locus-tag class description IL_RS00020 PF00308 Bacterial dnaA protein IL_RS00020 PF08299 Bacterial dnaA protein helix-turn-helix IL_RS00020 PF11638 DnaA N-terminal domain IL_RS00025 PF02767 DNA polymerase III beta subunit, central domain IL_RS00025 PF02768 DNA polymerase III beta subunit, C-terminal domain IL_RS00025 PF00712 DNA polymerase III beta subunit, N-terminal domain IL_RS00030 PF02463 RecF/RecN/SMC N terminal domain IL_RS00035 PF00204 DNA gyrase B IL_RS00035 PF01751 Toprim domain IL_RS00035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IL_RS00035 PF18053 DNA gyrase B subunit insert domain IL_RS00035 PF00986 DNA gyrase B subunit, carboxyl terminus IL_RS00040 PF02092 Glycyl-tRNA synthetase beta subunit IL_RS00040 PF05746 DALR anticodon binding domain IL_RS00045 PF02091 Glycyl-tRNA synthetase alpha subunit IL_RS00050 PF03352 Methyladenine glycosylase IL_RS00060 PF01206 Sulfurtransferase TusA IL_RS00065 PF00108 Thiolase, N-terminal domain IL_RS00065 PF02803 Thiolase, C-terminal domain IL_RS00070 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain IL_RS00070 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain IL_RS00070 PF00378 Enoyl-CoA hydratase/isomerase IL_RS00075 PF01464 Transglycosylase SLT domain IL_RS00075 PF14718 Soluble lytic murein transglycosylase L domain IL_RS00080 PF00557 Metallopeptidase family M24 IL_RS00085 PF09186 Domain of unknown function (DUF1949) IL_RS00085 PF01205 Uncharacterized protein family UPF0029 IL_RS00090 PF02080 TrkA-C domain IL_RS00090 PF02254 TrkA-N domain IL_RS00095 PF01029 NusB family IL_RS00095 PF01189 16S rRNA methyltransferase RsmB/F IL_RS00100 PF02911 Formyl transferase, C-terminal domain IL_RS00100 PF00551 Formyl transferase IL_RS00105 PF01327 Polypeptide deformylase IL_RS00110 PF02481 DNA recombination-mediator protein A IL_RS00110 PF17782 DprA winged helix domain IL_RS00115 PF04361 Protein of unknown function (DUF494) IL_RS00125 PF01300 Telomere recombination IL_RS00130 PF01218 Coproporphyrinogen III oxidase IL_RS00135 PF08501 Shikimate dehydrogenase substrate binding domain IL_RS00135 PF18317 Shikimate 5'-dehydrogenase C-terminal domain IL_RS00135 PF01488 Shikimate / quinate 5-dehydrogenase IL_RS00140 PF01612 3'-5' exonuclease IL_RS00140 PF01367 5'-3' exonuclease, C-terminal SAM fold IL_RS00140 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain IL_RS00140 PF00476 DNA polymerase family A IL_RS00145 PF00892 EamA-like transporter family IL_RS00150 PF01926 50S ribosome-binding GTPase IL_RS00155 PF00034 Cytochrome c IL_RS00160 PF04220 Der GTPase activator (YihI) IL_RS00165 PF10675 Protein of unknown function (DUF2489) IL_RS00170 PF06426 Serine acetyltransferase, N-terminal IL_RS00170 PF00132 Bacterial transferase hexapeptide (six repeats) IL_RS00175 PF08447 PAS fold IL_RS00175 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IL_RS00180 PF00313 'Cold-shock' DNA-binding domain IL_RS00185 PF00857 Isochorismatase family IL_RS00190 PF00731 AIR carboxylase IL_RS00195 PF02222 ATP-grasp domain IL_RS00195 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain IL_RS00200 PF02230 Phospholipase/Carboxylesterase IL_RS00205 PF00800 Prephenate dehydratase IL_RS00205 PF01842 ACT domain IL_RS00210 PF00326 Prolyl oligopeptidase family IL_RS00210 PF07676 WD40-like Beta Propeller Repeat IL_RS00215 PF01168 Alanine racemase, N-terminal domain IL_RS00215 PF00842 Alanine racemase, C-terminal domain IL_RS00220 PF01654 Cytochrome bd terminal oxidase subunit I IL_RS00225 PF02322 Cytochrome bd terminal oxidase subunit II IL_RS00230 PF01979 Amidohydrolase family IL_RS00235 PF00144 Beta-lactamase IL_RS00260 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region IL_RS00260 PF01872 RibD C-terminal domain IL_RS00270 PF00892 EamA-like transporter family IL_RS00275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IL_RS00275 PF03466 LysR substrate binding domain IL_RS00280 PF08281 Sigma-70, region 4 IL_RS00280 PF04542 Sigma-70 region 2 IL_RS00305 PF07804 HipA-like C-terminal domain IL_RS00305 PF13657 HipA N-terminal domain IL_RS00325 PF00873 AcrB/AcrD/AcrF family IL_RS00340 PF00085 Thioredoxin IL_RS00345 PF09335 SNARE associated Golgi protein IL_RS00360 PF02805 Metal binding domain of Ada IL_RS00360 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain IL_RS00360 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain IL_RS00360 PF12833 Helix-turn-helix domain IL_RS00365 PF16925 Tetracyclin repressor-like, C-terminal domain IL_RS00365 PF00440 Bacterial regulatory proteins, tetR family IL_RS00370 PF00171 Aldehyde dehydrogenase family IL_RS00380 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain IL_RS00380 PF00326 Prolyl oligopeptidase family IL_RS00385 PF00210 Ferritin-like domain IL_RS00390 PF00724 NADH:flavin oxidoreductase / NADH oxidase family IL_RS00410 PF02566 OsmC-like protein IL_RS00415 PF01047 MarR family IL_RS00425 PF00106 short chain dehydrogenase IL_RS00430 PF00149 Calcineurin-like phosphoesterase IL_RS00450 PF00884 Sulfatase IL_RS00455 PF01219 Prokaryotic diacylglycerol kinase IL_RS00465 PF13193 AMP-binding enzyme C-terminal domain IL_RS00465 PF00501 AMP-binding enzyme IL_RS00485 PF00486 Transcriptional regulatory protein, C terminal IL_RS00485 PF00072 Response regulator receiver domain IL_RS00490 PF00512 His Kinase A (phospho-acceptor) domain IL_RS00490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IL_RS00490 PF08521 Two-component sensor kinase N-terminal IL_RS00520 PF02333 Phytase IL_RS00525 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain IL_RS00525 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family IL_RS00530 PF00857 Isochorismatase family IL_RS00535 PF01661 Macro domain IL_RS00550 PF00141 Peroxidase IL_RS00555 PF00593 TonB dependent receptor IL_RS00555 PF07660 Secretin and TonB N terminus short domain IL_RS00555 PF07715 TonB-dependent Receptor Plug Domain IL_RS00560 PF00106 short chain dehydrogenase IL_RS00565 PF03239 Iron permease FTR1 family IL_RS00575 PF01497 Periplasmic binding protein IL_RS00580 PF01032 FecCD transport family IL_RS00585 PF00005 ABC transporter IL_RS00610 PF13439 Glycosyltransferase Family 4 IL_RS00610 PF00534 Glycosyl transferases group 1 IL_RS00620 PF03441 FAD binding domain of DNA photolyase IL_RS00620 PF00875 DNA photolyase IL_RS00625 PF16363 GDP-mannose 4,6 dehydratase IL_RS00645 PF00550 Phosphopantetheine attachment site IL_RS00650 PF00550 Phosphopantetheine attachment site IL_RS00660 PF00501 AMP-binding enzyme IL_RS00660 PF13193 AMP-binding enzyme C-terminal domain IL_RS00665 PF07977 FabA-like domain IL_RS00670 PF00535 Glycosyl transferase family 2 IL_RS00680 PF00221 Aromatic amino acid lyase IL_RS00700 PF04820 Tryptophan halogenase IL_RS00710 PF02801 Beta-ketoacyl synthase, C-terminal domain IL_RS00710 PF00109 Beta-ketoacyl synthase, N-terminal domain IL_RS00725 PF00109 Beta-ketoacyl synthase, N-terminal domain IL_RS00725 PF02801 Beta-ketoacyl synthase, C-terminal domain IL_RS00735 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain IL_RS00735 PF00326 Prolyl oligopeptidase family IL_RS00745 PF00563 EAL domain IL_RS00745 PF08668 HDOD domain IL_RS00750 PF02657 Fe-S metabolism associated domain IL_RS00755 PF01883 Iron-sulfur cluster assembly protein IL_RS00760 PF01521 Iron-sulphur cluster biosynthesis IL_RS00765 PF00266 Aminotransferase class-V IL_RS00770 PF01458 Uncharacterized protein family (UPF0051) IL_RS00775 PF00005 ABC transporter IL_RS00780 PF01458 Uncharacterized protein family (UPF0051) IL_RS00785 PF00196 Bacterial regulatory proteins, luxR family IL_RS00785 PF00072 Response regulator receiver domain IL_RS00790 PF03783 Curli production assembly/transport component CsgG IL_RS00815 PF00082 Subtilase family IL_RS00820 PF04151 Bacterial pre-peptidase C-terminal domain IL_RS00820 PF00082 Subtilase family IL_RS00830 PF01709 Transcriptional regulator IL_RS00835 PF03922 OmpW family IL_RS00840 PF00196 Bacterial regulatory proteins, luxR family IL_RS00840 PF00072 Response regulator receiver domain IL_RS00855 PF01022 Bacterial regulatory protein, arsR family IL_RS00880 PF01048 Phosphorylase superfamily IL_RS00885 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IL_RS00885 PF00672 HAMP domain IL_RS00885 PF02743 Cache domain IL_RS00890 PF00698 Acyl transferase domain IL_RS00895 PF02780 Transketolase, C-terminal domain IL_RS00895 PF02779 Transketolase, pyrimidine binding domain IL_RS00900 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IL_RS00900 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IL_RS00900 PF02770 Acyl-CoA dehydrogenase, middle domain IL_RS00905 PF00027 Cyclic nucleotide-binding domain IL_RS00905 PF13545 Crp-like helix-turn-helix domain IL_RS00910 PF12838 4Fe-4S dicluster domain IL_RS00915 PF01136 Peptidase family U32 IL_RS00915 PF16325 Peptidase family U32 C-terminal domain IL_RS00920 PF00196 Bacterial regulatory proteins, luxR family IL_RS00920 PF00072 Response regulator receiver domain IL_RS00930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IL_RS00930 PF07730 Histidine kinase IL_RS00930 PF00672 HAMP domain IL_RS00930 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term IL_RS00940 PF00115 Cytochrome C and Quinol oxidase polypeptide I IL_RS00955 PF03600 Citrate transporter IL_RS00960 PF06969 HemN C-terminal domain IL_RS00960 PF04055 Radical SAM superfamily IL_RS00965 PF02036 SCP-2 sterol transfer family IL_RS00970 PF01136 Peptidase family U32 IL_RS00975 PF01136 Peptidase family U32 IL_RS00985 PF04304 Protein of unknown function (DUF454) IL_RS00990 PF02954 Bacterial regulatory protein, Fis family IL_RS00990 PF00158 Sigma-54 interaction domain IL_RS00995 PF01814 Hemerythrin HHE cation binding domain IL_RS00995 PF04405 Domain of Unknown function (DUF542) IL_RS01000 PF01464 Transglycosylase SLT domain IL_RS01000 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain IL_RS01010 PF02254 TrkA-N domain IL_RS01010 PF02080 TrkA-C domain IL_RS01015 PF02386 Cation transport protein IL_RS01020 PF00672 HAMP domain IL_RS01020 PF02743 Cache domain IL_RS01020 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IL_RS01030 PF00817 impB/mucB/samB family IL_RS01030 PF11798 IMS family HHH motif IL_RS01030 PF11799 impB/mucB/samB family C-terminal domain IL_RS01035 PF13442 Cytochrome C oxidase, cbb3-type, subunit III IL_RS01040 PF00563 EAL domain IL_RS01040 PF03707 Bacterial signalling protein N terminal repeat IL_RS01040 PF00990 Diguanylate cyclase, GGDEF domain IL_RS01045 PF00580 UvrD/REP helicase N-terminal domain IL_RS01045 PF13361 UvrD-like helicase C-terminal domain IL_RS01050 PF04380 Membrane fusogenic activity IL_RS01055 PF00970 Oxidoreductase FAD-binding domain IL_RS01055 PF00175 Oxidoreductase NAD-binding domain IL_RS01075 PF02683 Cytochrome C biogenesis protein transmembrane region IL_RS01075 PF11412 Disulphide bond corrector protein DsbC IL_RS01075 PF00085 Thioredoxin IL_RS01085 PF01078 Magnesium chelatase, subunit ChlI IL_RS01085 PF13335 Magnesium chelatase, subunit ChlI C-terminal IL_RS01095 PF12441 CopG antitoxin of type II toxin-antitoxin system IL_RS01100 PF01212 Beta-eliminating lyase IL_RS01105 PF00291 Pyridoxal-phosphate dependent enzyme IL_RS01110 PF01053 Cys/Met metabolism PLP-dependent enzyme IL_RS01125 PF00291 Pyridoxal-phosphate dependent enzyme IL_RS01130 PF04222 Protein of unknown function (DUF416) IL_RS01145 PF02881 SRP54-type protein, helical bundle domain IL_RS01145 PF00448 SRP54-type protein, GTPase domain IL_RS01150 PF00005 ABC transporter IL_RS01155 PF18075 FtsX extracellular domain IL_RS01160 PF04542 Sigma-70 region 2 IL_RS01160 PF04545 Sigma-70, region 4 IL_RS01160 PF00140 Sigma-70 factor, region 1.2 IL_RS01165 PF04748 Divergent polysaccharide deacetylase IL_RS01170 PF01551 Peptidase family M23 IL_RS01175 PF06415 BPG-independent PGAM N-terminus (iPGM_N) IL_RS01175 PF01676 Metalloenzyme superfamily IL_RS01180 PF00581 Rhodanese-like domain IL_RS01185 PF02556 Preprotein translocase subunit SecB IL_RS01190 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus IL_RS01190 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus IL_RS01195 PF00440 Bacterial regulatory proteins, tetR family IL_RS01200 PF00692 dUTPase IL_RS01205 PF02441 Flavoprotein IL_RS01205 PF04127 DNA / pantothenate metabolism flavoprotein IL_RS01210 PF04002 RadC-like JAB domain IL_RS01215 PF00830 Ribosomal L28 family IL_RS01220 PF00471 Ribosomal protein L33 IL_RS01235 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain IL_RS01235 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain IL_RS01235 PF06827 Zinc finger found in FPG and IleRS IL_RS01240 PF00561 alpha/beta hydrolase fold IL_RS01250 PF01106 NifU-like domain IL_RS01250 PF01521 Iron-sulphur cluster biosynthesis IL_RS01260 PF01554 MatE IL_RS01265 PF01522 Polysaccharide deacetylase IL_RS01270 PF02630 SCO1/SenC IL_RS01275 PF01040 UbiA prenyltransferase family IL_RS01280 PF02628 Cytochrome oxidase assembly protein IL_RS01300 PF00510 Cytochrome c oxidase subunit III IL_RS01305 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 IL_RS01310 PF00115 Cytochrome C and Quinol oxidase polypeptide I IL_RS01315 PF02790 Cytochrome C oxidase subunit II, transmembrane domain IL_RS01315 PF00116 Cytochrome C oxidase subunit II, periplasmic domain IL_RS01325 PF00717 Peptidase S24-like IL_RS01325 PF01726 LexA DNA binding domain IL_RS01330 PF01553 Acyltransferase IL_RS01335 PF01040 UbiA prenyltransferase family IL_RS01340 PF04345 Chorismate lyase IL_RS01350 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease IL_RS01350 PF01694 Rhomboid family IL_RS01355 PF00581 Rhodanese-like domain IL_RS01360 PF00107 Zinc-binding dehydrogenase IL_RS01360 PF08240 Alcohol dehydrogenase GroES-like domain IL_RS01365 PF00155 Aminotransferase class I and II IL_RS01370 PF01467 Cytidylyltransferase-like IL_RS01375 PF00209 Sodium:neurotransmitter symporter family IL_RS01380 PF01293 Phosphoenolpyruvate carboxykinase IL_RS01385 PF13732 Domain of unknown function (DUF4162) IL_RS01385 PF00005 ABC transporter IL_RS01395 PF07676 WD40-like Beta Propeller Repeat IL_RS01395 PF00326 Prolyl oligopeptidase family IL_RS01400 PF00440 Bacterial regulatory proteins, tetR family IL_RS01420 PF17674 HHH domain IL_RS01420 PF09371 Tex-like protein N-terminal domain IL_RS01420 PF16921 Tex protein YqgF-like domain IL_RS01420 PF00575 S1 RNA binding domain IL_RS01425 PF01272 Transcription elongation factor, GreA/GreB, C-term IL_RS01425 PF03449 Transcription elongation factor, N-terminal IL_RS01440 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system IL_RS01445 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system IL_RS01480 PF00781 Diacylglycerol kinase catalytic domain IL_RS01490 PF07694 5TMR of 5TMR-LYT IL_RS01490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IL_RS01490 PF06580 Histidine kinase IL_RS01495 PF00072 Response regulator receiver domain IL_RS01495 PF04397 LytTr DNA-binding domain IL_RS01505 PF00990 Diguanylate cyclase, GGDEF domain IL_RS01505 PF17158 Membrane-associated sensor, integral membrane domain IL_RS01515 PF03099 Biotin/lipoate A/B protein ligase family IL_RS01540 PF00293 NUDIX domain IL_RS01545 PF00392 Bacterial regulatory proteins, gntR family IL_RS01545 PF07729 FCD domain IL_RS01555 PF04073 Aminoacyl-tRNA editing domain IL_RS01565 PF01979 Amidohydrolase family IL_RS01565 PF13382 Adenine deaminase C-terminal domain IL_RS01575 PF00005 ABC transporter IL_RS01580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IL_RS01580 PF07730 Histidine kinase IL_RS01585 PF00196 Bacterial regulatory proteins, luxR family IL_RS01585 PF00072 Response regulator receiver domain IL_RS01590 PF16884 N-terminal domain of oxidoreductase IL_RS01590 PF00107 Zinc-binding dehydrogenase IL_RS01605 PF00990 Diguanylate cyclase, GGDEF domain IL_RS01605 PF00563 EAL domain IL_RS01605 PF03707 Bacterial signalling protein N terminal repeat IL_RS01615 PF00486 Transcriptional regulatory protein, C terminal IL_RS01615 PF00072 Response regulator receiver domain IL_RS01620 PF00672 HAMP domain IL_RS01620 PF00512 His Kinase A (phospho-acceptor) domain IL_RS01620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IL_RS01625 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IL_RS01625 PF07992 Pyridine nucleotide-disulphide oxidoreductase IL_RS01630 PF00293 NUDIX domain IL_RS01635 PF00459 Inositol monophosphatase family IL_RS01640 PF06794 Uncharacterised protein family (UPF0270) IL_RS01645 PF12848 ABC transporter IL_RS01645 PF00005 ABC transporter IL_RS01650 PF09526 Probable metal-binding protein (DUF2387) IL_RS01655 PF01256 Carbohydrate kinase IL_RS01655 PF03853 YjeF-related protein N-terminus IL_RS01660 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE IL_RS01665 PF01520 N-acetylmuramoyl-L-alanine amidase IL_RS01670 PF08676 MutL C terminal dimerisation domain IL_RS01670 PF01119 DNA mismatch repair protein, C-terminal domain IL_RS01680 PF17209 Hfq protein IL_RS01685 PF01926 50S ribosome-binding GTPase IL_RS01685 PF16360 GTP-binding GTPase Middle Region IL_RS01685 PF13167 GTP-binding GTPase N-terminal IL_RS01690 PF12221 Bacterial membrane protein N terminal IL_RS01690 PF01145 SPFH domain / Band 7 family IL_RS01695 PF01145 SPFH domain / Band 7 family IL_RS01700 PF00709 Adenylosuccinate synthetase IL_RS01725 PF03143 Elongation factor Tu C-terminal domain IL_RS01725 PF00009 Elongation factor Tu GTP binding domain IL_RS01725 PF03144 Elongation factor Tu domain 2 IL_RS01735 PF00584 SecE/Sec61-gamma subunits of protein translocation complex IL_RS01740 PF00467 KOW motif IL_RS01740 PF02357 Transcription termination factor nusG IL_RS01745 PF03946 Ribosomal protein L11, N-terminal domain IL_RS01745 PF00298 Ribosomal protein L11, RNA binding domain IL_RS01750 PF00687 Ribosomal protein L1p/L10e family IL_RS01755 PF00466 Ribosomal protein L10 IL_RS01760 PF16320 Ribosomal protein L7/L12 dimerisation domain IL_RS01760 PF00542 Ribosomal protein L7/L12 C-terminal domain IL_RS01765 PF00562 RNA polymerase Rpb2, domain 6 IL_RS01765 PF04563 RNA polymerase beta subunit IL_RS01765 PF04561 RNA polymerase Rpb2, domain 2 IL_RS01765 PF10385 RNA polymerase beta subunit external 1 domain IL_RS01765 PF04565 RNA polymerase Rpb2, domain 3 IL_RS01765 