locus-tag class description KVU_0001 PF00005 ABC transporter KVU_0002 PF01032 FecCD transport family KVU_0003 PF01032 FecCD transport family KVU_0005 PF01497 Periplasmic binding protein KVU_0006 PF07486 Cell Wall Hydrolase KVU_0006 PF01471 Putative peptidoglycan binding domain KVU_0011 PF00933 Glycosyl hydrolase family 3 N terminal domain KVU_0014 PF07733 Bacterial DNA polymerase III alpha NTPase domain KVU_0014 PF14579 Helix-hairpin-helix motif KVU_0014 PF02811 PHP domain KVU_0014 PF01336 OB-fold nucleic acid binding domain KVU_0014 PF17657 Bacterial DNA polymerase III alpha subunit finger domain KVU_0019 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KVU_0019 PF02894 Oxidoreductase family, C-terminal alpha/beta domain KVU_0021 PF00356 Bacterial regulatory proteins, lacI family KVU_0024 PF01926 50S ribosome-binding GTPase KVU_0024 PF06071 Protein of unknown function (DUF933) KVU_0025 PF07992 Pyridine nucleotide-disulphide oxidoreductase KVU_0027 PF13545 Crp-like helix-turn-helix domain KVU_0027 PF00027 Cyclic nucleotide-binding domain KVU_0028 PF04055 Radical SAM superfamily KVU_0030 PF02774 Semialdehyde dehydrogenase, dimerisation domain KVU_0030 PF01118 Semialdehyde dehydrogenase, NAD binding domain KVU_0032 PF00484 Carbonic anhydrase KVU_0034 PF00883 Cytosol aminopeptidase family, catalytic domain KVU_0034 PF02789 Cytosol aminopeptidase family, N-terminal domain KVU_0036 PF00877 NlpC/P60 family KVU_0039 PF03547 Membrane transport protein KVU_0040 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 KVU_0041 PF03969 AFG1-like ATPase KVU_0043 PF02875 Mur ligase family, glutamate ligase domain KVU_0043 PF08245 Mur ligase middle domain KVU_0044 PF01039 Carboxyl transferase domain KVU_0044 PF17848 Acetyl-coA carboxylase zinc finger domain KVU_0045 PF13091 PLD-like domain KVU_0045 PF13396 Phospholipase_D-nuclease N-terminal KVU_0046 PF00920 Dehydratase family KVU_0050 PF00994 Probable molybdopterin binding domain KVU_0050 PF02464 Competence-damaged protein KVU_0053 PF05736 OprF membrane domain KVU_0053 PF00691 OmpA family KVU_0054 PF14759 Reductase C-terminal KVU_0054 PF07992 Pyridine nucleotide-disulphide oxidoreductase KVU_0055 PF08534 Redoxin KVU_0056 PF01329 Pterin 4 alpha carbinolamine dehydratase KVU_0058 PF01042 Endoribonuclease L-PSP KVU_0061 PF00664 ABC transporter transmembrane region KVU_0061 PF00005 ABC transporter KVU_0063 PF00905 Penicillin binding protein transpeptidase domain KVU_0063 PF00912 Transglycosylase KVU_0065 PF00909 Ammonium Transporter Family KVU_0066 PF00155 Aminotransferase class I and II KVU_0067 PF01668 SmpB protein KVU_0069 PF03073 TspO/MBR family KVU_0070 PF01244 Membrane dipeptidase (Peptidase family M19) KVU_0071 PF00293 NUDIX domain KVU_0072 PF00701 Dihydrodipicolinate synthetase family KVU_0073 PF14718 Soluble lytic murein transglycosylase L domain KVU_0073 PF01464 Transglycosylase SLT domain KVU_0074 PF02082 Transcriptional regulator KVU_0075 PF00356 Bacterial regulatory proteins, lacI family KVU_0077 PF00528 Binding-protein-dependent transport system inner membrane component KVU_0078 PF00528 Binding-protein-dependent transport system inner membrane component KVU_0080 PF03459 TOBE domain KVU_0080 PF17912 MalK OB fold domain KVU_0080 PF00005 ABC transporter KVU_0081 PF00034 Cytochrome c