenase AUC43_RS02715 PF02627 Carboxymuconolactone decarboxylase family AUC43_RS02725 PF13089 Polyphosphate kinase N-terminal domain AUC43_RS02725 PF17941 Polyphosphate kinase C-terminal domain 1 AUC43_RS02725 PF02503 Polyphosphate kinase middle domain AUC43_RS02725 PF13090 Polyphosphate kinase C-terminal domain 2 AUC43_RS02785 PF00989 PAS fold AUC43_RS02785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AUC43_RS02785 PF00512 His Kinase A (phospho-acceptor) domain AUC43_RS02785 PF08447 PAS fold AUC43_RS02805 PF07678 A-macroglobulin TED domain AUC43_RS02805 PF01835 MG2 domain AUC43_RS02805 PF00207 Alpha-2-macroglobulin family AUC43_RS02805 PF07703 Alpha-2-macroglobulin bait region domain AUC43_RS02805 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain AUC43_RS02825 PF00313 'Cold-shock' DNA-binding domain AUC43_RS02835 PF04468 PSP1 C-terminal conserved region AUC43_RS02855 PF00107 Zinc-binding dehydrogenase AUC43_RS02855 PF08240 Alcohol dehydrogenase GroES-like domain AUC43_RS02855 PF13823 Alcohol dehydrogenase GroES-associated AUC43_RS02865 PF00149 Calcineurin-like phosphoesterase AUC43_RS02870 PF02589 LUD domain AUC43_RS02875 PF06480 FtsH Extracellular AUC43_RS02875 PF01434 Peptidase family M41 AUC43_RS02875 PF00004 ATPase family associated with various cellular activities (AAA) AUC43_RS02875 PF17862 AAA+ lid domain AUC43_RS02885 PF02237 Biotin protein ligase C terminal domain AUC43_RS02885 PF08279 HTH domain AUC43_RS02885 PF03099 Biotin/lipoate A/B protein ligase family AUC43_RS02905 PF08032 RNA 2'-O ribose methyltransferase substrate binding AUC43_RS02905 PF00588 SpoU rRNA Methylase family AUC43_RS02910 PF00483 Nucleotidyl transferase AUC43_RS02910 PF01050 Mannose-6-phosphate isomerase AUC43_RS02915 PF00571 CBS domain AUC43_RS02915 PF01380 SIS domain AUC43_RS02920 PF09382 RQC domain AUC43_RS02920 PF16124 RecQ zinc-binding AUC43_RS02920 PF00570 HRDC domain AUC43_RS02920 PF00271 Helicase conserved C-terminal domain AUC43_RS02920 PF00270 DEAD/DEAH box helicase AUC43_RS02925 PF06491 Disulphide isomerase AUC43_RS02930 PF04616 Glycosyl hydrolases family 43 AUC43_RS02935 PF05726 Pirin C-terminal cupin domain AUC43_RS02935 PF02678 Pirin AUC43_RS02950 PF00005 ABC transporter AUC43_RS02950 PF00571 CBS domain AUC43_RS02955 PF00528 Binding-protein-dependent transport system inner membrane component AUC43_RS02970 PF00512 His Kinase A (phospho-acceptor) domain AUC43_RS02970 PF18698 Histidine kinase sensor domain AUC43_RS02970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AUC43_RS02970 PF00672 HAMP domain AUC43_RS02975 PF00072 Response regulator receiver domain AUC43_RS02975 PF00196 Bacterial regulatory proteins, luxR family AUC43_RS02980 PF01433 Peptidase family M1 domain AUC43_RS02980 PF11838 ERAP1-like C-terminal domain AUC43_RS02985 PF02682 Carboxyltransferase domain, subdomain C and D AUC43_RS02990 PF02626 Carboxyltransferase domain, subdomain A and B AUC43_RS02995 PF03746 LamB/YcsF family AUC43_RS03000 PF01566 Natural resistance-associated macrophage protein AUC43_RS03005 PF16901 C-terminal domain of alpha-glycerophosphate oxidase AUC43_RS03005 PF01266 FAD dependent oxidoreductase AUC43_RS03010 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin AUC43_RS03025 PF17755 UvrA DNA-binding domain AUC43_RS03065 PF01757 Acyltransferase family AUC43_RS03090 PF01757 Acyltransferase family AUC43_RS03095 PF07690 Major Facilitator Superfamily AUC43_RS03115 PF00011 Hsp20/alpha crystallin family AUC43_RS03120 PF00793 DAHP synthetase I family AUC43_RS03120 PF18152 DAHP synthase ferredoxin-like domain AUC43_RS03125 PF01842 ACT domain AUC43_RS03125 PF02153 Prephenate dehydrogenase AUC43_RS03130 PF00155 Aminotransferase class I and II AUC43_RS03140 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AUC43_RS03150 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AUC43_RS03150 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AUC43_RS03160 PF02678 Pirin AUC43_RS03160 PF05726 Pirin C-terminal cupin domain AUC43_RS03165 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AUC43_RS03165 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AUC43_RS03175 PF00356 Bacterial regulatory proteins, lacI family AUC43_RS03185 PF13419 Haloacid dehalogenase-like hydrolase AUC43_RS03195 PF13302 Acetyltransferase (GNAT) domain AUC43_RS03205 PF13302 Acetyltransferase (GNAT) domain AUC43_RS03215 PF01062 Bestrophin, RFP-TM, chloride channel AUC43_RS03245 PF00317 Ribonucleotide reductase, all-alpha domain AUC43_RS03245 PF03477 ATP cone domain AUC43_RS03245 PF02867 Ribonucleotide reductase, barrel domain AUC43_RS03260 PF00829 Ribosomal prokaryotic L21 protein AUC43_RS03265 PF01016 Ribosomal L27 protein AUC43_RS03285 PF04055 Radical SAM superfamily AUC43_RS03285 PF06969 HemN C-terminal domain AUC43_RS03290 PF07495 Y_Y_Y domain AUC43_RS03290 PF00072 Response regulator receiver domain AUC43_RS03290 PF07494 Two component regulator propeller AUC43_RS03290 PF12833 Helix-turn-helix domain AUC43_RS03290 PF00512 His Kinase A (phospho-acceptor) domain AUC43_RS03290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AUC43_RS03295 PF00593 TonB dependent receptor AUC43_RS03295 PF07715 TonB-dependent Receptor Plug Domain AUC43_RS03305 PF00083 Sugar (and other) transporter AUC43_RS03310 PF00294 pfkB family carbohydrate kinase AUC43_RS03310 PF01467 Cytidylyltransferase-like AUC43_RS03315 PF08244 Glycosyl hydrolases family 32 C terminal AUC43_RS03315 PF00251 Glycosyl hydrolases family 32 N-terminal domain AUC43_RS03335 PF09905 DNA-binding protein VF530 AUC43_RS03340 PF01183 Glycosyl hydrolases family 25 AUC43_RS03350 PF03330 Lytic transglycolase AUC43_RS03365 PF02586 SOS response associated peptidase (SRAP) AUC43_RS03370 PF00343 Carbohydrate phosphorylase AUC43_RS03370 PF11897 Protein of unknown function (DUF3417) AUC43_RS03380 PF09087 Cyclomaltodextrinase, N-terminal AUC43_RS03380 PF10438 Cyclo-malto-dextrinase C-terminal domain AUC43_RS03380 PF00128 Alpha amylase, catalytic domain AUC43_RS03385 PF00106 short chain dehydrogenase AUC43_RS03390 PF01833 IPT/TIG domain AUC43_RS03390 PF00686 Starch binding domain AUC43_RS03390 PF00128 Alpha amylase, catalytic domain AUC43_RS03405 PF01593 Flavin containing amine oxidoreductase AUC43_RS03415 PF14821 Threonine synthase N terminus AUC43_RS03415 PF00291 Pyridoxal-phosphate dependent enzyme AUC43_RS03420 PF08544 GHMP kinases C terminal AUC43_RS03420 PF00288 GHMP kinases N terminal domain AUC43_RS03425 PF00696 Amino acid kinase family AUC43_RS03425 PF00742 Homoserine dehydrogenase AUC43_RS03425 PF01842 ACT domain AUC43_RS03425 PF13840 ACT domain AUC43_RS03425 PF03447 Homoserine dehydrogenase, NAD binding domain AUC43_RS03430 PF00472 RF-1 domain AUC43_RS03430 PF03462 PCRF domain AUC43_RS03445 PF06415 BPG-independent PGAM N-terminus (iPGM_N) AUC43_RS03445 PF01676 Metalloenzyme superfamily AUC43_RS03465 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AUC43_RS03465 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AUC43_RS03490 PF01556 DnaJ C terminal domain AUC43_RS03490 PF00226 DnaJ domain AUC43_RS03520 PF07728 AAA domain (dynein-related subfamily) AUC43_RS03520 PF12102 Domain of unknown function (DUF3578) AUC43_RS03555 PF00550 Phosphopantetheine attachment site AUC43_RS03560 PF00873 AcrB/AcrD/AcrF family AUC43_RS03575 PF00440 Bacterial regulatory proteins, tetR family AUC43_RS03580 PF02542 YgbB family AUC43_RS03590 PF02225 PA domain AUC43_RS03590 PF04389 Peptidase family M28 AUC43_RS03600 PF02589 LUD domain AUC43_RS03600 PF13183 4Fe-4S dicluster domain AUC43_RS03600 PF11870 Domain of unknown function (DUF3390) AUC43_RS03610 PF03313 Serine dehydratase alpha chain AUC43_RS03615 PF01641 SelR domain AUC43_RS03620 PF01256 Carbohydrate kinase AUC43_RS03635 PF00719 Inorganic pyrophosphatase AUC43_RS03640 PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase AUC43_RS03645 PF13419 Haloacid dehalogenase-like hydrolase AUC43_RS03655 PF00231 ATP synthase AUC43_RS03660 PF02874 ATP synthase alpha/beta family, beta-barrel domain AUC43_RS03660 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AUC43_RS03660 PF00306 ATP synthase alpha/beta chain, C terminal domain AUC43_RS03665 PF00213 ATP synthase delta (OSCP) subunit AUC43_RS03670 PF00430 ATP synthase B/B' CF(0) AUC43_RS03675 PF00137 ATP synthase subunit C AUC43_RS03680 PF00119 ATP synthase A chain AUC43_RS03700 PF00905 Penicillin binding protein transpeptidase domain AUC43_RS03700 PF00912 Transglycosylase AUC43_RS03700 PF17092 Penicillin-binding protein OB-like domain AUC43_RS03705 PF08459 UvrC Helix-hairpin-helix N-terminal AUC43_RS03705 PF01541 GIY-YIG catalytic domain AUC43_RS03705 PF02151 UvrB/uvrC motif AUC43_RS03725 PF03781 Sulfatase-modifying factor enzyme 1 AUC43_RS03745 PF00953 Glycosyl transferase family 4 AUC43_RS03755 PF03099 Biotin/lipoate A/B protein ligase family AUC43_RS03760 PF02021 Uncharacterised protein family UPF0102 AUC43_RS03770 PF03575 Peptidase family S51 AUC43_RS03775 PF01769 Divalent cation transporter AUC43_RS03775 PF00571 CBS domain AUC43_RS03775 PF03448 MgtE intracellular N domain AUC43_RS03780 PF00472 RF-1 domain AUC43_RS03785 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AUC43_RS03785 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AUC43_RS03795 PF00561 alpha/beta hydrolase fold AUC43_RS03805 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AUC43_RS03810 PF02421 Ferrous iron transport protein B AUC43_RS03810 PF07670 Nucleoside recognition AUC43_RS03810 PF07664 Ferrous iron transport protein B C terminus AUC43_RS03845 PF01168 Alanine racemase, N-terminal domain AUC43_RS03845 PF00842 Alanine racemase, C-terminal domain AUC43_RS03860 PF01979 Amidohydrolase family AUC43_RS03865 PF09308 LuxQ, periplasmic AUC43_RS03865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AUC43_RS03865 PF00512 His Kinase A (phospho-acceptor) domain AUC43_RS03865 PF00072 Response regulator receiver domain AUC43_RS03885 PF07715 TonB-dependent Receptor Plug Domain AUC43_RS03885 PF00593 TonB dependent receptor AUC43_RS03895 PF00128 Alpha amylase, catalytic domain AUC43_RS03900 PF03633 Glycosyl hydrolase family 65, C-terminal domain AUC43_RS03900 PF03636 Glycosyl hydrolase family 65, N-terminal domain AUC43_RS03900 PF03632 Glycosyl hydrolase family 65 central catalytic domain AUC43_RS03905 PF01204 Trehalase AUC43_RS03920 PF02631 RecX family AUC43_RS03925 PF00027 Cyclic nucleotide-binding domain AUC43_RS03925 PF07885 Ion channel AUC43_RS03940 PF00291 Pyridoxal-phosphate dependent enzyme AUC43_RS03975 PF00665 Integrase core domain AUC43_RS03975 PF13276 HTH-like domain AUC43_RS03975 PF13333 Integrase core domain AUC43_RS03980 PF02222 ATP-grasp domain AUC43_RS03980 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain AUC43_RS03985 PF00731 AIR carboxylase AUC43_RS03990 PF01979 Amidohydrolase family AUC43_RS03995 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AUC43_RS03995 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AUC43_RS04010 PF01180 Dihydroorotate dehydrogenase AUC43_RS04020 PF01546 Peptidase family M20/M25/M40 AUC43_RS04020 PF07687 Peptidase dimerisation domain AUC43_RS04030 PF17149 Periplasmic sensor domain found in signal transduction proteins AUC43_RS04030 PF00072 Response regulator receiver domain AUC43_RS04030 PF00672 HAMP domain AUC43_RS04030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AUC43_RS04030 PF00512 His Kinase A (phospho-acceptor) domain AUC43_RS04030 PF01627 Hpt domain AUC43_RS04035 PF12697 Alpha/beta hydrolase family AUC43_RS04045 PF01884 PcrB family AUC43_RS04060 PF01556 DnaJ C terminal domain AUC43_RS04060 PF00684 DnaJ central domain AUC43_RS04060 PF00226 DnaJ domain AUC43_RS04065 PF02469 Fasciclin domain AUC43_RS04075 PF13183 4Fe-4S dicluster domain AUC43_RS04075 PF02754 Cysteine-rich domain AUC43_RS04080 PF13183 4Fe-4S dicluster domain AUC43_RS04080 PF02665 Nitrate reductase gamma subunit AUC43_RS04080 PF02754 Cysteine-rich domain AUC43_RS04090 PF00691 OmpA family AUC43_RS04090 PF01389 OmpA-like transmembrane domain AUC43_RS04105 PF00108 Thiolase, N-terminal domain AUC43_RS04105 PF02803 Thiolase, C-terminal domain AUC43_RS04110 PF01416 tRNA pseudouridine synthase AUC43_RS04115 PF00005 ABC transporter AUC43_RS04115 PF00664 ABC transporter transmembrane region AUC43_RS04130 PF00107 Zinc-binding dehydrogenase AUC43_RS04130 PF13823 Alcohol dehydrogenase GroES-associated AUC43_RS04130 PF08240 Alcohol dehydrogenase GroES-like domain AUC43_RS04155 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AUC43_RS04160 PF00664 ABC transporter transmembrane region AUC43_RS04160 PF00005 ABC transporter AUC43_RS04165 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AUC43_RS04165 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AUC43_RS04170 PF01029 NusB family AUC43_RS04180 PF00180 Isocitrate/isopropylmalate dehydrogenase AUC43_RS04180 PF18324 Hypothetical protein TT1725 AUC43_RS04190 PF02699 Preprotein translocase subunit AUC43_RS04200 PF01121 Dephospho-CoA kinase AUC43_RS04205 PF01022 Bacterial regulatory protein, arsR family AUC43_RS04215 PF03641 Possible lysine decarboxylase AUC43_RS04225 PF00005 ABC transporter AUC43_RS04240 PF00005 ABC transporter AUC43_RS04240 PF12848 ABC transporter AUC43_RS04250 PF01467 Cytidylyltransferase-like AUC43_RS04250 PF00294 pfkB family carbohydrate kinase AUC43_RS04260 PF02569 Pantoate-beta-alanine ligase AUC43_RS04265 PF00534 Glycosyl transferases group 1 AUC43_RS04265 PF08323 Starch synthase catalytic domain AUC43_RS04275 PF01380 SIS domain AUC43_RS04285 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AUC43_RS04285 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AUC43_RS04290 PF01042 Endoribonuclease L-PSP AUC43_RS04300 PF00156 Phosphoribosyl transferase domain AUC43_RS04300 PF05139 Erythromycin esterase AUC43_RS04305 PF00749 tRNA synthetases class I (E and Q), catalytic domain AUC43_RS04345 PF00005 ABC transporter AUC43_RS04345 PF12399 Branched-chain amino acid ATP-binding cassette transporter AUC43_RS04370 PF00183 Hsp90 protein AUC43_RS04385 PF07715 TonB-dependent Receptor Plug Domain AUC43_RS04385 PF00593 TonB dependent receptor AUC43_RS04390 PF00593 TonB dependent receptor AUC43_RS04390 PF07715 TonB-dependent Receptor Plug Domain AUC43_RS04395 PF01545 Cation efflux family AUC43_RS04400 PF07690 Major Facilitator Superfamily AUC43_RS04435 PF03330 Lytic transglycolase AUC43_RS04440 PF01804 Penicillin amidase AUC43_RS04465 PF00877 NlpC/P60 family AUC43_RS04485 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AUC43_RS04485 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AUC43_RS04485 PF02770 Acyl-CoA dehydrogenase, middle domain AUC43_RS04495 PF02272 DHHA1 domain AUC43_RS04495 PF17768 RecJ OB domain AUC43_RS04495 PF10141 Single-strand DNA-specific exonuclease, C terminal domain AUC43_RS04495 PF01368 DHH family AUC43_RS04505 PF05698 Bacterial trigger factor protein (TF) C-terminus AUC43_RS04525 PF03309 Type III pantothenate kinase AUC43_RS04540 PF00885 6,7-dimethyl-8-ribityllumazine synthase AUC43_RS04550 PF00676 Dehydrogenase E1 component AUC43_RS04555 PF02463 RecF/RecN/SMC N terminal domain AUC43_RS04565 PF03009 Glycerophosphoryl diester phosphodiesterase family AUC43_RS04585 PF00348 Polyprenyl synthetase AUC43_RS04590 PF08206 Ribonuclease B OB domain AUC43_RS04590 PF00773 RNB domain AUC43_RS04590 PF17876 Cold shock domain AUC43_RS04590 PF00575 S1 RNA binding domain AUC43_RS04595 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AUC43_RS04595 PF00005 ABC transporter AUC43_RS04605 PF13340 Putative transposase of IS4/5 family (DUF4096) AUC43_RS04610 PF01252 Signal peptidase (SPase) II AUC43_RS04615 PF00133 tRNA synthetases class I (I, L, M and V) AUC43_RS04615 PF08264 Anticodon-binding domain of tRNA AUC43_RS04625 PF03129 Anticodon binding domain AUC43_RS04630 PF01384 Phosphate transporter family AUC43_RS04655 PF01134 Glucose inhibited division protein A AUC43_RS04655 PF13932 GidA associated domain AUC43_RS04665 PF02130 Uncharacterized protein family UPF0054 AUC43_RS04680 PF03372 Endonuclease/Exonuclease/phosphatase family AUC43_RS04695 PF00156 Phosphoribosyl transferase domain AUC43_RS04700 PF03781 Sulfatase-modifying factor enzyme 1 AUC43_RS04745 PF10415 Fumarase C C-terminus AUC43_RS04745 PF00206 Lyase AUC43_RS04765 PF07676 WD40-like Beta Propeller Repeat AUC43_RS04765 PF00326 Prolyl oligopeptidase family AUC43_RS04770 PF00561 alpha/beta hydrolase fold AUC43_RS04790 PF05922 Peptidase inhibitor I9 AUC43_RS04790 PF00082 Subtilase family AUC43_RS04790 PF04151 Bacterial pre-peptidase C-terminal domain AUC43_RS04825 PF07690 Major Facilitator Superfamily AUC43_RS04830 PF13533 Biotin-lipoyl like AUC43_RS04845 PF00158 Sigma-54 interaction domain AUC43_RS04845 PF01590 GAF domain AUC43_RS04860 PF01367 5'-3' exonuclease, C-terminal SAM fold AUC43_RS04860 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AUC43_RS04860 PF00476 DNA polymerase family A AUC43_RS04860 PF01612 3'-5' exonuclease AUC43_RS04865 PF00072 Response regulator receiver domain AUC43_RS04865 PF04397 LytTr DNA-binding domain AUC43_RS04870 PF01494 FAD binding domain AUC43_RS04900 PF00266 Aminotransferase class-V AUC43_RS04915 PF06052 3-hydroxyanthranilic acid dioxygenase AUC43_RS04930 PF01501 Glycosyl transferase family 8 AUC43_RS04930 PF00535 Glycosyl transferase family 2 AUC43_RS04970 PF00535 Glycosyl transferase family 2 AUC43_RS04980 PF00171 Aldehyde dehydrogenase family AUC43_RS04990 PF00132 Bacterial transferase hexapeptide (six repeats) AUC43_RS04995 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AUC43_RS04995 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AUC43_RS04995 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AUC43_RS05000 PF16363 GDP-mannose 4,6 dehydratase AUC43_RS05005 PF16363 GDP-mannose 4,6 dehydratase AUC43_RS05010 PF01370 NAD dependent