PF04560 RNA polymerase Rpb2, domain 7 IL_RS01770 PF00623 RNA polymerase Rpb1, domain 2 IL_RS01770 PF04998 RNA polymerase Rpb1, domain 5 IL_RS01770 PF05000 RNA polymerase Rpb1, domain 4 IL_RS01770 PF04983 RNA polymerase Rpb1, domain 3 IL_RS01770 PF04997 RNA polymerase Rpb1, domain 1 IL_RS01775 PF00164 Ribosomal protein S12/S23 IL_RS01780 PF00177 Ribosomal protein S7p/S5e IL_RS01785 PF03144 Elongation factor Tu domain 2 IL_RS01785 PF00009 Elongation factor Tu GTP binding domain IL_RS01785 PF03764 Elongation factor G, domain IV IL_RS01785 PF14492 Elongation Factor G, domain II IL_RS01785 PF00679 Elongation factor G C-terminus IL_RS01790 PF03143 Elongation factor Tu C-terminal domain IL_RS01790 PF03144 Elongation factor Tu domain 2 IL_RS01790 PF00009 Elongation factor Tu GTP binding domain IL_RS01800 PF04960 Glutaminase IL_RS01810 PF17755 UvrA DNA-binding domain IL_RS01810 PF00005 ABC transporter IL_RS01810 PF17760 UvrA interaction domain IL_RS01815 PF07690 Major Facilitator Superfamily IL_RS01820 PF00436 Single-strand binding protein family IL_RS01830 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IL_RS01830 PF00529 HlyD membrane-fusion protein of T1SS IL_RS01840 PF00962 Adenosine/AMP deaminase IL_RS01845 PF00265 Thymidine kinase IL_RS01850 PF01979 Amidohydrolase family IL_RS01875 PF00263 Bacterial type II and III secretion system protein IL_RS01875 PF03958 Bacterial type II/III secretion system short domain IL_RS01880 PF01471 Putative peptidoglycan binding domain IL_RS01880 PF13401 AAA domain IL_RS01890 PF00437 Type II/IV secretion system protein IL_RS01890 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain IL_RS01895 PF00482 Type II secretion system (T2SS), protein F IL_RS01905 PF07963 Prokaryotic N-terminal methylation motif IL_RS01915 PF07963 Prokaryotic N-terminal methylation motif IL_RS01915 PF00114 Pilin (bacterial filament) IL_RS01940 PF03781 Sulfatase-modifying factor enzyme 1 IL_RS01950 PF04085 rod shape-determining protein MreC IL_RS01955 PF04093 rod shape-determining protein MreD IL_RS01960 PF02545 Maf-like protein IL_RS01965 PF10150 Ribonuclease E/G family IL_RS01965 PF00575 S1 RNA binding domain IL_RS01975 PF00795 Carbon-nitrogen hydrolase IL_RS01980 PF01523 Putative modulator of DNA gyrase IL_RS01985 PF04751 Protein of unknown function (DUF615) IL_RS01990 PF01523 Putative modulator of DNA gyrase IL_RS01995 PF01769 Divalent cation transporter IL_RS01995 PF00571 CBS domain IL_RS01995 PF03448 MgtE intracellular N domain IL_RS02000 PF00381 PTS HPr component phosphorylation site IL_RS02005 PF03668 P-loop ATPase protein family IL_RS02010 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 IL_RS02015 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein IL_RS02020 PF00309 Sigma-54 factor, Activator interacting domain (AID) IL_RS02020 PF04963 Sigma-54 factor, core binding domain IL_RS02020 PF04552 Sigma-54, DNA binding domain IL_RS02025 PF12399 Branched-chain amino acid ATP-binding cassette transporter IL_RS02025 PF00005 ABC transporter IL_RS02030 PF03968 OstA-like protein IL_RS02045 PF01380 SIS domain IL_RS02045 PF00571 CBS domain IL_RS02055 PF00005 ABC transporter IL_RS02060 PF02405 Permease MlaE IL_RS02065 PF02470 MlaD protein IL_RS02070 PF05494 MlaC protein IL_RS02080 PF01722 BolA-like protein IL_RS02085 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) IL_RS02090 PF13180 PDZ domain IL_RS02095 PF00595 PDZ domain IL_RS02095 PF13180 PDZ domain IL_RS02105 PF03969 AFG1-like ATPase IL_RS02110 PF00572 Ribosomal protein L13 IL_RS02115 PF00380 Ribosomal protein S9/S16 IL_RS02120 PF00355 Rieske [2Fe-2S] domain IL_RS02120 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal IL_RS02125 PF00032 Cytochrome b(C-terminal)/b6/petD IL_RS02125 PF00033 Cytochrome b/b6/petB IL_RS02130 PF02167 Cytochrome C1 family IL_RS02135 PF00043 Glutathione S-transferase, C-terminal domain IL_RS02135 PF02798 Glutathione S-transferase, N-terminal domain IL_RS02140 PF04386 Stringent starvation protein B IL_RS02145 PF04972 BON domain IL_RS02150 PF13580 SIS domain IL_RS02155 PF02021 Uncharacterised protein family UPF0102 IL_RS02160 PF04348 LppC putative lipoprotein IL_RS02165 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases IL_RS02170 PF03707 Bacterial signalling protein N terminal repeat IL_RS02170 PF00990 Diguanylate cyclase, GGDEF domain IL_RS02170 PF00563 EAL domain IL_RS02175 PF02381 MraZ protein, putative antitoxin-like IL_RS02180 PF01795 MraW methylase family IL_RS02185 PF04999 Cell division protein FtsL IL_RS02190 PF00905 Penicillin binding protein transpeptidase domain IL_RS02190 PF03717 Penicillin-binding Protein dimerisation domain IL_RS02195 PF08245 Mur ligase middle domain IL_RS02195 PF01225 Mur ligase family, catalytic domain IL_RS02195 PF02875 Mur ligase family, glutamate ligase domain IL_RS02200 PF02875 Mur ligase family, glutamate ligase domain IL_RS02200 PF08245 Mur ligase middle domain IL_RS02200 PF01225 Mur ligase family, catalytic domain IL_RS02205 PF00953 Glycosyl transferase family 4 IL_RS02205 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 IL_RS02210 PF02875 Mur ligase family, glutamate ligase domain IL_RS02210 PF08245 Mur ligase middle domain IL_RS02215 PF01098 Cell cycle protein IL_RS02220 PF04101 Glycosyltransferase family 28 C-terminal domain IL_RS02220 PF03033 Glycosyltransferase family 28 N-terminal domain IL_RS02225 PF01225 Mur ligase family, catalytic domain IL_RS02225 PF02875 Mur ligase family, glutamate ligase domain IL_RS02225 PF08245 Mur ligase middle domain IL_RS02230 PF07478 D-ala D-ala ligase C-terminus IL_RS02230 PF01820 D-ala D-ala ligase N-terminus IL_RS02235 PF03799 Cell division protein FtsQ IL_RS02235 PF08478 POTRA domain, FtsQ-type IL_RS02240 PF02491 SHS2 domain inserted in FTSA IL_RS02245 PF00091 Tubulin/FtsZ family, GTPase domain IL_RS02245 PF12327 FtsZ family, C-terminal domain IL_RS02250 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase IL_RS02260 PF01551 Peptidase family M23 IL_RS02260 PF01476 LysM domain IL_RS02260 PF08525 Opacity-associated protein A N-terminal motif IL_RS02265 PF07516 SecA Wing and Scaffold domain IL_RS02265 PF07517 SecA DEAD-like domain IL_RS02265 PF02810 SEC-C motif IL_RS02265 PF01043 SecA preprotein cross-linking domain IL_RS02270 PF00293 NUDIX domain IL_RS02275 PF03884 DNA gyrase inhibitor YacG IL_RS02280 PF07072 Cell division protein IL_RS02285 PF01121 Dephospho-CoA kinase IL_RS02290 PF06750 Bacterial Peptidase A24 N-terminal domain IL_RS02290 PF01478 Type IV leader peptidase family IL_RS02295 PF00482 Type II secretion system (T2SS), protein F IL_RS02300 PF00437 Type II/IV secretion system protein IL_RS02300 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain IL_RS02305 PF07963 Prokaryotic N-terminal methylation motif IL_RS02305 PF00114 Pilin (bacterial filament) IL_RS02310 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain IL_RS02310 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain IL_RS02315 PF01510 N-acetylmuramoyl-L-alanine amidase IL_RS02320 PF17113 Regulatory signalling modulator protein AmpE IL_RS02325 PF07729 FCD domain IL_RS02325 PF00392 Bacterial regulatory proteins, gntR family IL_RS02330 PF17831 Pyruvate dehydrogenase E1 component middle domain IL_RS02330 PF00456 Transketolase, thiamine diphosphate binding domain IL_RS02335 PF02817 e3 binding domain IL_RS02335 PF00364 Biotin-requiring enzyme IL_RS02335 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) IL_RS02340 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IL_RS02340 PF07992 Pyridine nucleotide-disulphide oxidoreductase IL_RS02345 PF05649 Peptidase family M13 IL_RS02345 PF01431 Peptidase family M13 IL_RS02350 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IL_RS02355 PF00873 AcrB/AcrD/AcrF family IL_RS02365 PF13533 Biotin-lipoyl like IL_RS02370 PF00873 AcrB/AcrD/AcrF family IL_RS02375 PF00330 Aconitase family (aconitate hydratase) IL_RS02375 PF06434 Aconitate hydratase 2 N-terminus IL_RS02375 PF11791 Aconitate B N-terminal domain IL_RS02385 PF04261 Dyp-type peroxidase family IL_RS02390 PF01316 Arginine repressor, DNA binding domain IL_RS02390 PF02863 Arginine repressor, C-terminal domain IL_RS02395 PF00056 lactate/malate dehydrogenase, NAD binding domain IL_RS02395 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain IL_RS02405 PF02371 Transposase IS116/IS110/IS902 family IL_RS02405 PF01548 Transposase IL_RS02410 PF00348 Polyprenyl synthetase IL_RS02415 PF00829 Ribosomal prokaryotic L21 protein IL_RS02420 PF01016 Ribosomal L27 protein IL_RS02425 PF01926 50S ribosome-binding GTPase IL_RS02425 PF01018 GTP1/OBG IL_RS02430 PF00186 Dihydrofolate reductase IL_RS02440 PF00561 alpha/beta hydrolase fold IL_RS02445 PF00005 ABC transporter IL_RS02450 PF12679 ABC-2 family transporter protein IL_RS02455 PF01266 FAD dependent oxidoreductase IL_RS02465 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain IL_RS02465 PF05221 S-adenosyl-L-homocysteine hydrolase IL_RS02470 PF00294 pfkB family carbohydrate kinase IL_RS02485 PF02649 Type I GTP cyclohydrolase folE2 IL_RS02495 PF00486 Transcriptional regulatory protein, C terminal IL_RS02495 PF00072 Response regulator receiver domain IL_RS02500 PF02743 Cache domain IL_RS02500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IL_RS02500 PF00512 His Kinase A (phospho-acceptor) domain IL_RS02505 PF05175 Methyltransferase small domain IL_RS02505 PF08468 Methyltransferase small domain N-terminal IL_RS02525 PF08443 RimK-like ATP-grasp domain IL_RS02525 PF18030 RimK PreATP-grasp domain IL_RS02530 PF08443 RimK-like ATP-grasp domain IL_RS02530 PF18030 RimK PreATP-grasp domain IL_RS02535 PF02371 Transposase IS116/IS110/IS902 family IL_RS02535 PF01548 Transposase IL_RS02540 PF08495 FIST N domain IL_RS02540 PF00563 EAL domain IL_RS02540 PF10442 FIST C domain IL_RS02540 PF00990 Diguanylate cyclase, GGDEF domain IL_RS02550 PF02976 DNA mismatch repair enzyme MutH IL_RS02555 PF00293 NUDIX domain IL_RS02560 PF05524 PEP-utilising enzyme, N-terminal IL_RS02560 PF01590 GAF domain IL_RS02560 PF00391 PEP-utilising enzyme, mobile domain IL_RS02560 PF02896 PEP-utilising enzyme, TIM barrel domain IL_RS02565 PF01925 Sulfite exporter TauE/SafE IL_RS02570 PF01790 Prolipoprotein diacylglyceryl transferase IL_RS02575 PF00303 Thymidylate synthase IL_RS02580 PF01797 Transposase IS200 like IL_RS02590 PF00072 Response regulator receiver domain IL_RS02600 PF00899 ThiF family IL_RS02605 PF02657 Fe-S metabolism associated domain IL_RS02610 PF01012 Electron transfer flavoprotein domain IL_RS02615 PF01012 Electron transfer flavoprotein domain IL_RS02615 PF00766 Electron transfer flavoprotein FAD-binding domain IL_RS02625 PF00326 Prolyl oligopeptidase family IL_RS02625 PF07676 WD40-like Beta Propeller Repeat IL_RS02630 PF02348 Cytidylyltransferase IL_RS02635 PF08666 SAF domain IL_RS02635 PF03102 NeuB family IL_RS02640 PF02350 UDP-N-acetylglucosamine 2-epimerase IL_RS02650 PF03167 Uracil DNA glycosylase superfamily IL_RS02655 PF03466 LysR substrate binding domain IL_RS02655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IL_RS02660 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus IL_RS02660 PF00361 Proton-conducting membrane transporter IL_RS02660 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus IL_RS02665 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) IL_RS02690 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain IL_RS02690 PF10996 Beta-Casp domain IL_RS02690 PF00753 Metallo-beta-lactamase superfamily IL_RS02710 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal IL_RS02710 PF01926 50S ribosome-binding GTPase IL_RS02720 PF13099 Domain of unknown function (DUF3944) IL_RS02720 PF03981 Ubiquinol-cytochrome C chaperone IL_RS02725 PF01590 GAF domain IL_RS02725 PF00158 Sigma-54 interaction domain IL_RS02730 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain IL_RS02730 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain IL_RS02730 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain IL_RS02740 PF00005 ABC transporter IL_RS02740 PF00664 ABC transporter transmembrane region IL_RS02745 PF16363 GDP-mannose 4,6 dehydratase IL_RS02750 PF00483 Nucleotidyl transferase IL_RS02755 PF00132 Bacterial transferase hexapeptide (six repeats) IL_RS02765 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family IL_RS02775 PF00132 Bacterial transferase hexapeptide (six repeats) IL_RS02780 PF02719 Polysaccharide biosynthesis protein IL_RS02785 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family IL_RS02790 PF02350 UDP-N-acetylglucosamine 2-epimerase IL_RS02795 PF08666 SAF domain IL_RS02795 PF03102 NeuB family IL_RS02805 PF00483 Nucleotidyl transferase IL_RS02810 PF02348 Cytidylyltransferase IL_RS02820 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain IL_RS02820 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain IL_RS02820 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain IL_RS02825 PF00535 Glycosyl transferase family 2 IL_RS02830 PF00534 Glycosyl transferases group 1 IL_RS02830 PF13439 Glycosyltransferase Family 4 IL_RS02835 PF16363 GDP-mannose 4,6 dehydratase IL_RS02850 PF01370 NAD dependent epimerase/dehydratase family IL_RS02855 PF02397 Bacterial sugar transferase IL_RS02860 PF01370 NAD dependent epimerase/dehydratase family IL_RS02865 PF02563 Polysaccharide biosynthesis/export protein IL_RS02865 PF10531 SLBB domain IL_RS02880 PF06082 Exopolysaccharide biosynthesis protein YbjH IL_RS02885 PF02719 Polysaccharide biosynthesis protein IL_RS02890 PF00342 Phosphoglucose isomerase IL_RS02905 PF00459 Inositol monophosphatase family IL_RS02910 PF02371 Transposase IS116/IS110/IS902 family IL_RS02910 PF01548 Transposase IL_RS02930 PF00571 CBS domain IL_RS02930 PF00478 IMP dehydrogenase / GMP reductase domain IL_RS02935 PF00958 GMP synthase C terminal domain IL_RS02935 PF02540 NAD synthase IL_RS02935 PF00117 Glutamine amidotransferase class-I IL_RS02950 PF00593 TonB dependent receptor IL_RS02960 PF03553 Na+/H+ antiporter family IL_RS02965 PF14437 MafB19-like deaminase IL_RS02970 PF01546 Peptidase family M20/M25/M40 IL_RS02970 PF07687 Peptidase dimerisation domain IL_RS02975 PF01464 Transglycosylase SLT domain IL_RS02975 PF00497 Bacterial extracellular solute-binding proteins, family 3 IL_RS02980 PF01548 Transposase IL_RS02980 PF02371 Transposase IS116/IS110/IS902 family IL_RS02995 PF02769 AIR synthase related protein, C-terminal domain IL_RS02995 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain IL_RS02995 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal IL_RS03005 PF05973 Phage derived protein Gp49-like (DUF891) IL_RS03010 PF12706 Beta-lactamase superfamily domain IL_RS03010 PF00753 Metallo-beta-lactamase superfamily IL_RS03020 PF00403 Heavy-metal-associated domain IL_RS03025 PF01177 Asp/Glu/Hydantoin racemase IL_RS03030 PF00390 Malic enzyme, N-terminal domain IL_RS03030 PF03949 Malic enzyme, NAD binding domain IL_RS03035 PF01053 Cys/Met metabolism PLP-dependent enzyme IL_RS03040 PF00127 Copper binding proteins, plastocyanin/azurin family IL_RS03050 PF00873 AcrB/AcrD/AcrF family IL_RS03060 PF00512 His Kinase A (phospho-acceptor) domain IL_RS03060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IL_RS03060 PF00497 Bacterial extracellular solute-binding proteins, family 3 IL_RS03065 PF07676 WD40-like Beta Propeller Repeat IL_RS03065 PF00326 Prolyl oligopeptidase family IL_RS03070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IL_RS03070 PF03466 LysR substrate binding domain IL_RS03075 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) IL_RS03080 PF00463 Isocitrate lyase family IL_RS03085 PF01274 Malate synthase IL_RS03090 PF12729 Four helix bundle sensory module for signal transduction IL_RS03090 PF00672 HAMP domain IL_RS03090 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IL_RS03095 PF01546 Peptidase family M20/M25/M40 IL_RS03095 PF07687 Peptidase dimerisation domain IL_RS03100 PF02774 Semialdehyde dehydrogenase, dimerisation domain IL_RS03100 PF01118 Semialdehyde dehydrogenase, NAD binding domain IL_RS03105 PF00696 Amino acid kinase family IL_RS03110 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain IL_RS03110 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain IL_RS03115 PF00764 Arginosuccinate synthase IL_RS03120 PF14698 Argininosuccinate lyase C-terminal IL_RS03120 PF00206 Lyase IL_RS03120 PF00583 Acetyltransferase (GNAT) family IL_RS03125 PF00753 Metallo-beta-lactamase superfamily IL_RS03145 PF00924 Mechanosensitive ion channel IL_RS03145 PF12795 Mechanosensitive ion channel porin domain IL_RS03145 PF12794 Mechanosensitive ion channel inner membrane domain 1 IL_RS03150 PF00005 ABC transporter IL_RS03150 PF12848 ABC transporter IL_RS03155 PF02798 Glutathione S-transferase, N-terminal domain IL_RS03155 PF00043 Glutathione S-transferase, C-terminal domain IL_RS03170 PF03601 Conserved hypothetical protein 698 IL_RS03175 PF03466 LysR substrate binding domain IL_RS03175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IL_RS03180 PF01272 Transcription elongation factor, GreA/GreB, C-term IL_RS03180 PF03449 Transcription elongation factor, N-terminal IL_RS03185 PF14760 Rnk N-terminus IL_RS03185 PF01272 Transcription elongation factor, GreA/GreB, C-term IL_RS03190 PF01321 Creatinase/Prolidase N-terminal domain IL_RS03190 PF00557 Metallopeptidase family M24 IL_RS03195 PF13411 MerR HTH family regulatory protein IL_RS03205 PF01252 Signal peptidase (SPase) II IL_RS03220 PF04002 RadC-like JAB domain IL_RS03230 PF04002 RadC-like JAB domain IL_RS03250 PF02384 N-6 DNA Methylase IL_RS03270 PF00589 Phage integrase family IL_RS03295 PF13356 Arm DNA-binding domain IL_RS03295 PF00589 Phage integrase family IL_RS03315 PF01066 CDP-alcohol phosphatidyltransferase IL_RS03320 PF08459 UvrC Helix-hairpin-helix N-terminal IL_RS03320 PF02151 UvrB/uvrC motif IL_RS03320 PF01541 GIY-YIG catalytic domain IL_RS03325 PF00072 Response regulator receiver domain IL_RS03325 PF00196 Bacterial regulatory proteins, luxR family IL_RS03350 PF01027 Inhibitor of apoptosis-promoting Bax1 IL_RS03355 PF02635 DsrE/DsrF-like family IL_RS03370 PF04358 DsrC like protein IL_RS03375 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) IL_RS03375 