IL_RS00020 SM00382 ATPases associated with a variety of cellular activities IL_RS00020 SM00760 Bacterial dnaA protein helix-turn-helix domain IL_RS00025 SM00480 DNA polymerase III beta subunit IL_RS00035 SM00387 Histidine kinase-like ATPases IL_RS00035 SM00433 TopoisomeraseII IL_RS00140 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs IL_RS00140 SM00474 3'-5' exonuclease IL_RS00140 SM00475 5'-3' exonuclease IL_RS00140 SM00482 DNA polymerase A domain IL_RS00175 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). IL_RS00180 SM00357 Cold shock protein domain IL_RS00190 SM01001 AIR carboxylase IL_RS00215 SM01005 Alanine racemase, C-terminal domain IL_RS00290 SM00530 Helix-turn-helix XRE-family like proteins IL_RS00300 SM00530 Helix-turn-helix XRE-family like proteins IL_RS00310 SM00421 helix_turn_helix, Lux Regulon IL_RS00360 SM00342 helix_turn_helix, arabinose operon control protein IL_RS00415 SM00347 helix_turn_helix multiple antibiotic resistance protein IL_RS00470 SM01236 IL_RS00470 IL_RS00475 SM00822 IL_RS00475 IL_RS00485 SM00448 cheY-homologous receiver domain IL_RS00485 SM00862 Transcriptional regulatory protein, C terminal IL_RS00490 SM00387 Histidine kinase-like ATPases IL_RS00490 SM00388 His Kinase A (phosphoacceptor) domain IL_RS00500 SM00342 helix_turn_helix, arabinose operon control protein IL_RS00510 SM00267 diguanylate cyclase IL_RS00535 SM00506 Appr-1"-p processing enzyme IL_RS00585 SM00382 ATPases associated with a variety of cellular activities IL_RS00640 SM00563 Phosphate acyltransferases IL_RS00710 SM00825 Beta-ketoacyl synthase IL_RS00720 SM00822 IL_RS00720 IL_RS00725 SM00825 Beta-ketoacyl synthase IL_RS00740 SM00244 prohibitin homologues IL_RS00745 SM00052 Putative diguanylate phosphodiesterase IL_RS00775 SM00382 ATPases associated with a variety of cellular activities IL_RS00785 SM00421 helix_turn_helix, Lux Regulon IL_RS00815 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins IL_RS00840 SM00448 cheY-homologous receiver domain IL_RS00845 SM00387 Histidine kinase-like ATPases IL_RS00855 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor IL_RS00885 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). IL_RS00895 SM00861 Transketolase, pyrimidine binding domain IL_RS00905 SM00100 Cyclic nucleotide-monophosphate binding domain IL_RS00905 SM00419 helix_turn_helix, cAMP Regulatory protein IL_RS00920 SM00421 helix_turn_helix, Lux Regulon IL_RS00920 SM00448 cheY-homologous receiver domain IL_RS00930 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain IL_RS00930 SM00387 Histidine kinase-like ATPases IL_RS00960 SM00729 Elongator protein 3, MiaB family, Radical SAM IL_RS00990 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. IL_RS00990 SM00382 ATPases associated with a variety of cellular activities IL_RS01005 SM00631 IL_RS01005 IL_RS01020 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). IL_RS01020 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain IL_RS01040 SM00052 Putative diguanylate phosphodiesterase IL_RS01040 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. IL_RS01040 SM00267 diguanylate cyclase IL_RS01085 SM00382 ATPases associated with a variety of cellular activities IL_RS01145 SM00382 ATPases associated with a variety of cellular activities IL_RS01145 SM00962 SRP54-type protein, GTPase domain IL_RS01145 SM00963 SRP54-type protein, helical bundle domain IL_RS01150 SM00382 ATPases associated with a variety of cellular activities IL_RS01180 SM00450 Rhodanese Homology Domain IL_RS01225 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. IL_RS01235 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain IL_RS01235 SM01232 IL_RS01235 IL_RS01330 SM00563 Phosphate acyltransferases IL_RS01355 SM00450 Rhodanese Homology Domain IL_RS01360 SM00829 Enoylreductase IL_RS01385 SM00382 ATPases associated with a variety of cellular activities IL_RS01420 SM00316 Ribosomal protein S1-like RNA-binding domain IL_RS01420 SM00732 Likely ribonuclease with RNase H fold. IL_RS01465 SM01322 IL_RS01465 IL_RS01480 SM00046 Diacylglycerol kinase catalytic domain (presumed) IL_RS01490 SM00387 Histidine kinase-like ATPases IL_RS01495 SM00448 cheY-homologous receiver domain IL_RS01495 SM00850 LytTr DNA-binding domain IL_RS01505 SM00267 diguanylate cyclase IL_RS01545 SM00345 helix_turn_helix gluconate operon transcriptional repressor IL_RS01545 SM00895 IL_RS01545 IL_RS01575 SM00382 ATPases associated with a variety of cellular activities IL_RS01585 SM00421 helix_turn_helix, Lux Regulon IL_RS01585 SM00448 cheY-homologous receiver domain IL_RS01590 SM00829 Enoylreductase IL_RS01605 SM00052 Putative diguanylate phosphodiesterase IL_RS01605 SM00062 Bacterial periplasmic substrate-binding