epimerase/dehydratase family AUC43_RS05015 PF00483 Nucleotidyl transferase AUC43_RS05020 PF18073 Rubredoxin metal binding domain AUC43_RS05025 PF00578 AhpC/TSA family AUC43_RS05045 PF00459 Inositol monophosphatase family AUC43_RS05050 PF00795 Carbon-nitrogen hydrolase AUC43_RS05055 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AUC43_RS05060 PF01329 Pterin 4 alpha carbinolamine dehydratase AUC43_RS05075 PF00149 Calcineurin-like phosphoesterase AUC43_RS05095 PF00464 Serine hydroxymethyltransferase AUC43_RS05100 PF00902 Sec-independent protein translocase protein (TatC) AUC43_RS05105 PF02502 Ribose/Galactose Isomerase AUC43_RS05110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AUC43_RS05110 PF00512 His Kinase A (phospho-acceptor) domain AUC43_RS05115 PF01431 Peptidase family M13 AUC43_RS05115 PF05649 Peptidase family M13 AUC43_RS05120 PF00171 Aldehyde dehydrogenase family AUC43_RS05145 PF05974 Domain of unknown function (DUF892) AUC43_RS05160 PF01593 Flavin containing amine oxidoreductase AUC43_RS05170 PF17785 PUA-like domain AUC43_RS05170 PF10672 S-adenosylmethionine-dependent methyltransferase AUC43_RS05190 PF00271 Helicase conserved C-terminal domain AUC43_RS05190 PF00176 SNF2 family N-terminal domain AUC43_RS05190 PF04434 SWIM zinc finger AUC43_RS05195 PF02687 FtsX-like permease family AUC43_RS05195 PF12704 MacB-like periplasmic core domain AUC43_RS05205 PF02033 Ribosome-binding factor A AUC43_RS05220 PF02769 AIR synthase related protein, C-terminal domain AUC43_RS05220 PF00586 AIR synthase related protein, N-terminal domain AUC43_RS05230 PF02576 RimP N-terminal domain AUC43_RS05230 PF17384 RimP C-terminal SH3 domain AUC43_RS05235 PF08529 NusA N-terminal domain AUC43_RS05235 PF00575 S1 RNA binding domain AUC43_RS05235 PF13184 NusA-like KH domain AUC43_RS05240 PF11987 Translation-initiation factor 2 AUC43_RS05240 PF04760 Translation initiation factor IF-2, N-terminal region AUC43_RS05240 PF00009 Elongation factor Tu GTP binding domain AUC43_RS05250 PF01741 Large-conductance mechanosensitive channel, MscL AUC43_RS05255 PF00378 Enoyl-CoA hydratase/isomerase AUC43_RS05265 PF00692 dUTPase AUC43_RS05270 PF00132 Bacterial transferase hexapeptide (six repeats) AUC43_RS05270 PF12804 MobA-like NTP transferase domain AUC43_RS05270 PF14602 Hexapeptide repeat of succinyl-transferase AUC43_RS05295 PF02416 mttA/Hcf106 family AUC43_RS05300 PF02416 mttA/Hcf106 family AUC43_RS05305 PF01425 Amidase AUC43_RS05315 PF01476 LysM domain AUC43_RS05315 PF01464 Transglycosylase SLT domain AUC43_RS05325 PF01515 Phosphate acetyl/butaryl transferase AUC43_RS05325 PF03949 Malic enzyme, NAD binding domain AUC43_RS05325 PF00390 Malic enzyme, N-terminal domain AUC43_RS05330 PF01330 RuvA N terminal domain AUC43_RS05330 PF07499 RuvA, C-terminal domain AUC43_RS05340 PF01597 Glycine cleavage H-protein AUC43_RS05345 PF04389 Peptidase family M28 AUC43_RS05345 PF02225 PA domain AUC43_RS05355 PF08340 Domain of unknown function (DUF1732) AUC43_RS05355 PF03755 YicC-like family, N-terminal region AUC43_RS05360 PF00593 TonB dependent receptor AUC43_RS05365 PF00534 Glycosyl transferases group 1 AUC43_RS05365 PF13439 Glycosyltransferase Family 4 AUC43_RS05375 PF08453 Peptidase family M9 N-terminal AUC43_RS05375 PF01752 Collagenase AUC43_RS05390 PF09190 DALR domain AUC43_RS05390 PF01406 tRNA synthetases class I (C) catalytic domain AUC43_RS05400 PF17676 LD-carboxypeptidase C-terminal domain AUC43_RS05400 PF02016 LD-carboxypeptidase N-terminal domain AUC43_RS05415 PF00561 alpha/beta hydrolase fold AUC43_RS05420 PF01053 Cys/Met metabolism PLP-dependent enzyme AUC43_RS05445 PF02780 Transketolase, C-terminal domain AUC43_RS05445 PF02779 Transketolase, pyrimidine binding domain AUC43_RS05445 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AUC43_RS05450 PF00248 Aldo/keto reductase family AUC43_RS05455 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AUC43_RS05455 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AUC43_RS05460 PF00561 alpha/beta hydrolase fold AUC43_RS05470 PF01979 Amidohydrolase family AUC43_RS05480 PF07715 TonB-dependent Receptor Plug Domain AUC43_RS05480 PF00593 TonB dependent receptor AUC43_RS05485 PF14322 Starch-binding associating with outer membrane AUC43_RS05485 PF07980 SusD family AUC43_RS05490 PF04616 Glycosyl hydrolases family 43 AUC43_RS05490 PF05270 Alpha-L-arabinofuranosidase B (ABFB) domain AUC43_RS05495 PF04616 Glycosyl hydrolases family 43 AUC43_RS05500 PF01263 Aldose 1-epimerase AUC43_RS05505 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AUC43_RS05510 PF00596 Class II Aldolase and Adducin N-terminal domain AUC43_RS05515 PF02610 L-arabinose isomerase AUC43_RS05515 PF11762 L-arabinose isomerase C-terminal domain AUC43_RS05520 PF02018 Carbohydrate binding domain AUC43_RS05520 PF06964 Alpha-L-arabinofuranosidase C-terminal domain AUC43_RS05530 PF07944 Beta-L-arabinofuranosidase, GH127 AUC43_RS05535 PF16875 Glycosyl hydrolase family 36 N-terminal domain AUC43_RS05535 PF16874 Glycosyl hydrolase family 36 C-terminal domain AUC43_RS05545 PF00923 Transaldolase/Fructose-6-phosphate aldolase AUC43_RS05550 PF04616 Glycosyl hydrolases family 43 AUC43_RS05555 PF00356 Bacterial regulatory proteins, lacI family AUC43_RS05565 PF12697 Alpha/beta hydrolase family AUC43_RS05595 PF02774 Semialdehyde dehydrogenase, dimerisation domain AUC43_RS05595 PF01118 Semialdehyde dehydrogenase, NAD binding domain AUC43_RS05605 PF02245 Methylpurine-DNA glycosylase (MPG) AUC43_RS05615 PF07995 Glucose / Sorbosone dehydrogenase AUC43_RS05620 PF01545 Cation efflux family AUC43_RS05620 PF16916 Dimerisation domain of Zinc Transporter AUC43_RS05625 PF01566 Natural resistance-associated macrophage protein AUC43_RS05630 PF00593 TonB dependent receptor AUC43_RS05630 PF07715 TonB-dependent Receptor Plug Domain AUC43_RS05640 PF07715 TonB-dependent Receptor Plug Domain AUC43_RS05640 PF00593 TonB dependent receptor AUC43_RS05665 PF03860 Domain of Unknown Function (DUF326) AUC43_RS05685 PF13673 Acetyltransferase (GNAT) domain AUC43_RS05710 PF16338 Domain of unknown function (DUF4968) AUC43_RS05710 PF17137 Domain of unknown function (DUF5110) AUC43_RS05710 PF13802 Galactose mutarotase-like AUC43_RS05710 PF01055 Glycosyl hydrolases family 31 AUC43_RS05715 PF00356 Bacterial regulatory proteins, lacI family AUC43_RS05750 PF13333 Integrase core domain AUC43_RS05750 PF13276 HTH-like domain AUC43_RS05750 PF00665 Integrase core domain AUC43_RS05755 PF00970 Oxidoreductase FAD-binding domain AUC43_RS05755 PF00111 2Fe-2S iron-sulfur cluster binding domain AUC43_RS05755 PF00175 Oxidoreductase NAD-binding domain AUC43_RS05760 PF01925 Sulfite exporter TauE/SafE AUC43_RS05765 PF01223 DNA/RNA non-specific endonuclease AUC43_RS05770 PF01546 Peptidase family M20/M25/M40 AUC43_RS05780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AUC43_RS05780 PF00512 His Kinase A (phospho-acceptor) domain AUC43_RS05780 PF18415 Histidine kinase receptor ArcB trans-membrane domain AUC43_RS05780 PF01627 Hpt domain AUC43_RS05780 PF00989 PAS fold AUC43_RS05780 PF00072 Response regulator receiver domain AUC43_RS05790 PF04397 LytTr DNA-binding domain AUC43_RS05790 PF00072 Response regulator receiver domain AUC43_RS05805 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AUC43_RS05805 PF13378 Enolase C-terminal domain-like AUC43_RS05825 PF00072 Response regulator receiver domain AUC43_RS05825 PF13426 PAS domain AUC43_RS05825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AUC43_RS05845 PF00271 Helicase conserved C-terminal domain AUC43_RS05845 PF04851 Type III restriction enzyme, res subunit AUC43_RS05845 PF12344 Ultra-violet resistance protein B AUC43_RS05845 PF02151 UvrB/uvrC motif AUC43_RS05845 PF17757 UvrB interaction domain AUC43_RS05855 PF04542 Sigma-70 region 2 AUC43_RS05855 PF08281 Sigma-70, region 4 AUC43_RS05860 PF01488 Shikimate / quinate 5-dehydrogenase AUC43_RS05860 PF08501 Shikimate dehydrogenase substrate binding domain AUC43_RS05860 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AUC43_RS05865 PF09335 SNARE associated Golgi protein AUC43_RS05870 PF01062 Bestrophin, RFP-TM, chloride channel AUC43_RS05885 PF02679 (2R)-phospho-3-sulfolactate synthase (ComA) AUC43_RS05895 PF16363 GDP-mannose 4,6 dehydratase AUC43_RS05905 PF13614 AAA domain AUC43_RS05905 PF13807 G-rich domain on putative tyrosine kinase AUC43_RS05905 PF02706 Chain length determinant protein AUC43_RS05915 PF02770 Acyl-CoA dehydrogenase, middle domain AUC43_RS05915 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AUC43_RS05915 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AUC43_RS05920 PF01165 Ribosomal protein S21 AUC43_RS05925 PF02899 Phage integrase, N-terminal SAM-like domain AUC43_RS05925 PF00589 Phage integrase family AUC43_RS05935 PF02772 S-adenosylmethionine synthetase, central domain AUC43_RS05935 PF02773 S-adenosylmethionine synthetase, C-terminal domain AUC43_RS05935 PF00438 S-adenosylmethionine synthetase, N-terminal domain AUC43_RS05955 PF05221 S-adenosyl-L-homocysteine hydrolase AUC43_RS05955 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AUC43_RS05960 PF00296 Luciferase-like monooxygenase AUC43_RS05965 PF00326 Prolyl oligopeptidase family AUC43_RS05965 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain AUC43_RS05975 PF00483 Nucleotidyl transferase AUC43_RS05980 PF04011 LemA family AUC43_RS06005 PF01202 Shikimate kinase AUC43_RS06010 PF00528 Binding-protein-dependent transport system inner membrane component AUC43_RS06025 PF00809 Pterin binding enzyme AUC43_RS06030 PF02457 DisA bacterial checkpoint controller nucleotide-binding AUC43_RS06040 PF00155 Aminotransferase class I and II AUC43_RS06055 PF01370 NAD dependent epimerase/dehydratase family AUC43_RS06060 PF03741 Integral membrane protein TerC family AUC43_RS06065 PF03600 Citrate transporter AUC43_RS06070 PF07715 TonB-dependent Receptor Plug Domain AUC43_RS06070 PF00593 TonB dependent receptor AUC43_RS06075 PF00486 Transcriptional regulatory protein, C terminal AUC43_RS06075 PF00072 Response regulator receiver domain AUC43_RS06080 PF00512 His Kinase A (phospho-acceptor) domain AUC43_RS06080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AUC43_RS06085 PF00561 alpha/beta hydrolase fold AUC43_RS06100 PF03631 Virulence factor BrkB AUC43_RS06110 PF04055 Radical SAM superfamily AUC43_RS06125 PF01266 FAD dependent oxidoreductase AUC43_RS06125 PF05430 S-adenosyl-L-methionine-dependent methyltransferase AUC43_RS06140 PF01812 5-formyltetrahydrofolate cyclo-ligase family AUC43_RS06150 PF10079 Bacillithiol biosynthesis BshC AUC43_RS06155 PF04055 Radical SAM superfamily AUC43_RS06155 PF18693 TRAM domain AUC43_RS06155 PF00919 Uncharacterized protein family UPF0004 AUC43_RS06165 PF01409 tRNA synthetases class II core domain (F) AUC43_RS06165 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AUC43_RS06190 PF00675 Insulinase (Peptidase family M16) AUC43_RS06190 PF05193 Peptidase M16 inactive domain AUC43_RS06205 PF02779 Transketolase, pyrimidine binding domain AUC43_RS06205 PF02780 Transketolase, C-terminal domain AUC43_RS06225 PF11009 Protein of unknown function (DUF2847) AUC43_RS06240 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family AUC43_RS06240 PF04055 Radical SAM superfamily AUC43_RS06255 PF02347 Glycine cleavage system P-protein AUC43_RS06270 PF05532 CsbD-like AUC43_RS06310 PF00889 Elongation factor TS AUC43_RS06315 PF00318 Ribosomal protein S2 AUC43_RS06320 PF00380 Ribosomal protein S9/S16 AUC43_RS06325 PF00572 Ribosomal protein L13 AUC43_RS06335 PF01479 S4 domain AUC43_RS06335 PF00849 RNA pseudouridylate synthase AUC43_RS06340 PF13340 Putative transposase of IS4/5 family (DUF4096) AUC43_RS06350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AUC43_RS06350 PF16736 Single Cache-like AUC43_RS06350 PF00989 PAS fold AUC43_RS06350 PF00512 His Kinase A (phospho-acceptor) domain AUC43_RS06355 PF00486 Transcriptional regulatory protein, C terminal AUC43_RS06355 PF00072 Response regulator receiver domain AUC43_RS06365 PF00154 recA bacterial DNA recombination protein AUC43_RS06395 PF07726 ATPase family associated with various cellular activities (AAA) AUC43_RS06395 PF17863 AAA lid domain AUC43_RS06405 PF09312 SurA N-terminal domain AUC43_RS06405 PF00639 PPIC-type PPIASE domain AUC43_RS06410 PF13581 Histidine kinase-like ATPase domain AUC43_RS06425 PF00478 IMP dehydrogenase / GMP reductase domain AUC43_RS06425 PF00571 CBS domain AUC43_RS06430 PF00106 short chain dehydrogenase AUC43_RS06440 PF00270 DEAD/DEAH box helicase AUC43_RS06440 PF04408 Helicase associated domain (HA2) AUC43_RS06440 PF00271 Helicase conserved C-terminal domain AUC43_RS06440 PF08482 ATP-dependent helicase C-terminal AUC43_RS06445 PF09844 Uncharacterized conserved protein (COG2071) AUC43_RS06450 PF00581 Rhodanese-like domain AUC43_RS06455 PF04973 Nicotinamide mononucleotide transporter AUC43_RS06480 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AUC43_RS06480 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AUC43_RS06480 PF02770 Acyl-CoA dehydrogenase, middle domain AUC43_RS06500 PF05496 Holliday junction DNA helicase RuvB P-loop domain AUC43_RS06500 PF05491 RuvB C-terminal winged helix domain AUC43_RS06500 PF17864 RuvB AAA lid domain AUC43_RS06505 PF08331 Domain of unknown function (DUF1730) AUC43_RS06540 PF01264 Chorismate synthase AUC43_RS06575 PF07549 SecD/SecF GG Motif AUC43_RS06575 PF02355 Protein export membrane protein AUC43_RS06595 PF00485 Phosphoribulokinase / Uridine kinase family AUC43_RS06600 PF01725 Ham1 family AUC43_RS06610 PF01197 Ribosomal protein L31 AUC43_RS06625 PF09115 DNA polymerase III, delta subunit, C terminal AUC43_RS06630 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain AUC43_RS06630 PF03900 Porphobilinogen deaminase, C-terminal domain AUC43_RS06635 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AUC43_RS06640 PF04321 RmlD substrate binding domain AUC43_RS06645 PF12911 N-terminal TM domain of oligopeptide transport permease C AUC43_RS06645 PF00528 Binding-protein-dependent transport system inner membrane component AUC43_RS06650 PF00528 Binding-protein-dependent transport system inner membrane component AUC43_RS06670 PF00072 Response regulator receiver domain AUC43_RS06670 PF04397 LytTr DNA-binding domain AUC43_RS06675 PF00072 Response regulator receiver domain AUC43_RS06675 PF01627 Hpt domain AUC43_RS06675 PF00512 His Kinase A (phospho-acceptor) domain AUC43_RS06675 PF00672 HAMP domain AUC43_RS06675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AUC43_RS06675 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AUC43_RS06680 PF05736 OprF membrane domain AUC43_RS06680 PF00691 OmpA family AUC43_RS06690 PF03069 Acetamidase/Formamidase family AUC43_RS06700 PF01964 Radical SAM ThiC family AUC43_RS06700 PF13667 ThiC-associated domain AUC43_RS06705 PF08543 Phosphomethylpyrimidine kinase AUC43_RS06710 PF02581 Thiamine monophosphate synthase AUC43_RS06715 PF05690 Thiazole biosynthesis protein ThiG AUC43_RS06720 PF06968 Biotin and Thiamin Synthesis associated domain AUC43_RS06720 PF04055 Radical SAM superfamily AUC43_RS06725 PF00581 Rhodanese-like domain AUC43_RS06725 PF00899 ThiF family AUC43_RS06740 PF00989 PAS fold AUC43_RS06740 PF00512 His Kinase A (phospho-acceptor) domain AUC43_RS06740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AUC43_RS06745 PF00989 PAS fold AUC43_RS06745 PF00672 HAMP domain AUC43_RS06745 PF00512 His Kinase A (phospho-acceptor) domain AUC43_RS06745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AUC43_RS06750 PF13426 PAS domain AUC43_RS06750 PF00072 Response regulator receiver domain AUC43_RS06750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AUC43_RS06755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AUC43_RS06755 PF00512 His Kinase A (phospho-acceptor) domain AUC43_RS06755 PF08448 PAS fold AUC43_RS06755 PF13188 PAS domain AUC43_RS06755 PF00072 Response regulator receiver domain AUC43_RS06760 PF08769 Sporulation initiation factor Spo0A C terminal AUC43_RS06760 PF00072 Response regulator receiver domain AUC43_RS06765 PF00211 Adenylate and Guanylate cyclase catalytic domain AUC43_RS06765 PF00672 HAMP domain AUC43_RS06770 PF00027 Cyclic nucleotide-binding domain AUC43_RS06770 PF07885 Ion channel AUC43_RS06775 PF00933 Glycosyl hydrolase family 3 N terminal domain AUC43_RS06775 PF01915 Glycosyl hydrolase family 3 C-terminal domain AUC43_RS06775 PF14310 Fibronectin type III-like domain AUC43_RS06780 PF00722 Glycosyl hydrolases family 16 AUC43_RS06785 PF00722 Glycosyl hydrolases family 16 AUC43_RS06795 PF07980 SusD family AUC43_RS06795 PF14322 Starch-binding associating with outer membrane AUC43_RS06800 PF00593 TonB dependent receptor AUC43_RS06800 PF07715 TonB-dependent Receptor Plug Domain AUC43_RS06825 PF07690 Major Facilitator Superfamily AUC43_RS06830 PF00691 OmpA family AUC43_RS06830 PF04972 BON domain AUC43_RS06850 PF02219 Methylenetetrahydrofolate reductase AUC43_RS06855 PF02574 Homocysteine S-methyltransferase AUC43_RS06855 PF00809 Pterin binding enzyme AUC43_RS06855 PF02965 Vitamin B12 dependent methionine synthase, activation domain AUC43_RS06855 PF02607 B12 binding domain AUC43_RS06855 PF02310 B12 binding domain AUC43_RS06860 PF08240 Alcohol dehydrogenase GroES-like domain AUC43_RS06860 PF00107 Zinc-binding dehydrogenase AUC43_RS06865 PF03453 MoeA N-terminal region (domain I and II) AUC43_RS06865 PF00994 Probable molybdopterin binding domain AUC43_RS06865 PF03454 MoeA C-terminal region (domain IV) AUC43_RS06870 PF01967 MoaC family AUC43_RS06875 PF12804 MobA-like NTP transferase domain AUC43_RS06885 PF02391 MoaE protein AUC43_RS06895 PF06463 Molybdenum Cofactor Synthesis C AUC43_RS06895 PF04055 Radical SAM superfamily AUC43_RS06900 PF12146 Serine aminopeptidase, S33 AUC43_RS06910 PF07690 Major Facilitator Superfamily AUC43_RS06920 