PF02403 Seryl-tRNA synthetase N-terminal domain IL_RS03380 PF02537 CrcB-like protein, Camphor Resistance (CrcB) IL_RS03385 PF12002 MgsA AAA+ ATPase C terminal IL_RS03385 PF16193 AAA C-terminal domain IL_RS03385 PF00004 ATPase family associated with various cellular activities (AAA) IL_RS03390 PF03548 Outer membrane lipoprotein carrier protein LolA IL_RS03395 PF13491 4TM region of DNA translocase FtsK/SpoIIIE IL_RS03395 PF17854 FtsK alpha domain IL_RS03395 PF09397 Ftsk gamma domain IL_RS03395 PF01580 FtsK/SpoIIIE family IL_RS03400 PF01037 Lrp/AsnC ligand binding domain IL_RS03405 PF01262 Alanine dehydrogenase/PNT, C-terminal domain IL_RS03405 PF05222 Alanine dehydrogenase/PNT, N-terminal domain IL_RS03410 PF07992 Pyridine nucleotide-disulphide oxidoreductase IL_RS03415 PF03588 Leucyl/phenylalanyl-tRNA protein transferase IL_RS03420 PF04376 Arginine-tRNA-protein transferase, N terminus IL_RS03420 PF04377 Arginine-tRNA-protein transferase, C terminus IL_RS03425 PF01176 Translation initiation factor 1A / IF-1 IL_RS03430 PF17871 AAA lid domain IL_RS03430 PF07724 AAA domain (Cdc48 subfamily) IL_RS03430 PF10431 C-terminal, D2-small domain, of ClpB protein IL_RS03430 PF02861 Clp amino terminal domain, pathogenicity island component IL_RS03430 PF00004 ATPase family associated with various cellular activities (AAA) IL_RS03435 PF02617 ATP-dependent Clp protease adaptor protein ClpS IL_RS03440 PF00313 'Cold-shock' DNA-binding domain IL_RS03445 PF04245 37-kD nucleoid-associated bacterial protein IL_RS03450 PF11893 Domain of unknown function (DUF3413) IL_RS03450 PF00884 Sulfatase IL_RS03515 PF00296 Luciferase-like monooxygenase IL_RS03520 PF00106 short chain dehydrogenase IL_RS03525 PF16925 Tetracyclin repressor-like, C-terminal domain IL_RS03525 PF00440 Bacterial regulatory proteins, tetR family IL_RS03530 PF03590 Aspartate-ammonia ligase IL_RS03535 PF01037 Lrp/AsnC ligand binding domain IL_RS03550 PF13722 5TM C-terminal transporter carbon starvation CstA IL_RS03550 PF02554 Carbon starvation protein CstA IL_RS03560 PF02374 Anion-transporting ATPase IL_RS03565 PF00107 Zinc-binding dehydrogenase IL_RS03565 PF08240 Alcohol dehydrogenase GroES-like domain IL_RS03570 PF00529 HlyD membrane-fusion protein of T1SS IL_RS03570 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IL_RS03575 PF00873 AcrB/AcrD/AcrF family IL_RS03600 PF02696 Uncharacterized ACR, YdiU/UPF0061 family IL_RS03605 PF01933 Uncharacterised protein family UPF0052 IL_RS03610 PF00692 dUTPase IL_RS03615 PF10609 NUBPL iron-transfer P-loop NTPase IL_RS03620 PF01588 Putative tRNA binding domain IL_RS03620 PF09334 tRNA synthetases class I (M) IL_RS03635 PF01230 HIT domain IL_RS03660 PF14497 Glutathione S-transferase, C-terminal domain IL_RS03660 PF02798 Glutathione S-transferase, N-terminal domain IL_RS03670 PF04209 homogentisate 1,2-dioxygenase IL_RS03675 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IL_RS03680 PF18024 Helix-turn-helix domain IL_RS03680 PF00158 Sigma-54 interaction domain IL_RS03685 PF01329 Pterin 4 alpha carbinolamine dehydratase IL_RS03690 PF00351 Biopterin-dependent aromatic amino acid hydroxylase IL_RS03695 PF01053 Cys/Met metabolism PLP-dependent enzyme IL_RS03700 PF05128 Domain of unknown function (DUF697) IL_RS03705 PF04317 YcjX-like family, DUF463 IL_RS03715 PF06667 Phage shock protein B IL_RS03720 PF04012 PspA/IM30 family IL_RS03725 PF02954 Bacterial regulatory protein, Fis family IL_RS03725 PF00158 Sigma-54 interaction domain IL_RS03730 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IL_RS03735 PF00528 Binding-protein-dependent transport system inner membrane component IL_RS03740 PF00528 Binding-protein-dependent transport system inner membrane component IL_RS03740 PF12911 N-terminal TM domain of oligopeptide transport permease C IL_RS03745 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IL_RS03745 PF00005 ABC transporter IL_RS03750 PF00005 ABC transporter IL_RS03755 PF00474 Sodium:solute symporter family IL_RS03765 PF01734 Patatin-like phospholipase IL_RS03770 PF01966 HD domain IL_RS03770 PF13286 Phosphohydrolase-associated domain IL_RS03775 PF00154 recA bacterial DNA recombination protein IL_RS03780 PF02464 Competence-damaged protein IL_RS03785 PF00488 MutS domain V IL_RS03785 PF05188 MutS domain II IL_RS03785 PF05190 MutS family domain IV IL_RS03785 PF01624 MutS domain I IL_RS03785 PF05192 MutS domain III IL_RS03790 PF00140 Sigma-70 factor, region 1.2 IL_RS03790 PF04542 Sigma-70 region 2 IL_RS03790 PF04539 Sigma-70 region 3 IL_RS03790 PF04545 Sigma-70, region 4 IL_RS03795 PF01476 LysM domain IL_RS03795 PF01551 Peptidase family M23 IL_RS03800 PF09335 SNARE associated Golgi protein IL_RS03810 PF01975 Survival protein SurE IL_RS03815 PF01142 tRNA pseudouridine synthase D (TruD) IL_RS03820 PF02542 YgbB family IL_RS03825 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase IL_RS03830 PF04977 Septum formation initiator IL_RS03840 PF00563 EAL domain IL_RS03840 PF00990 Diguanylate cyclase, GGDEF domain IL_RS03840 PF03707 Bacterial signalling protein N terminal repeat IL_RS03845 PF01258 Prokaryotic dksA/traR C4-type zinc finger IL_RS03860 PF13640 2OG-Fe(II) oxygenase superfamily IL_RS03860 PF18331 PKHD-type hydroxylase C-terminal domain IL_RS03870 PF00034 Cytochrome c IL_RS03890 PF01964 Radical SAM ThiC family IL_RS03890 PF13667 ThiC-associated domain IL_RS03895 PF02581 Thiamine monophosphate synthase IL_RS03900 PF00899 ThiF family IL_RS03905 PF02597 ThiS family IL_RS03910 PF05690 Thiazole biosynthesis protein ThiG IL_RS03915 PF04055 Radical SAM superfamily IL_RS03915 PF06968 Biotin and Thiamin Synthesis associated domain IL_RS03925 PF00113 Enolase, C-terminal TIM barrel domain IL_RS03925 PF03952 Enolase, N-terminal domain IL_RS03930 PF00117 Glutamine amidotransferase class-I IL_RS03930 PF06418 CTP synthase N-terminus IL_RS03950 PF00873 AcrB/AcrD/AcrF family IL_RS03955 PF00529 HlyD membrane-fusion protein of T1SS IL_RS03955 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IL_RS04010 PF07883 Cupin domain IL_RS04020 PF01011 PQQ enzyme repeat IL_RS04030 PF00106 short chain dehydrogenase IL_RS04040 PF07715 TonB-dependent Receptor Plug Domain IL_RS04040 PF07660 Secretin and TonB N terminus short domain IL_RS04040 PF00593 TonB dependent receptor IL_RS04045 PF00465 Iron-containing alcohol dehydrogenase IL_RS04055 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain IL_RS04055 PF02777 Iron/manganese superoxide dismutases, C-terminal domain IL_RS04060 PF02535 ZIP Zinc transporter IL_RS04090 PF03819 MazG nucleotide pyrophosphohydrolase domain IL_RS04095 PF04607 Region found in RelA / SpoT proteins IL_RS04095 PF13291 ACT domain IL_RS04095 PF02824 TGS domain IL_RS04100 PF05958 tRNA (Uracil-5-)-methyltransferase IL_RS04105 PF01648 4'-phosphopantetheinyl transferase superfamily IL_RS04110 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ IL_RS04115 PF11967 Recombination protein O N terminal IL_RS04115 PF02565 Recombination protein O C terminal IL_RS04120 PF01926 50S ribosome-binding GTPase IL_RS04120 PF07650 KH domain IL_RS04125 PF00035 Double-stranded RNA binding motif IL_RS04125 PF14622 Ribonuclease-III-like IL_RS04130 PF10502 Signal peptidase, peptidase S26 IL_RS04135 PF00679 Elongation factor G C-terminus IL_RS04135 PF00009 Elongation factor Tu GTP binding domain IL_RS04135 PF06421 GTP-binding protein LepA C-terminus IL_RS04145 PF17188 MucB/RseB C-terminal domain IL_RS04145 PF03888 MucB/RseB N-terminal domain IL_RS04155 PF08281 Sigma-70, region 4 IL_RS04155 PF04542 Sigma-70 region 2 IL_RS04160 PF00890 FAD binding domain IL_RS04160 PF02910 Fumarate reductase flavoprotein C-term IL_RS04170 PF03937 Flavinator of succinate dehydrogenase IL_RS04180 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IL_RS04185 PF01336 OB-fold nucleic acid binding domain IL_RS04185 PF00152 tRNA synthetases class II (D, K and N) IL_RS04190 PF00472 RF-1 domain IL_RS04190 PF03462 PCRF domain IL_RS04195 PF17768 RecJ OB domain IL_RS04195 PF02272 DHHA1 domain IL_RS04195 PF01368 DHH family IL_RS04200 PF13098 Thioredoxin-like domain IL_RS04200 PF10411 Disulfide bond isomerase protein N-terminus IL_RS04205 PF00589 Phage integrase family IL_RS04205 PF02899 Phage integrase, N-terminal SAM-like domain IL_RS04220 PF14765 Polyketide synthase dehydratase IL_RS04220 PF00698 Acyl transferase domain IL_RS04220 PF08240 Alcohol dehydrogenase GroES-like domain IL_RS04220 PF00550 Phosphopantetheine attachment site IL_RS04220 PF08659 KR domain IL_RS04220 PF00109 Beta-ketoacyl synthase, N-terminal domain IL_RS04220 PF16197 Ketoacyl-synthetase C-terminal extension IL_RS04220 PF02801 Beta-ketoacyl synthase, C-terminal domain IL_RS04230 PF05726 Pirin C-terminal cupin domain IL_RS04230 PF02678 Pirin IL_RS04235 PF13409 Glutathione S-transferase, N-terminal domain IL_RS04240 PF02684 Lipid-A-disaccharide synthetase IL_RS04245 PF00132 Bacterial transferase hexapeptide (six repeats) IL_RS04245 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 IL_RS04250 PF07977 FabA-like domain IL_RS04255 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD IL_RS04255 PF14602 Hexapeptide repeat of succinyl-transferase IL_RS04255 PF00132 Bacterial transferase hexapeptide (six repeats) IL_RS04260 PF03938 Outer membrane protein (OmpH-like) IL_RS04265 PF07244 Surface antigen variable number repeat IL_RS04265 PF01103 Surface antigen IL_RS04270 PF02163 Peptidase family M50 IL_RS04270 PF17820 PDZ domain IL_RS04275 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase IL_RS04275 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain IL_RS04275 PF13288 DXP reductoisomerase C-terminal domain IL_RS04285 PF01255 Putative undecaprenyl diphosphate synthase IL_RS04290 PF01765 Ribosome recycling factor IL_RS04295 PF00696 Amino acid kinase family IL_RS04300 PF00889 Elongation factor TS IL_RS04305 PF00318 Ribosomal protein S2 IL_RS04310 PF00557 Metallopeptidase family M24 IL_RS04315 PF01909 Nucleotidyltransferase domain IL_RS04315 PF01966 HD domain IL_RS04315 PF08335 GlnD PII-uridylyltransferase IL_RS04320 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal IL_RS04320 PF00132 Bacterial transferase hexapeptide (six repeats) IL_RS04320 PF14602 Hexapeptide repeat of succinyl-transferase IL_RS04325 PF04287 tRNA pseudouridine synthase C IL_RS04325 PF00849 RNA pseudouridylate synthase IL_RS04330 PF04287 tRNA pseudouridine synthase C IL_RS04350 PF07348 Syd protein (SUKH-2) IL_RS04355 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term IL_RS04355 PF14489 QueF-like protein IL_RS04365 PF00990 Diguanylate cyclase, GGDEF domain IL_RS04370 PF03641 Possible lysine decarboxylase IL_RS04370 PF11892 Domain of unknown function (DUF3412) IL_RS04370 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases IL_RS04385 PF18324 Hypothetical protein TT1725 IL_RS04385 PF00180 Isocitrate/isopropylmalate dehydrogenase IL_RS04390 PF18125 RlmM ferredoxin-like domain IL_RS04390 PF01728 FtsJ-like methyltransferase IL_RS04395 PF04241 Protein of unknown function (DUF423) IL_RS04405 PF03466 LysR substrate binding domain IL_RS04405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IL_RS04415 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase IL_RS04415 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase IL_RS04420 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain IL_RS04420 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain IL_RS04420 PF00378 Enoyl-CoA hydratase/isomerase IL_RS04425 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IL_RS04425 PF02770 Acyl-CoA dehydrogenase, middle domain IL_RS04425 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IL_RS04430 PF00171 Aldehyde dehydrogenase family IL_RS04435 PF00892 EamA-like transporter family IL_RS04440 PF00108 Thiolase, N-terminal domain IL_RS04440 PF02803 Thiolase, C-terminal domain IL_RS04445 PF00376 MerR family regulatory protein IL_RS04445 PF09278 MerR, DNA binding IL_RS04450 PF02770 Acyl-CoA dehydrogenase, middle domain IL_RS04450 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IL_RS04450 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IL_RS04455 PF01039 Carboxyl transferase domain IL_RS04460 PF00378 Enoyl-CoA hydratase/isomerase IL_RS04465 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain IL_RS04465 PF02785 Biotin carboxylase C-terminal domain IL_RS04465 PF18140 Propionyl-coenzyme A carboxylase BT domain IL_RS04465 PF00289 Biotin carboxylase, N-terminal domain IL_RS04465 PF00364 Biotin-requiring enzyme IL_RS04470 PF00682 HMGL-like IL_RS04475 PF13193 AMP-binding enzyme C-terminal domain IL_RS04475 PF00501 AMP-binding enzyme IL_RS04480 PF00563 EAL domain IL_RS04480 PF03707 Bacterial signalling protein N terminal repeat IL_RS04480 PF00990 Diguanylate cyclase, GGDEF domain IL_RS04490 PF00816 H-NS histone family IL_RS04505 PF18389 TrmO C-terminal domain IL_RS04505 PF01980 tRNA-methyltransferase O IL_RS04510 PF04073 Aminoacyl-tRNA editing domain IL_RS04510 PF03129 Anticodon binding domain IL_RS04510 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) IL_RS04515 PF00156 Phosphoribosyl transferase domain IL_RS04520 PF00111 2Fe-2S iron-sulfur cluster binding domain IL_RS04530 PF04315 Elongation factor P hydroxylase IL_RS04535 PF01264 Chorismate synthase IL_RS04540 PF05175 Methyltransferase small domain IL_RS04545 PF01713 Smr domain IL_RS04550 PF00300 Histidine phosphatase superfamily (branch 1) IL_RS04555 PF03658 RnfH family Ubiquitin IL_RS04560 PF03364 Polyketide cyclase / dehydrase and lipid transport IL_RS04565 PF01668 SmpB protein IL_RS04585 PF00437 Type II/IV secretion system protein IL_RS04590 PF13629 Pilus formation protein N terminal region IL_RS04590 PF04972 BON domain IL_RS04590 PF00263 Bacterial type II and III secretion system protein IL_RS04640 PF04055 Radical SAM superfamily IL_RS04645 PF06508 Queuosine biosynthesis protein QueC IL_RS04650 PF00933 Glycosyl hydrolase family 3 N terminal domain IL_RS04655 PF01471 Putative peptidoglycan binding domain IL_RS04655 PF03572 Peptidase family S41 IL_RS04655 PF17820 PDZ domain IL_RS04660 PF09317 Domain of unknown function (DUF1974) IL_RS04660 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IL_RS04660 PF02770 Acyl-CoA dehydrogenase, middle domain IL_RS04660 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IL_RS04670 PF02386 Cation transport protein IL_RS04675 PF00793 DAHP synthetase I family IL_RS04690 PF11849 Domain of unknown function (DUF3369) IL_RS04695 PF13847 Methyltransferase domain IL_RS04695 PF17827 PrmC N-terminal domain IL_RS04700 PF03462 PCRF domain IL_RS04700 PF00472 RF-1 domain IL_RS04705 PF01488 Shikimate / quinate 5-dehydrogenase IL_RS04705 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain IL_RS04705 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain IL_RS04710 PF03550 Outer membrane lipoprotein LolB IL_RS04715 PF00288 GHMP kinases N terminal domain IL_RS04720 PF14572 Phosphoribosyl synthetase-associated domain IL_RS04720 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase IL_RS04725 PF01386 Ribosomal L25p family IL_RS04725 PF14693 Ribosomal protein TL5, C-terminal domain IL_RS04730 PF01195 Peptidyl-tRNA hydrolase IL_RS04735 PF01926 50S ribosome-binding GTPase IL_RS04735 PF06071 Protein of unknown function (DUF933) IL_RS04750 PF03707 Bacterial signalling protein N terminal repeat IL_RS04750 PF00990 Diguanylate cyclase, GGDEF domain IL_RS04750 PF00563 EAL domain IL_RS04760 PF00206 Lyase IL_RS04760 PF10415 Fumarase C C-terminus IL_RS04765 PF00106 short chain dehydrogenase IL_RS04795 PF01494 FAD binding domain IL_RS04800 PF00892 EamA-like transporter family IL_RS04805 PF01938 TRAM domain IL_RS04805 PF00919 Uncharacterized protein family UPF0004 IL_RS04805 PF04055 Radical SAM superfamily IL_RS04810 PF02562 PhoH-like protein IL_RS04815 PF02130 Uncharacterized protein family UPF0054 IL_RS04820 PF00571 CBS domain IL_RS04820 PF03471 Transporter associated domain IL_RS04825 PF00795 Carbon-nitrogen hydrolase IL_RS04835 PF08264 Anticodon-binding domain of tRNA IL_RS04835 PF13603 Leucyl-tRNA synthetase, Domain 2 IL_RS04835 PF00133 tRNA synthetases class I (I, L, M and V) IL_RS04840 PF04390 Lipopolysaccharide-assembly IL_RS04850 PF01467 Cytidylyltransferase-like IL_RS04860 PF02590 Predicted SPOUT methyltransferase IL_RS04865 PF03717 Penicillin-binding Protein dimerisation domain IL_RS04865 PF00905 Penicillin binding protein transpeptidase domain IL_RS04870 PF01098 Cell cycle protein IL_RS04875 PF13406 Transglycosylase SLT domain IL_RS04880 PF03330 Lytic transglycolase IL_RS04880 PF05036 Sporulation related domain IL_RS04885 PF07943 Penicillin-binding protein 5, C-terminal domain IL_RS04885 PF00768 D-alanyl-D-alanine carboxypeptidase IL_RS04890 PF04359 Protein of unknown function (DUF493) IL_RS04895 PF03099 Biotin/lipoate A/B protein ligase family IL_RS04900 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family IL_RS04900 PF04055 Radical SAM superfamily IL_RS04915 PF13181 Tetratricopeptide repeat IL_RS04915 PF07719 Tetratricopeptide repeat IL_RS04920 PF00575 S1 RNA binding domain IL_RS04920 PF03725 3' exoribonuclease family, domain 2 IL_RS04920 PF01138 3' exoribonuclease family, domain 1 IL_RS04920 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain IL_RS04920 PF00013 KH domain IL_RS04925 PF00312 Ribosomal protein S15 IL_RS04930 PF09157 Pseudouridine synthase II TruB, C-terminal IL_RS04930 PF16198 tRNA pseudouridylate synthase B C-terminal domain IL_RS04930 PF01509 TruB family pseudouridylate synthase (N terminal domain) IL_RS04935 PF02033 Ribosome-binding factor A IL_RS04940 PF08364 Bacterial translation initiation factor IF-2 associated region IL_RS04940 PF11987 Translation-initiation factor 2 IL_RS04940 PF00009 Elongation factor Tu GTP binding domain IL_RS04940 PF04760 Translation initiation factor IF-2, N-terminal region IL_RS04945 PF08529 NusA N-terminal domain IL_RS04945 PF13184 NusA-like KH domain IL_RS04945 PF00575 S1 RNA binding domain IL_RS04950 PF17384 RimP C-terminal SH3 domain IL_RS04950 PF02576 RimP N-terminal domain IL_RS04965 PF03840 Preprotein translocase SecG subunit IL_RS04970 PF00121 Triosephosphate isomerase IL_RS04975 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III