KVU_0081 PF13442 Cytochrome C oxidase, cbb3-type, subunit III KVU_0083 PF02583 Metal-sensitive transcriptional repressor KVU_0085 PF01037 Lrp/AsnC ligand binding domain KVU_0088 PF04168 A predicted alpha-helical domain with a conserved ER motif. KVU_0088 PF14403 Circularly permuted ATP-grasp type 2 KVU_0089 PF00873 AcrB/AcrD/AcrF family KVU_0090 PF08379 Bacterial transglutaminase-like N-terminal region KVU_0090 PF01841 Transglutaminase-like superfamily KVU_0092 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KVU_0093 PF07690 Major Facilitator Superfamily KVU_0094 PF00248 Aldo/keto reductase family KVU_0095 PF07995 Glucose / Sorbosone dehydrogenase KVU_0096 PF09084 NMT1/THI5 like KVU_0097 PF00005 ABC transporter KVU_0098 PF02219 Methylenetetrahydrofolate reductase KVU_0100 PF01593 Flavin containing amine oxidoreductase KVU_0101 PF13593 SBF-like CPA transporter family (DUF4137) KVU_0102 PF00710 Asparaginase, N-terminal KVU_0102 PF17763 Glutaminase/Asparaginase C-terminal domain KVU_0103 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KVU_0104 PF12857 TOBE-like domain KVU_0104 PF00005 ABC transporter KVU_0104 PF17850 CysA C-terminal regulatory domain KVU_0105 PF00528 Binding-protein-dependent transport system inner membrane component KVU_0106 PF00528 Binding-protein-dependent transport system inner membrane component KVU_0108 PF13538 UvrD-like helicase C-terminal domain KVU_0108 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain KVU_0108 PF14490 Helix-hairpin-helix containing domain KVU_0109 PF01553 Acyltransferase KVU_0110 PF01220 Dehydroquinase class II KVU_0111 PF00005 ABC transporter KVU_0112 PF01061 ABC-2 type transporter KVU_0115 PF08459 UvrC Helix-hairpin-helix N-terminal KVU_0115 PF02151 UvrB/uvrC motif KVU_0115 PF12826 Helix-hairpin-helix motif KVU_0115 PF01541 GIY-YIG catalytic domain KVU_0116 PF01066 CDP-alcohol phosphatidyltransferase KVU_0118 PF02391 MoaE protein KVU_0120 PF00892 EamA-like transporter family KVU_0123 PF00288 GHMP kinases N terminal domain KVU_0123 PF08544 GHMP kinases C terminal KVU_0124 PF00348 Polyprenyl synthetase KVU_0127 PF03449 Transcription elongation factor, N-terminal KVU_0127 PF01272 Transcription elongation factor, GreA/GreB, C-term KVU_0133 PF03481 Putative GTP-binding controlling metal-binding KVU_0133 PF01300 Telomere recombination KVU_0134 PF00691 OmpA family KVU_0134 PF13488 Glycine zipper KVU_0135 PF01040 UbiA prenyltransferase family KVU_0136 PF04452 RNA methyltransferase KVU_0139 PF02660 Glycerol-3-phosphate acyltransferase KVU_0140 PF01979 Amidohydrolase family KVU_0141 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain KVU_0141 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain KVU_0146 PF00005 ABC transporter KVU_0149 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain KVU_0149 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain KVU_0151 PF00206 Lyase KVU_0151 PF14698 Argininosuccinate lyase C-terminal KVU_0152 PF08534 Redoxin KVU_0154 PF02565 Recombination protein O C terminal KVU_0154 PF11967 Recombination protein O N terminal KVU_0155 PF02622 Uncharacterized ACR, COG1678 KVU_0157 PF01926 50S ribosome-binding GTPase KVU_0157 PF07650 KH domain KVU_0158 PF00035 Double-stranded RNA binding motif KVU_0158 PF14622 Ribonuclease-III-like KVU_0159 PF10502 