PF00106 short chain dehydrogenase AUC43_RS06925 PF00488 MutS domain V AUC43_RS06925 PF05190 MutS family domain IV AUC43_RS06925 PF05192 MutS domain III AUC43_RS06925 PF05188 MutS domain II AUC43_RS06925 PF01624 MutS domain I AUC43_RS06935 PF00561 alpha/beta hydrolase fold AUC43_RS06940 PF00180 Isocitrate/isopropylmalate dehydrogenase AUC43_RS06945 PF02595 Glycerate kinase family AUC43_RS06950 PF00375 Sodium:dicarboxylate symporter family AUC43_RS06960 PF00593 TonB dependent receptor AUC43_RS06960 PF07715 TonB-dependent Receptor Plug Domain AUC43_RS06975 PF02634 FdhD/NarQ family AUC43_RS06985 PF00384 Molybdopterin oxidoreductase AUC43_RS06985 PF01568 Molydopterin dinucleotide binding domain AUC43_RS06990 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain AUC43_RS06990 PF01488 Shikimate / quinate 5-dehydrogenase AUC43_RS06990 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain AUC43_RS07010 PF01627 Hpt domain AUC43_RS07010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AUC43_RS07010 PF02895 Signal transducing histidine kinase, homodimeric domain AUC43_RS07010 PF01584 CheW-like domain AUC43_RS07010 PF07194 P2 response regulator binding domain AUC43_RS07015 PF01339 CheB methylesterase AUC43_RS07015 PF00072 Response regulator receiver domain AUC43_RS07020 PF00672 HAMP domain AUC43_RS07020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AUC43_RS07020 PF00512 His Kinase A (phospho-acceptor) domain AUC43_RS07020 PF13426 PAS domain AUC43_RS07025 PF13520 Amino acid permease AUC43_RS07035 PF00593 TonB dependent receptor AUC43_RS07035 PF07715 TonB-dependent Receptor Plug Domain AUC43_RS07050 PF00989 PAS fold AUC43_RS07050 PF00512 His Kinase A (phospho-acceptor) domain AUC43_RS07050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AUC43_RS07055 PF01207 Dihydrouridine synthase (Dus) AUC43_RS07070 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AUC43_RS07070 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AUC43_RS07075 PF02666 Phosphatidylserine decarboxylase AUC43_RS07080 PF03738 Glutathionylspermidine synthase preATP-grasp AUC43_RS07090 PF13185 GAF domain AUC43_RS07095 PF01872 RibD C-terminal domain AUC43_RS07095 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AUC43_RS07100 PF05175 Methyltransferase small domain AUC43_RS07100 PF17827 PrmC N-terminal domain AUC43_RS07105 PF06628 Catalase-related immune-responsive AUC43_RS07105 PF00199 Catalase AUC43_RS07110 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region AUC43_RS07110 PF00326 Prolyl oligopeptidase family AUC43_RS07130 PF03129 Anticodon binding domain AUC43_RS07130 PF09180 Prolyl-tRNA synthetase, C-terminal AUC43_RS07130 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AUC43_RS07140 PF12127 SigmaW regulon antibacterial AUC43_RS07145 PF00691 OmpA family AUC43_RS07150 PF00072 Response regulator receiver domain AUC43_RS07150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AUC43_RS07150 PF00512 His Kinase A (phospho-acceptor) domain AUC43_RS07150 PF09308 LuxQ, periplasmic AUC43_RS07155 PF04552 Sigma-54, DNA binding domain AUC43_RS07155 PF04963 Sigma-54 factor, core binding domain AUC43_RS07155 PF00309 Sigma-54 factor, Activator interacting domain (AID) AUC43_RS07160 PF01336 OB-fold nucleic acid binding domain AUC43_RS07160 PF00152 tRNA synthetases class II (D, K and N) AUC43_RS07170 PF17760 UvrA interaction domain AUC43_RS07170 PF17755 UvrA DNA-binding domain AUC43_RS07180 PF06736 Protein of unknown function (DUF1211) AUC43_RS07205 PF00378 Enoyl-CoA hydratase/isomerase AUC43_RS07210 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AUC43_RS07215 PF02547 Queuosine biosynthesis protein AUC43_RS07220 PF00005 ABC transporter AUC43_RS07220 PF12704 MacB-like periplasmic core domain AUC43_RS07220 PF02687 FtsX-like permease family AUC43_RS07225 PF00924 Mechanosensitive ion channel AUC43_RS07245 PF00072 Response regulator receiver domain AUC43_RS07245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AUC43_RS07245 PF13426 PAS domain AUC43_RS07265 PF02446 4-alpha-glucanotransferase AUC43_RS07275 PF07992 Pyridine nucleotide-disulphide oxidoreductase AUC43_RS07280 PF01734 Patatin-like phospholipase AUC43_RS07310 PF00593 TonB dependent receptor AUC43_RS07310 PF07715 TonB-dependent Receptor Plug Domain AUC43_RS07315 PF01327 Polypeptide deformylase AUC43_RS07320 PF03652 Holliday junction resolvase AUC43_RS07325 PF03572 Peptidase family S41 AUC43_RS07325 PF13180 PDZ domain AUC43_RS07330 PF04209 homogentisate 1,2-dioxygenase AUC43_RS07335 PF07676 WD40-like Beta Propeller Repeat AUC43_RS07335 PF14684 Tricorn protease C1 domain AUC43_RS07335 PF14685 Tricorn protease PDZ domain AUC43_RS07335 PF03572 Peptidase family S41 AUC43_RS07370 PF07687 Peptidase dimerisation domain AUC43_RS07370 PF01546 Peptidase family M20/M25/M40 AUC43_RS07375 PF02868 Thermolysin metallopeptidase, alpha-helical domain AUC43_RS07375 PF03413 Peptidase propeptide and YPEB domain AUC43_RS07375 PF07504 Fungalysin/Thermolysin Propeptide Motif AUC43_RS07375 PF01447 Thermolysin metallopeptidase, catalytic domain AUC43_RS07380 PF07504 Fungalysin/Thermolysin Propeptide Motif AUC43_RS07380 PF01447 Thermolysin metallopeptidase, catalytic domain AUC43_RS07380 PF02868 Thermolysin metallopeptidase, alpha-helical domain AUC43_RS07380 PF03413 Peptidase propeptide and YPEB domain AUC43_RS07395 PF00135 Carboxylesterase family AUC43_RS07400 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AUC43_RS07400 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AUC43_RS07420 PF13520 Amino acid permease AUC43_RS07435 PF00490 Delta-aminolevulinic acid dehydratase AUC43_RS07440 PF01593 Flavin containing amine oxidoreductase AUC43_RS07445 PF00202 Aminotransferase class-III AUC43_RS07455 PF00830 Ribosomal L28 family AUC43_RS07460 PF05195 Aminopeptidase P, N-terminal domain AUC43_RS07460 PF00557 Metallopeptidase family M24 AUC43_RS07465 PF00471 Ribosomal protein L33 AUC43_RS07470 PF02881 SRP54-type protein, helical bundle domain AUC43_RS07470 PF00448 SRP54-type protein, GTPase domain AUC43_RS07475 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AUC43_RS07475 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain AUC43_RS07475 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AUC43_RS07505 PF00565 Staphylococcal nuclease homologue AUC43_RS07540 PF01546 Peptidase family M20/M25/M40 AUC43_RS07565 PF01925 Sulfite exporter TauE/SafE AUC43_RS07575 PF00581 Rhodanese-like domain AUC43_RS07595 PF07690 Major Facilitator Superfamily AUC43_RS07620 PF02371 Transposase IS116/IS110/IS902 family AUC43_RS07620 PF01548 Transposase AUC43_RS07645 PF00512 His Kinase A (phospho-acceptor) domain AUC43_RS07645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AUC43_RS07650 PF13188 PAS domain AUC43_RS07650 PF00512 His Kinase A (phospho-acceptor) domain AUC43_RS07650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AUC43_RS07650 PF00989 PAS fold AUC43_RS07650 PF13426 PAS domain AUC43_RS07710 PF01915 Glycosyl hydrolase family 3 C-terminal domain AUC43_RS07710 PF00933 Glycosyl hydrolase family 3 N terminal domain AUC43_RS07710 PF14310 Fibronectin type III-like domain AUC43_RS07730 PF14322 Starch-binding associating with outer membrane AUC43_RS07730 PF07980 SusD family AUC43_RS07735 PF00593 TonB dependent receptor AUC43_RS07735 PF07715 TonB-dependent Receptor Plug Domain AUC43_RS07760 PF01425 Amidase AUC43_RS07785 PF00719 Inorganic pyrophosphatase AUC43_RS07820 PF00535 Glycosyl transferase family 2 AUC43_RS07830 PF08281 Sigma-70, region 4 AUC43_RS07830 PF04542 Sigma-70 region 2 AUC43_RS07840 PF00625 Guanylate kinase AUC43_RS07845 PF01467 Cytidylyltransferase-like AUC43_RS07850 PF01765 Ribosome recycling factor AUC43_RS07855 PF00696 Amino acid kinase family AUC43_RS07860 PF00364 Biotin-requiring enzyme AUC43_RS07865 PF11838 ERAP1-like C-terminal domain AUC43_RS07865 PF01433 Peptidase family M1 domain AUC43_RS07885 PF03144 Elongation factor Tu domain 2 AUC43_RS07885 PF00009 Elongation factor Tu GTP binding domain AUC43_RS07885 PF03143 Elongation factor Tu C-terminal domain AUC43_RS07900 PF00467 KOW motif AUC43_RS07900 PF02357 Transcription termination factor nusG AUC43_RS07905 PF03946 Ribosomal protein L11, N-terminal domain AUC43_RS07905 PF00298 Ribosomal protein L11, RNA binding domain AUC43_RS07910 PF00687 Ribosomal protein L1p/L10e family AUC43_RS07915 PF00466 Ribosomal protein L10 AUC43_RS07920 PF00542 Ribosomal protein L7/L12 C-terminal domain AUC43_RS07920 PF16320 Ribosomal protein L7/L12 dimerisation domain AUC43_RS07925 PF10385 RNA polymerase beta subunit external 1 domain AUC43_RS07925 PF00562 RNA polymerase Rpb2, domain 6 AUC43_RS07925 PF04560 RNA polymerase Rpb2, domain 7 AUC43_RS07925 PF04561 RNA polymerase Rpb2, domain 2 AUC43_RS07925 PF04563 RNA polymerase beta subunit AUC43_RS07925 PF04565 RNA polymerase Rpb2, domain 3 AUC43_RS07930 PF00623 RNA polymerase Rpb1, domain 2 AUC43_RS07930 PF04983 RNA polymerase Rpb1, domain 3 AUC43_RS07930 PF04997 RNA polymerase Rpb1, domain 1 AUC43_RS07930 PF04998 RNA polymerase Rpb1, domain 5 AUC43_RS07930 PF05000 RNA polymerase Rpb1, domain 4 AUC43_RS07940 PF00164 Ribosomal protein S12/S23 AUC43_RS07945 PF00177 Ribosomal protein S7p/S5e AUC43_RS07950 PF14492 Elongation Factor G, domain II AUC43_RS07950 PF03764 Elongation factor G, domain IV AUC43_RS07950 PF00009 Elongation factor Tu GTP binding domain AUC43_RS07950 PF03144 Elongation factor Tu domain 2 AUC43_RS07950 PF00679 Elongation factor G C-terminus AUC43_RS07955 PF00338 Ribosomal protein S10p/S20e AUC43_RS07965 PF00297 Ribosomal protein L3 AUC43_RS07970 PF00573 Ribosomal protein L4/L1 family AUC43_RS07975 PF00276 Ribosomal protein L23 AUC43_RS07980 PF03947 Ribosomal Proteins L2, C-terminal domain AUC43_RS07980 PF00181 Ribosomal Proteins L2, RNA binding domain AUC43_RS07985 PF00203 Ribosomal protein S19 AUC43_RS07990 PF00237 Ribosomal protein L22p/L17e AUC43_RS07995 PF00189 Ribosomal protein S3, C-terminal domain AUC43_RS07995 PF07650 KH domain AUC43_RS08000 PF00252 Ribosomal protein L16p/L10e AUC43_RS08005 PF00831 Ribosomal L29 protein AUC43_RS08010 PF00366 Ribosomal protein S17 AUC43_RS08015 PF00238 Ribosomal protein L14p/L23e AUC43_RS08020 PF00467 KOW motif AUC43_RS08020 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 AUC43_RS08025 PF00281 Ribosomal protein L5 AUC43_RS08025 PF00673 ribosomal L5P family C-terminus AUC43_RS08030 PF00253 Ribosomal protein S14p/S29e AUC43_RS08035 PF00410 Ribosomal protein S8 AUC43_RS08040 PF00347 Ribosomal protein L6 AUC43_RS08045 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast AUC43_RS08050 PF03719 Ribosomal protein S5, C-terminal domain AUC43_RS08050 PF00333 Ribosomal protein S5, N-terminal domain AUC43_RS08055 PF00327 Ribosomal protein L30p/L7e AUC43_RS08060 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A AUC43_RS08065 PF00344 SecY translocase AUC43_RS08070 PF00557 Metallopeptidase family M24 AUC43_RS08075 PF01176 Translation initiation factor 1A / IF-1 AUC43_RS08080 PF00444 Ribosomal protein L36 AUC43_RS08085 PF00416 Ribosomal protein S13/S18 AUC43_RS08090 PF00411 Ribosomal protein S11 AUC43_RS08095 PF00163 Ribosomal protein S4/S9 N-terminal domain AUC43_RS08095 PF01479 S4 domain AUC43_RS08100 PF01000 RNA polymerase Rpb3/RpoA insert domain AUC43_RS08100 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AUC43_RS08100 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AUC43_RS08105 PF01196 Ribosomal protein L17 AUC43_RS08110 PF03952 Enolase, N-terminal domain AUC43_RS08110 PF00113 Enolase, C-terminal TIM barrel domain AUC43_RS08135 PF00012 Hsp70 protein AUC43_RS08175 PF18390 Glycogen debranching enzyme C-terminal domain AUC43_RS08175 PF00128 Alpha amylase, catalytic domain AUC43_RS08175 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AUC43_RS08195 PF02541 Ppx/GppA phosphatase family AUC43_RS08200 PF01170 Putative RNA methylase family UPF0020 AUC43_RS08200 PF02926 THUMP domain AUC43_RS08200 PF10672 S-adenosylmethionine-dependent methyltransferase AUC43_RS08205 PF00905 Penicillin binding protein transpeptidase domain AUC43_RS08210 PF01678 Diaminopimelate epimerase AUC43_RS08225 PF03275 UDP-galactopyranose mutase AUC43_RS08235 PF04321 RmlD substrate binding domain AUC43_RS08240 PF07517 SecA DEAD-like domain AUC43_RS08240 PF01043 SecA preprotein cross-linking domain AUC43_RS08240 PF07516 SecA Wing and Scaffold domain AUC43_RS08250 PF01791 DeoC/LacD family aldolase AUC43_RS08260 PF01546 Peptidase family M20/M25/M40 AUC43_RS08260 PF07687 Peptidase dimerisation domain AUC43_RS08270 PF00011 Hsp20/alpha crystallin family AUC43_RS08275 PF13180 PDZ domain AUC43_RS08275 PF17820 PDZ domain AUC43_RS08285 PF00171 Aldehyde dehydrogenase family AUC43_RS08295 PF08281 Sigma-70, region 4 AUC43_RS08295 PF04542 Sigma-70 region 2 AUC43_RS08320 PF01425 Amidase AUC43_RS08340 PF01042 Endoribonuclease L-PSP AUC43_RS08345 PF01062 Bestrophin, RFP-TM, chloride channel AUC43_RS08350 PF01266 FAD dependent oxidoreductase AUC43_RS08355 PF03575 Peptidase family S51 AUC43_RS08360 PF00128 Alpha amylase, catalytic domain AUC43_RS08365 PF12805 FUSC-like inner membrane protein yccS AUC43_RS08370 PF13492 GAF domain AUC43_RS08370 PF13185 GAF domain AUC43_RS08370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AUC43_RS08370 PF07730 Histidine kinase AUC43_RS08375 PF00082 Subtilase family AUC43_RS08415 PF16870 2-oxoglutarate dehydrogenase C-terminal AUC43_RS08415 PF16078 2-oxoglutarate dehydrogenase N-terminus AUC43_RS08415 PF02779 Transketolase, pyrimidine binding domain AUC43_RS08415 PF00676 Dehydrogenase E1 component AUC43_RS08430 PF00364 Biotin-requiring enzyme AUC43_RS08430 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AUC43_RS08430 PF02817 e3 binding domain AUC43_RS08445 PF00892 EamA-like transporter family AUC43_RS08460 PF00909 Ammonium Transporter Family AUC43_RS08475 PF07992 Pyridine nucleotide-disulphide oxidoreductase AUC43_RS08475 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AUC43_RS08500 PF05656 Protein of unknown function (DUF805) AUC43_RS08520 PF00313 'Cold-shock' DNA-binding domain AUC43_RS08525 PF05971 RNA methyltransferase AUC43_RS08535 PF01479 S4 domain AUC43_RS08535 PF00849 RNA pseudouridylate synthase AUC43_RS08560 PF00171 Aldehyde dehydrogenase family AUC43_RS08580 PF00732 GMC oxidoreductase AUC43_RS08580 PF05199 GMC oxidoreductase AUC43_RS08595 PF01384 Phosphate transporter family AUC43_RS08615 PF00072 Response regulator receiver domain AUC43_RS08615 PF04397 LytTr DNA-binding domain AUC43_RS08625 PF01965 DJ-1/PfpI family AUC43_RS08650 PF00326 Prolyl oligopeptidase family AUC43_RS08670 PF00850 Histone deacetylase domain AUC43_RS08680 PF00195 Chalcone and stilbene synthases, N-terminal domain AUC43_RS08680 PF02797 Chalcone and stilbene synthases, C-terminal domain AUC43_RS08700 PF17149 Periplasmic sensor domain found in signal transduction proteins AUC43_RS08700 PF00512 His Kinase A (phospho-acceptor) domain AUC43_RS08700 PF01627 Hpt domain AUC43_RS08700 PF00072 Response regulator receiver domain AUC43_RS08700 PF00672 HAMP domain AUC43_RS08700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AUC43_RS08705 PF02954 Bacterial regulatory protein, Fis family AUC43_RS08705 PF00072 Response regulator receiver domain AUC43_RS08705 PF00158 Sigma-54 interaction domain AUC43_RS08715 PF01223 DNA/RNA non-specific endonuclease AUC43_RS08720 PF01180 Dihydroorotate dehydrogenase AUC43_RS08725 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AUC43_RS08730 PF00156 Phosphoribosyl transferase domain AUC43_RS08735 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain AUC43_RS08735 PF02769 AIR synthase related protein, C-terminal domain AUC43_RS08735 PF00586 AIR synthase related protein, N-terminal domain AUC43_RS08745 PF01259 SAICAR synthetase AUC43_RS08755 PF02844 Phosphoribosylglycinamide synthetase, N domain AUC43_RS08755 PF02843 Phosphoribosylglycinamide synthetase, C domain AUC43_RS08755 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AUC43_RS08760 PF00551 Formyl transferase AUC43_RS08765 PF00156 Phosphoribosyl transferase domain AUC43_RS08770 PF00586 AIR synthase related protein, N-terminal domain AUC43_RS08770 PF02769 AIR synthase related protein, C-terminal domain AUC43_RS08780 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain AUC43_RS08780 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain AUC43_RS08780 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family AUC43_RS08790 PF00196 Bacterial regulatory proteins, luxR family AUC43_RS08790 PF00072 Response regulator receiver domain AUC43_RS08795 PF00072 Response regulator receiver domain AUC43_RS08795 PF00196 Bacterial regulatory proteins, luxR family AUC43_RS08815 PF08281 Sigma-70, region 4 AUC43_RS08815 PF04542 Sigma-70 region 2 AUC43_RS08825 PF00111 2Fe-2S iron-sulfur cluster binding domain AUC43_RS08830 PF07992 Pyridine nucleotide-disulphide oxidoreductase AUC43_RS08880 PF00248 Aldo/keto reductase family AUC43_RS08885 PF01116 Fructose-bisphosphate aldolase class-II AUC43_RS08900 PF06745 KaiC AUC43_RS08905 PF07689 KaiB domain AUC43_RS08910 PF07689 KaiB domain AUC43_RS08915 PF00989 PAS fold AUC43_RS08915 PF00512 His Kinase A (phospho-acceptor) domain AUC43_RS08915 PF00672 HAMP domain AUC43_RS08915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AUC43_RS08920 PF00072 Response regulator receiver domain AUC43_RS08925 PF03466 LysR substrate binding domain AUC43_RS08925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AUC43_RS08930 PF03601 Conserved hypothetical protein 698 AUC43_RS08950 PF00072 Response regulator receiver domain AUC43_RS08950 PF00196 Bacterial regulatory proteins, luxR family AUC43_RS08960 PF00232 Glycosyl hydrolase family 1 AUC43_RS08965 PF00732 GMC oxidoreductase AUC43_RS08965 PF05199 GMC oxidoreductase AUC43_RS08980 PF00561 alpha/beta hydrolase