IL_RS04975 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II IL_RS04975 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain IL_RS04975 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I IL_RS04980 PF00809 Pterin binding enzyme IL_RS04985 PF00004 ATPase family associated with various cellular activities (AAA) IL_RS04985 PF17862 AAA+ lid domain IL_RS04985 PF06480 FtsH Extracellular IL_RS04985 PF01434 Peptidase family M41 IL_RS04990 PF01728 FtsJ-like methyltransferase IL_RS04995 PF01985 CRS1 / YhbY (CRM) domain IL_RS05005 PF03449 Transcription elongation factor, N-terminal IL_RS05005 PF01272 Transcription elongation factor, GreA/GreB, C-term IL_RS05010 PF02142 MGS-like domain IL_RS05010 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain IL_RS05010 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain IL_RS05015 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain IL_RS05015 PF00117 Glutamine amidotransferase class-I IL_RS05020 PF05173 Dihydrodipicolinate reductase, C-terminus IL_RS05020 PF01113 Dihydrodipicolinate reductase, N-terminus IL_RS05025 PF00375 Sodium:dicarboxylate symporter family IL_RS05030 PF07720 Tetratricopeptide repeat IL_RS05030 PF01435 Peptidase family M48 IL_RS05035 PF00226 DnaJ domain IL_RS05035 PF01556 DnaJ C terminal domain IL_RS05035 PF00684 DnaJ central domain IL_RS05040 PF00012 Hsp70 protein IL_RS05045 PF01025 GrpE IL_RS05050 PF01513 ATP-NAD kinase IL_RS05055 PF02463 RecF/RecN/SMC N terminal domain IL_RS05060 PF04355 SmpA / OmlA family IL_RS05065 PF00675 Insulinase (Peptidase family M16) IL_RS05065 PF05193 Peptidase M16 inactive domain IL_RS05070 PF00563 EAL domain IL_RS05070 PF03707 Bacterial signalling protein N terminal repeat IL_RS05070 PF00990 Diguanylate cyclase, GGDEF domain IL_RS05075 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain IL_RS05075 PF00378 Enoyl-CoA hydratase/isomerase IL_RS05075 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain IL_RS05080 PF00108 Thiolase, N-terminal domain IL_RS05080 PF02803 Thiolase, C-terminal domain IL_RS05085 PF07726 ATPase family associated with various cellular activities (AAA) IL_RS05085 PF17863 AAA lid domain IL_RS05090 PF01882 Protein of unknown function DUF58 IL_RS05100 PF00092 von Willebrand factor type A domain IL_RS05105 PF13519 von Willebrand factor type A domain IL_RS05115 PF13145 PPIC-type PPIASE domain IL_RS05120 PF00216 Bacterial DNA-binding protein IL_RS05125 PF05362 Lon protease (S16) C-terminal proteolytic domain IL_RS05125 PF02190 ATP-dependent protease La (LON) substrate-binding domain IL_RS05125 PF00004 ATPase family associated with various cellular activities (AAA) IL_RS05130 PF06689 ClpX C4-type zinc finger IL_RS05130 PF07724 AAA domain (Cdc48 subfamily) IL_RS05130 PF10431 C-terminal, D2-small domain, of ClpB protein IL_RS05135 PF00574 Clp protease IL_RS05140 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IL_RS05140 PF05697 Bacterial trigger factor protein (TF) IL_RS05140 PF05698 Bacterial trigger factor protein (TF) C-terminus IL_RS05170 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain IL_RS05170 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain IL_RS05180 PF08272 Topoisomerase I zinc-ribbon-like IL_RS05180 PF01131 DNA topoisomerase IL_RS05180 PF01396 Topoisomerase DNA binding C4 zinc finger IL_RS05180 PF01751 Toprim domain IL_RS05185 PF04996 Succinylarginine dihydrolase IL_RS05190 PF00156 Phosphoribosyl transferase domain IL_RS05195 PF02674 Colicin V production protein IL_RS05200 PF05036 Sporulation related domain IL_RS05205 PF08245 Mur ligase middle domain IL_RS05205 PF02875 Mur ligase family, glutamate ligase domain IL_RS05210 PF17848 Acetyl-coA carboxylase zinc finger domain IL_RS05210 PF01039 Carboxyl transferase domain IL_RS05215 PF01416 tRNA pseudouridine synthase IL_RS05225 PF01118 Semialdehyde dehydrogenase, NAD binding domain IL_RS05225 PF02774 Semialdehyde dehydrogenase, dimerisation domain IL_RS05230 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain IL_RS05230 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IL_RS05230 PF11890 Domain of unknown function (DUF3410) IL_RS05235 PF00109 Beta-ketoacyl synthase, N-terminal domain IL_RS05235 PF02801 Beta-ketoacyl synthase, C-terminal domain IL_RS05240 PF05430 S-adenosyl-L-methionine-dependent methyltransferase IL_RS05240 PF01266 FAD dependent oxidoreductase IL_RS05250 PF00258 Flavodoxin IL_RS05260 PF03061 Thioesterase superfamily IL_RS05265 PF00326 Prolyl oligopeptidase family IL_RS05265 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region IL_RS05270 PF07715 TonB-dependent Receptor Plug Domain IL_RS05270 PF00593 TonB dependent receptor IL_RS05285 PF00149 Calcineurin-like phosphoesterase IL_RS05290 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD IL_RS05295 PF09190 DALR domain IL_RS05295 PF01406 tRNA synthetases class I (C) catalytic domain IL_RS05300 PF02789 Cytosol aminopeptidase family, N-terminal domain IL_RS05300 PF00883 Cytosol aminopeptidase family, catalytic domain IL_RS05310 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) IL_RS05315 PF00375 Sodium:dicarboxylate symporter family IL_RS05320 PF08496 Peptidase family S49 N-terminal IL_RS05320 PF01343 Peptidase family S49 IL_RS05325 PF12262 Bacterial virulence factor lipase N-terminal IL_RS05330 PF00106 short chain dehydrogenase IL_RS05340 PF00266 Aminotransferase class-V IL_RS05350 PF02424 ApbE family IL_RS05355 PF00111 2Fe-2S iron-sulfur cluster binding domain IL_RS05355 PF00970 Oxidoreductase FAD-binding domain IL_RS05355 PF00175 Oxidoreductase NAD-binding domain IL_RS05360 PF02508 Rnf-Nqr subunit, membrane protein IL_RS05365 PF02508 Rnf-Nqr subunit, membrane protein IL_RS05370 PF04205 FMN-binding domain IL_RS05375 PF03116 NQR2, RnfD, RnfE family IL_RS05380 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) IL_RS05380 PF11973 NQRA C-terminal domain IL_RS05385 PF12241 Trans-2-enoyl-CoA reductase catalytic region IL_RS05385 PF07055 Enoyl reductase FAD binding domain IL_RS05385 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase IL_RS05390 PF01722 BolA-like protein IL_RS05410 PF02470 MlaD protein IL_RS05415 PF04403 Paraquat-inducible protein A IL_RS05425 PF13416 Bacterial extracellular solute-binding protein IL_RS05435 PF00005 ABC transporter IL_RS05435 PF08402 TOBE domain IL_RS05440 PF01544 CorA-like Mg2+ transporter protein IL_RS05445 PF16177 Acetyl-coenzyme A synthetase N-terminus IL_RS05445 PF00501 AMP-binding enzyme IL_RS05445 PF13193 AMP-binding enzyme C-terminal domain IL_RS05450 PF01699 Sodium/calcium exchanger protein IL_RS05455 PF00210 Ferritin-like domain IL_RS05460 PF00210 Ferritin-like domain IL_RS05470 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IL_RS05470 PF00672 HAMP domain IL_RS05475 PF07722 Peptidase C26 IL_RS05485 PF04151 Bacterial pre-peptidase C-terminal domain IL_RS05485 PF04389 Peptidase family M28 IL_RS05500 PF07992 Pyridine nucleotide-disulphide oxidoreductase IL_RS05500 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster IL_RS05505 PF04898 Glutamate synthase central domain IL_RS05505 PF01645 Conserved region in glutamate synthase IL_RS05505 PF01493 GXGXG motif IL_RS05505 PF00310 Glutamine amidotransferases class-II IL_RS05510 PF13006 Insertion element 4 transposase N-terminal IL_RS05510 PF01609 Transposase DDE domain IL_RS05515 PF02445 Quinolinate synthetase A protein IL_RS05530 PF13174 Tetratricopeptide repeat IL_RS05530 PF16331 TolA binding protein trimerisation IL_RS05535 PF00691 OmpA family IL_RS05540 PF04052 TolB amino-terminal domain IL_RS05540 PF07676 WD40-like Beta Propeller Repeat IL_RS05550 PF02472 Biopolymer transport protein ExbD/TolR IL_RS05555 PF01618 MotA/TolQ/ExbB proton channel family IL_RS05560 PF03061 Thioesterase superfamily IL_RS05565 PF05496 Holliday junction DNA helicase RuvB P-loop domain IL_RS05565 PF05491 RuvB C-terminal winged helix domain IL_RS05565 PF17864 RuvB AAA lid domain IL_RS05570 PF07499 RuvA, C-terminal domain IL_RS05570 PF01330 RuvA N terminal domain IL_RS05575 PF02075 Crossover junction endodeoxyribonuclease RuvC IL_RS05580 PF01709 Transcriptional regulator IL_RS05585 PF00152 tRNA synthetases class II (D, K and N) IL_RS05585 PF02938 GAD domain IL_RS05585 PF01336 OB-fold nucleic acid binding domain IL_RS05590 PF03707 Bacterial signalling protein N terminal repeat IL_RS05590 PF00990 Diguanylate cyclase, GGDEF domain IL_RS05590 PF00563 EAL domain IL_RS05595 PF13847 Methyltransferase domain IL_RS05600 PF08003 Protein of unknown function (DUF1698) IL_RS05605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IL_RS05605 PF03466 LysR substrate binding domain IL_RS05610 PF00483 Nucleotidyl transferase IL_RS05620 PF00072 Response regulator receiver domain IL_RS05625 PF04333 MlaA lipoprotein IL_RS05635 PF03918 Cytochrome C biogenesis protein IL_RS05640 PF08534 Redoxin IL_RS05645 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal IL_RS05645 PF01578 Cytochrome C assembly protein IL_RS05650 PF03100 CcmE IL_RS05660 PF01578 Cytochrome C assembly protein IL_RS05665 PF03379 CcmB protein IL_RS05670 PF00005 ABC transporter IL_RS05680 PF01312 FlhB HrpN YscU SpaS Family IL_RS05690 PF01584 CheW-like domain IL_RS05700 PF13614 AAA domain IL_RS05705 PF01339 CheB methylesterase IL_RS05705 PF00072 Response regulator receiver domain IL_RS05710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IL_RS05710 PF00072 Response regulator receiver domain IL_RS05710 PF02895 Signal transducing histidine kinase, homodimeric domain IL_RS05710 PF01584 CheW-like domain IL_RS05710 PF01627 Hpt domain IL_RS05715 PF04344 Chemotaxis phosphatase, CheZ IL_RS05720 PF00072 Response regulator receiver domain IL_RS05725 PF04542 Sigma-70 region 2 IL_RS05725 PF04539 Sigma-70 region 3 IL_RS05725 PF04545 Sigma-70, region 4 IL_RS05730 PF10609 NUBPL iron-transfer P-loop NTPase IL_RS05735 PF00448 SRP54-type protein, GTPase domain IL_RS05740 PF00771 FHIPEP family IL_RS05765 PF02401 LytB protein IL_RS05770 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IL_RS05775 PF01252 Signal peptidase (SPase) II IL_RS05780 PF06827 Zinc finger found in FPG and IleRS IL_RS05780 PF00133 tRNA synthetases class I (I, L, M and V) IL_RS05780 PF08264 Anticodon-binding domain of tRNA IL_RS05785 PF06574 FAD synthetase IL_RS05785 PF01687 Riboflavin kinase IL_RS05790 PF03023 Lipid II flippase MurJ IL_RS05795 PF01649 Ribosomal protein S20 IL_RS05810 PF07195 Flagellar hook-associated protein 2 C-terminus IL_RS05810 PF02465 Flagellar hook-associated protein 2 N-terminus IL_RS05810 PF07196 Flagellin hook IN motif IL_RS05820 PF00669 Bacterial flagellin N-terminal helical region IL_RS05820 PF07196 Flagellin hook IN motif IL_RS05820 PF00700 Bacterial flagellin C-terminal helical region IL_RS05830 PF06429 Flagellar basal body rod FlgEFG protein C-terminal IL_RS05830 PF00460 Flagella basal body rod protein IL_RS05835 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase IL_RS05835 PF10135 Rod binding protein IL_RS05840 PF02119 Flagellar P-ring protein IL_RS05845 PF02107 Flagellar L-ring protein IL_RS05850 PF00460 Flagella basal body rod protein IL_RS05850 PF06429 Flagellar basal body rod FlgEFG protein C-terminal IL_RS05855 PF06429 Flagellar basal body rod FlgEFG protein C-terminal IL_RS05855 PF00460 Flagella basal body rod protein IL_RS05860 PF06429 Flagellar basal body rod FlgEFG protein C-terminal IL_RS05860 PF00460 Flagella basal body rod protein IL_RS05860 PF07559 Flagellar basal body protein FlaE IL_RS05865 PF13861 FlgD Tudor-like domain IL_RS05865 PF03963 Flagellar hook capping protein - N-terminal region IL_RS05865 PF13860 FlgD Ig-like domain IL_RS05870 PF06429 Flagellar basal body rod FlgEFG protein C-terminal IL_RS05870 PF00460 Flagella basal body rod protein IL_RS05875 PF00460 Flagella basal body rod protein IL_RS05880 PF03705 CheR methyltransferase, all-alpha domain IL_RS05880 PF01739 CheR methyltransferase, SAM binding domain IL_RS05885 PF01584 CheW-like domain IL_RS05885 PF00072 Response regulator receiver domain IL_RS05925 PF01066 CDP-alcohol phosphatidyltransferase IL_RS05930 PF00005 ABC transporter IL_RS05935 PF00528 Binding-protein-dependent transport system inner membrane component IL_RS05945 PF07992 Pyridine nucleotide-disulphide oxidoreductase IL_RS05945 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IL_RS05950 PF05016 ParE toxin of type II toxin-antitoxin system, parDE IL_RS05965 PF06719 AraC-type transcriptional regulator N-terminus IL_RS05965 PF12833 Helix-turn-helix domain IL_RS06010 PF07715 TonB-dependent Receptor Plug Domain IL_RS06010 PF00593 TonB dependent receptor IL_RS06020 PF07715 TonB-dependent Receptor Plug Domain IL_RS06020 PF00593 TonB dependent receptor IL_RS06030 PF00571 CBS domain IL_RS06030 PF01380 SIS domain IL_RS06035 PF00474 Sodium:solute symporter family IL_RS06070 PF01066 CDP-alcohol phosphatidyltransferase IL_RS06075 PF10431 C-terminal, D2-small domain, of ClpB protein IL_RS06075 PF02861 Clp amino terminal domain, pathogenicity island component IL_RS06075 PF17871 AAA lid domain IL_RS06075 PF07724 AAA domain (Cdc48 subfamily) IL_RS06075 PF00004 ATPase family associated with various cellular activities (AAA) IL_RS06080 PF02578 Multi-copper polyphenol oxidoreductase laccase IL_RS06085 PF01479 S4 domain IL_RS06085 PF00849 RNA pseudouridylate synthase IL_RS06090 PF13525 Outer membrane lipoprotein IL_RS06095 PF00543 Nitrogen regulatory protein P-II IL_RS06100 PF02540 NAD synthase IL_RS06100 PF00795 Carbon-nitrogen hydrolase IL_RS06105 PF01312 FlhB HrpN YscU SpaS Family IL_RS06110 PF01311 Bacterial export proteins, family 1 IL_RS06115 PF01313 Bacterial export proteins, family 3 IL_RS06120 PF00813 FliP family IL_RS06125 PF04347 Flagellar biosynthesis protein, FliO IL_RS06130 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term IL_RS06135 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term IL_RS06135 PF02154 Flagellar motor switch protein FliM IL_RS06155 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IL_RS06155 PF18269 T3SS EscN ATPase C-terminal domain IL_RS06165 PF01706 FliG C-terminal domain IL_RS06165 PF14841 FliG middle domain IL_RS06165 PF14842 FliG N-terminal domain IL_RS06170 PF08345 Flagellar M-ring protein C-terminal IL_RS06170 PF01514 Secretory protein of YscJ/FliF family IL_RS06175 PF02049 Flagellar hook-basal body complex protein FliE IL_RS06180 PF02954 Bacterial regulatory protein, Fis family IL_RS06180 PF00158 Sigma-54 interaction domain IL_RS06180 PF00072 Response regulator receiver domain IL_RS06185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IL_RS06185 PF00512 His Kinase A (phospho-acceptor) domain IL_RS06185 PF13188 PAS domain IL_RS06190 PF00158 Sigma-54 interaction domain IL_RS06190 PF02954 Bacterial regulatory protein, Fis family IL_RS06190 PF06490 Flagellar regulatory protein FleQ IL_RS06200 PF00196 Bacterial regulatory proteins, luxR family IL_RS06200 PF00072 Response regulator receiver domain IL_RS06205 PF07969 Amidohydrolase family IL_RS06210 PF11849 Domain of unknown function (DUF3369) IL_RS06215 PF01243 Pyridoxamine 5'-phosphate oxidase IL_RS06215 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region IL_RS06225 PF00365 Phosphofructokinase IL_RS06230 PF00491 Arginase family IL_RS06235 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain IL_RS06235 PF17944 Arginine decarboxylase C-terminal helical extension IL_RS06235 PF17810 Arginine decarboxylase helical bundle domain IL_RS06245 PF13333 Integrase core domain IL_RS06245 PF13276 HTH-like domain IL_RS06245 PF00665 Integrase core domain IL_RS06270 PF00403 Heavy-metal-associated domain IL_RS06290 PF00873 AcrB/AcrD/AcrF family IL_RS06305 PF00111 2Fe-2S iron-sulfur cluster binding domain IL_RS06305 PF00175 Oxidoreductase NAD-binding domain IL_RS06305 PF00970 Oxidoreductase FAD-binding domain IL_RS06315 PF00593 TonB dependent receptor IL_RS06315 PF07715 TonB-dependent Receptor Plug Domain IL_RS06325 PF13520 Amino acid permease IL_RS06350 PF00394 Multicopper oxidase IL_RS06350 PF07732 Multicopper oxidase IL_RS06350 PF07731 Multicopper oxidase IL_RS06355 PF02416 mttA/Hcf106 family IL_RS06380 PF01252 Signal peptidase (SPase) II IL_RS06390 PF13411 MerR HTH family regulatory protein IL_RS06405 PF13617 YnbE-like lipoprotein IL_RS06420 PF13532 2OG-Fe(II) oxygenase superfamily IL_RS06445 PF03466 LysR substrate binding domain IL_RS06445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IL_RS06475 PF02743 Cache domain IL_RS06475 PF00672 HAMP domain IL_RS06475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IL_RS06475 PF06580 Histidine kinase IL_RS06480 PF04397 LytTr DNA-binding domain IL_RS06480 PF00072 Response regulator receiver domain IL_RS06490 PF00224 Pyruvate kinase, barrel domain IL_RS06490 PF02887 Pyruvate kinase, alpha/beta domain IL_RS06495 PF01641 SelR domain IL_RS06505 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain IL_RS06505 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain IL_RS06510 PF00246 Zinc carboxypeptidase IL_RS06510 PF18027 Cytosolic carboxypeptidase N-terminal domain IL_RS06515 PF01235 Sodium:alanine symporter family IL_RS06525 PF07023 Protein of unknown function (DUF1315) IL_RS06530 PF13185 GAF domain IL_RS06540 PF17516 ProQ C-terminal domain IL_RS06540 PF04352 ProQ/FINO family IL_RS06545 PF17804 Tail specific protease N-terminal domain IL_RS06545 PF03572 Peptidase family S41 IL_RS06545 PF00595 PDZ domain IL_RS06545 PF11818 C-terminal domain of tail specific protease (DUF3340) IL_RS06550 PF00209 Sodium:neurotransmitter symporter family IL_RS06555 PF03553 Na+/H+ antiporter family IL_RS06560 PF11940 Domain of unknown function (DUF3458) Ig-like fold IL_RS06560 PF01433 Peptidase family M1 domain IL_RS06560 PF17432 Domain of unknown function (DUF3458_C) ARM repeats IL_RS06570 PF05088 Bacterial NAD-glutamate dehydrogenase IL_RS06575 PF01180 Dihydroorotate dehydrogenase IL_RS06580 PF07126 Cell-division protein ZapC IL_RS06590 PF10672 S-adenosylmethionine-dependent methyltransferase IL_RS06590 PF02926 THUMP domain IL_RS06590 PF01170 Putative RNA methylase family UPF0020 IL_RS06600 PF12848 ABC transporter IL_RS06600 PF16326 ABC transporter C-terminal domain IL_RS06600 