proteins IL_RS01605 SM00267 diguanylate cyclase IL_RS01615 SM00448 cheY-homologous receiver domain IL_RS01615 SM00862 Transcriptional regulatory protein, C terminal IL_RS01620 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain IL_RS01620 SM00387 Histidine kinase-like ATPases IL_RS01620 SM00388 His Kinase A (phosphoacceptor) domain IL_RS01645 SM00382 ATPases associated with a variety of cellular activities IL_RS01665 SM00257 Lysin motif IL_RS01665 SM00646 IL_RS01665 IL_RS01670 SM00853 MutL C terminal dimerisation domain IL_RS01670 SM01340 IL_RS01670 IL_RS01690 SM00244 prohibitin homologues IL_RS01695 SM00244 prohibitin homologues IL_RS01700 SM00788 Adenylosuccinate synthetase IL_RS01740 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. IL_RS01740 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. IL_RS01745 SM00649 Ribosomal protein L11/L12 IL_RS01770 SM00663 RNA polymerase I subunit A N-terminus IL_RS01785 SM00838 Elongation factor G C-terminus IL_RS01785 SM00889 Elongation factor G, domain IV IL_RS01825 SM00347 helix_turn_helix multiple antibiotic resistance protein IL_RS01875 SM00965 Secretin and TonB N terminus short domain IL_RS01880 SM00382 ATPases associated with a variety of cellular activities IL_RS01885 SM00028 Tetratricopeptide repeats IL_RS01890 SM00382 ATPases associated with a variety of cellular activities IL_RS01935 SM00560 LamG-like jellyroll fold domain IL_RS01965 SM00316 Ribosomal protein S1-like RNA-binding domain IL_RS01995 SM00116 Domain in cystathionine beta-synthase and other proteins. IL_RS01995 SM00924 MgtE intracellular N domain IL_RS02025 SM00382 ATPases associated with a variety of cellular activities IL_RS02045 SM00116 Domain in cystathionine beta-synthase and other proteins. IL_RS02055 SM00382 ATPases associated with a variety of cellular activities IL_RS02090 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. IL_RS02095 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. IL_RS02145 SM00749 bacterial OsmY and nodulation domain IL_RS02170 SM00052 Putative diguanylate phosphodiesterase IL_RS02170 SM00267 diguanylate cyclase IL_RS02170 SM01079 IL_RS02170 IL_RS02240 SM00842 Cell division protein FtsA IL_RS02245 SM00864 Tubulin/FtsZ family, GTPase domain IL_RS02245 SM00865 Tubulin/FtsZ family, C-terminal domain IL_RS02265 SM00957 SecA DEAD-like domain IL_RS02265 SM00958 SecA preprotein cross-linking domain IL_RS02300 SM00382 ATPases associated with a variety of cellular activities IL_RS02315 SM00644 IL_RS02315 IL_RS02325 SM00345 helix_turn_helix gluconate operon transcriptional repressor IL_RS02325 SM00895 IL_RS02325 IL_RS02445 SM00382 ATPases associated with a variety of cellular activities IL_RS02465 SM00996 S-adenosyl-L-homocysteine hydrolase IL_RS02465 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain IL_RS02495 SM00448 cheY-homologous receiver domain IL_RS02500 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain IL_RS02500 SM00387 Histidine kinase-like ATPases IL_RS02540 SM00052 Putative diguanylate phosphodiesterase IL_RS02550 SM00927 DNA mismatch repair enzyme MutH IL_RS02560 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. IL_RS02580 SM01321 IL_RS02580 IL_RS02590 SM00448 cheY-homologous receiver domain IL_RS02595 SM00091 PAS domain IL_RS02610 SM00893 Electron transfer flavoprotein domain IL_RS02615 SM00893 Electron transfer flavoprotein domain IL_RS02635 SM00858 IL_RS02635 IL_RS02650 SM00986 Uracil DNA glycosylase superfamily IL_RS02650 SM00987 UreE urease accessory protein, C-terminal domain IL_RS02690 SM00849 Metallo-beta-lactamase superfamily IL_RS02690 SM01027 Beta-Casp domain IL_RS02725 SM00382 ATPases associated with a variety of cellular activities IL_RS02730 SM00984 UDP binding domain IL_RS02740 SM00382 ATPases associated with a variety of cellular activities IL_RS02760 SM00822 IL_RS02760 IL_RS02805 SM00116 Domain in cystathionine beta-synthase and other proteins. IL_RS02820 SM00984 UDP binding domain IL_RS02930 SM00116 Domain in cystathionine beta-synthase and other proteins. IL_RS02930 SM01240 IL_RS02930 IL_RS02975 SM00062 Bacterial periplasmic substrate-binding proteins IL_RS02990 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. IL_RS02990 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. IL_RS02995 SM01211 IL_RS02995 IL_RS03010 SM00849 Metallo-beta-lactamase superfamily IL_RS03030 SM00919 Malic enzyme, NAD binding domain IL_RS03030 SM01274 IL_RS03030 IL_RS03060 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. IL_RS03060 SM00387 Histidine kinase-like ATPases IL_RS03090 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). IL_RS03090 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain IL_RS03100 SM00859 Semialdehyde