fold AUC43_RS08985 PF00180 Isocitrate/isopropylmalate dehydrogenase AUC43_RS09015 PF05985 Ethanolamine ammonia-lyase light chain (EutC) AUC43_RS09020 PF06751 Ethanolamine ammonia lyase large subunit (EutB) AUC43_RS09025 PF01301 Glycosyl hydrolases family 35 AUC43_RS09030 PF13426 PAS domain AUC43_RS09030 PF00072 Response regulator receiver domain AUC43_RS09030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AUC43_RS09040 PF03458 UPF0126 domain AUC43_RS09050 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AUC43_RS09055 PF01738 Dienelactone hydrolase family AUC43_RS09070 PF00171 Aldehyde dehydrogenase family AUC43_RS09070 PF01575 MaoC like domain AUC43_RS09085 PF13538 UvrD-like helicase C-terminal domain AUC43_RS09105 PF13188 PAS domain AUC43_RS09105 PF13426 PAS domain AUC43_RS09105 PF00989 PAS fold AUC43_RS09105 PF00512 His Kinase A (phospho-acceptor) domain AUC43_RS09105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AUC43_RS09110 PF00144 Beta-lactamase AUC43_RS09110 PF11954 Domain of unknown function (DUF3471) AUC43_RS09140 PF00296 Luciferase-like monooxygenase AUC43_RS09160 PF04235 Protein of unknown function (DUF418) AUC43_RS09190 PF02225 PA domain AUC43_RS09190 PF04389 Peptidase family M28 AUC43_RS09210 PF00512 His Kinase A (phospho-acceptor) domain AUC43_RS09210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AUC43_RS09210 PF08448 PAS fold AUC43_RS09210 PF13188 PAS domain AUC43_RS09210 PF00072 Response regulator receiver domain AUC43_RS09240 PF00665 Integrase core domain AUC43_RS09240 PF13276 HTH-like domain AUC43_RS09240 PF13333 Integrase core domain AUC43_RS09250 PF07470 Glycosyl Hydrolase Family 88 AUC43_RS09260 PF05336 L-rhamnose mutarotase AUC43_RS09265 PF00295 Glycosyl hydrolases family 28 AUC43_RS09300 PF07980 SusD family AUC43_RS09305 PF00593 TonB dependent receptor AUC43_RS09305 PF07715 TonB-dependent Receptor Plug Domain AUC43_RS09310 PF02424 ApbE family AUC43_RS09315 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AUC43_RS09315 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AUC43_RS09325 PF02589 LUD domain AUC43_RS09330 PF02589 LUD domain AUC43_RS09330 PF11870 Domain of unknown function (DUF3390) AUC43_RS09330 PF13183 4Fe-4S dicluster domain AUC43_RS09335 PF02754 Cysteine-rich domain AUC43_RS09345 PF01261 Xylose isomerase-like TIM barrel AUC43_RS09355 PF00596 Class II Aldolase and Adducin N-terminal domain AUC43_RS09360 PF06379 L-rhamnose-proton symport protein (RhaT) AUC43_RS09365 PF00593 TonB dependent receptor AUC43_RS09365 PF07715 TonB-dependent Receptor Plug Domain AUC43_RS09370 PF14322 Starch-binding associating with outer membrane AUC43_RS09370 PF07980 SusD family AUC43_RS09375 PF18370 Rhamnogalacturonan I lyases beta-sheet domain AUC43_RS09380 PF00657 GDSL-like Lipase/Acylhydrolase AUC43_RS09385 PF13472 GDSL-like Lipase/Acylhydrolase family AUC43_RS09390 PF18370 Rhamnogalacturonan I lyases beta-sheet domain AUC43_RS09395 PF02837 Glycosyl hydrolases family 2, sugar binding domain AUC43_RS09395 PF02929 Beta galactosidase small chain AUC43_RS09395 PF16353 Domain of unknown function(DUF4981) AUC43_RS09395 PF00703 Glycosyl hydrolases family 2 AUC43_RS09395 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AUC43_RS09410 PF13472 GDSL-like Lipase/Acylhydrolase family AUC43_RS09420 PF07715 TonB-dependent Receptor Plug Domain AUC43_RS09420 PF00593 TonB dependent receptor AUC43_RS09425 PF07980 SusD family AUC43_RS09425 PF14322 Starch-binding associating with outer membrane AUC43_RS09430 PF16355 Domain of unknown function (DUF4982) AUC43_RS09430 PF00703 Glycosyl hydrolases family 2 AUC43_RS09430 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AUC43_RS09430 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 AUC43_RS09430 PF02837 Glycosyl hydrolases family 2, sugar binding domain AUC43_RS09445 PF16153 Domain of unknown function (DUF4861) AUC43_RS09450 PF04962 KduI/IolB family AUC43_RS09465 PF07470 Glycosyl Hydrolase Family 88 AUC43_RS09470 PF07495 Y_Y_Y domain AUC43_RS09470 PF00072 Response regulator receiver domain AUC43_RS09470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AUC43_RS09470 PF07494 Two component regulator propeller AUC43_RS09470 PF12833 Helix-turn-helix domain AUC43_RS09470 PF00512 His Kinase A (phospho-acceptor) domain AUC43_RS09475 PF01301 Glycosyl hydrolases family 35 AUC43_RS09485 PF07715 TonB-dependent Receptor Plug Domain AUC43_RS09485 PF00593 TonB dependent receptor AUC43_RS09505 PF16353 Domain of unknown function(DUF4981) AUC43_RS09505 PF00703 Glycosyl hydrolases family 2 AUC43_RS09505 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AUC43_RS09505 PF02929 Beta galactosidase small chain AUC43_RS09505 PF02837 Glycosyl hydrolases family 2, sugar binding domain AUC43_RS09520 PF12161 HsdM N-terminal domain AUC43_RS09520 PF02384 N-6 DNA Methylase AUC43_RS09525 PF17149 Periplasmic sensor domain found in signal transduction proteins AUC43_RS09525 PF00072 Response regulator receiver domain AUC43_RS09525 PF00512 His Kinase A (phospho-acceptor) domain AUC43_RS09525 PF00672 HAMP domain AUC43_RS09525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AUC43_RS09525 PF01627 Hpt domain AUC43_RS09560 PF12161 HsdM N-terminal domain AUC43_RS09560 PF02384 N-6 DNA Methylase AUC43_RS09570 PF01420 Type I restriction modification DNA specificity domain AUC43_RS09575 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) AUC43_RS09575 PF04851 Type III restriction enzyme, res subunit AUC43_RS09575 PF00271 Helicase conserved C-terminal domain AUC43_RS09575 PF08463 EcoEI R protein C-terminal AUC43_RS09595 PF01053 Cys/Met metabolism PLP-dependent enzyme AUC43_RS09615 PF00593 TonB dependent receptor AUC43_RS09615 PF07715 TonB-dependent Receptor Plug Domain AUC43_RS09620 PF00593 TonB dependent receptor AUC43_RS09620 PF07715 TonB-dependent Receptor Plug Domain AUC43_RS09630 PF01791 DeoC/LacD family aldolase AUC43_RS09635 PF17848 Acetyl-coA carboxylase zinc finger domain AUC43_RS09635 PF01039 Carboxyl transferase domain AUC43_RS09640 PF00691 OmpA family AUC43_RS09640 PF13488 Glycine zipper AUC43_RS09650 PF13488 Glycine zipper AUC43_RS09650 PF00691 OmpA family AUC43_RS09655 PF00730 HhH-GPD superfamily base excision DNA repair protein AUC43_RS09655 PF00633 Helix-hairpin-helix motif AUC43_RS09655 PF10576 Iron-sulfur binding domain of endonuclease III AUC43_RS09660 PF04055 Radical SAM superfamily AUC43_RS09660 PF13186 Iron-sulfur cluster-binding domain AUC43_RS09665 PF00132 Bacterial transferase hexapeptide (six repeats) AUC43_RS09675 PF00571 CBS domain AUC43_RS09675 PF01595 Cyclin M transmembrane N-terminal domain AUC43_RS09675 PF03471 Transporter associated domain AUC43_RS09685 PF01037 Lrp/AsnC ligand binding domain AUC43_RS09695 PF05193 Peptidase M16 inactive domain AUC43_RS09695 PF00675 Insulinase (Peptidase family M16) AUC43_RS09705 PF01596 O-methyltransferase AUC43_RS09720 PF07733 Bacterial DNA polymerase III alpha NTPase domain AUC43_RS09720 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AUC43_RS09720 PF14579 Helix-hairpin-helix motif AUC43_RS09720 PF01336 OB-fold nucleic acid binding domain AUC43_RS09720 PF02811 PHP domain AUC43_RS09725 PF00085 Thioredoxin AUC43_RS09740 PF05195 Aminopeptidase P, N-terminal domain AUC43_RS09740 PF00557 Metallopeptidase family M24 AUC43_RS09785 PF02811 PHP domain AUC43_RS09785 PF14716 Helix-hairpin-helix domain AUC43_RS09785 PF14791 DNA polymerase beta thumb AUC43_RS09790 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AUC43_RS09795 PF10905 Protein of unknown function (DUF2695) AUC43_RS09800 PF02403 Seryl-tRNA synthetase N-terminal domain AUC43_RS09800 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AUC43_RS09805 PF07497 Rho termination factor, RNA-binding domain AUC43_RS09805 PF07498 Rho termination factor, N-terminal domain AUC43_RS09805 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AUC43_RS09855 PF00905 Penicillin binding protein transpeptidase domain AUC43_RS09855 PF00912 Transglycosylase AUC43_RS09870 PF01227 GTP cyclohydrolase I AUC43_RS09890 PF01245 Ribosomal protein L19 AUC43_RS09895 PF01746 tRNA (Guanine-1)-methyltransferase AUC43_RS09900 PF05239 PRC-barrel domain AUC43_RS09900 PF01782 RimM N-terminal domain AUC43_RS09905 PF00886 Ribosomal protein S16 AUC43_RS09915 PF00849 RNA pseudouridylate synthase AUC43_RS09920 PF06123 Inner membrane protein CreD AUC43_RS09925 PF02548 Ketopantoate hydroxymethyltransferase AUC43_RS09940 PF11741 AMIN domain AUC43_RS09940 PF01520 N-acetylmuramoyl-L-alanine amidase AUC43_RS09950 PF01039 Carboxyl transferase domain AUC43_RS09970 PF00205 Thiamine pyrophosphate enzyme, central domain AUC43_RS09970 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AUC43_RS09970 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AUC43_RS09995 PF05103 DivIVA protein AUC43_RS10000 PF02152 Dihydroneopterin aldolase AUC43_RS10020 PF00082 Subtilase family AUC43_RS10070 PF17820 PDZ domain AUC43_RS10070 PF02163 Peptidase family M50 AUC43_RS10075 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain AUC43_RS10075 PF13288 DXP reductoisomerase C-terminal domain AUC43_RS10075 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase AUC43_RS10085 PF01494 FAD binding domain AUC43_RS10095 PF07992 Pyridine nucleotide-disulphide oxidoreductase AUC43_RS10095 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AUC43_RS10100 PF01493 GXGXG motif AUC43_RS10100 PF04898 Glutamate synthase central domain AUC43_RS10100 PF00310 Glutamine amidotransferases class-II AUC43_RS10100 PF01645 Conserved region in glutamate synthase AUC43_RS10110 PF01063 Amino-transferase class IV AUC43_RS10115 PF00920 Dehydratase family AUC43_RS10120 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AUC43_RS10120 PF00205 Thiamine pyrophosphate enzyme, central domain AUC43_RS10120 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AUC43_RS10125 PF10369 Small subunit of acetolactate synthase AUC43_RS10125 PF01842 ACT domain AUC43_RS10130 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain AUC43_RS10130 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AUC43_RS10135 PF00291 Pyridoxal-phosphate dependent enzyme AUC43_RS10135 PF00585 C-terminal regulatory domain of Threonine dehydratase AUC43_RS10140 PF00682 HMGL-like AUC43_RS10140 PF08502 LeuA allosteric (dimerisation) domain AUC43_RS10145 PF00330 Aconitase family (aconitate hydratase) AUC43_RS10150 PF00694 Aconitase C-terminal domain AUC43_RS10155 PF00180 Isocitrate/isopropylmalate dehydrogenase AUC43_RS10160 PF03590 Aspartate-ammonia ligase AUC43_RS10180 PF00106 short chain dehydrogenase AUC43_RS10190 PF01642 Methylmalonyl-CoA mutase AUC43_RS10190 PF02310 B12 binding domain AUC43_RS10195 PF02310 B12 binding domain AUC43_RS10195 PF01642 Methylmalonyl-CoA mutase AUC43_RS10205 PF00149 Calcineurin-like phosphoesterase AUC43_RS10205 PF02872 5'-nucleotidase, C-terminal domain AUC43_RS10210 PF00308 Bacterial dnaA protein AUC43_RS10210 PF08299 Bacterial dnaA protein helix-turn-helix AUC43_RS10210 PF11638 DnaA N-terminal domain AUC43_RS10220 PF02566 OsmC-like protein AUC43_RS10240 PF12706 Beta-lactamase superfamily domain AUC43_RS10245 PF00691 OmpA family AUC43_RS10245 PF05736 OprF membrane domain AUC43_RS10250 PF05362 Lon protease (S16) C-terminal proteolytic domain AUC43_RS10250 PF00004 ATPase family associated with various cellular activities (AAA) AUC43_RS10250 PF02190 ATP-dependent protease La (LON) substrate-binding domain AUC43_RS10260 PF00004 ATPase family associated with various cellular activities (AAA) AUC43_RS10260 PF07724 AAA domain (Cdc48 subfamily) AUC43_RS10260 PF10431 C-terminal, D2-small domain, of ClpB protein AUC43_RS10265 PF14322 Starch-binding associating with outer membrane AUC43_RS10265 PF07980 SusD family AUC43_RS10270 PF07715 TonB-dependent Receptor Plug Domain AUC43_RS10270 PF00593 TonB dependent receptor AUC43_RS10285 PF07715 TonB-dependent Receptor Plug Domain AUC43_RS10285 PF00593 TonB dependent receptor AUC43_RS10300 PF07715 TonB-dependent Receptor Plug Domain AUC43_RS10300 PF00593 TonB dependent receptor AUC43_RS10305 PF00593 TonB dependent receptor AUC43_RS10305 PF07715 TonB-dependent Receptor Plug Domain AUC43_RS10315 PF03462 PCRF domain AUC43_RS10315 PF00472 RF-1 domain AUC43_RS10325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AUC43_RS10325 PF08446 PAS fold AUC43_RS10325 PF00360 Phytochrome region AUC43_RS10325 PF01590 GAF domain AUC43_RS10325 PF00512 His Kinase A (phospho-acceptor) domain AUC43_RS10330 PF00072 Response regulator receiver domain AUC43_RS10335 PF01351 Ribonuclease HII AUC43_RS10355 PF02686 Glu-tRNAGln amidotransferase C subunit AUC43_RS10365 PF00005 ABC transporter AUC43_RS10370 PF01923 Cobalamin adenosyltransferase AUC43_RS10375 PF01063 Amino-transferase class IV AUC43_RS10380 PF08669 Glycine cleavage T-protein C-terminal barrel domain AUC43_RS10380 PF01571 Aminomethyltransferase folate-binding domain AUC43_RS10385 PF04029 2-phosphosulpholactate phosphatase AUC43_RS10395 PF02580 D-Tyr-tRNA(Tyr) deacylase AUC43_RS10415 PF00570 HRDC domain AUC43_RS10415 PF01612 3'-5' exonuclease AUC43_RS10420 PF00593 TonB dependent receptor AUC43_RS10420 PF07715 TonB-dependent Receptor Plug Domain AUC43_RS10450 PF02547 Queuosine biosynthesis protein AUC43_RS10455 PF08241 Methyltransferase domain AUC43_RS10465 PF00271 Helicase conserved C-terminal domain AUC43_RS10465 PF18074 Primosomal protein N C-terminal domain AUC43_RS10465 PF18319 PriA DNA helicase Cys-rich region (CRR) domain AUC43_RS10465 PF04851 Type III restriction enzyme, res subunit AUC43_RS10465 PF17764 3′ DNA-binding domain (3′BD) AUC43_RS10470 PF03190 Protein of unknown function, DUF255 AUC43_RS10480 PF01281 Ribosomal protein L9, N-terminal domain AUC43_RS10480 PF03948 Ribosomal protein L9, C-terminal domain AUC43_RS10485 PF01084 Ribosomal protein S18 AUC43_RS10490 PF01250 Ribosomal protein S6 AUC43_RS10500 PF13247 4Fe-4S dicluster domain AUC43_RS10500 PF00037 4Fe-4S binding domain AUC43_RS10525 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AUC43_RS10530 PF00115 Cytochrome C and Quinol oxidase polypeptide I AUC43_RS10540 PF01040 UbiA prenyltransferase family AUC43_RS10545 PF00510 Cytochrome c oxidase subunit III AUC43_RS10550 PF00510 Cytochrome c oxidase subunit III AUC43_RS10565 PF04238 Protein of unknown function (DUF420) AUC43_RS10580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AUC43_RS10580 PF00672 HAMP domain AUC43_RS10580 PF00989 PAS fold AUC43_RS10580 PF00512 His Kinase A (phospho-acceptor) domain AUC43_RS10595 PF14579 Helix-hairpin-helix motif AUC43_RS10595 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AUC43_RS10595 PF07733 Bacterial DNA polymerase III alpha NTPase domain AUC43_RS10595 PF02811 PHP domain AUC43_RS10595 PF00929 Exonuclease AUC43_RS10595 PF11490 DNA polymerase III polC-type N-terminus II AUC43_RS10605 PF07691 PA14 domain AUC43_RS10605 PF02838 Glycosyl hydrolase family 20, domain 2 AUC43_RS10605 PF00728 Glycosyl hydrolase family 20, catalytic domain AUC43_RS10615 PF17863 AAA lid domain AUC43_RS10615 PF07726 ATPase family associated with various cellular activities (AAA) AUC43_RS10645 PF00351 Biopterin-dependent aromatic amino acid hydroxylase AUC43_RS10665 PF07715 TonB-dependent Receptor Plug Domain AUC43_RS10665 PF00593 TonB dependent receptor AUC43_RS10675 PF00106 short chain dehydrogenase AUC43_RS10685 PF00795 Carbon-nitrogen hydrolase AUC43_RS10685 PF00583 Acetyltransferase (GNAT) family AUC43_RS10690 PF01144 Coenzyme A transferase AUC43_RS10695 PF00144 Beta-lactamase AUC43_RS10700 PF01144 Coenzyme A transferase AUC43_RS10710 PF01687 Riboflavin kinase AUC43_RS10710 PF06574 FAD synthetase AUC43_RS10715 PF16198 tRNA pseudouridylate synthase B C-terminal domain AUC43_RS10715 PF01509 TruB family pseudouridylate synthase (N terminal domain) AUC43_RS10720 PF02673 Bacitracin resistance protein BacA AUC43_RS10730 PF18075 FtsX extracellular domain AUC43_RS10740 PF00814 Glycoprotease family AUC43_RS10745 PF01668 SmpB protein AUC43_RS10750 PF00877 NlpC/P60 family AUC43_RS10760 PF00487 Fatty acid desaturase AUC43_RS10765 PF00561 alpha/beta hydrolase fold AUC43_RS10770 PF00575 S1 RNA binding domain AUC43_RS10780 PF08245 Mur ligase middle domain AUC43_RS10780 PF02875 Mur ligase family, glutamate ligase domain AUC43_RS10780 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AUC43_RS10795 PF00793 DAHP synthetase I family AUC43_RS10810 PF04379 ApaG domain AUC43_RS10815 PF03167 Uracil DNA glycosylase superfamily AUC43_RS10820 PF10502 Signal peptidase, peptidase S26 AUC43_RS10825 PF05173 Dihydrodipicolinate reductase, C-terminus AUC43_RS10825 PF01113 Dihydrodipicolinate reductase, N-terminus AUC43_RS10835 PF02195 ParB-like nuclease domain AUC43_RS10835 PF17762 HTH domain found in ParB protein AUC43_RS10850 PF13614 AAA domain AUC43_RS10855 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AUC43_RS10870 PF14849 YidC periplasmic domain AUC43_RS10870 PF02096 60Kd inner membrane protein AUC43_RS10875 PF00117 Glutamine amidotransferase class-I AUC43_RS10875 PF06418 CTP synthase N-terminus AUC43_RS10880 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family AUC43_RS10895 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AUC43_RS10895 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AUC43_RS10895 PF01842 ACT domain AUC43_RS10905 PF12146 Serine aminopeptidase, S33 AUC43_RS10935 PF00248 Aldo/keto reductase family AUC43_RS10940 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AUC43_RS10945 PF00128 Alpha amylase, catalytic domain AUC43_RS10945 PF02903 Alpha amylase, N-terminal ig-like domain AUC43_RS10945 PF00686 Starch binding domain AUC43_RS10955 PF01569 PAP2 superfamily AUC43_RS10970 PF01432 Peptidase family M3 AUC43_RS10990 PF02806 Alpha amylase, C-terminal all-beta domain AUC43_RS10990 