PF00005 ABC transporter IL_RS06610 PF04957 Ribosome modulation factor IL_RS06615 PF07977 FabA-like domain IL_RS06620 PF13654 AAA domain IL_RS06620 PF05362 Lon protease (S16) C-terminal proteolytic domain IL_RS06635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IL_RS06635 PF03466 LysR substrate binding domain IL_RS06640 PF02525 Flavodoxin-like fold IL_RS06655 PF00873 AcrB/AcrD/AcrF family IL_RS06660 PF17200 Single Cache domain 2 IL_RS06660 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IL_RS06660 PF00672 HAMP domain IL_RS06665 PF00115 Cytochrome C and Quinol oxidase polypeptide I IL_RS06680 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP IL_RS06680 PF13442 Cytochrome C oxidase, cbb3-type, subunit III IL_RS06690 PF00403 Heavy-metal-associated domain IL_RS06705 PF00582 Universal stress protein family IL_RS06710 PF01171 PP-loop family IL_RS06725 PF00849 RNA pseudouridylate synthase IL_RS06735 PF04356 Protein of unknown function (DUF489) IL_RS06740 PF00206 Lyase IL_RS06740 PF08328 Adenylosuccinate lyase C-terminal IL_RS06745 PF08007 Cupin superfamily protein IL_RS06750 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase IL_RS06750 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain IL_RS06755 PF02913 FAD linked oxidases, C-terminal domain IL_RS06755 PF13183 4Fe-4S dicluster domain IL_RS06755 PF01565 FAD binding domain IL_RS06760 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain IL_RS06760 PF00391 PEP-utilising enzyme, mobile domain IL_RS06760 PF02896 PEP-utilising enzyme, TIM barrel domain IL_RS06765 PF03618 Kinase/pyrophosphorylase IL_RS06775 PF01474 Class-II DAHP synthetase family IL_RS06780 PF01435 Peptidase family M48 IL_RS06790 PF08241 Methyltransferase domain IL_RS06795 PF00155 Aminotransferase class I and II IL_RS06800 PF04055 Radical SAM superfamily IL_RS06800 PF06968 Biotin and Thiamin Synthesis associated domain IL_RS06805 PF00202 Aminotransferase class-III IL_RS06815 PF01336 OB-fold nucleic acid binding domain IL_RS06815 PF00152 tRNA synthetases class II (D, K and N) IL_RS06825 PF01343 Peptidase family S49 IL_RS06830 PF17763 Glutaminase/Asparaginase C-terminal domain IL_RS06830 PF00710 Asparaginase, N-terminal IL_RS06835 PF00209 Sodium:neurotransmitter symporter family IL_RS06840 PF03972 MmgE/PrpD family IL_RS06845 PF01026 TatD related DNase IL_RS06855 PF09115 DNA polymerase III, delta subunit, C terminal IL_RS06860 PF02223 Thymidylate kinase IL_RS06865 PF02618 YceG-like family IL_RS06870 PF01063 Amino-transferase class IV IL_RS06875 PF00550 Phosphopantetheine attachment site IL_RS06885 PF00698 Acyl transferase domain IL_RS06890 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III IL_RS06890 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal IL_RS06895 PF02504 Fatty acid synthesis protein IL_RS06900 PF01783 Ribosomal L32p protein family IL_RS06905 PF02620 Large ribosomal RNA subunit accumulation protein YceD IL_RS06910 PF02545 Maf-like protein IL_RS06915 PF13419 Haloacid dehalogenase-like hydrolase IL_RS06920 PF01479 S4 domain IL_RS06920 PF00849 RNA pseudouridylate synthase IL_RS06925 PF12111 Polyribonucleotide phosphorylase C terminal IL_RS06925 PF00575 S1 RNA binding domain IL_RS06925 PF10150 Ribonuclease E/G family IL_RS06935 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family IL_RS06940 PF18073 Rubredoxin metal binding domain IL_RS06950 PF00216 Bacterial DNA-binding protein IL_RS06955 PF00575 S1 RNA binding domain IL_RS06960 PF02224 Cytidylate kinase IL_RS06965 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) IL_RS06970 PF00155 Aminotransferase class I and II IL_RS06975 PF00266 Aminotransferase class-V IL_RS06980 PF03989 DNA gyrase C-terminal domain, beta-propeller IL_RS06980 PF00521 DNA gyrase/topoisomerase IV, subunit A IL_RS06990 PF13419 Haloacid dehalogenase-like hydrolase IL_RS06995 PF00317 Ribonucleotide reductase, all-alpha domain IL_RS06995 PF02867 Ribonucleotide reductase, barrel domain IL_RS06995 PF03477 ATP cone domain IL_RS07000 PF00268 Ribonucleotide reductase, small chain IL_RS07010 PF00462 Glutaredoxin IL_RS07015 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold IL_RS07015 PF00270 DEAD/DEAH box helicase IL_RS07015 PF00271 Helicase conserved C-terminal domain IL_RS07015 PF04408 Helicase associated domain (HA2) IL_RS07015 PF11898 Domain of unknown function (DUF3418) IL_RS07020 PF01112 Asparaginase IL_RS07030 PF08411 Exonuclease C-terminal IL_RS07030 PF00929 Exonuclease IL_RS07035 PF00732 GMC oxidoreductase IL_RS07035 PF05199 GMC oxidoreductase IL_RS07050 PF07044 Protein of unknown function (DUF1329) IL_RS07055 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase IL_RS07055 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase IL_RS07060 PF13847 Methyltransferase domain IL_RS07065 PF01784 NIF3 (NGG1p interacting factor 3) IL_RS07105 PF01266 FAD dependent oxidoreductase IL_RS07110 PF00106 short chain dehydrogenase IL_RS07120 PF00875 DNA photolyase IL_RS07120 PF03441 FAD binding domain of DNA photolyase IL_RS07125 PF08349 Protein of unknown function (DUF1722) IL_RS07135 PF04545 Sigma-70, region 4 IL_RS07135 PF04542 Sigma-70 region 2 IL_RS07145 PF00216 Bacterial DNA-binding protein IL_RS07150 PF03484 tRNA synthetase B5 domain IL_RS07150 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain IL_RS07150 PF01588 Putative tRNA binding domain IL_RS07150 PF03147 Ferredoxin-fold anticodon binding domain IL_RS07150 PF03483 B3/4 domain IL_RS07155 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain IL_RS07155 PF01409 tRNA synthetases class II core domain (F) IL_RS07160 PF00453 Ribosomal protein L20 IL_RS07165 PF01632 Ribosomal protein L35 IL_RS07170 PF00707 Translation initiation factor IF-3, C-terminal domain IL_RS07170 PF05198 Translation initiation factor IF-3, N-terminal domain IL_RS07175 PF02824 TGS domain IL_RS07175 PF03129 Anticodon binding domain IL_RS07175 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain IL_RS07175 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) IL_RS07190 PF00677 Lumazine binding domain IL_RS07220 PF00171 Aldehyde dehydrogenase family IL_RS07225 PF00158 Sigma-54 interaction domain IL_RS07235 PF00465 Iron-containing alcohol dehydrogenase IL_RS07250 PF00271 Helicase conserved C-terminal domain IL_RS07250 PF03880 DbpA RNA binding domain IL_RS07250 PF00270 DEAD/DEAH box helicase IL_RS07255 PF00141 Peroxidase IL_RS07260 PF07715 TonB-dependent Receptor Plug Domain IL_RS07260 PF00593 TonB dependent receptor IL_RS07275 PF02028 BCCT, betaine/carnitine/choline family transporter IL_RS07280 PF00571 CBS domain IL_RS07290 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IL_RS07290 PF00672 HAMP domain IL_RS07290 PF12729 Four helix bundle sensory module for signal transduction IL_RS07305 PF04303 PrpF protein IL_RS07310 PF00330 Aconitase family (aconitate hydratase) IL_RS07310 PF00694 Aconitase C-terminal domain IL_RS07315 PF00285 Citrate synthase, C-terminal domain IL_RS07330 PF03741 Integral membrane protein TerC family IL_RS07335 PF00854 POT family IL_RS07350 PF03971 Monomeric isocitrate dehydrogenase IL_RS07355 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IL_RS07370 PF02673 Bacitracin resistance protein BacA IL_RS07380 PF01842 ACT domain IL_RS07380 PF00696 Amino acid kinase family IL_RS07385 PF08240 Alcohol dehydrogenase GroES-like domain IL_RS07385 PF00107 Zinc-binding dehydrogenase IL_RS07390 PF00990 Diguanylate cyclase, GGDEF domain IL_RS07395 PF00753 Metallo-beta-lactamase superfamily IL_RS07405 PF13091 PLD-like domain IL_RS07420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IL_RS07420 PF00512 His Kinase A (phospho-acceptor) domain IL_RS07420 PF00072 Response regulator receiver domain IL_RS07420 PF09308 LuxQ, periplasmic IL_RS07440 PF03372 Endonuclease/Exonuclease/phosphatase family IL_RS07445 PF04217 Protein of unknown function, DUF412 IL_RS07455 PF03960 ArsC family IL_RS07460 PF07687 Peptidase dimerisation domain IL_RS07460 PF01546 Peptidase family M20/M25/M40 IL_RS07465 PF02557 D-alanyl-D-alanine carboxypeptidase IL_RS07475 PF01259 SAICAR synthetase IL_RS07480 PF06804 NlpB/DapX lipoprotein IL_RS07485 PF00701 Dihydrodipicolinate synthetase family IL_RS07490 PF00578 AhpC/TSA family IL_RS07495 PF01594 AI-2E family transporter IL_RS07500 PF07720 Tetratricopeptide repeat IL_RS07500 PF01435 Peptidase family M48 IL_RS07510 PF03960 ArsC family IL_RS07515 PF03358 NADPH-dependent FMN reductase IL_RS07525 PF00308 Bacterial dnaA protein IL_RS07540 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain IL_RS07540 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I IL_RS07540 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II IL_RS07540 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III IL_RS07545 PF03925 SeqA protein C-terminal domain IL_RS07545 PF17206 SeqA protein N-terminal domain IL_RS07550 PF00561 alpha/beta hydrolase fold IL_RS07560 PF00258 Flavodoxin IL_RS07565 PF01475 Ferric uptake regulator family IL_RS07575 PF00749 tRNA synthetases class I (E and Q), catalytic domain IL_RS07575 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain IL_RS07580 PF02626 Carboxyltransferase domain, subdomain A and B IL_RS07590 PF03746 LamB/YcsF family IL_RS07610 PF00106 short chain dehydrogenase IL_RS07620 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IL_RS07620 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IL_RS07620 PF02770 Acyl-CoA dehydrogenase, middle domain IL_RS07645 PF00271 Helicase conserved C-terminal domain IL_RS07645 PF00270 DEAD/DEAH box helicase IL_RS07650 PF03707 Bacterial signalling protein N terminal repeat IL_RS07650 PF00563 EAL domain IL_RS07650 PF00990 Diguanylate cyclase, GGDEF domain IL_RS07655 PF13188 PAS domain IL_RS07655 PF00563 EAL domain IL_RS07655 PF00990 Diguanylate cyclase, GGDEF domain IL_RS07655 PF03707 Bacterial signalling protein N terminal repeat IL_RS07680 PF00210 Ferritin-like domain IL_RS07685 PF13006 Insertion element 4 transposase N-terminal IL_RS07685 PF01609 Transposase DDE domain IL_RS07690 PF00549 CoA-ligase IL_RS07690 PF02629 CoA binding domain IL_RS07695 PF08442 ATP-grasp domain IL_RS07695 PF00549 CoA-ligase IL_RS07700 PF00364 Biotin-requiring enzyme IL_RS07700 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) IL_RS07700 PF02817 e3 binding domain IL_RS07705 PF02779 Transketolase, pyrimidine binding domain IL_RS07705 PF16870 2-oxoglutarate dehydrogenase C-terminal IL_RS07705 PF16078 2-oxoglutarate dehydrogenase N-terminus IL_RS07705 PF00676 Dehydrogenase E1 component IL_RS07710 PF13085 2Fe-2S iron-sulfur cluster binding domain IL_RS07715 PF02910 Fumarate reductase flavoprotein C-term IL_RS07715 PF00890 FAD binding domain IL_RS07720 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit IL_RS07725 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit IL_RS07730 PF00285 Citrate synthase, C-terminal domain IL_RS07740 PF02348 Cytidylyltransferase IL_RS07745 PF03966 Trm112p-like protein IL_RS07750 PF02606 Tetraacyldisaccharide-1-P 4'-kinase IL_RS07755 PF00664 ABC transporter transmembrane region IL_RS07755 PF00005 ABC transporter IL_RS07760 PF03772 Competence protein IL_RS07760 PF00753 Metallo-beta-lactamase superfamily IL_RS07770 PF12704 MacB-like periplasmic core domain IL_RS07770 PF02687 FtsX-like permease family IL_RS07775 PF00005 ABC transporter IL_RS07780 PF12704 MacB-like periplasmic core domain IL_RS07780 PF02687 FtsX-like permease family IL_RS07790 PF02559 CarD-like/TRCF domain IL_RS07790 PF17757 UvrB interaction domain IL_RS07790 PF00270 DEAD/DEAH box helicase IL_RS07790 PF03461 TRCF domain IL_RS07790 PF00271 Helicase conserved C-terminal domain IL_RS07810 PF01641 SelR domain IL_RS07810 PF01625 Peptide methionine sulfoxide reductase IL_RS07815 PF13537 Glutamine amidotransferase domain IL_RS07815 PF00733 Asparagine synthase IL_RS07820 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain IL_RS07820 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain IL_RS07825 PF00474 Sodium:solute symporter family IL_RS07845 PF01609 Transposase DDE domain IL_RS07845 PF13006 Insertion element 4 transposase N-terminal IL_RS07850 PF00694 Aconitase C-terminal domain IL_RS07850 PF00330 Aconitase family (aconitate hydratase) IL_RS07860 PF07670 Nucleoside recognition IL_RS07860 PF07662 Na+ dependent nucleoside transporter C-terminus IL_RS07860 PF01773 Na+ dependent nucleoside transporter N-terminus IL_RS07865 PF00485 Phosphoribulokinase / Uridine kinase family IL_RS07870 PF05193 Peptidase M16 inactive domain IL_RS07870 PF00675 Insulinase (Peptidase family M16) IL_RS07880 PF00563 EAL domain IL_RS07880 PF00990 Diguanylate cyclase, GGDEF domain IL_RS07880 PF10442 FIST C domain IL_RS07880 PF08495 FIST N domain IL_RS07890 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain IL_RS07890 PF00753 Metallo-beta-lactamase superfamily IL_RS07890 PF10996 Beta-Casp domain IL_RS07895 PF02770 Acyl-CoA dehydrogenase, middle domain IL_RS07895 PF18158 Adaptive response protein AidB N-terminal domain IL_RS07895 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IL_RS07905 PF00563 EAL domain IL_RS07905 PF00990 Diguanylate cyclase, GGDEF domain IL_RS07905 PF03707 Bacterial signalling protein N terminal repeat IL_RS07905 PF13188 PAS domain IL_RS07915 PF00271 Helicase conserved C-terminal domain IL_RS07915 PF00270 DEAD/DEAH box helicase IL_RS07925 PF07130 YebG protein IL_RS07930 PF07690 Major Facilitator Superfamily IL_RS07950 PF00472 RF-1 domain IL_RS07965 PF01063 Amino-transferase class IV IL_RS07990 PF04972 BON domain IL_RS08010 PF00691 OmpA family IL_RS08010 PF05736 OprF membrane domain IL_RS08015 PF02146 Sir2 family IL_RS08020 PF04011 LemA family IL_RS08030 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IL_RS08030 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain IL_RS08050 PF03594 Benzoate membrane transport protein IL_RS08055 PF05675 Protein of unknown function (DUF817) IL_RS08090 PF07715 TonB-dependent Receptor Plug Domain IL_RS08090 PF00593 TonB dependent receptor IL_RS08175 PF01292 Prokaryotic cytochrome b561 IL_RS08180 PF00107 Zinc-binding dehydrogenase IL_RS08180 PF08240 Alcohol dehydrogenase GroES-like domain IL_RS08185 PF06100 MCRA family IL_RS08190 PF01042 Endoribonuclease L-PSP IL_RS08210 PF00561 alpha/beta hydrolase fold IL_RS08220 PF07690 Major Facilitator Superfamily IL_RS08230 PF00106 short chain dehydrogenase IL_RS08235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IL_RS08235 PF03466 LysR substrate binding domain IL_RS08240 PF02525 Flavodoxin-like fold IL_RS08245 PF03466 LysR substrate binding domain IL_RS08245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IL_RS08255 PF13086 AAA domain IL_RS08255 PF13087 AAA domain IL_RS08255 PF13195 Protein of unknown function (DUF4011) IL_RS08270 PF13276 HTH-like domain IL_RS08270 PF00665 Integrase core domain IL_RS08270 PF13333 Integrase core domain IL_RS08285 PF07517 SecA DEAD-like domain IL_RS08285 PF02810 SEC-C motif IL_RS08285 PF01043 SecA preprotein cross-linking domain IL_RS08285 PF07516 SecA Wing and Scaffold domain IL_RS08300 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase IL_RS08315 PF01527 Transposase IL_RS08320 PF00665 Integrase core domain IL_RS08320 PF13333 Integrase core domain IL_RS08320 PF13276 HTH-like domain IL_RS08335 PF00589 Phage integrase family IL_RS08340 PF00873 AcrB/AcrD/AcrF family IL_RS08360 PF01252 Signal peptidase (SPase) II IL_RS08385 PF00873 AcrB/AcrD/AcrF family IL_RS08390 PF16916 Dimerisation domain of Zinc Transporter IL_RS08390 PF01545 Cation efflux family IL_RS08395 PF02694 Uncharacterised BCR, YnfA/UPF0060 family IL_RS08400 PF09278 MerR, DNA binding IL_RS08400 PF00376 MerR family regulatory protein IL_RS08405 PF02411 MerT mercuric transport protein IL_RS08410 PF00403 Heavy-metal-associated domain IL_RS08415 PF00403 Heavy-metal-associated domain IL_RS08415 PF07992 Pyridine nucleotide-disulphide oxidoreductase IL_RS08415 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IL_RS08420 PF00512 His Kinase A (phospho-acceptor) domain IL_RS08420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IL_RS08425 PF00486 Transcriptional regulatory protein, C terminal IL_RS08425 PF00072 Response regulator receiver domain IL_RS08430 PF08019 Phosphoethanolamine transferase EptA/EptB IL_RS08430 PF00884 Sulfatase IL_RS08440 PF01219 Prokaryotic diacylglycerol kinase IL_RS08445 PF00884 Sulfatase IL_RS08455 PF00589 Phage integrase family IL_RS08455 PF13356 Arm DNA-binding domain IL_RS08465 PF00724 NADH:flavin oxidoreductase / NADH oxidase family IL_RS08475 PF02386 Cation transport protein IL_RS08480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IL_RS08480 PF00512 His Kinase A (phospho-acceptor) domain IL_RS08480 PF13493 Domain of unknown function (DUF4118) IL_RS08480 PF02702 Osmosensitive K+ channel His kinase sensor domain IL_RS08485 PF00486 Transcriptional regulatory protein, C terminal IL_RS08485 PF00072 Response regulator receiver domain IL_RS08490 PF00586 AIR synthase related protein, N-terminal domain IL_RS08490 PF02769 AIR synthase related protein, C-terminal domain IL_RS08495 PF00551 Formyl transferase IL_RS08500 PF01548 Transposase IL_RS08500 PF02371 Transposase IS116/IS110/IS902 family IL_RS08510 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IL_RS08510 PF02770 Acyl-CoA dehydrogenase, middle domain IL_RS08510 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IL_RS08510 PF09317 Domain of unknown function (DUF1974) IL_RS08515 PF03806 AbgT putative transporter family IL_RS08520 PF07690 Major Facilitator Superfamily IL_RS08525 PF02872 5'-nucleotidase, C-terminal domain IL_RS08525 PF00149 Calcineurin-like phosphoesterase IL_RS08535 PF01351 Ribonuclease HII IL_RS08540 PF03806 AbgT putative transporter family IL_RS08545 PF03806 AbgT putative transporter family IL_RS08550 PF13426 PAS domain IL_RS08550 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IL_RS08550 PF08447 PAS fold IL_RS08575 PF02817 e3 binding domain IL_RS08575 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) IL_RS08575 PF00364 Biotin-requiring enzyme IL_RS08580 PF02780 Transketolase, C-terminal domain IL_RS08580 PF02779 Transketolase, pyrimidine binding domain IL_RS08585 PF00676 Dehydrogenase E1 