dehydrogenase, NAD binding domain IL_RS03125 SM00849 Metallo-beta-lactamase superfamily IL_RS03150 SM00382 ATPases associated with a variety of cellular activities IL_RS03195 SM00422 helix_turn_helix, mercury resistance IL_RS03260 SM00487 DEAD-like helicases superfamily IL_RS03280 SM00954 Region found in RelA / SpoT proteins IL_RS03320 SM00278 Helix-hairpin-helix DNA-binding motif class 1 IL_RS03320 SM00465 GIY-YIG type nucleases (URI domain) IL_RS03325 SM00421 helix_turn_helix, Lux Regulon IL_RS03330 SM00478 endonuclease III IL_RS03385 SM00382 ATPases associated with a variety of cellular activities IL_RS03395 SM00843 IL_RS03395 IL_RS03400 SM00344 helix_turn_helix ASNC type IL_RS03405 SM01002 Alanine dehydrogenase/PNT, C-terminal domain IL_RS03405 SM01003 Alanine dehydrogenase/PNT, N-terminal domain IL_RS03425 SM00316 Ribosomal protein S1-like RNA-binding domain IL_RS03430 SM00382 ATPases associated with a variety of cellular activities IL_RS03430 SM01086 C-terminal, D2-small domain, of ClpB protein IL_RS03440 SM00357 Cold shock protein domain IL_RS03520 SM00822 IL_RS03520 IL_RS03535 SM00344 helix_turn_helix ASNC type IL_RS03540 SM00631 IL_RS03540 IL_RS03560 SM00382 ATPases associated with a variety of cellular activities IL_RS03565 SM00829 Enoylreductase IL_RS03630 SM00992 Hemimethylated DNA-binding protein YccV like IL_RS03680 SM00091 PAS domain IL_RS03680 SM00382 ATPases associated with a variety of cellular activities IL_RS03725 SM00382 ATPases associated with a variety of cellular activities IL_RS03745 SM00382 ATPases associated with a variety of cellular activities IL_RS03750 SM00382 ATPases associated with a variety of cellular activities IL_RS03770 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. IL_RS03775 SM00382 ATPases associated with a variety of cellular activities IL_RS03785 SM00533 DNA-binding domain of DNA mismatch repair MUTS family IL_RS03785 SM00534 ATPase domain of DNA mismatch repair MUTS family IL_RS03795 SM00257 Lysin motif IL_RS03840 SM00052 Putative diguanylate phosphodiesterase IL_RS03840 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) IL_RS03840 SM00091 PAS domain IL_RS03840 SM00267 diguanylate cyclase IL_RS03860 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. IL_RS03915 SM00876 Biotin and Thiamin Synthesis associated domain IL_RS03925 SM01192 IL_RS03925 IL_RS03925 SM01193 IL_RS03925 IL_RS04020 SM00564 beta-propeller repeat IL_RS04080 SM00422 helix_turn_helix, mercury resistance IL_RS04095 SM00954 Region found in RelA / SpoT proteins IL_RS04125 SM00358 Double-stranded RNA binding motif IL_RS04125 SM00535 Ribonuclease III family IL_RS04135 SM00838 Elongation factor G C-terminus IL_RS04190 SM00937 IL_RS04190 IL_RS04220 SM00829 Enoylreductase IL_RS04225 SM00028 Tetratricopeptide repeats IL_RS04225 SM00448 cheY-homologous receiver domain IL_RS04260 SM00935 Outer membrane protein (OmpH-like) IL_RS04270 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. IL_RS04315 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. IL_RS04360 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. IL_RS04365 SM00267 diguanylate cyclase IL_RS04385 SM01329 IL_RS04385 IL_RS04410 SM00822 IL_RS04410 IL_RS04445 SM00422 helix_turn_helix, mercury resistance IL_RS04465 SM00878 Biotin carboxylase C-terminal domain IL_RS04465 SM01209 IL_RS04465 IL_RS04480 SM00052 Putative diguanylate phosphodiesterase IL_RS04480 SM00267 diguanylate cyclase IL_RS04490 SM00528 Domain in histone-like proteins of HNS family IL_RS04545 SM00463 Small MutS-related domain IL_RS04550 SM00855 Phosphoglycerate mutase family IL_RS04595 SM00858 IL_RS04595 IL_RS04655 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. IL_RS04655 SM00245 tail specific protease IL_RS04690 SM00448 cheY-homologous receiver domain IL_RS04700 SM00937 IL_RS04700 IL_RS04720 SM01400 IL_RS04720 IL_RS04750 SM00052 Putative diguanylate phosphodiesterase IL_RS04750 SM00267 diguanylate cyclase IL_RS04750 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain IL_RS04805 SM00729 Elongator protein 3, MiaB family, Radical SAM IL_RS04820 SM00116 Domain in cystathionine beta-synthase and other proteins. IL_RS04820 SM01091 Transporter associated domain IL_RS04885 SM00936 Penicillin-binding protein 5, C-terminal domain IL_RS04900 SM00729 Elongator protein 3, MiaB family, Radical SAM IL_RS04915 SM00028 Tetratricopeptide repeats IL_RS04920 SM00316 Ribosomal protein S1-like RNA-binding domain IL_RS04920 SM00322 K homology RNA-binding domain IL_RS04925 SM01387 IL_RS04925 IL_RS04945 SM00316 Ribosomal protein S1-like RNA-binding domain IL_RS04985 SM00382 ATPases associated with a variety of cellular activities IL_RS04995 SM01103 IL_RS04995 IL_RS05010 SM00851 MGS-like domain