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AUC43_RS10990 PF00128 Alpha amylase, catalytic domain AUC43_RS11010 PF00141 Peroxidase AUC43_RS11015 PF00989 PAS fold AUC43_RS11015 PF00512 His Kinase A (phospho-acceptor) domain AUC43_RS11015 PF13188 PAS domain AUC43_RS11015 PF13426 PAS domain AUC43_RS11015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AUC43_RS11020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AUC43_RS11020 PF00512 His Kinase A (phospho-acceptor) domain AUC43_RS11025 PF00128 Alpha amylase, catalytic domain AUC43_RS11025 PF10438 Cyclo-malto-dextrinase C-terminal domain AUC43_RS11025 PF09087 Cyclomaltodextrinase, N-terminal AUC43_RS11040 PF01055 Glycosyl hydrolases family 31 AUC43_RS11040 PF16338 Domain of unknown function (DUF4968) AUC43_RS11040 PF13802 Galactose mutarotase-like AUC43_RS11040 PF17137 Domain of unknown function (DUF5110) AUC43_RS11070 PF04134 Protein of unknown function, DUF393 AUC43_RS11105 PF00561 alpha/beta hydrolase fold AUC43_RS11110 PF00561 alpha/beta hydrolase fold AUC43_RS11115 PF01483 Proprotein convertase P-domain AUC43_RS11115 PF04389 Peptidase family M28 AUC43_RS11120 PF00326 Prolyl oligopeptidase family AUC43_RS11120 PF07676 WD40-like Beta Propeller Repeat AUC43_RS11125 PF00854 POT family AUC43_RS11145 PF07969 Amidohydrolase family AUC43_RS11150 PF00144 Beta-lactamase AUC43_RS11175 PF00512 His Kinase A (phospho-acceptor) domain AUC43_RS11175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AUC43_RS11180 PF00072 Response regulator receiver domain AUC43_RS11180 PF00486 Transcriptional regulatory protein, C terminal AUC43_RS11200 PF01915 Glycosyl hydrolase family 3 C-terminal domain AUC43_RS11200 PF00933 Glycosyl hydrolase family 3 N terminal domain AUC43_RS11205 PF00501 AMP-binding enzyme AUC43_RS11205 PF13193 AMP-binding enzyme C-terminal domain AUC43_RS11210 PF03807 NADP oxidoreductase coenzyme F420-dependent AUC43_RS11210 PF14748 Pyrroline-5-carboxylate reductase dimerisation AUC43_RS11225 PF00593 TonB dependent receptor AUC43_RS11225 PF07715 TonB-dependent Receptor Plug Domain AUC43_RS11235 PF03702 Anhydro-N-acetylmuramic acid kinase AUC43_RS11240 PF02585 GlcNAc-PI de-N-acetylase AUC43_RS11240 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase AUC43_RS11245 PF07715 TonB-dependent Receptor Plug Domain AUC43_RS11245 PF00593 TonB dependent receptor AUC43_RS11260 PF01204 Trehalase AUC43_RS11265 PF02638 Glycosyl hydrolase-like 10 AUC43_RS11280 PF01694 Rhomboid family AUC43_RS11285 PF00107 Zinc-binding dehydrogenase AUC43_RS11285 PF08240 Alcohol dehydrogenase GroES-like domain AUC43_RS11300 PF01370 NAD dependent epimerase/dehydratase family AUC43_RS11310 PF01032 FecCD transport family AUC43_RS11320 PF02684 Lipid-A-disaccharide synthetase AUC43_RS11330 PF07724 AAA domain (Cdc48 subfamily) AUC43_RS11330 PF10431 C-terminal, D2-small domain, of ClpB protein AUC43_RS11330 PF06689 ClpX C4-type zinc finger AUC43_RS11340 PF00574 Clp protease AUC43_RS11345 PF05698 Bacterial trigger factor protein (TF) C-terminus AUC43_RS11345 PF05697 Bacterial trigger factor protein (TF) AUC43_RS11355 PF04607 Region found in RelA / SpoT proteins AUC43_RS11355 PF02824 TGS domain AUC43_RS11355 PF13291 ACT domain AUC43_RS11365 PF01475 Ferric uptake regulator family AUC43_RS11370 PF01740 STAS domain AUC43_RS11375 PF00709 Adenylosuccinate synthetase AUC43_RS11425 PF00535 Glycosyl transferase family 2 AUC43_RS11440 PF08328 Adenylosuccinate lyase C-terminal AUC43_RS11440 PF00206 Lyase AUC43_RS11445 PF00912 Transglycosylase AUC43_RS11450 PF03741 Integral membrane protein TerC family AUC43_RS11455 PF00535 Glycosyl transferase family 2 AUC43_RS11470 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AUC43_RS11470 PF17944 Arginine decarboxylase C-terminal helical extension AUC43_RS11470 PF17810 Arginine decarboxylase helical bundle domain AUC43_RS11475 PF00491 Arginase family AUC43_RS11495 PF00750 tRNA synthetases class I (R) AUC43_RS11495 PF03485 Arginyl tRNA synthetase N terminal domain AUC43_RS11495 PF05746 DALR anticodon binding domain AUC43_RS11500 PF03641 Possible lysine decarboxylase AUC43_RS11505 PF00255 Glutathione peroxidase AUC43_RS11510 PF01040 UbiA prenyltransferase family AUC43_RS11515 PF00271 Helicase conserved C-terminal domain AUC43_RS11515 PF00270 DEAD/DEAH box helicase AUC43_RS11530 PF00005 ABC transporter AUC43_RS11535 PF02515 CoA-transferase family III AUC43_RS11545 PF00579 tRNA synthetases class I (W and Y) AUC43_RS11560 PF12706 Beta-lactamase superfamily domain AUC43_RS11580 PF01996 F420-0:Gamma-glutamyl ligase AUC43_RS11580 PF00881 Nitroreductase family AUC43_RS11590 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) AUC43_RS11590 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 AUC43_RS11595 PF00128 Alpha amylase, catalytic domain AUC43_RS11595 PF02806 Alpha amylase, C-terminal all-beta domain AUC43_RS11595 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AUC43_RS11605 PF03606 C4-dicarboxylate anaerobic carrier AUC43_RS11635 PF01979 Amidohydrolase family AUC43_RS11655 PF02567 Phenazine biosynthesis-like protein AUC43_RS11660 PF02075 Crossover junction endodeoxyribonuclease RuvC AUC43_RS11670 PF00535 Glycosyl transferase family 2 AUC43_RS11685 PF00528 Binding-protein-dependent transport system inner membrane component AUC43_RS11685 PF12911 N-terminal TM domain of oligopeptide transport permease C AUC43_RS11715 PF00403 Heavy-metal-associated domain AUC43_RS11735 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AUC43_RS11740 PF01738 Dienelactone hydrolase family AUC43_RS11775 PF01522 Polysaccharide deacetylase AUC43_RS11795 PF01026 TatD related DNase AUC43_RS11810 PF07715 TonB-dependent Receptor Plug Domain AUC43_RS11810 PF00593 TonB dependent receptor AUC43_RS11825 PF06580 Histidine kinase AUC43_RS11825 PF13492 GAF domain AUC43_RS11825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AUC43_RS11825 PF07694 5TMR of 5TMR-LYT AUC43_RS11830 PF04397 LytTr DNA-binding domain AUC43_RS11830 PF00072 Response regulator receiver domain AUC43_RS11835 PF04397 LytTr DNA-binding domain AUC43_RS11835 PF00072 Response regulator receiver domain AUC43_RS11840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AUC43_RS11840 PF06580 Histidine kinase AUC43_RS11840 PF13492 GAF domain AUC43_RS11840 PF07694 5TMR of 5TMR-LYT AUC43_RS11865 PF13193 AMP-binding enzyme C-terminal domain AUC43_RS11865 PF00501 AMP-binding enzyme AUC43_RS11885 PF00378 Enoyl-CoA hydratase/isomerase AUC43_RS11890 PF16582 Middle domain of thiamine pyrophosphate AUC43_RS11890 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AUC43_RS11895 PF05343 M42 glutamyl aminopeptidase AUC43_RS11900 PF00425 chorismate binding enzyme AUC43_RS11905 PF03061 Thioesterase superfamily AUC43_RS11910 PF00300 Histidine phosphatase superfamily (branch 1) AUC43_RS11915 PF00364 Biotin-requiring enzyme AUC43_RS11915 PF02817 e3 binding domain AUC43_RS11915 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AUC43_RS11920 PF00227 Proteasome subunit AUC43_RS11930 PF08000 Bacterial PH domain AUC43_RS11960 PF01926 50S ribosome-binding GTPase AUC43_RS11960 PF06071 Protein of unknown function (DUF933) AUC43_RS11995 PF00005 ABC transporter AUC43_RS11995 PF12848 ABC transporter AUC43_RS12015 PF00730 HhH-GPD superfamily base excision DNA repair protein AUC43_RS12020 PF00149 Calcineurin-like phosphoesterase AUC43_RS12025 PF00999 Sodium/hydrogen exchanger family AUC43_RS12030 PF01212 Beta-eliminating lyase AUC43_RS12040 PF12850 Calcineurin-like phosphoesterase superfamily domain AUC43_RS12045 PF01467 Cytidylyltransferase-like AUC43_RS12045 PF00293 NUDIX domain AUC43_RS12055 PF01467 Cytidylyltransferase-like AUC43_RS12065 PF00293 NUDIX domain AUC43_RS12080 PF13538 UvrD-like helicase C-terminal domain AUC43_RS12090 PF04241 Protein of unknown function (DUF423) AUC43_RS12110 PF12867 DinB superfamily AUC43_RS12110 PF03781 Sulfatase-modifying factor enzyme 1 AUC43_RS12115 PF10017 Histidine-specific methyltransferase, SAM-dependent AUC43_RS12120 PF00155 Aminotransferase class I and II AUC43_RS12125 PF01554 MatE AUC43_RS12135 PF01588 Putative tRNA binding domain AUC43_RS12145 PF01882 Protein of unknown function DUF58 AUC43_RS12160 PF01168 Alanine racemase, N-terminal domain AUC43_RS12170 PF07859 alpha/beta hydrolase fold AUC43_RS12180 PF03109 ABC1 family AUC43_RS12190 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AUC43_RS12190 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AUC43_RS12190 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AUC43_RS12190 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AUC43_RS12195 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AUC43_RS12220 PF00005 ABC transporter AUC43_RS12220 PF16326 ABC transporter C-terminal domain AUC43_RS12220 PF12848 ABC transporter AUC43_RS12235 PF01979 Amidohydrolase family AUC43_RS12250 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region AUC43_RS12250 PF00326 Prolyl oligopeptidase family AUC43_RS12255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AUC43_RS12255 PF13426 PAS domain AUC43_RS12255 PF00072 Response regulator receiver domain AUC43_RS12270 PF00005 ABC transporter AUC43_RS12275 PF13472 GDSL-like Lipase/Acylhydrolase family AUC43_RS12285 PF01177 Asp/Glu/Hydantoin racemase AUC43_RS12315 PF01882 Protein of unknown function DUF58 AUC43_RS12320 PF17863 AAA lid domain AUC43_RS12320 PF07726 ATPase family associated with various cellular activities (AAA) AUC43_RS12335 PF01523 Putative modulator of DNA gyrase AUC43_RS12355 PF01523 Putative modulator of DNA gyrase AUC43_RS12365 PF01569 PAP2 superfamily AUC43_RS12370 PF02321 Outer membrane efflux protein AUC43_RS12375 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AUC43_RS12380 PF00873 AcrB/AcrD/AcrF family AUC43_RS12385 PF00873 AcrB/AcrD/AcrF family AUC43_RS12415 PF00171 Aldehyde dehydrogenase family AUC43_RS12420 PF00202 Aminotransferase class-III AUC43_RS12425 PF01979 Amidohydrolase family AUC43_RS12430 PF00795 Carbon-nitrogen hydrolase AUC43_RS12435 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AUC43_RS12435 PF07992 Pyridine nucleotide-disulphide oxidoreductase AUC43_RS12440 PF01180 Dihydroorotate dehydrogenase AUC43_RS12450 PF13478 XdhC Rossmann domain AUC43_RS12450 PF02625 XdhC and CoxI family AUC43_RS12460 PF00486 Transcriptional regulatory protein, C terminal AUC43_RS12460 PF00072 Response regulator receiver domain AUC43_RS12465 PF00672 HAMP domain AUC43_RS12465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AUC43_RS12465 PF00512 His Kinase A (phospho-acceptor) domain AUC43_RS12470 PF00916 Sulfate permease family AUC43_RS12470 PF01740 STAS domain AUC43_RS12475 PF00484 Carbonic anhydrase AUC43_RS12480 PF01433 Peptidase family M1 domain AUC43_RS12480 PF11838 ERAP1-like C-terminal domain AUC43_RS12485 PF00593 TonB dependent receptor AUC43_RS12485 PF07715 TonB-dependent Receptor Plug Domain AUC43_RS12490 PF07478 D-ala D-ala ligase C-terminus AUC43_RS12490 PF01820 D-ala D-ala ligase N-terminus AUC43_RS12495 PF00296 Luciferase-like monooxygenase AUC43_RS12500 PF13520 Amino acid permease AUC43_RS12525 PF01751 Toprim domain AUC43_RS12525 PF01131 DNA topoisomerase AUC43_RS12530 PF13460 NAD(P)H-binding AUC43_RS12530 PF11066 Protein of unknown function (DUF2867) AUC43_RS12540 PF01145 SPFH domain / Band 7 family AUC43_RS12545 PF04389 Peptidase family M28 AUC43_RS12545 PF02225 PA domain AUC43_RS12555 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AUC43_RS12555 PF00034 Cytochrome c AUC43_RS12570 PF00248 Aldo/keto reductase family AUC43_RS12590 PF00654 Voltage gated chloride channel AUC43_RS12595 PF14437 MafB19-like deaminase AUC43_RS12615 PF16916 Dimerisation domain of Zinc Transporter AUC43_RS12615 PF01545 Cation efflux family AUC43_RS12625 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AUC43_RS12635 PF00005 ABC transporter AUC43_RS12645 PF00923 Transaldolase/Fructose-6-phosphate aldolase AUC43_RS12655 PF00117 Glutamine amidotransferase class-I AUC43_RS12655 PF02540 NAD synthase AUC43_RS12655 PF00958 GMP synthase C terminal domain AUC43_RS12660 PF00958 GMP synthase C terminal domain AUC43_RS12660 PF00117 Glutamine amidotransferase class-I AUC43_RS12665 PF13286 Phosphohydrolase-associated domain AUC43_RS12665 PF01966 HD domain AUC43_RS12685 PF00202 Aminotransferase class-III AUC43_RS12710 PF00712 DNA polymerase III beta subunit, N-terminal domain AUC43_RS12710 PF02767 DNA polymerase III beta subunit, central domain AUC43_RS12710 PF02768 DNA polymerase III beta subunit, C-terminal domain AUC43_RS12725 PF09822 ABC-type uncharacterized transport system AUC43_RS12735 PF00005 ABC transporter AUC43_RS12740 PF00106 short chain dehydrogenase AUC43_RS12750 PF00106 short chain dehydrogenase AUC43_RS12755 PF02405 Permease MlaE AUC43_RS12760 PF00005 ABC transporter AUC43_RS12765 PF12867 DinB superfamily AUC43_RS12775 PF00766 Electron transfer flavoprotein FAD-binding domain AUC43_RS12775 PF01012 Electron transfer flavoprotein domain AUC43_RS12780 PF01012 Electron transfer flavoprotein domain AUC43_RS12790 PF00691 OmpA family AUC43_RS12805 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AUC43_RS12810 PF00873 AcrB/AcrD/AcrF family AUC43_RS12815 PF13847 Methyltransferase domain AUC43_RS12835 PF08666 SAF domain AUC43_RS12835 PF03102 NeuB family AUC43_RS12845 PF00364 Biotin-requiring enzyme AUC43_RS12845 PF00561 alpha/beta hydrolase fold AUC43_RS12880 PF02348 Cytidylyltransferase AUC43_RS12890 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AUC43_RS12895 PF02719 Polysaccharide biosynthesis protein AUC43_RS12900 PF13180 PDZ domain AUC43_RS12905 PF03062 MBOAT, membrane-bound O-acyltransferase family AUC43_RS12920 PF02978 Signal peptide binding domain AUC43_RS12920 PF00448 SRP54-type protein, GTPase domain AUC43_RS12920 PF02881 SRP54-type protein, helical bundle domain AUC43_RS13025 PF00174 Oxidoreductase molybdopterin binding domain AUC43_RS13055 PF02779 Transketolase, pyrimidine binding domain AUC43_RS13055 PF00364 Biotin-requiring enzyme AUC43_RS13055 PF02780 Transketolase, C-terminal domain AUC43_RS13080 PF02575 YbaB/EbfC DNA-binding family AUC43_RS13090 PF00221 Aromatic amino acid lyase AUC43_RS13095 PF03129 Anticodon binding domain AUC43_RS13095 PF13393 Histidyl-tRNA synthetase AUC43_RS13100 PF07715 TonB-dependent Receptor Plug Domain AUC43_RS13100 PF00593 TonB dependent receptor AUC43_RS13110 PF02803 Thiolase, C-terminal domain AUC43_RS13110 PF00108 Thiolase, N-terminal domain AUC43_RS13120 PF07584 Aerotolerance regulator N-terminal AUC43_RS13120 PF00092 von Willebrand factor type A domain AUC43_RS13145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AUC43_RS13145 PF01751 Toprim domain AUC43_RS13145 PF00204 DNA gyrase B AUC43_RS13145 PF00986 DNA gyrase B subunit, carboxyl terminus AUC43_RS13155 PF02503 Polyphosphate kinase middle domain AUC43_RS13155 PF13089 Polyphosphate kinase N-terminal domain AUC43_RS13155 PF17941 Polyphosphate kinase C-terminal domain 1 AUC43_RS13155 PF13090 Polyphosphate kinase C-terminal domain 2 AUC43_RS13170 PF02146 Sir2 family AUC43_RS13175 PF00551 Formyl transferase AUC43_RS13175 PF01842 ACT domain AUC43_RS13180 PF13368 Topoisomerase C-terminal repeat AUC43_RS13180 PF01751 Toprim domain AUC43_RS13180 PF01131 DNA topoisomerase AUC43_RS13185 PF02743 Cache domain AUC43_RS13185 PF00672 HAMP domain AUC43_RS13185 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AUC43_RS13190 PF01584 CheW-like domain AUC43_RS13195 PF00072 Response regulator receiver domain AUC43_RS13200 PF01627 Hpt domain AUC43_RS13200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AUC43_RS13200 PF02895 Signal transducing histidine kinase, homodimeric domain AUC43_RS13200 PF01584 CheW-like domain AUC43_RS13200 PF07194 P2 response regulator binding domain AUC43_RS13205 PF04509 CheC-like family AUC43_RS13210 PF00491 Arginase family AUC43_RS13215 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV AUC43_RS13220 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AUC43_RS13230 PF00580 UvrD/REP helicase N-terminal domain AUC43_RS13230 PF13361 UvrD-like helicase C-terminal domain AUC43_RS13240 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AUC43_RS13245 PF02469 Fasciclin domain AUC43_RS13250 PF16745 RsgA N-terminal domain AUC43_RS13250 PF03193 RsgA GTPase AUC43_RS13260 PF00578 AhpC/TSA family AUC43_RS13260 PF10417 C-terminal domain of 1-Cys peroxiredoxin AUC43_RS13265 PF00696 Amino acid kinase family AUC43_RS13265 PF01842 ACT domain AUC43_RS13270 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain AUC43_RS13280 PF03544 Gram-negative bacterial TonB protein C-terminal AUC43_RS13285 PF01926 50S ribosome-binding GTPase AUC43_RS13290 PF00691 OmpA family AUC43_RS13295 PF01209 ubiE/COQ5 methyltransferase family AUC43_RS13305 PF00106 short chain dehydrogenase AUC43_RS13315 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AUC43_RS13320 PF03435 Saccharopine dehydrogenase NADP binding domain AUC43_RS13320 PF16653 Saccharopine dehydrogenase C-terminal domain AUC43_RS13325 PF05175 Methyltransferase small domain AUC43_RS13330 PF00075 RNase H AUC43_RS13335 PF00266 Aminotransferase class-V AUC43_RS13340 PF01220 Dehydroquinase class II AUC43_RS13345 PF00589 Phage integrase family AUC43_RS13345 PF02899 Phage integrase, N-terminal SAM-like domain AUC43_RS13375 PF17773 UPF0176 acylphosphatase like domain AUC43_RS13375 PF12368 Rhodanase C-terminal AUC43_RS13375 PF00581 Rhodanese-like domain AUC43_RS13380 PF01048 Phosphorylase superfamily AUC43_RS13395 PF00037 4Fe-4S binding domain AUC43_RS13400 PF10458 Valyl tRNA synthetase tRNA binding arm AUC43_RS13400 PF00133 tRNA synthetases class I (I, L, M and V) AUC43_RS13400 PF08264 Anticodon-binding domain of tRNA AUC43_RS13410 PF02817 e3 binding domain AUC43_RS13410 PF00364 Biotin-requiring enzyme AUC43_RS13410 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AUC43_RS13425 