component IL_RS08585 PF12573 2-oxoisovalerate dehydrogenase E1 alpha subunit N terminal IL_RS08590 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family IL_RS08600 PF00873 AcrB/AcrD/AcrF family IL_RS08605 PF13533 Biotin-lipoyl like IL_RS08610 PF02254 TrkA-N domain IL_RS08610 PF00999 Sodium/hydrogen exchanger family IL_RS08610 PF02080 TrkA-C domain IL_RS08615 PF00990 Diguanylate cyclase, GGDEF domain IL_RS08615 PF07694 5TMR of 5TMR-LYT IL_RS08620 PF11734 TilS substrate C-terminal domain IL_RS08620 PF09179 TilS substrate binding domain IL_RS08620 PF01171 PP-loop family IL_RS08625 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit IL_RS08630 PF01336 OB-fold nucleic acid binding domain IL_RS08630 PF02811 PHP domain IL_RS08630 PF14579 Helix-hairpin-helix motif IL_RS08630 PF17657 Bacterial DNA polymerase III alpha subunit finger domain IL_RS08630 PF07733 Bacterial DNA polymerase III alpha NTPase domain IL_RS08635 PF07992 Pyridine nucleotide-disulphide oxidoreductase IL_RS08640 PF01432 Peptidase family M3 IL_RS08660 PF00929 Exonuclease IL_RS08665 PF00075 RNase H IL_RS08670 PF00581 Rhodanese-like domain IL_RS08675 PF08241 Methyltransferase domain IL_RS08680 PF16123 Hydroxyacylglutathione hydrolase C-terminus IL_RS08680 PF00753 Metallo-beta-lactamase superfamily IL_RS08685 PF01476 LysM domain IL_RS08685 PF01464 Transglycosylase SLT domain IL_RS08695 PF00533 BRCA1 C Terminus (BRCT) domain IL_RS08695 PF03120 NAD-dependent DNA ligase OB-fold domain IL_RS08695 PF01653 NAD-dependent DNA ligase adenylation domain IL_RS08695 PF03119 NAD-dependent DNA ligase C4 zinc finger domain IL_RS08695 PF12826 Helix-hairpin-helix motif IL_RS08700 PF04354 ZipA, C-terminal FtsZ-binding domain IL_RS08705 PF02463 RecF/RecN/SMC N terminal domain IL_RS08715 PF02646 RmuC family IL_RS08725 PF00425 chorismate binding enzyme IL_RS08725 PF04715 Anthranilate synthase component I, N terminal region IL_RS08730 PF00293 NUDIX domain IL_RS08735 PF03315 Serine dehydratase beta chain IL_RS08735 PF03313 Serine dehydratase alpha chain IL_RS08740 PF03466 LysR substrate binding domain IL_RS08740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IL_RS08755 PF01253 Translation initiation factor SUI1 IL_RS08760 PF00072 Response regulator receiver domain IL_RS08760 PF00990 Diguanylate cyclase, GGDEF domain IL_RS08770 PF00072 Response regulator receiver domain IL_RS08775 PF01979 Amidohydrolase family IL_RS08780 PF01979 Amidohydrolase family IL_RS08780 PF13382 Adenine deaminase C-terminal domain IL_RS08800 PF02153 Prephenate dehydrogenase IL_RS08800 PF01817 Chorismate mutase type II IL_RS08805 PF00684 DnaJ central domain IL_RS08805 PF00226 DnaJ domain IL_RS08805 PF01556 DnaJ C terminal domain IL_RS08810 PF01245 Ribosomal protein L19 IL_RS08815 PF01746 tRNA (Guanine-1)-methyltransferase IL_RS08820 PF01782 RimM N-terminal domain IL_RS08820 PF05239 PRC-barrel domain IL_RS08825 PF00886 Ribosomal protein S16 IL_RS08830 PF00448 SRP54-type protein, GTPase domain IL_RS08830 PF02881 SRP54-type protein, helical bundle domain IL_RS08830 PF02978 Signal peptide binding domain IL_RS08840 PF03471 Transporter associated domain IL_RS08840 PF00571 CBS domain IL_RS08840 PF01595 Cyclin M transmembrane N-terminal domain IL_RS08850 PF04262 Glutamate-cysteine ligase IL_RS08855 PF00072 Response regulator receiver domain IL_RS08855 PF01627 Hpt domain IL_RS08855 PF00512 His Kinase A (phospho-acceptor) domain IL_RS08855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IL_RS08855 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) IL_RS08855 PF00672 HAMP domain IL_RS08865 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit IL_RS08870 PF02436 Conserved carboxylase domain IL_RS08870 PF00682 HMGL-like IL_RS08870 PF00364 Biotin-requiring enzyme IL_RS08895 PF02599 Global regulator protein family IL_RS08900 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain IL_RS08900 PF01411 tRNA synthetases class II (A) IL_RS08900 PF02272 DHHA1 domain IL_RS08905 PF02631 RecX family IL_RS08915 PF17151 Periplasmic sensor domain IL_RS08915 PF00990 Diguanylate cyclase, GGDEF domain IL_RS08920 PF04371 Porphyromonas-type peptidyl-arginine deiminase IL_RS08925 PF00849 RNA pseudouridylate synthase IL_RS08925 PF01479 S4 domain IL_RS08930 PF04079 Segregation and condensation complex subunit ScpB IL_RS08935 PF02616 Segregation and condensation protein ScpA IL_RS08940 PF01300 Telomere recombination IL_RS08945 PF02811 PHP domain IL_RS08950 PF07992 Pyridine nucleotide-disulphide oxidoreductase IL_RS08950 PF00724 NADH:flavin oxidoreductase / NADH oxidase family IL_RS08965 PF04715 Anthranilate synthase component I, N terminal region IL_RS08965 PF00425 chorismate binding enzyme IL_RS08970 PF00117 Glutamine amidotransferase class-I IL_RS08975 PF00591 Glycosyl transferase family, a/b domain IL_RS08975 PF02885 Glycosyl transferase family, helical bundle domain IL_RS08980 PF00218 Indole-3-glycerol phosphate synthase IL_RS08980 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase IL_RS08985 PF00291 Pyridoxal-phosphate dependent enzyme IL_RS08990 PF00290 Tryptophan synthase alpha chain IL_RS08995 PF04279 Intracellular septation protein A IL_RS09000 PF03795 YCII-related domain IL_RS09010 PF13194 Domain of unknown function (DUF4010) IL_RS09015 PF14031 Putative serine dehydratase domain IL_RS09015 PF01168 Alanine racemase, N-terminal domain IL_RS09030 PF03330 Lytic transglycolase IL_RS09030 PF05036 Sporulation related domain IL_RS09035 PF08338 Domain of unknown function (DUF1731) IL_RS09035 PF01370 NAD dependent epimerase/dehydratase family IL_RS09045 PF00005 ABC transporter IL_RS09050 PF13472 GDSL-like Lipase/Acylhydrolase family IL_RS09075 PF00484 Carbonic anhydrase IL_RS09080 PF00749 tRNA synthetases class I (E and Q), catalytic domain IL_RS09095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IL_RS09095 PF03466 LysR substrate binding domain IL_RS09100 PF00107 Zinc-binding dehydrogenase IL_RS09100 PF08240 Alcohol dehydrogenase GroES-like domain IL_RS09105 PF00756 Putative esterase IL_RS09110 PF02371 Transposase IS116/IS110/IS902 family IL_RS09110 PF01548 Transposase IL_RS09115 PF02743 Cache domain IL_RS09115 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IL_RS09115 PF00672 HAMP domain IL_RS09120 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain IL_RS09120 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain IL_RS09125 PF01177 Asp/Glu/Hydantoin racemase IL_RS09155 PF00990 Diguanylate cyclase, GGDEF domain IL_RS09155 PF00563 EAL domain IL_RS09155 PF13426 PAS domain IL_RS09160 PF01548 Transposase IL_RS09160 PF02371 Transposase IS116/IS110/IS902 family IL_RS09180 PF17757 UvrB interaction domain IL_RS09180 PF00271 Helicase conserved C-terminal domain IL_RS09180 PF02151 UvrB/uvrC motif IL_RS09180 PF12344 Ultra-violet resistance protein B IL_RS09180 PF04851 Type III restriction enzyme, res subunit IL_RS09185 PF01554 MatE IL_RS09190 PF00155 Aminotransferase class I and II IL_RS09210 PF01569 PAP2 superfamily IL_RS09215 PF02508 Rnf-Nqr subunit, membrane protein IL_RS09220 PF04060 Putative Fe-S cluster IL_RS09225 PF13375 RnfC Barrel sandwich hybrid domain IL_RS09225 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit IL_RS09225 PF13237 4Fe-4S dicluster domain IL_RS09225 PF10531 SLBB domain IL_RS09230 PF03116 NQR2, RnfD, RnfE family IL_RS09235 PF04205 FMN-binding domain IL_RS09240 PF02508 Rnf-Nqr subunit, membrane protein IL_RS09245 PF10576 Iron-sulfur binding domain of endonuclease III IL_RS09245 PF00633 Helix-hairpin-helix motif IL_RS09245 PF00730 HhH-GPD superfamily base excision DNA repair protein IL_RS09250 PF18393 MotY N-terminal domain IL_RS09250 PF00691 OmpA family IL_RS09255 PF00929 Exonuclease IL_RS09260 PF00578 AhpC/TSA family IL_RS09260 PF10417 C-terminal domain of 1-Cys peroxiredoxin IL_RS09265 PF00462 Glutaredoxin IL_RS09270 PF02777 Iron/manganese superoxide dismutases, C-terminal domain IL_RS09270 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain IL_RS09275 PF01609 Transposase DDE domain IL_RS09275 PF13006 Insertion element 4 transposase N-terminal IL_RS09280 PF12697 Alpha/beta hydrolase family IL_RS09285 PF00905 Penicillin binding protein transpeptidase domain IL_RS09340 PF00144 Beta-lactamase IL_RS09340 PF11954 Domain of unknown function (DUF3471) IL_RS09345 PF07676 WD40-like Beta Propeller Repeat IL_RS09355 PF00392 Bacterial regulatory proteins, gntR family IL_RS09355 PF07840 FadR C-terminal domain IL_RS09360 PF02600 Disulfide bond formation protein DsbB IL_RS09365 PF03692 Putative zinc- or iron-chelating domain IL_RS09370 PF13406 Transglycosylase SLT domain IL_RS09375 PF05166 YcgL domain IL_RS09380 PF00570 HRDC domain IL_RS09380 PF01612 3'-5' exonuclease IL_RS09385 PF13193 AMP-binding enzyme C-terminal domain IL_RS09385 PF00501 AMP-binding enzyme IL_RS09405 PF00814 Glycoprotease family IL_RS09410 PF13307 Helicase C-terminal domain IL_RS09410 PF06733 DEAD_2 IL_RS09420 PF08029 HisG, C-terminal domain IL_RS09420 PF01634 ATP phosphoribosyltransferase IL_RS09425 PF00815 Histidinol dehydrogenase IL_RS09430 PF00155 Aminotransferase class I and II IL_RS09435 PF00475 Imidazoleglycerol-phosphate dehydratase IL_RS09440 PF00117 Glutamine amidotransferase class-I IL_RS09445 PF00977 Histidine biosynthesis protein IL_RS09450 PF00977 Histidine biosynthesis protein IL_RS09455 PF01502 Phosphoribosyl-AMP cyclohydrolase IL_RS09455 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase IL_RS09460 PF01554 MatE IL_RS09465 PF12697 Alpha/beta hydrolase family IL_RS09470 PF01124 MAPEG family IL_RS09475 PF05191 Adenylate kinase, active site lid IL_RS09480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IL_RS09480 PF00183 Hsp90 protein IL_RS09485 PF13662 Toprim domain IL_RS09485 PF02132 RecR protein IL_RS09490 PF02575 YbaB/EbfC DNA-binding family IL_RS09495 PF12169 DNA polymerase III subunits gamma and tau domain III IL_RS09495 PF12170 DNA polymerase III tau subunit V interacting with alpha IL_RS09495 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding IL_RS09500 PF00156 Phosphoribosyl transferase domain IL_RS09505 PF00158 Sigma-54 interaction domain IL_RS09505 PF00072 Response regulator receiver domain IL_RS09505 PF02954 Bacterial regulatory protein, Fis family IL_RS09515 PF05114 Protein of unknown function (DUF692) IL_RS09525 PF03544 Gram-negative bacterial TonB protein C-terminal IL_RS09530 PF02472 Biopolymer transport protein ExbD/TolR IL_RS09535 PF01618 MotA/TolQ/ExbB proton channel family IL_RS09555 PF00850 Histone deacetylase domain IL_RS09565 PF00378 Enoyl-CoA hydratase/isomerase IL_RS09570 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III IL_RS09570 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal IL_RS09580 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD IL_RS09585 PF07690 Major Facilitator Superfamily IL_RS09590 PF02558 Ketopantoate reductase PanE/ApbA IL_RS09590 PF08546 Ketopantoate reductase PanE/ApbA C terminal IL_RS09595 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase IL_RS09595 PF00925 GTP cyclohydrolase II IL_RS09600 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region IL_RS09600 PF01872 RibD C-terminal domain IL_RS09605 PF03477 ATP cone domain IL_RS09610 PF00464 Serine hydroxymethyltransferase IL_RS09615 PF00005 ABC transporter IL_RS09615 PF12848 ABC transporter IL_RS09620 PF18073 Rubredoxin metal binding domain IL_RS09640 PF01026 TatD related DNase IL_RS09645 PF16658 Class II release factor RF3, C-terminal domain IL_RS09645 PF00009 Elongation factor Tu GTP binding domain IL_RS09645 PF03144 Elongation factor Tu domain 2 IL_RS09650 PF17200 Single Cache domain 2 IL_RS09650 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IL_RS09650 PF00672 HAMP domain IL_RS09655 PF01676 Metalloenzyme superfamily IL_RS09660 PF02885 Glycosyl transferase family, helical bundle domain IL_RS09660 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain IL_RS09660 PF00591 Glycosyl transferase family, a/b domain IL_RS09665 PF01791 DeoC/LacD family aldolase IL_RS09670 PF00583 Acetyltransferase (GNAT) family IL_RS09685 PF08668 HDOD domain IL_RS09685 PF00563 EAL domain IL_RS09690 PF17243 POTRA domain TamA domain 1 IL_RS09690 PF01103 Surface antigen IL_RS09695 PF04357 TamB, inner membrane protein subunit of TAM complex IL_RS09730 PF01196 Ribosomal protein L17 IL_RS09735 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain IL_RS09735 PF01000 RNA polymerase Rpb3/RpoA insert domain IL_RS09735 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain IL_RS09740 PF00163 Ribosomal protein S4/S9 N-terminal domain IL_RS09740 PF01479 S4 domain IL_RS09745 PF00411 Ribosomal protein S11 IL_RS09750 PF00416 Ribosomal protein S13/S18 IL_RS09755 PF00344 SecY translocase IL_RS09760 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A IL_RS09765 PF00333 Ribosomal protein S5, N-terminal domain IL_RS09765 PF03719 Ribosomal protein S5, C-terminal domain IL_RS09770 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast IL_RS09775 PF00347 Ribosomal protein L6 IL_RS09780 PF00410 Ribosomal protein S8 IL_RS09785 PF00253 Ribosomal protein S14p/S29e IL_RS09790 PF00673 ribosomal L5P family C-terminus IL_RS09790 PF00281 Ribosomal protein L5 IL_RS09795 PF00467 KOW motif IL_RS09795 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 IL_RS09800 PF00238 Ribosomal protein L14p/L23e IL_RS09805 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus IL_RS09805 PF00361 Proton-conducting membrane transporter IL_RS09805 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter IL_RS09805 PF13244 Domain of unknown function (DUF4040) IL_RS09810 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L IL_RS09815 PF00361 Proton-conducting membrane transporter IL_RS09820 PF01899 Na+/H+ ion antiporter subunit IL_RS09825 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) IL_RS09830 PF03334 Na+/H+ antiporter subunit IL_RS09840 PF13006 Insertion element 4 transposase N-terminal IL_RS09840 PF01609 Transposase DDE domain IL_RS09845 PF00366 Ribosomal protein S17 IL_RS09850 PF00831 Ribosomal L29 protein IL_RS09855 PF00252 Ribosomal protein L16p/L10e IL_RS09860 PF07650 KH domain IL_RS09860 PF00189 Ribosomal protein S3, C-terminal domain IL_RS09865 PF00237 Ribosomal protein L22p/L17e IL_RS09870 PF00203 Ribosomal protein S19 IL_RS09875 PF03947 Ribosomal Proteins L2, C-terminal domain IL_RS09875 PF00181 Ribosomal Proteins L2, RNA binding domain IL_RS09880 PF00276 Ribosomal protein L23 IL_RS09885 PF00573 Ribosomal protein L4/L1 family IL_RS09890 PF00297 Ribosomal protein L3 IL_RS09895 PF00338 Ribosomal protein S10p/S20e IL_RS09900 PF01244 Membrane dipeptidase (Peptidase family M19) IL_RS09910 PF01207 Dihydrouridine synthase (Dus) IL_RS09915 PF01475 Ferric uptake regulator family IL_RS09935 PF00772 DnaB-like helicase N terminal domain IL_RS09935 PF03796 DnaB-like helicase C terminal domain IL_RS09950 PF08281 Sigma-70, region 4 IL_RS09950 PF04542 Sigma-70 region 2 IL_RS09955 PF01281 Ribosomal protein L9, N-terminal domain IL_RS09955 PF03948 Ribosomal protein L9, C-terminal domain IL_RS09960 PF01084 Ribosomal protein S18 IL_RS09965 PF00436 Single-strand binding protein family IL_RS09970 PF01250 Ribosomal protein S6 IL_RS09980 PF08032 RNA 2'-O ribose methyltransferase substrate binding IL_RS09980 PF00588 SpoU rRNA Methylase family IL_RS09985 PF00773 RNB domain IL_RS09985 PF17876 Cold shock domain IL_RS09985 PF00575 S1 RNA binding domain IL_RS09985 PF08461 Ribonuclease R winged-helix domain IL_RS09985 PF08206 Ribonuclease B OB domain IL_RS10010 PF03739 Lipopolysaccharide export system permease LptF/LptG IL_RS10015 PF03739 Lipopolysaccharide export system permease LptF/LptG IL_RS10020 PF00883 Cytosol aminopeptidase family, catalytic domain IL_RS10020 PF02789 Cytosol aminopeptidase family, N-terminal domain IL_RS10025 PF04364 DNA polymerase III chi subunit, HolC IL_RS10030 PF00133 tRNA synthetases class I (I, L, M and V) IL_RS10030 PF10458 Valyl tRNA synthetase tRNA binding arm IL_RS10030 PF08264 Anticodon-binding domain of tRNA IL_RS10035 PF06877 Regulator of ribonuclease activity B IL_RS10040 PF01553 Acyltransferase IL_RS10045 PF03989 DNA gyrase C-terminal domain, beta-propeller IL_RS10045 PF00521 DNA gyrase/topoisomerase IV, subunit A IL_RS10050 PF01751 Toprim domain IL_RS10050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IL_RS10050 PF00986 DNA gyrase B subunit, carboxyl terminus IL_RS10050 PF00204 DNA gyrase B IL_RS10055 PF06853 Protein of unknown function (DUF1249) IL_RS10060 PF00293 NUDIX domain IL_RS10065 PF02321 Outer membrane efflux protein IL_RS10070 PF03279 Bacterial lipid A biosynthesis acyltransferase IL_RS10075 PF03710 Glutamate-ammonia ligase adenylyltransferase IL_RS10075 PF08335 GlnD PII-uridylyltransferase IL_RS10080 PF01928 CYTH domain IL_RS10085 PF14850 DNA-binding domain of Proline dehydrogenase IL_RS10085 PF18327 Proline utilization A proline dehydrogenase N-terminal domain IL_RS10085 PF00171 Aldehyde dehydrogenase family IL_RS10085 PF01619 Proline dehydrogenase IL_RS10095 PF12806 Acetyl-CoA dehydrogenase C-terminal like IL_RS10095 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IL_RS10095 PF02770 Acyl-CoA dehydrogenase, middle domain IL_RS10095 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IL_RS10105 PF13401 AAA domain IL_RS10105 PF01471 Putative peptidoglycan binding domain IL_RS10110 PF01743 Poly A polymerase head domain IL_RS10110 PF12627 Probable RNA and SrmB- binding site of polymerase A IL_RS10115 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) IL_RS10115 PF00809 Pterin binding enzyme IL_RS10120 PF02152 Dihydroneopterin aldolase IL_RS10125 PF02660 Glycerol-3-phosphate acyltransferase IL_RS10130 PF00814 Glycoprotease family IL_RS10135 PF01425 Amidase IL_RS10145 PF00437 Type II/IV secretion system protein IL_RS10150 PF01168 Alanine racemase, N-terminal domain IL_RS10155 PF14748 Pyrroline-5-carboxylate reductase dimerisation IL_RS10155 PF03807 NADP oxidoreductase coenzyme F420-dependent IL_RS10160 PF02325 YGGT family IL_RS10170 PF00999 Sodium/hydrogen exchanger family IL_RS10170 PF03471 Transporter associated domain IL_RS10175 PF01725 Ham1 family IL_RS10180 PF04055 Radical SAM superfamily IL_RS10180 PF06969 