Signal peptidase, peptidase S26 KVU_0160 PF01648 4'-phosphopantetheinyl transferase superfamily KVU_0161 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ KVU_0163 PF02824 TGS domain KVU_0163 PF04607 Region found in RelA / SpoT proteins KVU_0163 PF13291 ACT domain KVU_0164 PF01192 RNA polymerase Rpb6 KVU_0166 PF02401 LytB protein KVU_0167 PF00075 RNase H KVU_0168 PF00551 Formyl transferase KVU_0169 PF02911 Formyl transferase, C-terminal domain KVU_0169 PF00551 Formyl transferase KVU_0171 PF01327 Polypeptide deformylase KVU_0172 PF01327 Polypeptide deformylase KVU_0173 PF00155 Aminotransferase class I and II KVU_0176 PF13409 Glutathione S-transferase, N-terminal domain KVU_0177 PF01979 Amidohydrolase family KVU_0178 PF02463 RecF/RecN/SMC N terminal domain KVU_0181 PF02590 Predicted SPOUT methyltransferase KVU_0184 PF00180 Isocitrate/isopropylmalate dehydrogenase KVU_0185 PF00892 EamA-like transporter family KVU_0188 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component KVU_0190 PF01168 Alanine racemase, N-terminal domain KVU_0190 PF14031 Putative serine dehydratase domain KVU_0191 PF00392 Bacterial regulatory proteins, gntR family KVU_0191 PF07729 FCD domain KVU_0192 PF00376 MerR family regulatory protein KVU_0192 PF09278 MerR, DNA binding KVU_0193 PF00248 Aldo/keto reductase family KVU_0196 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family KVU_0197 PF00248 Aldo/keto reductase family KVU_0198 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KVU_0198 PF01872 RibD C-terminal domain KVU_0199 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase KVU_0199 PF00925 GTP cyclohydrolase II KVU_0200 PF00885 6,7-dimethyl-8-ribityllumazine synthase KVU_0203 PF13360 PQQ-like domain KVU_0203 PF13442 Cytochrome C oxidase, cbb3-type, subunit III KVU_0204 PF00248 Aldo/keto reductase family KVU_0205 PF01594 AI-2E family transporter KVU_0209 PF00356 Bacterial regulatory proteins, lacI family KVU_0210 PF00528 Binding-protein-dependent transport system inner membrane component KVU_0211 PF08402 TOBE domain KVU_0211 PF00005 ABC transporter KVU_0212 PF13416 Bacterial extracellular solute-binding protein KVU_0213 PF00528 Binding-protein-dependent transport system inner membrane component KVU_0214 PF14310 Fibronectin type III-like domain KVU_0214 PF00933 Glycosyl hydrolase family 3 N terminal domain KVU_0214 PF01915 Glycosyl hydrolase family 3 C-terminal domain KVU_0214 PF07691 PA14 domain KVU_0217 PF01297 Zinc-uptake complex component A periplasmic KVU_0218 PF01425 Amidase KVU_0219 PF01266 FAD dependent oxidoreductase KVU_0220 PF01042 Endoribonuclease L-PSP KVU_0221 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KVU_0221 PF00005 ABC transporter KVU_0222 PF12911 N-terminal TM domain of oligopeptide transport permease C KVU_0222 PF00528 Binding-protein-dependent transport system inner membrane component KVU_0223 PF00528 Binding-protein-dependent transport system inner membrane component KVU_0224 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KVU_0225 PF00392 Bacterial regulatory proteins, gntR family KVU_0225 PF07729 FCD domain KVU_0226 PF13360 PQQ-like domain KVU_0229 PF00034 Cytochrome c KVU_0229 PF02790 Cytochrome C oxidase subunit II, transmembrane domain KVU_0229 PF00116 Cytochrome C oxidase subunit II, periplasmic