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AUC43_RS13425 PF00289 Biotin carboxylase, N-terminal domain AUC43_RS13425 PF02785 Biotin carboxylase C-terminal domain AUC43_RS13430 PF00364 Biotin-requiring enzyme AUC43_RS13435 PF01132 Elongation factor P (EF-P) OB domain AUC43_RS13435 PF08207 Elongation factor P (EF-P) KOW-like domain AUC43_RS13435 PF09285 Elongation factor P, C-terminal AUC43_RS13440 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AUC43_RS13440 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AUC43_RS13445 PF02504 Fatty acid synthesis protein AUC43_RS13450 PF01783 Ribosomal L32p protein family AUC43_RS13460 PF04166 Pyridoxal phosphate biosynthetic protein PdxA AUC43_RS13465 PF00883 Cytosol aminopeptidase family, catalytic domain AUC43_RS13465 PF02789 Cytosol aminopeptidase family, N-terminal domain AUC43_RS13470 PF00398 Ribosomal RNA adenine dimethylase AUC43_RS13475 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AUC43_RS13475 PF01842 ACT domain AUC43_RS13475 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AUC43_RS13480 PF03449 Transcription elongation factor, N-terminal AUC43_RS13480 PF01272 Transcription elongation factor, GreA/GreB, C-term AUC43_RS13495 PF01223 DNA/RNA non-specific endonuclease AUC43_RS13500 PF02696 Uncharacterized ACR, YdiU/UPF0061 family AUC43_RS13505 PF00248 Aldo/keto reductase family AUC43_RS13515 PF10415 Fumarase C C-terminus AUC43_RS13515 PF00206 Lyase AUC43_RS13535 PF00171 Aldehyde dehydrogenase family AUC43_RS13540 PF04545 Sigma-70, region 4 AUC43_RS13540 PF04542 Sigma-70 region 2 AUC43_RS13580 PF00578 AhpC/TSA family AUC43_RS13585 PF00561 alpha/beta hydrolase fold AUC43_RS13590 PF03060 Nitronate monooxygenase AUC43_RS13595 PF01872 RibD C-terminal domain AUC43_RS13610 PF14759 Reductase C-terminal AUC43_RS13610 PF07992 Pyridine nucleotide-disulphide oxidoreductase AUC43_RS13625 PF00593 TonB dependent receptor AUC43_RS13625 PF07715 TonB-dependent Receptor Plug Domain AUC43_RS13630 PF13520 Amino acid permease AUC43_RS13650 PF01544 CorA-like Mg2+ transporter protein AUC43_RS13655 PF00155 Aminotransferase class I and II AUC43_RS13665 PF01501 Glycosyl transferase family 8 AUC43_RS13665 PF00535 Glycosyl transferase family 2 AUC43_RS13720 PF01975 Survival protein SurE AUC43_RS13730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AUC43_RS13730 PF00512 His Kinase A (phospho-acceptor) domain AUC43_RS13730 PF18719 ArlS sensor domain AUC43_RS13735 PF00072 Response regulator receiver domain AUC43_RS13735 PF00486 Transcriptional regulatory protein, C terminal AUC43_RS13750 PF00082 Subtilase family AUC43_RS13770 PF01653 NAD-dependent DNA ligase adenylation domain AUC43_RS13770 PF00533 BRCA1 C Terminus (BRCT) domain AUC43_RS13770 PF12826 Helix-hairpin-helix motif AUC43_RS13770 PF03119 NAD-dependent DNA ligase C4 zinc finger domain AUC43_RS13770 PF03120 NAD-dependent DNA ligase OB-fold domain AUC43_RS13780 PF00535 Glycosyl transferase family 2 AUC43_RS13780 PF07238 PilZ domain AUC43_RS13790 PF00723 Glycosyl hydrolases family 15 AUC43_RS13795 PF01522 Polysaccharide deacetylase AUC43_RS13800 PF00701 Dihydrodipicolinate synthetase family AUC43_RS13810 PF02754 Cysteine-rich domain AUC43_RS13815 PF00682 HMGL-like AUC43_RS13820 PF01464 Transglycosylase SLT domain AUC43_RS13820 PF01551 Peptidase family M23 AUC43_RS13820 PF10145 Phage-related minor tail protein AUC43_RS13840 PF00510 Cytochrome c oxidase subunit III AUC43_RS13850 PF01433 Peptidase family M1 domain AUC43_RS13850 PF11940 Domain of unknown function (DUF3458) Ig-like fold AUC43_RS13850 PF17432 Domain of unknown function (DUF3458_C) ARM repeats AUC43_RS13865 PF00877 NlpC/P60 family AUC43_RS13875 PF02705 K+ potassium transporter AUC43_RS13885 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AUC43_RS13885 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AUC43_RS13890 PF00849 RNA pseudouridylate synthase AUC43_RS13895 PF07687 Peptidase dimerisation domain AUC43_RS13895 PF01546 Peptidase family M20/M25/M40 AUC43_RS13905 PF05736 OprF membrane domain AUC43_RS13905 PF00691 OmpA family AUC43_RS13910 PF00248 Aldo/keto reductase family AUC43_RS13920 PF00302 Chloramphenicol acetyltransferase AUC43_RS13935 PF02310 B12 binding domain AUC43_RS13935 PF01642 Methylmalonyl-CoA mutase AUC43_RS13940 PF08240 Alcohol dehydrogenase GroES-like domain AUC43_RS13940 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AUC43_RS13945 PF03928 Haem-degrading AUC43_RS13955 PF00009 Elongation factor Tu GTP binding domain AUC43_RS13955 PF03144 Elongation factor Tu domain 2 AUC43_RS13955 PF00679 Elongation factor G C-terminus AUC43_RS13955 PF06421 GTP-binding protein LepA C-terminus AUC43_RS13960 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AUC43_RS13960 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AUC43_RS13965 PF04055 Radical SAM superfamily AUC43_RS13980 PF00285 Citrate synthase, C-terminal domain AUC43_RS13985 PF12631 MnmE helical domain AUC43_RS13985 PF10396 GTP-binding protein TrmE N-terminus AUC43_RS13985 PF01926 50S ribosome-binding GTPase AUC43_RS13995 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AUC43_RS13995 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AUC43_RS14005 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal AUC43_RS14005 PF00132 Bacterial transferase hexapeptide (six repeats) AUC43_RS14005 PF14602 Hexapeptide repeat of succinyl-transferase AUC43_RS14010 PF01112 Asparaginase AUC43_RS14015 PF01625 Peptide methionine sulfoxide reductase AUC43_RS14020 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AUC43_RS14020 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AUC43_RS14030 PF00005 ABC transporter AUC43_RS14030 PF12848 ABC transporter AUC43_RS14065 PF00912 Transglycosylase AUC43_RS14125 PF00593 TonB dependent receptor AUC43_RS14125 PF07715 TonB-dependent Receptor Plug Domain AUC43_RS14130 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AUC43_RS14140 PF13087 AAA domain AUC43_RS14140 PF13195 Protein of unknown function (DUF4011) AUC43_RS14140 PF13086 AAA domain AUC43_RS14170 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AUC43_RS14170 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AUC43_RS14195 PF00303 Thymidylate synthase AUC43_RS14205 PF01063 Amino-transferase class IV AUC43_RS14210 PF17782 DprA winged helix domain AUC43_RS14210 PF02481 DNA recombination-mediator protein A AUC43_RS14220 PF07745 Glycosyl hydrolase family 53 AUC43_RS14225 PF02272 DHHA1 domain AUC43_RS14225 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AUC43_RS14225 PF01411 tRNA synthetases class II (A) AUC43_RS14235 PF02934 GatB/GatE catalytic domain AUC43_RS14235 PF02637 GatB domain AUC43_RS14240 PF00578 AhpC/TSA family AUC43_RS14250 PF03061 Thioesterase superfamily AUC43_RS14265 PF02397 Bacterial sugar transferase AUC43_RS14280 PF00082 Subtilase family AUC43_RS14290 PF00677 Lumazine binding domain AUC43_RS14300 PF01569 PAP2 superfamily AUC43_RS14305 PF01218 Coproporphyrinogen III oxidase AUC43_RS14310 PF02780 Transketolase, C-terminal domain AUC43_RS14310 PF02779 Transketolase, pyrimidine binding domain AUC43_RS14320 PF08032 RNA 2'-O ribose methyltransferase substrate binding AUC43_RS14320 PF00588 SpoU rRNA Methylase family AUC43_RS14340 PF08402 TOBE domain AUC43_RS14340 PF00005 ABC transporter AUC43_RS14355 PF08281 Sigma-70, region 4 AUC43_RS14355 PF04542 Sigma-70 region 2 AUC43_RS14365 PF00083 Sugar (and other) transporter AUC43_RS14375 PF03301 Tryptophan 2,3-dioxygenase AUC43_RS14380 PF01842 ACT domain AUC43_RS14380 PF03315 Serine dehydratase beta chain AUC43_RS14390 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AUC43_RS14390 PF00529 HlyD membrane-fusion protein of T1SS AUC43_RS14395 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AUC43_RS14395 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AUC43_RS14415 PF02545 Maf-like protein AUC43_RS14430 PF13340 Putative transposase of IS4/5 family (DUF4096) AUC43_RS14440 PF01243 Pyridoxamine 5'-phosphate oxidase AUC43_RS14440 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region AUC43_RS14445 PF02622 Uncharacterized ACR, COG1678 AUC43_RS14460 PF00892 EamA-like transporter family AUC43_RS14465 PF01569 PAP2 superfamily AUC43_RS14470 PF01966 HD domain AUC43_RS14480 PF03989 DNA gyrase C-terminal domain, beta-propeller AUC43_RS14480 PF00521 DNA gyrase/topoisomerase IV, subunit A AUC43_RS14495 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase AUC43_RS14495 PF01502 Phosphoribosyl-AMP cyclohydrolase AUC43_RS14500 PF00977 Histidine biosynthesis protein AUC43_RS14505 PF00977 Histidine biosynthesis protein AUC43_RS14510 PF00117 Glutamine amidotransferase class-I AUC43_RS14515 PF00475 Imidazoleglycerol-phosphate dehydratase AUC43_RS14515 PF08645 Polynucleotide kinase 3 phosphatase AUC43_RS14520 PF00155 Aminotransferase class I and II AUC43_RS14525 PF00815 Histidinol dehydrogenase AUC43_RS14530 PF01634 ATP phosphoribosyltransferase AUC43_RS14530 PF08029 HisG, C-terminal domain AUC43_RS14540 PF00834 Ribulose-phosphate 3 epimerase family AUC43_RS14550 PF02390 Putative methyltransferase AUC43_RS14555 PF02875 Mur ligase family, glutamate ligase domain AUC43_RS14555 PF08245 Mur ligase middle domain AUC43_RS14570 PF01618 MotA/TolQ/ExbB proton channel family AUC43_RS14600 PF00579 tRNA synthetases class I (W and Y) AUC43_RS14610 PF00155 Aminotransferase class I and II AUC43_RS14615 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AUC43_RS14615 PF02785 Biotin carboxylase C-terminal domain AUC43_RS14615 PF00289 Biotin carboxylase, N-terminal domain AUC43_RS14625 PF08808 RES domain AUC43_RS14635 PF02585 GlcNAc-PI de-N-acetylase AUC43_RS14640 PF01551 Peptidase family M23 AUC43_RS14640 PF04225 Opacity-associated protein A LysM-like domain AUC43_RS14645 PF07992 Pyridine nucleotide-disulphide oxidoreductase AUC43_RS14650 PF03979 Sigma-70 factor, region 1.1 AUC43_RS14650 PF00140 Sigma-70 factor, region 1.2 AUC43_RS14650 PF04542 Sigma-70 region 2 AUC43_RS14650 PF04539 Sigma-70 region 3 AUC43_RS14650 PF04545 Sigma-70, region 4 AUC43_RS14655 PF00575 S1 RNA binding domain AUC43_RS14655 PF03725 3' exoribonuclease family, domain 2 AUC43_RS14655 PF01138 3' exoribonuclease family, domain 1 AUC43_RS14655 PF00013 KH domain AUC43_RS14655 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AUC43_RS14660 PF00312 Ribosomal protein S15 AUC43_RS14680 PF00453 Ribosomal protein L20 AUC43_RS14685 PF01632 Ribosomal protein L35 AUC43_RS14690 PF00707 Translation initiation factor IF-3, C-terminal domain AUC43_RS14690 PF05198 Translation initiation factor IF-3, N-terminal domain AUC43_RS14695 PF02824 TGS domain AUC43_RS14695 PF03129 Anticodon binding domain AUC43_RS14695 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AUC43_RS14695 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AUC43_RS14710 PF00521 DNA gyrase/topoisomerase IV, subunit A AUC43_RS14720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AUC43_RS14720 PF00986 DNA gyrase B subunit, carboxyl terminus AUC43_RS14720 PF00204 DNA gyrase B AUC43_RS14720 PF01751 Toprim domain AUC43_RS14725 PF01594 AI-2E family transporter AUC43_RS14735 PF01594 AI-2E family transporter AUC43_RS14745 PF00929 Exonuclease AUC43_RS14745 PF13307 Helicase C-terminal domain AUC43_RS14745 PF04851 Type III restriction enzyme, res subunit AUC43_RS14750 PF13193 AMP-binding enzyme C-terminal domain AUC43_RS14750 PF16177 Acetyl-coenzyme A synthetase N-terminus AUC43_RS14750 PF00501 AMP-binding enzyme AUC43_RS14755 PF13193 AMP-binding enzyme C-terminal domain AUC43_RS14755 PF16177 Acetyl-coenzyme A synthetase N-terminus AUC43_RS14755 PF00501 AMP-binding enzyme AUC43_RS14760 PF00072 Response regulator receiver domain AUC43_RS14760 PF00486 Transcriptional regulatory protein, C terminal AUC43_RS14765 PF00989 PAS fold AUC43_RS14765 PF00512 His Kinase A (phospho-acceptor) domain AUC43_RS14765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AUC43_RS14765 PF16736 Single Cache-like AUC43_RS14775 PF07690 Major Facilitator Superfamily AUC43_RS14790 PF01613 Flavin reductase like domain AUC43_RS14795 PF01872 RibD C-terminal domain AUC43_RS14800 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AUC43_RS14800 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AUC43_RS14805 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE AUC43_RS14820 PF00155 Aminotransferase class I and II AUC43_RS14825 PF01627 Hpt domain AUC43_RS14825 PF00672 HAMP domain AUC43_RS14825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AUC43_RS14825 PF00072 Response regulator receiver domain AUC43_RS14825 PF00512 His Kinase A (phospho-acceptor) domain AUC43_RS14825 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AUC43_RS14830 PF01966 HD domain AUC43_RS14835 PF00132 Bacterial transferase hexapeptide (six repeats) AUC43_RS14835 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD AUC43_RS14840 PF07977 FabA-like domain AUC43_RS14840 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase AUC43_RS14845 PF00132 Bacterial transferase hexapeptide (six repeats) AUC43_RS14845 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 AUC43_RS14850 PF00005 ABC transporter AUC43_RS14865 PF02464 Competence-damaged protein AUC43_RS14865 PF00994 Probable molybdopterin binding domain AUC43_RS14865 PF18146 Damage-inducible protein CinA KH domain AUC43_RS14870 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AUC43_RS14870 PF00925 GTP cyclohydrolase II AUC43_RS14885 PF02254 TrkA-N domain AUC43_RS14885 PF07885 Ion channel AUC43_RS14890 PF01807 CHC2 zinc finger AUC43_RS14890 PF08275 DNA primase catalytic core, N-terminal domain AUC43_RS14890 PF10410 DnaB-helicase binding domain of primase AUC43_RS14895 PF00133 tRNA synthetases class I (I, L, M and V) AUC43_RS14895 PF13603 Leucyl-tRNA synthetase, Domain 2 AUC43_RS14895 PF08264 Anticodon-binding domain of tRNA AUC43_RS14905 PF04237 YjbR AUC43_RS14915 PF04551 GcpE protein AUC43_RS14920 PF00085 Thioredoxin AUC43_RS14950 PF18318 Glutamine synthetase C-terminal domain AUC43_RS14950 PF00120 Glutamine synthetase, catalytic domain AUC43_RS14950 PF12437 Glutamine synthetase type III N terminal AUC43_RS14960 PF01938 TRAM domain AUC43_RS14960 PF00919 Uncharacterized protein family UPF0004 AUC43_RS14960 PF04055 Radical SAM superfamily AUC43_RS14965 PF00005 ABC transporter AUC43_RS14965 PF12704 MacB-like periplasmic core domain AUC43_RS14965 PF02687 FtsX-like permease family AUC43_RS14975 PF01569 PAP2 superfamily AUC43_RS14980 PF00703 Glycosyl hydrolases family 2 AUC43_RS14980 PF16355 Domain of unknown function (DUF4982) AUC43_RS14980 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AUC43_RS14980 PF02837 Glycosyl hydrolases family 2, sugar binding domain AUC43_RS14990 PF10609 NUBPL iron-transfer P-loop NTPase AUC43_RS14990 PF01883 Iron-sulfur cluster assembly protein AUC43_RS15000 PF01554 MatE AUC43_RS15025 PF02606 Tetraacyldisaccharide-1-P 4'-kinase AUC43_RS15035 PF01784 NIF3 (NGG1p interacting factor 3) AUC43_RS15050 PF00425 chorismate binding enzyme AUC43_RS15050 PF04715 Anthranilate synthase component I, N terminal region AUC43_RS15055 PF01938 TRAM domain AUC43_RS15055 PF00919 Uncharacterized protein family UPF0004 AUC43_RS15055 PF04055 Radical SAM superfamily AUC43_RS15060 PF00158 Sigma-54 interaction domain AUC43_RS15060 PF00072 Response regulator receiver domain AUC43_RS15060 PF02954 Bacterial regulatory protein, Fis family AUC43_RS15085 PF00166 Chaperonin 10 Kd subunit AUC43_RS15090 PF00118 TCP-1/cpn60 chaperonin family AUC43_RS15095 PF00854 POT family AUC43_RS15105 PF01293 Phosphoenolpyruvate carboxykinase AUC43_RS15110 PF00106 short chain dehydrogenase AUC43_RS15115 PF04452 RNA methyltransferase AUC43_RS15120 PF08448 PAS fold AUC43_RS15120 PF08447 PAS fold AUC43_RS15120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AUC43_RS15125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AUC43_RS15125 PF00072 Response regulator receiver domain AUC43_RS15125 PF13426 PAS domain AUC43_RS15130 PF02954 Bacterial regulatory protein, Fis family AUC43_RS15130 PF00072 Response regulator receiver domain AUC43_RS15130 PF00158 Sigma-54 interaction domain AUC43_RS15150 PF01734 Patatin-like phospholipase AUC43_RS15155 PF00753 Metallo-beta-lactamase superfamily AUC43_RS15160 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit AUC43_RS15210 PF13340 Putative transposase of IS4/5 family (DUF4096) AUC43_RS15280 PF04860 Phage portal protein AUC43_RS15410 PF13438 Domain of unknown function (DUF4113) AUC43_RS15410 PF00817 impB/mucB/samB family AUC43_RS15410 PF11799 impB/mucB/samB family C-terminal domain AUC43_RS15410 PF11798 IMS family HHH motif AUC43_RS15415 PF00717 Peptidase S24-like AUC43_RS15420 PF01223 DNA/RNA non-specific endonuclease AUC43_RS15495 PF08281 Sigma-70, region 4 AUC43_RS15495 PF04542 Sigma-70 region 2 AUC43_RS15500 PF14759 Reductase C-terminal AUC43_RS15500 PF07992 Pyridine nucleotide-disulphide oxidoreductase AUC43_RS15510 PF00232 Glycosyl hydrolase family 1 AUC43_RS15525 PF01339 CheB methylesterase AUC43_RS15530 PF13333 Integrase core domain AUC43_RS15530 PF13276 HTH-like domain AUC43_RS15530 PF00665 Integrase core domain AUC43_RS15560 PF02743 Cache domain AUC43_RS15560 PF00672 HAMP domain AUC43_RS15560 PF00211 Adenylate and Guanylate cyclase catalytic domain AUC43_RS15565 PF00027 Cyclic nucleotide-binding domain AUC43_RS15565 PF07885 Ion channel AUC43_RS15570 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) AUC43_RS15570 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 AUC43_RS15575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AUC43_RS15575 PF00512 His Kinase A (phospho-acceptor) domain AUC43_RS15590 PF06736 Protein of unknown function (DUF1211) AUC43_RS15620 PF00270 DEAD/DEAH box helicase AUC43_RS15620 PF00271 Helicase conserved C-terminal domain