HemN C-terminal domain IL_RS10185 PF02390 Putative methyltransferase IL_RS10190 PF00691 OmpA family IL_RS10195 PF00730 HhH-GPD superfamily base excision DNA repair protein IL_RS10195 PF00633 Helix-hairpin-helix motif IL_RS10195 PF14815 NUDIX domain IL_RS10200 PF04362 Bacterial Fe(2+) trafficking IL_RS10205 PF01472 PUA domain IL_RS10205 PF00696 Amino acid kinase family IL_RS10210 PF00171 Aldehyde dehydrogenase family IL_RS10215 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) IL_RS10225 PF04244 Deoxyribodipyrimidine photo-lyase-related protein IL_RS10230 PF08212 Lipocalin-like domain IL_RS10235 PF03880 DbpA RNA binding domain IL_RS10235 PF00271 Helicase conserved C-terminal domain IL_RS10235 PF00270 DEAD/DEAH box helicase IL_RS10235 PF12343 Cold shock protein DEAD box A IL_RS10240 PF00171 Aldehyde dehydrogenase family IL_RS10245 PF00171 Aldehyde dehydrogenase family IL_RS10250 PF00085 Thioredoxin IL_RS10255 PF03969 AFG1-like ATPase IL_RS10260 PF00209 Sodium:neurotransmitter symporter family IL_RS10265 PF05127 Helicase IL_RS10265 PF13718 GNAT acetyltransferase 2 IL_RS10265 PF08351 Domain of unknown function (DUF1726) IL_RS10270 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain IL_RS10270 PF00326 Prolyl oligopeptidase family IL_RS10275 PF16653 Saccharopine dehydrogenase C-terminal domain IL_RS10275 PF03435 Saccharopine dehydrogenase NADP binding domain IL_RS10280 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain IL_RS10285 PF08238 Sel1 repeat IL_RS10290 PF03309 Type III pantothenate kinase IL_RS10295 PF03099 Biotin/lipoate A/B protein ligase family IL_RS10295 PF08279 HTH domain IL_RS10295 PF02237 Biotin protein ligase C terminal domain IL_RS10300 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain IL_RS10300 PF01565 FAD binding domain IL_RS10305 PF00512 His Kinase A (phospho-acceptor) domain IL_RS10305 PF09456 RcsC Alpha-Beta-Loop (ABL) IL_RS10305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IL_RS10305 PF00072 Response regulator receiver domain IL_RS10310 PF00196 Bacterial regulatory proteins, luxR family IL_RS10310 PF00072 Response regulator receiver domain IL_RS10315 PF13193 AMP-binding enzyme C-terminal domain IL_RS10315 PF16177 Acetyl-coenzyme A synthetase N-terminus IL_RS10315 PF00501 AMP-binding enzyme IL_RS10325 PF02541 Ppx/GppA phosphatase family IL_RS10330 PF13089 Polyphosphate kinase N-terminal domain IL_RS10330 PF17941 Polyphosphate kinase C-terminal domain 1 IL_RS10330 PF02503 Polyphosphate kinase middle domain IL_RS10330 PF13090 Polyphosphate kinase C-terminal domain 2 IL_RS10335 PF00245 Alkaline phosphatase IL_RS10340 PF02601 Exonuclease VII, large subunit IL_RS10340 PF13742 OB-fold nucleic acid binding domain IL_RS10345 PF00561 alpha/beta hydrolase fold IL_RS10350 PF01053 Cys/Met metabolism PLP-dependent enzyme IL_RS10355 PF00924 Mechanosensitive ion channel IL_RS10355 PF05552 Conserved TM helix IL_RS10365 PF04612 Type II secretion system (T2SS), protein M IL_RS10370 PF05134 Type II secretion system (T2SS), protein L IL_RS10370 PF12693 GspL periplasmic domain IL_RS10375 PF03934 Type II secretion system (T2SS), protein K IL_RS10380 PF11612 Type II secretion system (T2SS), protein J IL_RS10380 PF07963 Prokaryotic N-terminal methylation motif IL_RS10385 PF02501 Type II secretion system (T2SS), protein I IL_RS10385 PF07963 Prokaryotic N-terminal methylation motif IL_RS10390 PF12019 Type II transport protein GspH IL_RS10390 PF07963 Prokaryotic N-terminal methylation motif IL_RS10395 PF08334 Type II secretion system (T2SS), protein G IL_RS10395 PF07963 Prokaryotic N-terminal methylation motif IL_RS10400 PF00482 Type II secretion system (T2SS), protein F IL_RS10405 PF00437 Type II/IV secretion system protein IL_RS10410 PF00263 Bacterial type II and III secretion system protein IL_RS10410 PF03958 Bacterial type II/III secretion system short domain IL_RS10415 PF11356 Type II secretion system protein C IL_RS10420 PF01479 S4 domain IL_RS10425 PF01430 Hsp33 protein IL_RS10430 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal IL_RS10430 PF01926 50S ribosome-binding GTPase IL_RS10435 PF13360 PQQ-like domain IL_RS10440 PF09976 Tetratricopeptide repeat-like domain IL_RS10445 PF03129 Anticodon binding domain IL_RS10445 PF13393 Histidyl-tRNA synthetase IL_RS10450 PF04551 GcpE protein IL_RS10455 PF13464 Domain of unknown function (DUF4115) IL_RS10465 PF04055 Radical SAM superfamily IL_RS10470 PF00334 Nucleoside diphosphate kinase IL_RS10475 PF01625 Peptide methionine sulfoxide reductase IL_RS10480 PF00266 Aminotransferase class-V IL_RS10485 PF02082 Transcriptional regulator IL_RS10490 PF00588 SpoU rRNA Methylase family IL_RS10495 PF00459 Inositol monophosphatase family IL_RS10530 PF01292 Prokaryotic cytochrome b561 IL_RS10545 PF14743 DNA ligase OB-like domain IL_RS10545 PF01068 ATP dependent DNA ligase domain IL_RS10550 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB IL_RS10555 PF01381 Helix-turn-helix IL_RS10565 PF00005 ABC transporter IL_RS10575 PF02687 FtsX-like permease family IL_RS10575 PF12704 MacB-like periplasmic core domain IL_RS10580 PF00072 Response regulator receiver domain IL_RS10580 PF00158 Sigma-54 interaction domain IL_RS10580 PF02954 Bacterial regulatory protein, Fis family IL_RS10585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IL_RS10585 PF00512 His Kinase A (phospho-acceptor) domain IL_RS10595 PF08447 PAS fold IL_RS10595 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IL_RS10595 PF13426 PAS domain IL_RS10600 PF00990 Diguanylate cyclase, GGDEF domain IL_RS10615 PF13302 Acetyltransferase (GNAT) domain IL_RS10665 PF12848 ABC transporter IL_RS10665 PF00005 ABC transporter IL_RS10675 PF00881 Nitroreductase family IL_RS10695 PF01809 Putative membrane protein insertion efficiency factor IL_RS10750 PF02347 Glycine cleavage system P-protein IL_RS10755 PF01597 Glycine cleavage H-protein IL_RS10760 PF01571 Aminomethyltransferase folate-binding domain IL_RS10760 PF08669 Glycine cleavage T-protein C-terminal barrel domain IL_RS10765 PF03466 LysR substrate binding domain IL_RS10765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IL_RS10770 PF01494 FAD binding domain IL_RS10775 PF01494 FAD binding domain IL_RS10780 PF05195 Aminopeptidase P, N-terminal domain IL_RS10780 PF00557 Metallopeptidase family M24 IL_RS10785 PF03695 Uncharacterised protein family (UPF0149) IL_RS10790 PF05164 Cell division protein ZapA IL_RS10795 PF01979 Amidohydrolase family IL_RS10800 PF01812 5-formyltetrahydrofolate cyclo-ligase family IL_RS10805 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) IL_RS10810 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IL_RS10810 PF01842 ACT domain IL_RS10810 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain IL_RS10815 PF01895 PhoU domain IL_RS10820 PF00005 ABC transporter IL_RS10825 PF00528 Binding-protein-dependent transport system inner membrane component IL_RS10830 PF00528 Binding-protein-dependent transport system inner membrane component IL_RS10835 PF12849 PBP superfamily domain IL_RS10840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IL_RS10840 PF11808 Phosphate regulon sensor protein PhoR IL_RS10840 PF00989 PAS fold IL_RS10840 PF00512 His Kinase A (phospho-acceptor) domain IL_RS10845 PF00486 Transcriptional regulatory protein, C terminal IL_RS10845 PF00072 Response regulator receiver domain IL_RS10855 PF13609 Gram-negative porin IL_RS10865 PF03544 Gram-negative bacterial TonB protein C-terminal IL_RS10870 PF02472 Biopolymer transport protein ExbD/TolR IL_RS10875 PF01618 MotA/TolQ/ExbB proton channel family IL_RS10880 PF01618 MotA/TolQ/ExbB proton channel family IL_RS10890 PF00512 His Kinase A (phospho-acceptor) domain IL_RS10890 PF00497 Bacterial extracellular solute-binding proteins, family 3 IL_RS10890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IL_RS10895 PF04381 Putative exonuclease, RdgC IL_RS10910 PF01022 Bacterial regulatory protein, arsR family IL_RS10915 PF01758 Sodium Bile acid symporter family IL_RS10920 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain IL_RS10920 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain IL_RS10935 PF00916 Sulfate permease family IL_RS10935 PF01740 STAS domain IL_RS10940 PF00582 Universal stress protein family IL_RS10945 PF00271 Helicase conserved C-terminal domain IL_RS10945 PF00270 DEAD/DEAH box helicase IL_RS10955 PF02926 THUMP domain IL_RS10955 PF02568 Thiamine biosynthesis protein (ThiI) IL_RS10960 PF00691 OmpA family IL_RS10960 PF13677 Membrane MotB of proton-channel complex MotA/MotB IL_RS10965 PF01618 MotA/TolQ/ExbB proton channel family IL_RS10970 PF02609 Exonuclease VII small subunit IL_RS10975 PF00348 Polyprenyl synthetase IL_RS10980 PF02779 Transketolase, pyrimidine binding domain IL_RS10980 PF02780 Transketolase, C-terminal domain IL_RS10980 PF13292 1-deoxy-D-xylulose-5-phosphate synthase IL_RS10985 PF04608 Phosphatidylglycerophosphatase A IL_RS10990 PF02769 AIR synthase related protein, C-terminal domain IL_RS10990 PF00586 AIR synthase related protein, N-terminal domain IL_RS10995 PF01029 NusB family IL_RS11000 PF00885 6,7-dimethyl-8-ribityllumazine synthase IL_RS11020 PF03883 Peroxide stress protein YaaA IL_RS11025 PF07549 SecD/SecF GG Motif IL_RS11025 PF02355 Protein export membrane protein IL_RS11030 PF07549 SecD/SecF GG Motif IL_RS11030 PF02355 Protein export membrane protein IL_RS11030 PF13721 SecD export protein N-terminal TM region IL_RS11035 PF02699 Preprotein translocase subunit IL_RS11040 PF02954 Bacterial regulatory protein, Fis family IL_RS11040 PF00158 Sigma-54 interaction domain IL_RS11040 PF01590 GAF domain IL_RS11045 PF03458 UPF0126 domain IL_RS11050 PF00672 HAMP domain IL_RS11050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IL_RS11050 PF00512 His Kinase A (phospho-acceptor) domain IL_RS11050 PF01627 Hpt domain IL_RS11050 PF00072 Response regulator receiver domain IL_RS11055 PF00196 Bacterial regulatory proteins, luxR family IL_RS11055 PF00072 Response regulator receiver domain IL_RS11060 PF00593 TonB dependent receptor IL_RS11060 PF07715 TonB-dependent Receptor Plug Domain IL_RS11070 PF13193 AMP-binding enzyme C-terminal domain IL_RS11070 PF00501 AMP-binding enzyme IL_RS11075 PF00561 alpha/beta hydrolase fold IL_RS11090 PF18030 RimK PreATP-grasp domain IL_RS11090 PF08443 RimK-like ATP-grasp domain IL_RS11095 PF00583 Acetyltransferase (GNAT) family IL_RS11100 PF03009 Glycerophosphoryl diester phosphodiesterase family IL_RS11105 PF00291 Pyridoxal-phosphate dependent enzyme IL_RS11110 PF00543 Nitrogen regulatory protein P-II IL_RS11115 PF00909 Ammonium Transporter Family IL_RS11125 PF01594 AI-2E family transporter IL_RS11130 PF03707 Bacterial signalling protein N terminal repeat IL_RS11130 PF00990 Diguanylate cyclase, GGDEF domain IL_RS11130 PF00563 EAL domain IL_RS11135 PF00563 EAL domain IL_RS11135 PF00990 Diguanylate cyclase, GGDEF domain IL_RS11135 PF03707 Bacterial signalling protein N terminal repeat IL_RS11145 PF02371 Transposase IS116/IS110/IS902 family IL_RS11145 PF01548 Transposase IL_RS11150 PF00672 HAMP domain IL_RS11150 PF02743 Cache domain IL_RS11150 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IL_RS11165 PF00924 Mechanosensitive ion channel IL_RS11170 PF16655 PhoD-like phosphatase, N-terminal domain IL_RS11170 PF09423 PhoD-like phosphatase IL_RS11175 PF00593 TonB dependent receptor IL_RS11175 PF07715 TonB-dependent Receptor Plug Domain IL_RS11185 PF00266 Aminotransferase class-V IL_RS11195 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding IL_RS11195 PF18381 YcaO cyclodehydratase C-terminal domain IL_RS11235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IL_RS11235 PF03466 LysR substrate binding domain IL_RS11245 PF02525 Flavodoxin-like fold IL_RS11250 PF03466 LysR substrate binding domain IL_RS11250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IL_RS11290 PF04546 Sigma-70, non-essential region IL_RS11290 PF04545 Sigma-70, region 4 IL_RS11290 PF04539 Sigma-70 region 3 IL_RS11290 PF04542 Sigma-70 region 2 IL_RS11290 PF03979 Sigma-70 factor, region 1.1 IL_RS11290 PF00140 Sigma-70 factor, region 1.2 IL_RS11295 PF10410 DnaB-helicase binding domain of primase IL_RS11295 PF08278 DNA primase DnaG DnaB-binding IL_RS11295 PF08275 DNA primase catalytic core, N-terminal domain IL_RS11295 PF01807 CHC2 zinc finger IL_RS11300 PF01165 Ribosomal protein S21 IL_RS11310 PF03793 PASTA domain IL_RS11310 PF00069 Protein kinase domain IL_RS11315 PF01702 Queuine tRNA-ribosyltransferase IL_RS11320 PF02547 Queuosine biosynthesis protein IL_RS11325 PF01384 Phosphate transporter family IL_RS11330 PF01865 Protein of unknown function DUF47 IL_RS11335 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IL_RS11345 PF01116 Fructose-bisphosphate aldolase class-II IL_RS11350 PF00162 Phosphoglycerate kinase IL_RS11355 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain IL_RS11355 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain IL_RS11360 PF02779 Transketolase, pyrimidine binding domain IL_RS11360 PF02780 Transketolase, C-terminal domain IL_RS11360 PF00456 Transketolase, thiamine diphosphate binding domain IL_RS11365 PF02772 S-adenosylmethionine synthetase, central domain IL_RS11365 PF00438 S-adenosylmethionine synthetase, N-terminal domain IL_RS11365 PF02773 S-adenosylmethionine synthetase, C-terminal domain IL_RS11370 PF04452 RNA methyltransferase IL_RS11375 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain IL_RS11375 PF02951 Prokaryotic glutathione synthetase, N-terminal domain IL_RS11380 PF02622 Uncharacterized ACR, COG1678 IL_RS11385 PF03652 Holliday junction resolvase IL_RS11400 PF02562 PhoH-like protein IL_RS11400 PF13638 PIN domain IL_RS11405 PF18337 RapA N-terminal Tudor like domain IL_RS11405 PF18339 RapA N-terminal Tudor like domain 1 IL_RS11405 PF00176 SNF2 family N-terminal domain IL_RS11405 PF00271 Helicase conserved C-terminal domain IL_RS11405 PF12137 RNA polymerase recycling family C-terminal IL_RS11410 PF00849 RNA pseudouridylate synthase IL_RS11420 PF00226 DnaJ domain IL_RS11420 PF05099 Tellurite resistance protein TerB IL_RS11425 PF00483 Nucleotidyl transferase IL_RS11430 PF01636 Phosphotransferase enzyme family IL_RS11435 PF04453 LPS transport system D IL_RS11435 PF03968 OstA-like protein IL_RS11440 PF09312 SurA N-terminal domain IL_RS11440 PF00639 PPIC-type PPIASE domain IL_RS11445 PF04166 Pyridoxal phosphate biosynthetic protein PdxA IL_RS11450 PF00398 Ribosomal RNA adenine dimethylase IL_RS11455 PF04379 ApaG domain IL_RS11460 PF00149 Calcineurin-like phosphoesterase IL_RS11465 PF00672 HAMP domain IL_RS11465 PF16591 Helical bimodular sensor domain IL_RS11465 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IL_RS11470 PF00579 tRNA synthetases class I (W and Y) IL_RS11470 PF01479 S4 domain IL_RS11475 PF08525 Opacity-associated protein A N-terminal motif IL_RS11475 PF01476 LysM domain IL_RS11475 PF01551 Peptidase family M23 IL_RS11480 PF03702 Anhydro-N-acetylmuramic acid kinase IL_RS11485 PF00557 Metallopeptidase family M24 IL_RS11490 PF01521 Iron-sulphur cluster biosynthesis IL_RS11500 PF00654 Voltage gated chloride channel IL_RS11505 PF03653 Uncharacterised protein family (UPF0093) IL_RS11510 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain IL_RS11510 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain IL_RS11515 PF00202 Aminotransferase class-III IL_RS11520 PF00905 Penicillin binding protein transpeptidase domain IL_RS11520 PF00912 Transglycosylase IL_RS11520 PF14814 Bifunctional transglycosylase second domain IL_RS11525 PF00270 DEAD/DEAH box helicase IL_RS11525 PF04408 Helicase associated domain (HA2) IL_RS11525 PF00271 Helicase conserved C-terminal domain IL_RS11525 PF08482 ATP-dependent helicase C-terminal IL_RS11530 PF00883 Cytosol aminopeptidase family, catalytic domain IL_RS11530 PF12404 Peptidase IL_RS11535 PF03749 Sugar fermentation stimulation protein RE domain IL_RS11535 PF17746 SfsA N-terminal OB domain IL_RS11540 PF01258 Prokaryotic dksA/traR C4-type zinc finger IL_RS11545 PF00749 tRNA synthetases class I (E and Q), catalytic domain IL_RS11550 PF12626 Polymerase A arginine-rich C-terminus IL_RS11550 PF01743 Poly A polymerase head domain IL_RS11550 PF12627 Probable RNA and SrmB- binding site of polymerase A IL_RS11555 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) IL_RS11560 PF02548 Ketopantoate hydroxymethyltransferase IL_RS11565 PF02569 Pantoate-beta-alanine ligase IL_RS11570 PF00282 Pyridoxal-dependent decarboxylase conserved domain IL_RS11580 PF01061 ABC-2 type transporter IL_RS11585 PF00005 ABC transporter IL_RS11590 PF02441 Flavoprotein IL_RS11595 PF01225 Mur ligase family, catalytic domain IL_RS11595 PF02875 Mur ligase family, glutamate ligase domain IL_RS11595 PF08245 Mur ligase middle domain IL_RS11600 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain IL_RS11605 PF00719 Inorganic pyrophosphatase IL_RS11610 PF00005 ABC transporter IL_RS11625 PF00990 Diguanylate cyclase, GGDEF domain IL_RS11625 PF08448 PAS fold IL_RS11625 PF08447 PAS fold IL_RS11625 PF00563 EAL domain IL_RS11645 PF00593 TonB dependent receptor IL_RS11645 PF07715 TonB-dependent Receptor Plug Domain IL_RS11650 PF01548 Transposase IL_RS11650 PF02371 Transposase IS116/IS110/IS902 family IL_RS11680 PF05958 tRNA (Uracil-5-)-methyltransferase IL_RS11690 PF00152 tRNA synthetases class II (D, K and N) IL_RS11695 PF09285 Elongation factor P, C-terminal IL_RS11695 PF08207 Elongation factor P (EF-P) KOW-like domain IL_RS11695 PF01132 Elongation factor P (EF-P) OB domain IL_RS11700 PF04055 Radical SAM superfamily IL_RS11715 PF00118 TCP-1/cpn60 chaperonin family IL_RS11720 PF00166 Chaperonin 10 Kd subunit IL_RS11725 PF03091 CutA1 divalent ion tolerance protein IL_RS11730 PF11412 Disulphide bond corrector protein DsbC IL_RS11730 PF02683 Cytochrome C biogenesis protein transmembrane region IL_RS11735 PF01220 Dehydroquinase class II IL_RS11740 PF00364 Biotin-requiring enzyme IL_RS11745 PF00289 Biotin carboxylase, N-terminal domain IL_RS11745 PF02785 Biotin carboxylase C-terminal domain IL_RS11745 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain IL_RS11755 PF01207 Dihydrouridine synthase (Dus) IL_RS11760 PF02954 Bacterial