IL_RS05010 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain IL_RS05015 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain IL_RS05035 SM00271 DnaJ molecular chaperone homology domain IL_RS05070 SM00052 Putative diguanylate phosphodiesterase IL_RS05070 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) IL_RS05070 SM00091 PAS domain IL_RS05070 SM00267 diguanylate cyclase IL_RS05100 SM00327 von Willebrand factor (vWF) type A domain IL_RS05105 SM00028 Tetratricopeptide repeats IL_RS05120 SM00411 bacterial (prokaryotic) histone like domain IL_RS05125 SM00382 ATPases associated with a variety of cellular activities IL_RS05125 SM00464 Found in ATP-dependent protease La (LON) IL_RS05130 SM00382 ATPases associated with a variety of cellular activities IL_RS05130 SM00994 ClpX C4-type zinc finger IL_RS05130 SM01086 C-terminal, D2-small domain, of ClpB protein IL_RS05180 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain IL_RS05180 SM00437 Bacterial DNA topoisomerase I DNA-binding domain IL_RS05180 SM00493 IL_RS05180 IL_RS05225 SM00859 Semialdehyde dehydrogenase, NAD binding domain IL_RS05235 SM00825 Beta-ketoacyl synthase IL_RS05280 SM00563 Phosphate acyltransferases IL_RS05295 SM00840 IL_RS05295 IL_RS05340 SM00450 Rhodanese Homology Domain IL_RS05370 SM00900 IL_RS05370 IL_RS05435 SM00382 ATPases associated with a variety of cellular activities IL_RS05470 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). IL_RS05530 SM00028 Tetratricopeptide repeats IL_RS05565 SM00382 ATPases associated with a variety of cellular activities IL_RS05570 SM00278 Helix-hairpin-helix DNA-binding motif class 1 IL_RS05590 SM00062 Bacterial periplasmic substrate-binding proteins IL_RS05590 SM00267 diguanylate cyclase IL_RS05620 SM00448 cheY-homologous receiver domain IL_RS05670 SM00382 ATPases associated with a variety of cellular activities IL_RS05690 SM00260 Two component signalling adaptor domain IL_RS05695 SM00260 Two component signalling adaptor domain IL_RS05705 SM00448 cheY-homologous receiver domain IL_RS05710 SM00073 Histidine Phosphotransfer domain IL_RS05710 SM00260 Two component signalling adaptor domain IL_RS05710 SM00387 Histidine kinase-like ATPases IL_RS05710 SM01231 IL_RS05710 IL_RS05720 SM00448 cheY-homologous receiver domain IL_RS05735 SM00382 ATPases associated with a variety of cellular activities IL_RS05735 SM00962 SRP54-type protein, GTPase domain IL_RS05785 SM00904 Riboflavin kinase IL_RS05835 SM00047 Lysozyme subfamily 2 IL_RS05880 SM00138 Methyltransferase, chemotaxis proteins IL_RS05885 SM00260 Two component signalling adaptor domain IL_RS05885 SM00448 cheY-homologous receiver domain IL_RS05890 SM00858 IL_RS05890 IL_RS05930 SM00382 ATPases associated with a variety of cellular activities IL_RS05965 SM00342 helix_turn_helix, arabinose operon control protein IL_RS06025 SM00479 IL_RS06025 IL_RS06030 SM00116 Domain in cystathionine beta-synthase and other proteins. IL_RS06075 SM00382 ATPases associated with a variety of cellular activities IL_RS06075 SM01086 C-terminal, D2-small domain, of ClpB protein IL_RS06085 SM00363 S4 RNA-binding domain IL_RS06095 SM00938 Nitrogen regulatory protein P-II IL_RS06155 SM00382 ATPases associated with a variety of cellular activities IL_RS06180 SM00382 ATPases associated with a variety of cellular activities IL_RS06180 SM00448 cheY-homologous receiver domain IL_RS06185 SM00091 PAS domain IL_RS06185 SM00387 Histidine kinase-like ATPases IL_RS06185 SM00388 His Kinase A (phosphoacceptor) domain IL_RS06190 SM00382 ATPases associated with a variety of cellular activities IL_RS06200 SM00421 helix_turn_helix, Lux Regulon IL_RS06200 SM00448 cheY-homologous receiver domain IL_RS06285 SM00938 Nitrogen regulatory protein P-II IL_RS06390 SM00422 helix_turn_helix, mercury resistance IL_RS06480 SM00448 cheY-homologous receiver domain IL_RS06480 SM00850 LytTr DNA-binding domain IL_RS06505 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain IL_RS06510 SM00631 IL_RS06510 IL_RS06530 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. IL_RS06540 SM00945 ProQ/FINO family IL_RS06545 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. IL_RS06545 SM00245 tail specific protease IL_RS06590 SM00981 IL_RS06590 IL_RS06600 SM00382 ATPases associated with a variety of cellular activities IL_RS06660 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). IL_RS06660 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain IL_RS06660 SM01049 IL_RS06660 IL_RS06745 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. IL_RS06750 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase IL_RS06770 SM01150 IL_RS06770 IL_RS06800 SM00729 Elongator protein 3, MiaB family, Radical SAM IL_RS06800 SM00876 