AUC43_RS15635 PF01433 Peptidase family M1 domain AUC43_RS15635 PF11838 ERAP1-like C-terminal domain AUC43_RS15645 PF00248 Aldo/keto reductase family AUC43_RS15650 PF01112 Asparaginase AUC43_RS15680 PF04107 Glutamate-cysteine ligase family 2(GCS2) AUC43_RS15695 PF06803 Protein of unknown function (DUF1232) AUC43_RS15715 PF01370 NAD dependent epimerase/dehydratase family AUC43_RS15730 PF00270 DEAD/DEAH box helicase AUC43_RS15730 PF00271 Helicase conserved C-terminal domain AUC43_RS15735 PF00313 'Cold-shock' DNA-binding domain AUC43_RS15745 PF00580 UvrD/REP helicase N-terminal domain AUC43_RS15745 PF13361 UvrD-like helicase C-terminal domain AUC43_RS15745 PF12705 PD-(D/E)XK nuclease superfamily AUC43_RS15750 PF00069 Protein kinase domain AUC43_RS15755 PF04389 Peptidase family M28 AUC43_RS15755 PF04151 Bacterial pre-peptidase C-terminal domain AUC43_RS15760 PF13472 GDSL-like Lipase/Acylhydrolase family AUC43_RS15760 PF07859 alpha/beta hydrolase fold AUC43_RS15770 PF02436 Conserved carboxylase domain AUC43_RS15770 PF00682 HMGL-like AUC43_RS15770 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AUC43_RS15770 PF00289 Biotin carboxylase, N-terminal domain AUC43_RS15770 PF00364 Biotin-requiring enzyme AUC43_RS15770 PF02785 Biotin carboxylase C-terminal domain AUC43_RS15790 PF00875 DNA photolyase AUC43_RS15790 PF03441 FAD binding domain of DNA photolyase AUC43_RS15800 PF03109 ABC1 family AUC43_RS15820 PF00351 Biopterin-dependent aromatic amino acid hydroxylase AUC43_RS15825 PF18152 DAHP synthase ferredoxin-like domain AUC43_RS15825 PF00793 DAHP synthetase I family AUC43_RS15830 PF00290 Tryptophan synthase alpha chain AUC43_RS15835 PF00291 Pyridoxal-phosphate dependent enzyme AUC43_RS15840 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase AUC43_RS15845 PF00218 Indole-3-glycerol phosphate synthase AUC43_RS15850 PF02885 Glycosyl transferase family, helical bundle domain AUC43_RS15850 PF00591 Glycosyl transferase family, a/b domain AUC43_RS15855 PF00117 Glutamine amidotransferase class-I AUC43_RS15860 PF00425 chorismate binding enzyme AUC43_RS15860 PF04715 Anthranilate synthase component I, N terminal region AUC43_RS15865 PF00756 Putative esterase AUC43_RS15880 PF00593 TonB dependent receptor AUC43_RS15880 PF07715 TonB-dependent Receptor Plug Domain AUC43_RS15885 PF07980 SusD family AUC43_RS15905 PF00128 Alpha amylase, catalytic domain AUC43_RS15905 PF02806 Alpha amylase, C-terminal all-beta domain AUC43_RS15905 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AUC43_RS15930 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AUC43_RS15930 PF00034 Cytochrome c AUC43_RS15935 PF07995 Glucose / Sorbosone dehydrogenase AUC43_RS15940 PF02954 Bacterial regulatory protein, Fis family AUC43_RS15940 PF00158 Sigma-54 interaction domain AUC43_RS15940 PF00072 Response regulator receiver domain AUC43_RS15955 PF02780 Transketolase, C-terminal domain AUC43_RS15955 PF02779 Transketolase, pyrimidine binding domain AUC43_RS15965 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AUC43_RS15970 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AUC43_RS15970 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AUC43_RS15985 PF00672 HAMP domain AUC43_RS15985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AUC43_RS15985 PF00512 His Kinase A (phospho-acceptor) domain AUC43_RS15990 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AUC43_RS15995 PF00873 AcrB/AcrD/AcrF family AUC43_RS16000 PF02321 Outer membrane efflux protein AUC43_RS16015 PF01048 Phosphorylase superfamily AUC43_RS16015 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus AUC43_RS16020 PF07969 Amidohydrolase family AUC43_RS16025 PF05163 DinB family AUC43_RS16040 PF17763 Glutaminase/Asparaginase C-terminal domain AUC43_RS16040 PF00710 Asparaginase, N-terminal AUC43_RS16045 PF06039 Malate:quinone oxidoreductase (Mqo) AUC43_RS16050 PF00106 short chain dehydrogenase AUC43_RS16055 PF00583 Acetyltransferase (GNAT) family AUC43_RS16065 PF00797 N-acetyltransferase AUC43_RS16070 PF00106 short chain dehydrogenase AUC43_RS16075 PF00857 Isochorismatase family AUC43_RS16100 PF05139 Erythromycin esterase AUC43_RS16100 PF00156 Phosphoribosyl transferase domain AUC43_RS16105 PF01738 Dienelactone hydrolase family AUC43_RS16105 PF00156 Phosphoribosyl transferase domain AUC43_RS16130 PF17392 Urocanase C-terminal domain AUC43_RS16130 PF01175 Urocanase Rossmann-like domain AUC43_RS16130 PF17391 Urocanase N-terminal domain AUC43_RS16145 PF00753 Metallo-beta-lactamase superfamily AUC43_RS16150 PF00491 Arginase family AUC43_RS16155 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase AUC43_RS16160 PF16363 GDP-mannose 4,6 dehydratase AUC43_RS16170 PF00535 Glycosyl transferase family 2 AUC43_RS16180 PF01709 Transcriptional regulator AUC43_RS16195 PF00091 Tubulin/FtsZ family, GTPase domain AUC43_RS16195 PF12327 FtsZ family, C-terminal domain AUC43_RS16200 PF02491 SHS2 domain inserted in FTSA AUC43_RS16210 PF08245 Mur ligase middle domain AUC43_RS16210 PF01225 Mur ligase family, catalytic domain AUC43_RS16210 PF02875 Mur ligase family, glutamate ligase domain AUC43_RS16215 PF03033 Glycosyltransferase family 28 N-terminal domain AUC43_RS16215 PF04101 Glycosyltransferase family 28 C-terminal domain AUC43_RS16220 PF01098 Cell cycle protein AUC43_RS16225 PF08245 Mur ligase middle domain AUC43_RS16225 PF02875 Mur ligase family, glutamate ligase domain AUC43_RS16230 PF00953 Glycosyl transferase family 4 AUC43_RS16230 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 AUC43_RS16235 PF08245 Mur ligase middle domain AUC43_RS16235 PF01225 Mur ligase family, catalytic domain AUC43_RS16235 PF02875 Mur ligase family, glutamate ligase domain AUC43_RS16250 PF01795 MraW methylase family AUC43_RS16255 PF02381 MraZ protein, putative antitoxin-like AUC43_RS16275 PF00487 Fatty acid desaturase AUC43_RS16285 PF02401 LytB protein AUC43_RS16300 PF01593 Flavin containing amine oxidoreductase AUC43_RS16305 PF08281 Sigma-70, region 4 AUC43_RS16305 PF04542 Sigma-70 region 2 AUC43_RS16310 PF02310 B12 binding domain AUC43_RS16310 PF02607 B12 binding domain AUC43_RS16310 PF13411 MerR HTH family regulatory protein AUC43_RS16320 PF00378 Enoyl-CoA hydratase/isomerase AUC43_RS16325 PF03772 Competence protein AUC43_RS16325 PF00753 Metallo-beta-lactamase superfamily AUC43_RS16325 PF13567 Domain of unknown function (DUF4131) AUC43_RS16340 PF02562 PhoH-like protein AUC43_RS16345 PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase AUC43_RS16350 PF07859 alpha/beta hydrolase fold AUC43_RS16360 PF00226 DnaJ domain AUC43_RS16360 PF07743 HSCB C-terminal oligomerisation domain AUC43_RS16375 PF10282 Lactonase, 7-bladed beta-propeller AUC43_RS16380 PF01594 AI-2E family transporter AUC43_RS16415 PF01979 Amidohydrolase family AUC43_RS16425 PF13520 Amino acid permease AUC43_RS16435 PF00753 Metallo-beta-lactamase superfamily AUC43_RS16435 PF16123 Hydroxyacylglutathione hydrolase C-terminus AUC43_RS16450 PF12320 Type 5 capsule protein repressor C-terminal domain AUC43_RS16450 PF00149 Calcineurin-like phosphoesterase AUC43_RS16455 PF13476 AAA domain AUC43_RS16470 PF00085 Thioredoxin AUC43_RS16485 PF01048 Phosphorylase superfamily AUC43_RS16490 PF01343 Peptidase family S49 AUC43_RS16495 PF12002 MgsA AAA+ ATPase C terminal AUC43_RS16495 PF00004 ATPase family associated with various cellular activities (AAA) AUC43_RS16495 PF16193 AAA C-terminal domain AUC43_RS16505 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AUC43_RS16505 PF07992 Pyridine nucleotide-disulphide oxidoreductase AUC43_RS16515 PF01494 FAD binding domain AUC43_RS16540 PF12706 Beta-lactamase superfamily domain AUC43_RS16545 PF00849 RNA pseudouridylate synthase AUC43_RS16550 PF00012 Hsp70 protein AUC43_RS16565 PF00731 AIR carboxylase AUC43_RS16570 PF01914 MarC family integral membrane protein AUC43_RS16575 PF01208 Uroporphyrinogen decarboxylase (URO-D) AUC43_RS16580 PF03831 PhnA domain AUC43_RS16580 PF08274 PhnA Zinc-Ribbon AUC43_RS16585 PF00294 pfkB family carbohydrate kinase AUC43_RS16585 PF01467 Cytidylyltransferase-like AUC43_RS16590 PF00155 Aminotransferase class I and II AUC43_RS16600 PF13662 Toprim domain AUC43_RS16600 PF02132 RecR protein AUC43_RS16650 PF00375 Sodium:dicarboxylate symporter family AUC43_RS16670 PF01569 PAP2 superfamily AUC43_RS16700 PF00474 Sodium:solute symporter family AUC43_RS16710 PF00005 ABC transporter AUC43_RS16710 PF00664 ABC transporter transmembrane region AUC43_RS16725 PF00106 short chain dehydrogenase AUC43_RS16735 PF03009 Glycerophosphoryl diester phosphodiesterase family AUC43_RS16740 PF01569 PAP2 superfamily AUC43_RS16745 PF13840 ACT domain AUC43_RS16745 PF00696 Amino acid kinase family AUC43_RS16750 PF02585 GlcNAc-PI de-N-acetylase AUC43_RS16755 PF00082 Subtilase family AUC43_RS16760 PF00106 short chain dehydrogenase AUC43_RS16765 PF00801 PKD domain AUC43_RS16765 PF05547 Immune inhibitor A peptidase M6 AUC43_RS16775 PF05958 tRNA (Uracil-5-)-methyltransferase AUC43_RS16775 PF01938 TRAM domain AUC43_RS16800 PF02769 AIR synthase related protein, C-terminal domain AUC43_RS16800 PF00586 AIR synthase related protein, N-terminal domain AUC43_RS16810 PF00440 Bacterial regulatory proteins, tetR family AUC43_RS16815 PF05138 Phenylacetic acid catabolic protein AUC43_RS16830 PF01883 Iron-sulfur cluster assembly protein AUC43_RS16845 PF00175 Oxidoreductase NAD-binding domain AUC43_RS16845 PF00970 Oxidoreductase FAD-binding domain AUC43_RS16845 PF00111 2Fe-2S iron-sulfur cluster binding domain AUC43_RS16855 PF02687 FtsX-like permease family AUC43_RS16855 PF12704 MacB-like periplasmic core domain AUC43_RS16860 PF07075 Protein of unknown function (DUF1343) AUC43_RS16865 PF00551 Formyl transferase AUC43_RS16865 PF02911 Formyl transferase, C-terminal domain AUC43_RS16870 PF00186 Dihydrofolate reductase AUC43_RS16875 PF08240 Alcohol dehydrogenase GroES-like domain AUC43_RS16875 PF00107 Zinc-binding dehydrogenase AUC43_RS16890 PF03551 Transcriptional regulator PadR-like family AUC43_RS16900 PF01743 Poly A polymerase head domain AUC43_RS16900 PF02272 DHHA1 domain AUC43_RS16900 PF01368 DHH family AUC43_RS16900 PF00571 CBS domain AUC43_RS16905 PF01300 Telomere recombination AUC43_RS16910 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AUC43_RS16910 PF01261 Xylose isomerase-like TIM barrel AUC43_RS16915 PF00266 Aminotransferase class-V AUC43_RS16920 PF01592 NifU-like N terminal domain AUC43_RS16930 PF01521 Iron-sulphur cluster biosynthesis AUC43_RS16940 PF13439 Glycosyltransferase Family 4 AUC43_RS16940 PF00534 Glycosyl transferases group 1 AUC43_RS16945 PF04397 LytTr DNA-binding domain AUC43_RS16945 PF00072 Response regulator receiver domain AUC43_RS16950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AUC43_RS16950 PF07694 5TMR of 5TMR-LYT AUC43_RS16950 PF06580 Histidine kinase AUC43_RS16955 PF03714 Bacterial pullanase-associated domain AUC43_RS16955 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AUC43_RS16955 PF00128 Alpha amylase, catalytic domain AUC43_RS16960 PF00294 pfkB family carbohydrate kinase AUC43_RS16975 PF00331 Glycosyl hydrolase family 10 AUC43_RS16980 PF06964 Alpha-L-arabinofuranosidase C-terminal domain AUC43_RS16985 PF01261 Xylose isomerase-like TIM barrel AUC43_RS16990 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AUC43_RS16990 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AUC43_RS16995 PF01915 Glycosyl hydrolase family 3 C-terminal domain AUC43_RS16995 PF07691 PA14 domain AUC43_RS16995 PF14310 Fibronectin type III-like domain AUC43_RS16995 PF00933 Glycosyl hydrolase family 3 N terminal domain AUC43_RS17005 PF01301 Glycosyl hydrolases family 35 AUC43_RS17015 PF00593 TonB dependent receptor AUC43_RS17015 PF07715 TonB-dependent Receptor Plug Domain AUC43_RS17025 PF07488 Glycosyl hydrolase family 67 middle domain AUC43_RS17025 PF03648 Glycosyl hydrolase family 67 N-terminus AUC43_RS17025 PF07477 Glycosyl hydrolase family 67 C-terminus AUC43_RS17030 PF03786 D-mannonate dehydratase (UxuA) AUC43_RS17035 PF00356 Bacterial regulatory proteins, lacI family AUC43_RS17050 PF00691 OmpA family AUC43_RS17050 PF04972 BON domain AUC43_RS17065 PF12857 TOBE-like domain AUC43_RS17065 PF00005 ABC transporter AUC43_RS17070 PF02954 Bacterial regulatory protein, Fis family AUC43_RS17070 PF00072 Response regulator receiver domain AUC43_RS17070 PF00158 Sigma-54 interaction domain AUC43_RS17075 PF00512 His Kinase A (phospho-acceptor) domain AUC43_RS17075 PF16767 Sensor domain of alginate biosynthesis sensor protein KinB AUC43_RS17075 PF08448 PAS fold AUC43_RS17075 PF00672 HAMP domain AUC43_RS17075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AUC43_RS17085 PF04052 TolB amino-terminal domain AUC43_RS17085 PF07676 WD40-like Beta Propeller Repeat AUC43_RS17100 PF05368 NmrA-like family AUC43_RS17105 PF13419 Haloacid dehalogenase-like hydrolase AUC43_RS17115 PF00989 PAS fold AUC43_RS17115 PF00512 His Kinase A (phospho-acceptor) domain AUC43_RS17115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AUC43_RS17120 PF00595 PDZ domain AUC43_RS17120 PF17804 Tail specific protease N-terminal domain AUC43_RS17120 PF11818 C-terminal domain of tail specific protease (DUF3340) AUC43_RS17120 PF03572 Peptidase family S41 AUC43_RS17125 PF11798 IMS family HHH motif AUC43_RS17125 PF00817 impB/mucB/samB family AUC43_RS17125 PF11799 impB/mucB/samB family C-terminal domain AUC43_RS17160 PF00072 Response regulator receiver domain AUC43_RS17160 PF00196 Bacterial regulatory proteins, luxR family AUC43_RS17165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AUC43_RS17165 PF07730 Histidine kinase AUC43_RS17175 PF02348 Cytidylyltransferase AUC43_RS17180 PF00456 Transketolase, thiamine diphosphate binding domain AUC43_RS17185 PF02780 Transketolase, C-terminal domain AUC43_RS17185 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AUC43_RS17185 PF02779 Transketolase, pyrimidine binding domain AUC43_RS17190 PF00202 Aminotransferase class-III AUC43_RS17205 PF03102 NeuB family AUC43_RS17205 PF08666 SAF domain AUC43_RS17225 PF00582 Universal stress protein family AUC43_RS17240 PF00005 ABC transporter AUC43_RS17240 PF00664 ABC transporter transmembrane region AUC43_RS17260 PF07669 Eco57I restriction-modification methylase AUC43_RS17260 PF12950 TaqI-like C-terminal specificity domain AUC43_RS17295 PF00326 Prolyl oligopeptidase family AUC43_RS17295 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region AUC43_RS17305 PF00561 alpha/beta hydrolase fold AUC43_RS17365 PF01590 GAF domain AUC43_RS17365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AUC43_RS17365 PF08446 PAS fold AUC43_RS17365 PF00360 Phytochrome region AUC43_RS17370 PF07930 D-aminopeptidase, domain B AUC43_RS17370 PF00144 Beta-lactamase AUC43_RS17375 PF01546 Peptidase family M20/M25/M40 AUC43_RS17390 PF00360 Phytochrome region AUC43_RS17390 PF08446 PAS fold AUC43_RS17390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AUC43_RS17390 PF01590 GAF domain AUC43_RS17400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AUC43_RS17400 PF00512 His Kinase A (phospho-acceptor) domain AUC43_RS17400 PF00989 PAS fold AUC43_RS17405 PF00360 Phytochrome region AUC43_RS17405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AUC43_RS17405 PF01590 GAF domain AUC43_RS17405 PF08446 PAS fold AUC43_RS17410 PF01590 GAF domain AUC43_RS17410 PF00360 Phytochrome region AUC43_RS17410 PF08446 PAS fold AUC43_RS17410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AUC43_RS17415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AUC43_RS17415 PF00989 PAS fold AUC43_RS17415 PF00512 His Kinase A (phospho-acceptor) domain AUC43_RS17425 PF04539 Sigma-70 region 3 AUC43_RS17425 PF04545 Sigma-70, region 4 AUC43_RS17425 PF03979 Sigma-70 factor, region 1.1 AUC43_RS17425 PF00140 Sigma-70 factor, region 1.2 AUC43_RS17425 PF04542 Sigma-70 region 2 AUC43_RS17450 PF13419 Haloacid dehalogenase-like hydrolase AUC43_RS17490 PF00162 Phosphoglycerate kinase AUC43_RS17495 PF01820 D-ala D-ala ligase N-terminus AUC43_RS17495 PF07478 D-ala D-ala ligase C-terminus AUC43_RS17510 PF02469 Fasciclin domain AUC43_RS17530 PF00403 Heavy-metal-associated domain AUC43_RS17535 PF03576 Peptidase family S58 AUC43_RS17555 PF00005 ABC transporter AUC43_RS17555 PF00664 ABC transporter transmembrane region AUC43_RS17565 PF00690 Cation transporter/ATPase, N-terminus AUC43_RS17565 PF00689 Cation transporting ATPase, C-terminus AUC43_RS17585 PF08448 PAS fold AUC43_RS17585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AUC43_RS17585 PF08447 PAS fold AUC43_RS17605 PF00440 Bacterial regulatory proteins, tetR family AUC43_RS17605 PF09209 Tetracyclin repressor-like, C-terminal domain AUC43_RS17615 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AUC43_RS17620 PF00005 ABC transporter AUC43_RS17625 PF00005 ABC transporter AUC43_RS17635 PF00005 ABC transporter AUC43_RS17650 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AUC43_RS17650 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AUC43_RS17665 PF02896 PEP-utilising enzyme, TIM barrel domain AUC43_RS17665 PF00391 PEP-utilising enzyme, mobile domain AUC43_RS17665 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AUC43_RS17680 PF02405 Permease MlaE AUC43_RS17685 PF00005 ABC transporter AUC43_RS17695 PF01594 AI-2E family transporter AUC43_RS17710 PF00011 Hsp20/alpha crystallin family AUC43_RS17765 PF00512 His Kinase A (phospho-acceptor) domain AUC43_RS17765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AUC43_RS17770 PF00072 Response regulator receiver domain AUC43_RS17770 PF00486 Transcriptional regulatory protein, C terminal AUC43_RS17775 PF01327 Polypeptide deformylase AUC43_RS17785 PF00691 OmpA family AUC43_RS17800 PF02566 OsmC-like protein AUC43_RS17805 PF00549 CoA-ligase AUC43_RS17805 PF08442 ATP-grasp domain AUC43_RS17815 PF00005 ABC transporter