regulatory protein, Fis family IL_RS11765 PF02142 MGS-like domain IL_RS11765 PF01808 AICARFT/IMPCHase bienzyme IL_RS11775 PF02844 Phosphoribosylglycinamide synthetase, N domain IL_RS11775 PF02843 Phosphoribosylglycinamide synthetase, C domain IL_RS11775 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain IL_RS11780 PF00563 EAL domain IL_RS11780 PF12792 CSS motif domain associated with EAL IL_RS11785 PF04219 Protein of unknown function, DUF IL_RS11795 PF01566 Natural resistance-associated macrophage protein IL_RS11800 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain IL_RS11800 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain IL_RS11805 PF00850 Histone deacetylase domain IL_RS11810 PF00375 Sodium:dicarboxylate symporter family IL_RS11825 PF00929 Exonuclease IL_RS11830 PF03193 RsgA GTPase IL_RS11835 PF02666 Phosphatidylserine decarboxylase IL_RS11845 PF00873 AcrB/AcrD/AcrF family IL_RS11850 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IL_RS11855 PF01208 Uroporphyrinogen decarboxylase (URO-D) IL_RS11860 PF00293 NUDIX domain IL_RS11860 PF09297 NADH pyrophosphatase zinc ribbon domain IL_RS11865 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ IL_RS11870 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IL_RS11870 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase IL_RS11880 PF04102 SlyX IL_RS11885 PF00485 Phosphoribulokinase / Uridine kinase family IL_RS11890 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ IL_RS11895 PF02566 OsmC-like protein IL_RS11905 PF00171 Aldehyde dehydrogenase family IL_RS11910 PF04958 Arginine N-succinyltransferase beta subunit IL_RS11915 PF00202 Aminotransferase class-III IL_RS11930 PF00117 Glutamine amidotransferase class-I IL_RS11935 PF00563 EAL domain IL_RS11935 PF00990 Diguanylate cyclase, GGDEF domain IL_RS11935 PF13426 PAS domain IL_RS11940 PF00579 tRNA synthetases class I (W and Y) IL_RS11945 PF00834 Ribulose-phosphate 3 epimerase family IL_RS11960 PF01432 Peptidase family M3 IL_RS11965 PF00326 Prolyl oligopeptidase family IL_RS11965 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region IL_RS11970 PF07992 Pyridine nucleotide-disulphide oxidoreductase IL_RS11970 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IL_RS11980 PF02678 Pirin IL_RS11980 PF05726 Pirin C-terminal cupin domain IL_RS11985 PF02694 Uncharacterised BCR, YnfA/UPF0060 family IL_RS12000 PF00675 Insulinase (Peptidase family M16) IL_RS12000 PF16187 Middle or third domain of peptidase_M16 IL_RS12000 PF05193 Peptidase M16 inactive domain IL_RS12010 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain IL_RS12010 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase IL_RS12015 PF00593 TonB dependent receptor IL_RS12020 PF00990 Diguanylate cyclase, GGDEF domain IL_RS12025 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 IL_RS12030 PF00578 AhpC/TSA family IL_RS12030 PF10417 C-terminal domain of 1-Cys peroxiredoxin IL_RS12035 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IL_RS12035 PF00672 HAMP domain IL_RS12035 PF02743 Cache domain IL_RS12040 PF03707 Bacterial signalling protein N terminal repeat IL_RS12040 PF00990 Diguanylate cyclase, GGDEF domain IL_RS12040 PF00563 EAL domain IL_RS12055 PF00762 Ferrochelatase IL_RS12065 PF00571 CBS domain IL_RS12065 PF01595 Cyclin M transmembrane N-terminal domain IL_RS12075 PF00581 Rhodanese-like domain IL_RS12075 PF17773 UPF0176 acylphosphatase like domain IL_RS12080 PF00210 Ferritin-like domain IL_RS12100 PF04973 Nicotinamide mononucleotide transporter IL_RS12110 PF07715 TonB-dependent Receptor Plug Domain IL_RS12115 PF00970 Oxidoreductase FAD-binding domain IL_RS12115 PF00175 Oxidoreductase NAD-binding domain IL_RS12120 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase IL_RS12125 PF07498 Rho termination factor, N-terminal domain IL_RS12125 PF07497 Rho termination factor, RNA-binding domain IL_RS12125 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IL_RS12130 PF00085 Thioredoxin IL_RS12135 PF00271 Helicase conserved C-terminal domain IL_RS12135 PF00270 DEAD/DEAH box helicase IL_RS12140 PF02541 Ppx/GppA phosphatase family IL_RS12145 PF00490 Delta-aminolevulinic acid dehydratase IL_RS12150 PF00360 Phytochrome region IL_RS12150 PF00563 EAL domain IL_RS12150 PF01590 GAF domain IL_RS12150 PF00990 Diguanylate cyclase, GGDEF domain IL_RS12155 PF01026 TatD related DNase IL_RS12160 PF00902 Sec-independent protein translocase protein (TatC) IL_RS12165 PF02416 mttA/Hcf106 family IL_RS12170 PF02416 mttA/Hcf106 family IL_RS12175 PF03109 ABC1 family IL_RS12185 PF01209 ubiE/COQ5 methyltransferase family IL_RS12190 PF00271 Helicase conserved C-terminal domain IL_RS12190 PF17191 RecG wedge domain IL_RS12190 PF00270 DEAD/DEAH box helicase IL_RS12195 PF00588 SpoU rRNA Methylase family IL_RS12195 PF12105 SpoU, rRNA methylase, C-terminal IL_RS12200 PF08668 HDOD domain IL_RS12200 PF00563 EAL domain IL_RS12205 PF00583 Acetyltransferase (GNAT) family IL_RS12205 PF00795 Carbon-nitrogen hydrolase IL_RS12215 PF01042 Endoribonuclease L-PSP IL_RS12220 PF04607 Region found in RelA / SpoT proteins IL_RS12220 PF13291 ACT domain IL_RS12220 PF02824 TGS domain IL_RS12225 PF01192 RNA polymerase Rpb6 IL_RS12230 PF00625 Guanylate kinase IL_RS12235 PF07690 Major Facilitator Superfamily IL_RS12240 PF00440 Bacterial regulatory proteins, tetR family IL_RS12245 PF00989 PAS fold IL_RS12250 PF00501 AMP-binding enzyme IL_RS12250 PF13193 AMP-binding enzyme C-terminal domain IL_RS12260 PF02028 BCCT, betaine/carnitine/choline family transporter IL_RS12275 PF02082 Transcriptional regulator IL_RS12285 PF07715 TonB-dependent Receptor Plug Domain IL_RS12285 PF00593 TonB dependent receptor IL_RS12295 PF13520 Amino acid permease IL_RS12300 PF00939 Sodium:sulfate symporter transmembrane region IL_RS12305 PF08274 PhnA Zinc-Ribbon IL_RS12305 PF03831 PhnA domain IL_RS12320 PF08245 Mur ligase middle domain IL_RS12335 PF13533 Biotin-lipoyl like IL_RS12340 PF00005 ABC transporter IL_RS12365 PF01894 Uncharacterised protein family UPF0047 IL_RS12385 PF03707 Bacterial signalling protein N terminal repeat IL_RS12385 PF00990 Diguanylate cyclase, GGDEF domain IL_RS12385 PF00563 EAL domain IL_RS12400 PF02661 Fic/DOC family IL_RS12405 PF01810 LysE type translocator IL_RS12420 PF03755 YicC-like family, N-terminal region IL_RS12420 PF08340 Domain of unknown function (DUF1732) IL_RS12425 PF00561 alpha/beta hydrolase fold IL_RS12430 PF08281 Sigma-70, region 4 IL_RS12430 PF04542 Sigma-70 region 2 IL_RS12435 PF01713 Smr domain IL_RS12440 PF01138 3' exoribonuclease family, domain 1 IL_RS12440 PF03725 3' exoribonuclease family, domain 2 IL_RS12445 PF00156 Phosphoribosyl transferase domain IL_RS12450 PF02371 Transposase IS116/IS110/IS902 family IL_RS12450 PF01548 Transposase IL_RS12455 PF03575 Peptidase family S51 IL_RS12465 PF00588 SpoU rRNA Methylase family IL_RS12470 PF16916 Dimerisation domain of Zinc Transporter IL_RS12470 PF01545 Cation efflux family IL_RS12475 PF12146 Serine aminopeptidase, S33 IL_RS12480 PF00672 HAMP domain IL_RS12480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IL_RS12480 PF16527 Two-component sensor protein CpxA, periplasmic domain IL_RS12480 PF00512 His Kinase A (phospho-acceptor) domain IL_RS12485 PF00072 Response regulator receiver domain IL_RS12485 PF00486 Transcriptional regulatory protein, C terminal IL_RS12490 PF00072 Response regulator receiver domain IL_RS12490 PF02954 Bacterial regulatory protein, Fis family IL_RS12490 PF00158 Sigma-54 interaction domain IL_RS12495 PF00989 PAS fold IL_RS12495 PF00512 His Kinase A (phospho-acceptor) domain IL_RS12495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IL_RS12500 PF03951 Glutamine synthetase, beta-Grasp domain IL_RS12500 PF00120 Glutamine synthetase, catalytic domain IL_RS12505 PF03144 Elongation factor Tu domain 2 IL_RS12505 PF00009 Elongation factor Tu GTP binding domain IL_RS12505 PF00679 Elongation factor G C-terminus IL_RS12510 PF03006 Haemolysin-III related IL_RS12520 PF00440 Bacterial regulatory proteins, tetR family IL_RS12520 PF08361 MAATS-type transcriptional repressor, C-terminal region IL_RS12525 PF02308 MgtC family IL_RS12545 PF00106 short chain dehydrogenase IL_RS12550 PF03631 Virulence factor BrkB IL_RS12555 PF02580 D-Tyr-tRNA(Tyr) deacylase IL_RS12560 PF09500 Putative thioesterase (yiiD_Cterm) IL_RS12560 PF00583 Acetyltransferase (GNAT) family IL_RS12565 PF00221 Aromatic amino acid lyase IL_RS12570 PF17391 Urocanase N-terminal domain IL_RS12570 PF17392 Urocanase C-terminal domain IL_RS12570 PF01175 Urocanase Rossmann-like domain IL_RS12575 PF07702 UTRA domain IL_RS12575 PF00392 Bacterial regulatory proteins, gntR family IL_RS12580 PF01979 Amidohydrolase family IL_RS12590 PF03737 Aldolase/RraA IL_RS12595 PF00990 Diguanylate cyclase, GGDEF domain IL_RS12595 PF03707 Bacterial signalling protein N terminal repeat IL_RS12595 PF00563 EAL domain IL_RS12600 PF07724 AAA domain (Cdc48 subfamily) IL_RS12600 PF10431 C-terminal, D2-small domain, of ClpB protein IL_RS12600 PF00004 ATPase family associated with various cellular activities (AAA) IL_RS12605 PF00227 Proteasome subunit IL_RS12615 PF03485 Arginyl tRNA synthetase N terminal domain IL_RS12615 PF05746 DALR anticodon binding domain IL_RS12615 PF00750 tRNA synthetases class I (R) IL_RS12620 PF17764 3′ DNA-binding domain (3′BD) IL_RS12620 PF00270 DEAD/DEAH box helicase IL_RS12620 PF18074 Primosomal protein N C-terminal domain IL_RS12620 PF00271 Helicase conserved C-terminal domain IL_RS12620 PF18319 PriA DNA helicase Cys-rich region (CRR) domain IL_RS12625 PF01197 Ribosomal protein L31 IL_RS12630 PF03949 Malic enzyme, NAD binding domain IL_RS12630 PF00390 Malic enzyme, N-terminal domain IL_RS12635 PF02371 Transposase IS116/IS110/IS902 family IL_RS12635 PF01548 Transposase IL_RS12640 PF01340 Met Apo-repressor, MetJ IL_RS12645 PF03447 Homoserine dehydrogenase, NAD binding domain IL_RS12645 PF00742 Homoserine dehydrogenase IL_RS12645 PF00696 Amino acid kinase family IL_RS12650 PF17092 Penicillin-binding protein OB-like domain IL_RS12650 PF00912 Transglycosylase IL_RS12650 PF00905 Penicillin binding protein transpeptidase domain IL_RS12670 PF03958 Bacterial type II/III secretion system short domain IL_RS12670 PF00263 Bacterial type II and III secretion system protein IL_RS12675 PF01202 Shikimate kinase IL_RS12680 PF01761 3-dehydroquinate synthase IL_RS12690 PF02086 D12 class N6 adenine-specific DNA methyltransferase IL_RS12695 PF13673 Acetyltransferase (GNAT) domain IL_RS12700 PF04445 Putative SAM-dependent methyltransferase IL_RS12705 PF08534 Redoxin IL_RS12720 PF01037 Lrp/AsnC ligand binding domain IL_RS12730 PF01979 Amidohydrolase family IL_RS12750 PF00990 Diguanylate cyclase, GGDEF domain IL_RS12755 PF00593 TonB dependent receptor IL_RS12755 PF07715 TonB-dependent Receptor Plug Domain IL_RS12760 PF02253 Phospholipase A1 IL_RS12765 PF00593 TonB dependent receptor IL_RS12765 PF07715 TonB-dependent Receptor Plug Domain IL_RS12770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IL_RS12770 PF03466 LysR substrate binding domain IL_RS12775 PF13460 NAD(P)H-binding IL_RS12780 PF00313 'Cold-shock' DNA-binding domain IL_RS12785 PF00990 Diguanylate cyclase, GGDEF domain IL_RS12810 PF03167 Uracil DNA glycosylase superfamily IL_RS12820 PF00970 Oxidoreductase FAD-binding domain IL_RS12820 PF00175 Oxidoreductase NAD-binding domain IL_RS12840 PF02080 TrkA-C domain IL_RS12840 PF03600 Citrate transporter IL_RS12860 PF13847 Methyltransferase domain IL_RS12865 PF10459 Peptidase S46 IL_RS12870 PF07660 Secretin and TonB N terminus short domain IL_RS12870 PF07715 TonB-dependent Receptor Plug Domain IL_RS12870 PF00593 TonB dependent receptor IL_RS12885 PF07715 TonB-dependent Receptor Plug Domain IL_RS12885 PF00593 TonB dependent receptor IL_RS12890 PF02677 Epoxyqueuosine reductase QueH IL_RS12900 PF01850 PIN domain IL_RS12910 PF13286 Phosphohydrolase-associated domain IL_RS12910 PF01966 HD domain IL_RS12915 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB IL_RS12920 PF01381 Helix-turn-helix IL_RS12955 PF00145 C-5 cytosine-specific DNA methylase IL_RS12960 PF09208 Restriction endonuclease MspI IL_RS12965 PF13538 UvrD-like helicase C-terminal domain IL_RS12970 PF13361 UvrD-like helicase C-terminal domain IL_RS12970 PF00580 UvrD/REP helicase N-terminal domain IL_RS12970 PF12705 PD-(D/E)XK nuclease superfamily IL_RS12975 PF17946 RecC C-terminal domain IL_RS12985 PF01810 LysE type translocator IL_RS12990 PF00990 Diguanylate cyclase, GGDEF domain IL_RS13010 PF01212 Beta-eliminating lyase IL_RS13020 PF00664 ABC transporter transmembrane region IL_RS13020 PF00005 ABC transporter IL_RS13035 PF00011 Hsp20/alpha crystallin family IL_RS13040 PF00563 EAL domain IL_RS13040 PF00990 Diguanylate cyclase, GGDEF domain IL_RS13040 PF01590 GAF domain IL_RS13040 PF00360 Phytochrome region IL_RS13050 PF09382 RQC domain IL_RS13050 PF00270 DEAD/DEAH box helicase IL_RS13050 PF00570 HRDC domain IL_RS13050 PF00271 Helicase conserved C-terminal domain IL_RS13050 PF16124 RecQ zinc-binding IL_RS13055 PF03061 Thioesterase superfamily IL_RS13060 PF00892 EamA-like transporter family IL_RS13065 PF02566 OsmC-like protein IL_RS13070 PF13361 UvrD-like helicase C-terminal domain IL_RS13070 PF00580 UvrD/REP helicase N-terminal domain IL_RS13075 PF13419 Haloacid dehalogenase-like hydrolase IL_RS13080 PF00589 Phage integrase family IL_RS13080 PF02899 Phage integrase, N-terminal SAM-like domain IL_RS13090 PF01678 Diaminopimelate epimerase IL_RS13095 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain IL_RS13095 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain IL_RS13100 PF03900 Porphobilinogen deaminase, C-terminal domain IL_RS13100 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain IL_RS13105 PF02602 Uroporphyrinogen-III synthase HemD IL_RS13120 PF04264 YceI-like domain IL_RS13125 PF01292 Prokaryotic cytochrome b561 IL_RS13130 PF01548 Transposase IL_RS13130 PF02371 Transposase IS116/IS110/IS902 family IL_RS13160 PF00132 Bacterial transferase hexapeptide (six repeats) IL_RS13165 PF07733 Bacterial DNA polymerase III alpha NTPase domain IL_RS13165 PF17657 Bacterial DNA polymerase III alpha subunit finger domain IL_RS13165 PF02811 PHP domain IL_RS13165 PF14579 Helix-hairpin-helix motif IL_RS13180 PF01553 Acyltransferase IL_RS13185 PF00924 Mechanosensitive ion channel IL_RS13190 PF01323 DSBA-like thioredoxin domain IL_RS13195 PF01636 Phosphotransferase enzyme family IL_RS13200 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase IL_RS13200 PF12801 4Fe-4S binding domain IL_RS13200 PF13746 4Fe-4S dicluster domain IL_RS13205 PF01546 Peptidase family M20/M25/M40 IL_RS13210 PF02627 Carboxymuconolactone decarboxylase family IL_RS13215 PF00578 AhpC/TSA family IL_RS13220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IL_RS13220 PF03466 LysR substrate binding domain IL_RS13225 PF01645 Conserved region in glutamate synthase IL_RS13230 PF07995 Glucose / Sorbosone dehydrogenase IL_RS13235 PF07715 TonB-dependent Receptor Plug Domain IL_RS13235 PF00593 TonB dependent receptor IL_RS13245 PF02954 Bacterial regulatory protein, Fis family IL_RS13245 PF00072 Response regulator receiver domain IL_RS13245 PF00158 Sigma-54 interaction domain IL_RS13250 PF00512 His Kinase A (phospho-acceptor) domain IL_RS13250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IL_RS13250 PF00989 PAS fold IL_RS13260 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain IL_RS13260 PF00205 Thiamine pyrophosphate enzyme, central domain IL_RS13260 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain IL_RS13270 PF01545 Cation efflux family IL_RS13275 PF07715 TonB-dependent Receptor Plug Domain IL_RS13275 PF00593 TonB dependent receptor IL_RS13290 PF03773 Predicted permease IL_RS13300 PF00455 DeoR C terminal sensor domain IL_RS13300 PF08220 DeoR-like helix-turn-helix domain IL_RS13310 PF05506 Domain of unknown function (DUF756) IL_RS13310 PF04185 Phosphoesterase family IL_RS13375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IL_RS13375 PF17203 Single cache domain 3 IL_RS13375 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain IL_RS13380 PF02384 N-6 DNA Methylase IL_RS13385 PF18623 TnsE C-terminal domain IL_RS13390 PF06527 TniQ IL_RS13390 PF15978 Tn7-like transposition protein D IL_RS13395 PF13401 AAA domain IL_RS13395 PF11426 Tn7 transposition regulator TnsC IL_RS13400 PF00665 Integrase core domain IL_RS13405 PF08721 TnsA endonuclease C terminal IL_RS13405 PF08722 TnsA endonuclease N terminal IL_RS13420 PF01380 SIS domain IL_RS13425 PF00132 Bacterial transferase hexapeptide (six repeats) IL_RS13425 PF14602 Hexapeptide repeat of succinyl-transferase IL_RS13425 PF12804 MobA-like NTP transferase domain IL_RS13430 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain IL_RS13430 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain IL_RS13435 PF02874 ATP synthase alpha/beta family, beta-barrel domain IL_RS13435 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IL_RS13440 PF00231 ATP synthase IL_RS13445 PF02874 ATP synthase alpha/beta family, beta-barrel domain IL_RS13445 PF00306 ATP synthase alpha/beta chain, C terminal domain IL_RS13445 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IL_RS13450 PF00213 ATP synthase delta (OSCP) subunit IL_RS13455 PF00430 ATP synthase B/B' CF(0) IL_RS13460 PF00137 ATP synthase subunit C IL_RS13465 PF00119 ATP synthase A chain IL_RS13475 PF02195 ParB-like nuclease domain IL_RS13475 PF17762 HTH domain found in ParB protein IL_RS13480 PF13614 AAA domain IL_RS13485 PF02527 rRNA small subunit methyltransferase G IL_RS13490 PF13932 GidA associated domain IL_RS13490 PF01134 Glucose inhibited division protein A IL_RS13495 PF00258 Flavodoxin IL_RS13505 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IL_RS13510 PF01541 GIY-YIG catalytic domain IL_RS13515 PF04632 Fusaric acid resistance protein family IL_RS13520 PF10396 GTP-binding protein TrmE N-terminus IL_RS13520 PF12631 MnmE helical domain IL_RS13520 PF01926 50S ribosome-binding GTPase IL_RS13525 PF14849 YidC periplasmic domain IL_RS13525 PF02096 60Kd inner membrane protein IL_RS13530 PF00825 Ribonuclease P IL_RS13535 PF00468 Ribosomal protein L34