Biotin and Thiamin Synthesis associated domain IL_RS06830 SM00870 IL_RS06830 IL_RS06880 SM00822 IL_RS06880 IL_RS06885 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. IL_RS06920 SM00363 S4 RNA-binding domain IL_RS06925 SM00316 Ribosomal protein S1-like RNA-binding domain IL_RS06935 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family IL_RS06950 SM00411 bacterial (prokaryotic) histone like domain IL_RS06955 SM00316 Ribosomal protein S1-like RNA-binding domain IL_RS06980 SM00434 DNA Topoisomerase IV IL_RS07015 SM00382 ATPases associated with a variety of cellular activities IL_RS07015 SM00487 DEAD-like helicases superfamily IL_RS07015 SM00490 helicase superfamily c-terminal domain IL_RS07015 SM00847 Helicase associated domain (HA2) Add an annotation IL_RS07130 SM00464 Found in ATP-dependent protease La (LON) IL_RS07145 SM00411 bacterial (prokaryotic) histone like domain IL_RS07150 SM00873 B3/4 domain IL_RS07150 SM00874 tRNA synthetase B5 domain IL_RS07150 SM00896 Ferredoxin-fold anticodon binding domain IL_RS07175 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain IL_RS07225 SM00091 PAS domain IL_RS07225 SM00382 ATPases associated with a variety of cellular activities IL_RS07250 SM00487 DEAD-like helicases superfamily IL_RS07250 SM00490 helicase superfamily c-terminal domain IL_RS07265 SM00631 IL_RS07265 IL_RS07280 SM00100 Cyclic nucleotide-monophosphate binding domain IL_RS07280 SM00116 Domain in cystathionine beta-synthase and other proteins. IL_RS07285 SM00479 IL_RS07285 IL_RS07290 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). IL_RS07325 SM00345 helix_turn_helix gluconate operon transcriptional repressor IL_RS07325 SM00895 IL_RS07325 IL_RS07385 SM00829 Enoylreductase IL_RS07390 SM00267 diguanylate cyclase IL_RS07395 SM00849 Metallo-beta-lactamase superfamily IL_RS07405 SM00155 Phospholipase D. Active site motifs. IL_RS07415 SM00382 ATPases associated with a variety of cellular activities IL_RS07420 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) IL_RS07420 SM00091 PAS domain IL_RS07420 SM00387 Histidine kinase-like ATPases IL_RS07420 SM00388 His Kinase A (phosphoacceptor) domain IL_RS07420 SM00448 cheY-homologous receiver domain IL_RS07485 SM01130 IL_RS07485 IL_RS07580 SM00797 Allophanate hydrolase subunit 2 IL_RS07585 SM00796 Allophanate hydrolase subunit 1 IL_RS07645 SM00487 DEAD-like helicases superfamily IL_RS07645 SM00490 helicase superfamily c-terminal domain IL_RS07650 SM00052 Putative diguanylate phosphodiesterase IL_RS07655 SM00091 PAS domain IL_RS07655 SM00267 diguanylate cyclase IL_RS07690 SM00881 CoA binding domain IL_RS07705 SM00861 Transketolase, pyrimidine binding domain IL_RS07755 SM00382 ATPases associated with a variety of cellular activities IL_RS07775 SM00382 ATPases associated with a variety of cellular activities IL_RS07790 SM00487 DEAD-like helicases superfamily IL_RS07790 SM00490 helicase superfamily c-terminal domain IL_RS07790 SM00982 IL_RS07790 IL_RS07790 SM01058 CarD-like/TRCF domain IL_RS07800 SM00347 helix_turn_helix multiple antibiotic resistance protein IL_RS07875 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. IL_RS07880 SM00052 Putative diguanylate phosphodiesterase IL_RS07880 SM00267 diguanylate cyclase IL_RS07890 SM00849 Metallo-beta-lactamase superfamily IL_RS07890 SM01027 Beta-Casp domain IL_RS07905 SM00091 PAS domain IL_RS07905 SM00267 diguanylate cyclase IL_RS07915 SM00487 DEAD-like helicases superfamily IL_RS07915 SM00490 helicase superfamily c-terminal domain IL_RS07935 SM00903 Flavin reductase like domain IL_RS07990 SM00749 bacterial OsmY and nodulation domain IL_RS08120 SM00849 Metallo-beta-lactamase superfamily IL_RS08180 SM00829 Enoylreductase IL_RS08225 SM00530 Helix-turn-helix XRE-family like proteins IL_RS08275 SM00506 Appr-1"-p processing enzyme IL_RS08400 SM00422 helix_turn_helix, mercury resistance IL_RS08420 SM00387 Histidine kinase-like ATPases IL_RS08420 SM00388 His Kinase A (phosphoacceptor) domain IL_RS08425 SM00448 cheY-homologous receiver domain IL_RS08425 SM00862 Transcriptional regulatory protein, C terminal IL_RS08480 SM00387 Histidine kinase-like ATPases IL_RS08480 SM00388 His Kinase A (phosphoacceptor) domain IL_RS08485 SM00448 cheY-homologous receiver domain IL_RS08485 SM00862 Transcriptional regulatory protein, C terminal IL_RS08550 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) IL_RS08550 SM00091 PAS domain IL_RS08550 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). IL_RS08580 SM00861 Transketolase, pyrimidine binding domain IL_RS08615 SM00267 diguanylate cyclase IL_RS08620 SM00977 TilS substrate C-terminal domain IL_RS08630 SM00481 DNA polymerase alpha chain like domain IL_RS08660 SM00479 IL_RS08660 