AUC43_RS17845 PF13426 PAS domain AUC43_RS17845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AUC43_RS17845 PF00072 Response regulator receiver domain AUC43_RS17850 PF00072 Response regulator receiver domain AUC43_RS17850 PF00196 Bacterial regulatory proteins, luxR family AUC43_RS17860 PF00535 Glycosyl transferase family 2 AUC43_RS17865 PF04794 YdjC-like protein AUC43_RS17890 PF00570 HRDC domain AUC43_RS17890 PF16124 RecQ zinc-binding AUC43_RS17890 PF00271 Helicase conserved C-terminal domain AUC43_RS17890 PF00270 DEAD/DEAH box helicase AUC43_RS17890 PF09382 RQC domain AUC43_RS17895 PF00756 Putative esterase AUC43_RS17905 PF04231 Endonuclease I AUC43_RS17950 PF07715 TonB-dependent Receptor Plug Domain AUC43_RS17950 PF00593 TonB dependent receptor AUC43_RS17960 PF01565 FAD binding domain AUC43_RS17960 PF08031 Berberine and berberine like AUC43_RS17980 PF00171 Aldehyde dehydrogenase family AUC43_RS17985 PF00082 Subtilase family AUC43_RS18000 PF00717 Peptidase S24-like AUC43_RS18030 PF12787 EcsC protein family AUC43_RS18050 PF14322 Starch-binding associating with outer membrane AUC43_RS18050 PF07980 SusD family AUC43_RS18055 PF00593 TonB dependent receptor AUC43_RS18055 PF07715 TonB-dependent Receptor Plug Domain AUC43_RS18060 PF00330 Aconitase family (aconitate hydratase) AUC43_RS18060 PF00694 Aconitase C-terminal domain AUC43_RS18075 PF00067 Cytochrome P450 AUC43_RS18085 PF00348 Polyprenyl synthetase AUC43_RS18090 PF00561 alpha/beta hydrolase fold AUC43_RS18095 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AUC43_RS18115 PF00698 Acyl transferase domain AUC43_RS18135 PF02910 Fumarate reductase flavoprotein C-term AUC43_RS18135 PF00890 FAD binding domain AUC43_RS18140 PF13085 2Fe-2S iron-sulfur cluster binding domain AUC43_RS18150 PF07690 Major Facilitator Superfamily AUC43_RS18155 PF03358 NADPH-dependent FMN reductase AUC43_RS18170 PF00271 Helicase conserved C-terminal domain AUC43_RS18170 PF03880 DbpA RNA binding domain AUC43_RS18170 PF00270 DEAD/DEAH box helicase AUC43_RS18190 PF01043 SecA preprotein cross-linking domain AUC43_RS18190 PF07517 SecA DEAD-like domain AUC43_RS18190 PF02810 SEC-C motif AUC43_RS18190 PF07516 SecA Wing and Scaffold domain AUC43_RS18210 PF02469 Fasciclin domain AUC43_RS18220 PF17954 Quercetinase C-terminal cupin domain AUC43_RS18220 PF02678 Pirin AUC43_RS18230 PF00271 Helicase conserved C-terminal domain AUC43_RS18230 PF00570 HRDC domain AUC43_RS18230 PF09382 RQC domain AUC43_RS18230 PF16124 RecQ zinc-binding AUC43_RS18230 PF00270 DEAD/DEAH box helicase AUC43_RS18235 PF10672 S-adenosylmethionine-dependent methyltransferase AUC43_RS18235 PF01170 Putative RNA methylase family UPF0020 AUC43_RS18235 PF02926 THUMP domain AUC43_RS18240 PF07690 Major Facilitator Superfamily AUC43_RS18245 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family AUC43_RS18250 PF01565 FAD binding domain AUC43_RS18250 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AUC43_RS18260 PF00488 MutS domain V AUC43_RS18260 PF01713 Smr domain AUC43_RS18280 PF02348 Cytidylyltransferase AUC43_RS18300 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AUC43_RS18300 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AUC43_RS18310 PF00589 Phage integrase family AUC43_RS18340 PF00717 Peptidase S24-like AUC43_RS18345 PF11799 impB/mucB/samB family C-terminal domain AUC43_RS18345 PF13438 Domain of unknown function (DUF4113) AUC43_RS18345 PF00817 impB/mucB/samB family AUC43_RS18405 PF13539 D-alanyl-D-alanine carboxypeptidase AUC43_RS18430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AUC43_RS18430 PF00989 PAS fold AUC43_RS18440 PF00072 Response regulator receiver domain AUC43_RS18440 PF01339 CheB methylesterase AUC43_RS18445 PF00512 His Kinase A (phospho-acceptor) domain AUC43_RS18445 PF16736 Single Cache-like AUC43_RS18445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AUC43_RS18445 PF00989 PAS fold AUC43_RS18450 PF00561 alpha/beta hydrolase fold AUC43_RS18450 PF00364 Biotin-requiring enzyme AUC43_RS18510 PF00563 EAL domain AUC43_RS18510 PF00990 Diguanylate cyclase, GGDEF domain AUC43_RS18510 PF08447 PAS fold AUC43_RS18510 PF08448 PAS fold AUC43_RS18520 PF00905 Penicillin binding protein transpeptidase domain AUC43_RS18540 PF01339 CheB methylesterase AUC43_RS18540 PF00072 Response regulator receiver domain AUC43_RS18545 PF00512 His Kinase A (phospho-acceptor) domain AUC43_RS18545 PF00672 HAMP domain AUC43_RS18545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AUC43_RS18550 PF00072 Response regulator receiver domain AUC43_RS18550 PF00486 Transcriptional regulatory protein, C terminal AUC43_RS18555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AUC43_RS18555 PF00672 HAMP domain AUC43_RS18555 PF00512 His Kinase A (phospho-acceptor) domain AUC43_RS18555 PF13426 PAS domain AUC43_RS18570 PF03595 Voltage-dependent anion channel AUC43_RS18585 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region AUC43_RS18585 PF00326 Prolyl oligopeptidase family AUC43_RS18590 PF01979 Amidohydrolase family AUC43_RS18595 PF03631 Virulence factor BrkB AUC43_RS18600 PF00654 Voltage gated chloride channel AUC43_RS18615 PF00982 Glycosyltransferase family 20 AUC43_RS18635 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain AUC43_RS18635 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain AUC43_RS18640 PF08544 GHMP kinases C terminal AUC43_RS18640 PF10509 Galactokinase galactose-binding signature AUC43_RS18640 PF00288 GHMP kinases N terminal domain AUC43_RS18650 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 AUC43_RS18650 PF00703 Glycosyl hydrolases family 2 AUC43_RS18650 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AUC43_RS18650 PF16355 Domain of unknown function (DUF4982) AUC43_RS18650 PF02837 Glycosyl hydrolases family 2, sugar binding domain AUC43_RS18665 PF03150 Di-haem cytochrome c peroxidase AUC43_RS18665 PF00034 Cytochrome c AUC43_RS18675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AUC43_RS18675 PF07730 Histidine kinase AUC43_RS18675 PF05384 Sensor protein DegS AUC43_RS18680 PF08448 PAS fold AUC43_RS18680 PF03705 CheR methyltransferase, all-alpha domain AUC43_RS18680 PF01739 CheR methyltransferase, SAM binding domain AUC43_RS18680 PF01339 CheB methylesterase AUC43_RS18685 PF01339 CheB methylesterase AUC43_RS18685 PF00072 Response regulator receiver domain AUC43_RS18705 PF00005 ABC transporter AUC43_RS18705 PF00664 ABC transporter transmembrane region AUC43_RS18710 PF03976 Polyphosphate kinase 2 (PPK2) AUC43_RS18720 PF00210 Ferritin-like domain AUC43_RS18735 PF05670 NFACT protein RNA binding domain AUC43_RS18740 PF07883 Cupin domain AUC43_RS18745 PF12706 Beta-lactamase superfamily domain AUC43_RS18745 PF03099 Biotin/lipoate A/B protein ligase family AUC43_RS18750 PF00072 Response regulator receiver domain AUC43_RS18750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AUC43_RS18755 PF00072 Response regulator receiver domain AUC43_RS18755 PF09308 LuxQ, periplasmic AUC43_RS18755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AUC43_RS18755 PF00512 His Kinase A (phospho-acceptor) domain AUC43_RS18765 PF01425 Amidase AUC43_RS18775 PF00365 Phosphofructokinase AUC43_RS18785 PF00202 Aminotransferase class-III AUC43_RS18800 PF08281 Sigma-70, region 4 AUC43_RS18800 PF04542 Sigma-70 region 2 AUC43_RS18815 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AUC43_RS18815 PF02779 Transketolase, pyrimidine binding domain AUC43_RS18815 PF02780 Transketolase, C-terminal domain AUC43_RS18830 PF00456 Transketolase, thiamine diphosphate binding domain AUC43_RS18835 PF00578 AhpC/TSA family AUC43_RS18840 PF04225 Opacity-associated protein A LysM-like domain AUC43_RS18840 PF01551 Peptidase family M23 AUC43_RS18845 PF01557 Fumarylacetoacetate (FAA) hydrolase family AUC43_RS18860 PF01225 Mur ligase family, catalytic domain AUC43_RS18860 PF02875 Mur ligase family, glutamate ligase domain AUC43_RS18860 PF08245 Mur ligase middle domain AUC43_RS18865 PF03796 DnaB-like helicase C terminal domain AUC43_RS18865 PF00772 DnaB-like helicase N terminal domain AUC43_RS18870 PF01925 Sulfite exporter TauE/SafE AUC43_RS18895 PF00296 Luciferase-like monooxygenase AUC43_RS18900 PF01738 Dienelactone hydrolase family AUC43_RS18905 PF13593 SBF-like CPA transporter family (DUF4137) AUC43_RS18915 PF00106 short chain dehydrogenase AUC43_RS18925 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AUC43_RS18925 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AUC43_RS18925 PF06827 Zinc finger found in FPG and IleRS AUC43_RS18930 PF02567 Phenazine biosynthesis-like protein AUC43_RS18955 PF01139 tRNA-splicing ligase RtcB AUC43_RS18960 PF00850 Histone deacetylase domain AUC43_RS18985 PF00892 EamA-like transporter family AUC43_RS18995 PF00206 Lyase AUC43_RS19005 PF00696 Amino acid kinase family AUC43_RS19015 PF00764 Arginosuccinate synthase AUC43_RS19020 PF01118 Semialdehyde dehydrogenase, NAD binding domain AUC43_RS19020 PF02774 Semialdehyde dehydrogenase, dimerisation domain AUC43_RS19025 PF00202 Aminotransferase class-III AUC43_RS19030 PF00117 Glutamine amidotransferase class-I AUC43_RS19030 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AUC43_RS19040 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AUC43_RS19040 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AUC43_RS19040 PF02142 MGS-like domain AUC43_RS19045 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AUC43_RS19045 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AUC43_RS19070 PF01712 Deoxynucleoside kinase AUC43_RS19095 PF00082 Subtilase family AUC43_RS19095 PF04151 Bacterial pre-peptidase C-terminal domain AUC43_RS19100 PF00082 Subtilase family AUC43_RS19100 PF04151 Bacterial pre-peptidase C-terminal domain AUC43_RS19110 PF00593 TonB dependent receptor AUC43_RS19110 PF07715 TonB-dependent Receptor Plug Domain AUC43_RS19125 PF01979 Amidohydrolase family AUC43_RS19130 PF02464 Competence-damaged protein AUC43_RS19130 PF18146 Damage-inducible protein CinA KH domain AUC43_RS19130 PF00994 Probable molybdopterin binding domain AUC43_RS19150 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AUC43_RS19165 PF01431 Peptidase family M13 AUC43_RS19165 PF05649 Peptidase family M13 AUC43_RS19170 PF05649 Peptidase family M13 AUC43_RS19170 PF01431 Peptidase family M13 AUC43_RS19175 PF13742 OB-fold nucleic acid binding domain AUC43_RS19175 PF02601 Exonuclease VII, large subunit AUC43_RS19185 PF17200 Single Cache domain 2 AUC43_RS19185 PF07730 Histidine kinase AUC43_RS19190 PF00072 Response regulator receiver domain AUC43_RS19190 PF00196 Bacterial regulatory proteins, luxR family AUC43_RS19205 PF13533 Biotin-lipoyl like AUC43_RS19210 PF00873 AcrB/AcrD/AcrF family AUC43_RS19240 PF04616 Glycosyl hydrolases family 43 AUC43_RS19245 PF07715 TonB-dependent Receptor Plug Domain AUC43_RS19245 PF00593 TonB dependent receptor AUC43_RS19250 PF07980 SusD family AUC43_RS19250 PF14322 Starch-binding associating with outer membrane AUC43_RS19255 PF05270 Alpha-L-arabinofuranosidase B (ABFB) domain AUC43_RS19255 PF04616 Glycosyl hydrolases family 43 AUC43_RS19260 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain AUC43_RS19260 PF04616 Glycosyl hydrolases family 43 AUC43_RS19270 PF13520 Amino acid permease AUC43_RS19290 PF03061 Thioesterase superfamily AUC43_RS19295 PF02618 YceG-like family AUC43_RS19300 PF01300 Telomere recombination AUC43_RS19315 PF08889 WbqC-like protein family AUC43_RS19320 PF00004 ATPase family associated with various cellular activities (AAA) AUC43_RS19320 PF10431 C-terminal, D2-small domain, of ClpB protein AUC43_RS19320 PF02861 Clp amino terminal domain, pathogenicity island component AUC43_RS19320 PF17871 AAA lid domain AUC43_RS19320 PF07724 AAA domain (Cdc48 subfamily) AUC43_RS19325 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain AUC43_RS19325 PF00326 Prolyl oligopeptidase family AUC43_RS19330 PF01039 Carboxyl transferase domain AUC43_RS19335 PF05343 M42 glutamyl aminopeptidase AUC43_RS19340 PF01497 Periplasmic binding protein AUC43_RS19345 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AUC43_RS19350 PF01761 3-dehydroquinate synthase AUC43_RS19360 PF00793 DAHP synthetase I family AUC43_RS19360 PF18152 DAHP synthase ferredoxin-like domain AUC43_RS19380 PF11818 C-terminal domain of tail specific protease (DUF3340) AUC43_RS19380 PF00595 PDZ domain AUC43_RS19380 PF03572 Peptidase family S41 AUC43_RS19380 PF17804 Tail specific protease N-terminal domain AUC43_RS19390 PF14229 Domain of unknown function (DUF4332) AUC43_RS19390 PF00152 tRNA synthetases class II (D, K and N) AUC43_RS19390 PF01336 OB-fold nucleic acid binding domain AUC43_RS19425 PF01738 Dienelactone hydrolase family AUC43_RS19445 PF03786 D-mannonate dehydratase (UxuA) AUC43_RS19450 PF13649 Methyltransferase domain AUC43_RS19460 PF00106 short chain dehydrogenase AUC43_RS19465 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AUC43_RS19475 PF01095 Pectinesterase AUC43_RS19485 PF02463 RecF/RecN/SMC N terminal domain AUC43_RS19495 PF04127 DNA / pantothenate metabolism flavoprotein AUC43_RS19495 PF02441 Flavoprotein AUC43_RS19500 PF04127 DNA / pantothenate metabolism flavoprotein AUC43_RS19500 PF02441 Flavoprotein AUC43_RS19520 PF01171 PP-loop family AUC43_RS19520 PF11734 TilS substrate C-terminal domain AUC43_RS19525 PF00686 Starch binding domain AUC43_RS19525 PF01833 IPT/TIG domain AUC43_RS19525 PF00128 Alpha amylase, catalytic domain AUC43_RS19525 PF02806 Alpha amylase, C-terminal all-beta domain AUC43_RS19530 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AUC43_RS19530 PF00056 lactate/malate dehydrogenase, NAD binding domain AUC43_RS19550 PF01119 DNA mismatch repair protein, C-terminal domain AUC43_RS19550 PF08676 MutL C terminal dimerisation domain AUC43_RS19555 PF01915 Glycosyl hydrolase family 3 C-terminal domain AUC43_RS19555 PF00933 Glycosyl hydrolase family 3 N terminal domain AUC43_RS19560 PF13439 Glycosyltransferase Family 4 AUC43_RS19560 PF00534 Glycosyl transferases group 1 AUC43_RS19570 PF01521 Iron-sulphur cluster biosynthesis AUC43_RS19575 PF01804 Penicillin amidase AUC43_RS19610 PF00005 ABC transporter AUC43_RS19610 PF13732 Domain of unknown function (DUF4162) AUC43_RS19625 PF01556 DnaJ C terminal domain AUC43_RS19625 PF00226 DnaJ domain AUC43_RS19625 PF00684 DnaJ central domain AUC43_RS19630 PF01025 GrpE AUC43_RS19635 PF01926 50S ribosome-binding GTPase AUC43_RS19635 PF01018 GTP1/OBG AUC43_RS19645 PF11734 TilS substrate C-terminal domain AUC43_RS19645 PF01171 PP-loop family AUC43_RS19645 PF00156 Phosphoribosyl transferase domain AUC43_RS19650 PF03030 Inorganic H+ pyrophosphatase AUC43_RS19680 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AUC43_RS19685 PF00535 Glycosyl transferase family 2 AUC43_RS19695 PF00535 Glycosyl transferase family 2 AUC43_RS19710 PF16363 GDP-mannose 4,6 dehydratase AUC43_RS19715 PF00535 Glycosyl transferase family 2 AUC43_RS19720 PF02911 Formyl transferase, C-terminal domain AUC43_RS19720 PF00551 Formyl transferase AUC43_RS19730 PF00535 Glycosyl transferase family 2 AUC43_RS19735 PF00551 Formyl transferase AUC43_RS19735 PF02911 Formyl transferase, C-terminal domain AUC43_RS19745 PF01370 NAD dependent epimerase/dehydratase family AUC43_RS19750 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AUC43_RS19770 PF00535 Glycosyl transferase family 2 AUC43_RS19770 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 AUC43_RS19775 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 AUC43_RS19775 PF00535 Glycosyl transferase family 2 AUC43_RS19780 PF00535 Glycosyl transferase family 2 AUC43_RS19785 PF00535 Glycosyl transferase family 2 AUC43_RS19790 PF00664 ABC transporter transmembrane region AUC43_RS19790 PF00005 ABC transporter AUC43_RS19820 PF01370 NAD dependent epimerase/dehydratase family AUC43_RS19825 PF00535 Glycosyl transferase family 2 AUC43_RS19840 PF13276 HTH-like domain AUC43_RS19840 PF00665 Integrase core domain AUC43_RS19840 PF13333 Integrase core domain AUC43_RS19845 PF00535 Glycosyl transferase family 2 AUC43_RS19850 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AUC43_RS19860 PF05523 WxcM-like, C-terminal AUC43_RS19865 PF16363 GDP-mannose 4,6 dehydratase AUC43_RS19870 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AUC43_RS19870 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AUC43_RS19870 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AUC43_RS19880 PF13537 Glutamine amidotransferase domain AUC43_RS19880 PF00733 Asparagine synthase AUC43_RS19890 PF01425 Amidase AUC43_RS19895 PF02913 FAD linked oxidases, C-terminal domain AUC43_RS19895 PF01565 FAD binding domain AUC43_RS19900 PF00877 NlpC/P60 family AUC43_RS19940 PF00684 DnaJ central domain AUC43_RS19940 PF01556 DnaJ C terminal domain AUC43_RS19940 PF00226 DnaJ domain AUC43_RS19955 PF00849 RNA pseudouridylate synthase AUC43_RS19955 PF01479 S4 domain AUC43_RS19980 PF05922 Peptidase inhibitor I9 AUC43_RS19980 PF00082 Subtilase family AUC43_RS19980 PF04151 Bacterial pre-peptidase C-terminal domain AUC43_RS19985 PF08305 NPCBM/NEW2 domain AUC43_RS20070 PF01541 GIY-YIG catalytic domain AUC43_RS20085 PF00753 Metallo-beta-lactamase superfamily AUC43_RS20090 PF00753 Metallo-beta-lactamase superfamily AUC43_RS20105 PF01541 GIY-YIG catalytic domain AUC43_RS20125 PF01580 FtsK/SpoIIIE family AUC43_RS20125 PF09397 Ftsk gamma domain AUC43_RS20125 PF17854 FtsK alpha domain AUC43_RS20125 PF13491 4TM region of DNA translocase FtsK/SpoIIIE AUC43_RS20130 PF01230 HIT domain AUC43_RS20190 PF10137 Predicted nucleotide-binding protein containing TIR-like domain AUC43_RS20225 PF04480 Protein of unknown function (DUF559) AUC43_RS20240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AUC43_RS20240 PF07730 Histidine kinase AUC43_RS20240 PF05231 MASE1 AUC43_RS20245 PF04480 Protein of unknown function (DUF559) AUC43_RS20260 PF05532 CsbD-like