domain KVU_0230 PF00115 Cytochrome C and Quinol oxidase polypeptide I KVU_0234 PF00561 alpha/beta hydrolase fold KVU_0238 PF03979 Sigma-70 factor, region 1.1 KVU_0238 PF04545 Sigma-70, region 4 KVU_0238 PF04542 Sigma-70 region 2 KVU_0238 PF04539 Sigma-70 region 3 KVU_0238 PF00140 Sigma-70 factor, region 1.2 KVU_0239 PF01119 DNA mismatch repair protein, C-terminal domain KVU_0239 PF08676 MutL C terminal dimerisation domain KVU_0243 PF00145 C-5 cytosine-specific DNA methylase KVU_0252 PF03852 DNA mismatch endonuclease Vsr KVU_0254 PF00145 C-5 cytosine-specific DNA methylase KVU_0258 PF07690 Major Facilitator Superfamily KVU_0259 PF00005 ABC transporter KVU_0260 PF02646 RmuC family KVU_0261 PF01032 FecCD transport family KVU_0265 PF00575 S1 RNA binding domain KVU_0266 PF00216 Bacterial DNA-binding protein KVU_0268 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase KVU_0270 PF00291 Pyridoxal-phosphate dependent enzyme KVU_0271 PF01195 Peptidyl-tRNA hydrolase KVU_0272 PF14693 Ribosomal protein TL5, C-terminal domain KVU_0272 PF01386 Ribosomal L25p family KVU_0273 PF01070 FMN-dependent dehydrogenase KVU_0274 PF00290 Tryptophan synthase alpha chain KVU_0275 PF03702 Anhydro-N-acetylmuramic acid kinase KVU_0277 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KVU_0277 PF00005 ABC transporter KVU_0278 PF00528 Binding-protein-dependent transport system inner membrane component KVU_0278 PF12911 N-terminal TM domain of oligopeptide transport permease C KVU_0279 PF00528 Binding-protein-dependent transport system inner membrane component KVU_0280 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KVU_0281 PF09330 D-lactate dehydrogenase, membrane binding KVU_0281 PF01565 FAD binding domain KVU_0283 PF04055 Radical SAM superfamily KVU_0283 PF00919 Uncharacterized protein family UPF0004 KVU_0283 PF01938 TRAM domain KVU_0284 PF02562 PhoH-like protein KVU_0285 PF02130 Uncharacterized protein family UPF0054 KVU_0286 PF03471 Transporter associated domain KVU_0286 PF00571 CBS domain KVU_0287 PF00795 Carbon-nitrogen hydrolase KVU_0288 PF02772 S-adenosylmethionine synthetase, central domain KVU_0288 PF02773 S-adenosylmethionine synthetase, C-terminal domain KVU_0288 PF00438 S-adenosylmethionine synthetase, N-terminal domain KVU_0290 PF01266 FAD dependent oxidoreductase KVU_0291 PF00120 Glutamine synthetase, catalytic domain KVU_0292 PF00117 Glutamine amidotransferase class-I KVU_0292 PF02540 NAD synthase KVU_0292 PF00958 GMP synthase C terminal domain KVU_0293 PF00120 Glutamine synthetase, catalytic domain KVU_0294 PF00528 Binding-protein-dependent transport system inner membrane component KVU_0295 PF00528 Binding-protein-dependent transport system inner membrane component KVU_0296 PF00497 Bacterial extracellular solute-binding proteins, family 3 KVU_0297 PF00005 ABC transporter KVU_0298 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ KVU_0299 PF06418 CTP synthase N-terminus KVU_0299 PF00117 Glutamine amidotransferase class-I KVU_0302 PF00709 Adenylosuccinate synthetase KVU_0303 PF02844 Phosphoribosylglycinamide synthetase, N domain KVU_0303 PF02843 Phosphoribosylglycinamide synthetase, C domain KVU_0303 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KVU_0305 PF02601 Exonuclease VII, large subunit KVU_0305 PF13742 OB-fold nucleic