IL_RS08670 SM00450 Rhodanese Homology Domain IL_RS08680 SM00849 Metallo-beta-lactamase superfamily IL_RS08685 SM00257 Lysin motif IL_RS08695 SM00278 Helix-hairpin-helix DNA-binding motif class 1 IL_RS08695 SM00292 breast cancer carboxy-terminal domain IL_RS08695 SM00532 Ligase N family IL_RS08700 SM00771 ZipA, C-terminal domain (FtsZ-binding) IL_RS08745 SM00387 Histidine kinase-like ATPases IL_RS08760 SM00331 Sigma factor PP2C-like phosphatases IL_RS08760 SM00448 cheY-homologous receiver domain IL_RS08770 SM00448 cheY-homologous receiver domain IL_RS08795 SM00448 cheY-homologous receiver domain IL_RS08800 SM00830 Chorismate mutase type II IL_RS08805 SM00271 DnaJ molecular chaperone homology domain IL_RS08830 SM00382 ATPases associated with a variety of cellular activities IL_RS08830 SM00962 SRP54-type protein, GTPase domain IL_RS08830 SM00963 SRP54-type protein, helical bundle domain IL_RS08840 SM01091 Transporter associated domain IL_RS08855 SM00387 Histidine kinase-like ATPases IL_RS08855 SM00388 His Kinase A (phosphoacceptor) domain IL_RS08855 SM00448 cheY-homologous receiver domain IL_RS08900 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain IL_RS08915 SM00028 Tetratricopeptide repeats IL_RS08915 SM00267 diguanylate cyclase IL_RS08925 SM00363 S4 RNA-binding domain IL_RS08945 SM00481 DNA polymerase alpha chain like domain IL_RS09015 SM01119 IL_RS09015 IL_RS09045 SM00382 ATPases associated with a variety of cellular activities IL_RS09075 SM00947 Carbonic anhydrase IL_RS09100 SM00829 Enoylreductase IL_RS09115 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). IL_RS09115 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain IL_RS09115 SM01358 IL_RS09115 IL_RS09155 SM00052 Putative diguanylate phosphodiesterase IL_RS09180 SM00487 DEAD-like helicases superfamily IL_RS09180 SM00490 helicase superfamily c-terminal domain IL_RS09210 SM00014 Acid phosphatase homologues IL_RS09235 SM00900 IL_RS09235 IL_RS09245 SM00478 endonuclease III IL_RS09245 SM00525 IL_RS09245 IL_RS09255 SM00479 IL_RS09255 IL_RS09345 SM00862 Transcriptional regulatory protein, C terminal IL_RS09355 SM00345 helix_turn_helix gluconate operon transcriptional repressor IL_RS09380 SM00341 Helicase and RNase D C-terminal IL_RS09380 SM00474 3'-5' exonuclease IL_RS09410 SM00487 DEAD-like helicases superfamily IL_RS09410 SM00491 IL_RS09410 IL_RS09480 SM00387 Histidine kinase-like ATPases IL_RS09485 SM00493 IL_RS09485 IL_RS09495 SM00382 ATPases associated with a variety of cellular activities IL_RS09505 SM00448 cheY-homologous receiver domain IL_RS09520 SM00028 Tetratricopeptide repeats IL_RS09615 SM00382 ATPases associated with a variety of cellular activities IL_RS09620 SM00382 ATPases associated with a variety of cellular activities IL_RS09650 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). IL_RS09650 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain IL_RS09650 SM01049 IL_RS09650 IL_RS09660 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain IL_RS09665 SM01133 IL_RS09665 IL_RS09735 SM00662 RNA polymerases D IL_RS09740 SM00363 S4 RNA-binding domain IL_RS09740 SM01390 IL_RS09740 IL_RS09795 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. IL_RS09800 SM01374 IL_RS09800 IL_RS09860 SM00322 K homology RNA-binding domain IL_RS09875 SM01382 IL_RS09875 IL_RS09875 SM01383 IL_RS09875 IL_RS09895 SM01403 IL_RS09895 IL_RS09935 SM00382 ATPases associated with a variety of cellular activities IL_RS09980 SM00967 RNA 2'-O ribose methyltransferase substrate binding IL_RS09985 SM00316 Ribosomal protein S1-like RNA-binding domain IL_RS09985 SM00357 Cold shock protein domain IL_RS09985 SM00955 IL_RS09985 IL_RS10040 SM00563 Phosphate acyltransferases IL_RS10045 SM00434 DNA Topoisomerase IV IL_RS10050 SM00387 Histidine kinase-like ATPases IL_RS10050 SM00433 TopoisomeraseII IL_RS10080 SM01118 IL_RS10080 IL_RS10105 SM00382 ATPases associated with a variety of cellular activities IL_RS10120 SM00905 Dihydroneopterin aldolase IL_RS10125 SM01207 IL_RS10125 IL_RS10145 SM00382 ATPases associated with a variety of cellular activities IL_RS10170 SM01091 Transporter associated domain IL_RS10180 SM00729 Elongator protein 3, MiaB family, Radical SAM IL_RS10195 SM00478 endonuclease III IL_RS10195 SM00525 IL_RS10195 IL_RS10205 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase IL_RS10235 SM00487 DEAD-like helicases superfamily IL_RS10235 SM00490 helicase superfamily c-terminal domain IL_RS10255 SM00382 ATPases associated with a variety of cellular activities IL_RS10285 SM00671 Sel1-like repeats. IL_RS10305 SM00387 Histidine kinase-like ATPases IL_RS10305 SM00388 His Kinase A (phosphoacceptor) domain IL_RS10305 SM00448 cheY-homologous receiver domain IL_RS10310 SM00421 helix_turn_helix, Lux Regulon IL_RS10310 SM00448 cheY-homologous receiver domain IL_RS10335 SM00098 Alkaline phosphatase homologues IL_RS10405 SM00382 ATPases associated with a variety of cellular activities IL_RS10420 SM00363 S4 RNA-binding domain IL_RS10430 SM00382 ATPases associated with a variety of cellular activities IL_RS10435 SM00564 beta-propeller repeat IL_RS10470 SM00562 IL_RS10470 IL_RS10535 SM01060 IL_RS10535 IL_RS10555 SM00530 Helix-turn-helix XRE-family like proteins IL_RS10565 SM00382 ATPases associated with a variety of cellular activities IL_RS10580 SM00382 ATPases associated with a variety of cellular activities IL_RS10580 SM00448 cheY-homologous receiver domain IL_RS10585 SM00387 Histidine kinase-like ATPases IL_RS10595 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) IL_RS10595 SM00091 PAS domain IL_RS10595 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). IL_RS10600 SM00267 diguanylate cyclase IL_RS10665 SM00382 ATPases associated with a variety of cellular activities IL_RS10670 SM00100 Cyclic nucleotide-monophosphate binding domain IL_RS10695 SM01234 IL_RS10695 IL_RS10710 SM00530 Helix-turn-helix XRE-family like proteins IL_RS10780 SM01011 Aminopeptidase P, N-terminal domain IL_RS10820 SM00382 ATPases associated with a variety of cellular activities IL_RS10840 SM00387 Histidine kinase-like ATPases IL_RS10840 SM00388 His Kinase A (phosphoacceptor) domain IL_RS10845 SM00448 cheY-homologous receiver domain IL_RS10845 SM00862 Transcriptional regulatory protein, C terminal IL_RS10860 SM00028 Tetratricopeptide repeats IL_RS10890 SM00387 Histidine kinase-like ATPases IL_RS10910 SM00226 Low molecular weight phosphatase family IL_RS10910 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor IL_RS10920 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain IL_RS10945 SM00487 DEAD-like helicases superfamily IL_RS10945 SM00490 helicase superfamily c-terminal domain IL_RS10955 SM00981 IL_RS10955 IL_RS10980 SM00861 Transketolase, pyrimidine binding domain IL_RS11010 SM00563 Phosphate acyltransferases IL_RS11035 SM01323 IL_RS11035 IL_RS11050 SM00091 PAS domain IL_RS11050 SM00387 Histidine kinase-like ATPases IL_RS11050 SM00388 His Kinase A (phosphoacceptor) domain IL_RS11050 SM00448 cheY-homologous receiver domain IL_RS11055 SM00421 helix_turn_helix, Lux Regulon IL_RS11055 SM00448 cheY-homologous receiver domain IL_RS11110 SM00938 Nitrogen regulatory protein P-II IL_RS11130 SM00052 Putative diguanylate phosphodiesterase IL_RS11135 SM00052 Putative diguanylate phosphodiesterase IL_RS11135 SM00267 diguanylate cyclase IL_RS11150 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). IL_RS11280 SM00387 Histidine kinase-like ATPases IL_RS11295 SM00400 zinc finger IL_RS11295 SM00493 IL_RS11295 IL_RS11295 SM00766 DNA primase DnaG DnaB-binding IL_RS11335 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). IL_RS11335 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain IL_RS11355 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain IL_RS11360 SM00861 Transketolase, pyrimidine binding domain IL_RS11385 SM00732 Likely ribonuclease with RNase H fold. IL_RS11400 SM00670 Large family of predicted nucleotide-binding domains IL_RS11405 SM00487 DEAD-like helicases superfamily IL_RS11405 SM00490 helicase superfamily c-terminal domain IL_RS11420 SM00271 DnaJ molecular chaperone homology domain IL_RS11450 SM00650 Ribosomal RNA adenine dimethylases IL_RS11465 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). IL_RS11465 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain IL_RS11470 SM00363 S4 RNA-binding domain IL_RS11525 SM00487 DEAD-like helicases superfamily IL_RS11525 SM00490 helicase superfamily c-terminal domain IL_RS11585 SM00382 ATPases associated with a variety of cellular activities IL_RS11610 SM00382 ATPases associated with a variety of cellular activities IL_RS11625 SM00052 Putative diguanylate phosphodiesterase IL_RS11625 SM00267 diguanylate cyclase IL_RS11625 SM00448 cheY-homologous receiver domain IL_RS11695 SM00841 Elongation factor P, C-terminal IL_RS11695 SM01185 IL_RS11695 IL_RS11720 SM00883 Chaperonin 10 Kd subunit IL_RS11745 SM00878 Biotin carboxylase C-terminal domain IL_RS11765 SM00798 AICARFT/IMPCHase bienzyme IL_RS11765 SM00851 MGS-like domain IL_RS11775 SM01209 IL_RS11775 IL_RS11775 SM01210 IL_RS11775 IL_RS11780 SM00052 Putative diguanylate phosphodiesterase IL_RS11780 SM00267 diguanylate cyclase IL_RS11825 SM00479 IL_RS11825 IL_RS11875 SM00320 WD40 repeats IL_RS11925 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. IL_RS11935 SM00052 Putative diguanylate phosphodiesterase IL_RS11935 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) IL_RS11935 SM00091 PAS domain IL_RS11935 SM00267 diguanylate cyclase IL_RS12010 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase IL_RS12020 SM00267 diguanylate cyclase IL_RS12035 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). IL_RS12035 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain IL_RS12040 SM00052 Putative diguanylate phosphodiesterase IL_RS12040 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. IL_RS12040 SM00091 PAS domain IL_RS12040 SM00267 diguanylate cyclase IL_RS12065 SM00116 Domain in cystathionine beta-synthase and other proteins. IL_RS12075 SM00450 Rhodanese Homology Domain IL_RS12125 SM00357 Cold shock protein domain IL_RS12125 SM00382 ATPases associated with a variety of cellular activities IL_RS12125 SM00959 Rho termination factor, N-terminal domain IL_RS12135 SM00487 DEAD-like helicases superfamily IL_RS12135 SM00490 helicase superfamily c-terminal domain IL_RS12145 SM01004 Delta-aminolevulinic acid dehydratase IL_RS12150 SM00267 diguanylate cyclase IL_RS12190 SM00487 DEAD-like helicases superfamily IL_RS12190 SM00490 helicase superfamily c-terminal domain IL_RS12220 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. IL_RS12220 SM00954 Region found in RelA / SpoT proteins IL_RS12225 SM01409 IL_RS12225 IL_RS12230 SM00072 Guanylate kinase homologues. IL_RS12340 SM00382 ATPases associated with a variety of cellular activities IL_RS12385 SM00091 PAS domain IL_RS12385 SM00267 diguanylate cyclase IL_RS12410 SM00530 Helix-turn-helix XRE-family like proteins IL_RS12415 SM00479 IL_RS12415 IL_RS12435 SM00463 Small MutS-related domain IL_RS12480 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain IL_RS12480 SM00387 Histidine kinase-like ATPases IL_RS12480 SM00388 His Kinase A (phosphoacceptor) domain IL_RS12485 SM00448 cheY-homologous receiver domain IL_RS12485 SM00862 Transcriptional regulatory protein, C terminal IL_RS12490 SM00382 ATPases associated with a variety of cellular activities IL_RS12490 SM00448 cheY-homologous receiver domain IL_RS12495 SM00387 Histidine kinase-like ATPases IL_RS12495 SM00388 His Kinase A (phosphoacceptor) domain IL_RS12500 SM01230 IL_RS12500 IL_RS12575 SM00345 helix_turn_helix gluconate operon transcriptional repressor IL_RS12575 SM00866 IL_RS12575 IL_RS12595 SM00052 Putative diguanylate phosphodiesterase IL_RS12595 SM00267 diguanylate cyclase IL_RS12600 SM00382 ATPases associated with a variety of cellular activities IL_RS12600 SM01086 C-terminal, D2-small domain, of ClpB protein IL_RS12615 SM00836 DALR anticodon binding domain IL_RS12615 SM01016 Arginyl tRNA synthetase N terminal dom IL_RS12620 SM00487 DEAD-like helicases superfamily IL_RS12620 SM00490 helicase superfamily c-terminal domain IL_RS12630 SM00919 Malic enzyme, NAD binding domain IL_RS12630 SM01274 IL_RS12630 IL_RS12720 SM00344 helix_turn_helix ASNC type IL_RS12735 SM00342 helix_turn_helix, arabinose operon control protein IL_RS12740 SM00342 helix_turn_helix, arabinose operon control protein IL_RS12750 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. IL_RS12750 SM00267 diguanylate cyclase IL_RS12780 SM00357 Cold shock protein domain IL_RS12785 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. IL_RS12785 SM00091 PAS domain IL_RS12785 SM00267 diguanylate cyclase IL_RS12810 SM00986 Uracil DNA glycosylase superfamily IL_RS12810 SM00987 UreE urease accessory protein, C-terminal domain IL_RS12910 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. IL_RS12920 SM00530 Helix-turn-helix XRE-family like proteins IL_RS12990 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. IL_RS12990 SM00267 diguanylate cyclase IL_RS13020 SM00382 ATPases associated with a variety of cellular activities IL_RS13040 SM00052 Putative diguanylate phosphodiesterase IL_RS13040 SM00267 diguanylate cyclase IL_RS13050 SM00341 Helicase and RNase D C-terminal IL_RS13050 SM00487 DEAD-like helicases superfamily IL_RS13050 SM00490 helicase superfamily c-terminal domain IL_RS13050 SM00956 IL_RS13050 IL_RS13120 SM00867 YceI-like domain IL_RS13165 SM00481 DNA polymerase alpha chain like domain IL_RS13180 SM00563 Phosphate acyltransferases IL_RS13245 SM00382 ATPases associated with a variety of cellular activities IL_RS13245 SM00448 cheY-homologous receiver domain IL_RS13250 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain IL_RS13250 SM00387 Histidine kinase-like ATPases IL_RS13250 SM00388 His Kinase A (phosphoacceptor) domain IL_RS13300 SM00420 helix_turn_helix, Deoxyribose operon repressor IL_RS13300 SM01134 IL_RS13300 IL_RS13375 SM00387 Histidine kinase-like ATPases IL_RS13395 SM00382 ATPases associated with a variety of cellular activities IL_RS13475 SM00470 ParB-like nuclease domain IL_RS13490 SM01228 IL_RS13490