acid binding domain KVU_0306 PF01523 Putative modulator of DNA gyrase KVU_0307 PF02790 Cytochrome C oxidase subunit II, transmembrane domain KVU_0307 PF00116 Cytochrome C oxidase subunit II, periplasmic domain KVU_0308 PF01040 UbiA prenyltransferase family KVU_0310 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 KVU_0311 PF00510 Cytochrome c oxidase subunit III KVU_0313 PF00291 Pyridoxal-phosphate dependent enzyme KVU_0313 PF14821 Threonine synthase N terminus KVU_0314 PF00675 Insulinase (Peptidase family M16) KVU_0314 PF05193 Peptidase M16 inactive domain KVU_0315 PF13302 Acetyltransferase (GNAT) domain KVU_0316 PF00156 Phosphoribosyl transferase domain KVU_0317 PF02913 FAD linked oxidases, C-terminal domain KVU_0317 PF01565 FAD binding domain KVU_0318 PF01048 Phosphorylase superfamily KVU_0319 PF00072 Response regulator receiver domain KVU_0319 PF00196 Bacterial regulatory proteins, luxR family KVU_0320 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KVU_0321 PF00528 Binding-protein-dependent transport system inner membrane component KVU_0322 PF00528 Binding-protein-dependent transport system inner membrane component KVU_0322 PF12911 N-terminal TM domain of oligopeptide transport permease C KVU_0323 PF00005 ABC transporter KVU_0323 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KVU_0324 PF00005 ABC transporter KVU_0324 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KVU_0326 PF00313 'Cold-shock' DNA-binding domain KVU_0328 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KVU_0328 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KVU_0328 PF02824 TGS domain KVU_0328 PF03129 Anticodon binding domain KVU_0330 PF01625 Peptide methionine sulfoxide reductase KVU_0332 PF01098 Cell cycle protein KVU_0333 PF00905 Penicillin binding protein transpeptidase domain KVU_0333 PF03717 Penicillin-binding Protein dimerisation domain KVU_0335 PF04085 rod shape-determining protein MreC KVU_0339 PF13580 SIS domain KVU_0341 PF00288 GHMP kinases N terminal domain KVU_0341 PF08544 GHMP kinases C terminal KVU_0342 PF00535 Glycosyl transferase family 2 KVU_0342 PF00534 Glycosyl transferases group 1 KVU_0345 PF00849 RNA pseudouridylate synthase KVU_0346 PF04542 Sigma-70 region 2 KVU_0346 PF00140 Sigma-70 factor, region 1.2 KVU_0346 PF04545 Sigma-70, region 4 KVU_0347 PF09857 Putative toxin of bacterial toxin-antitoxin pair KVU_0348 PF00485 Phosphoribulokinase / Uridine kinase family KVU_0353 PF01479 S4 domain KVU_0354 PF11953 Domain of unknown function (DUF3470) KVU_0354 PF00037 4Fe-4S binding domain KVU_0355 PF02559 CarD-like/TRCF domain KVU_0356 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) KVU_0357 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KVU_0357 PF07992 Pyridine nucleotide-disulphide oxidoreductase KVU_0358 PF12221 Bacterial membrane protein N terminal KVU_0358 PF01145 SPFH domain / Band 7 family KVU_0359 PF01145 SPFH domain / Band 7 family KVU_0360 PF17820 PDZ domain KVU_0360 PF13180 PDZ domain KVU_0361 PF00111 2Fe-2S iron-sulfur cluster binding domain KVU_0362 PF04402 Protein of unknown function (DUF541) KVU_0365 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain KVU_0365 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KVU_0366 PF10396 GTP-binding protein TrmE N-terminus KVU_0366 PF01926 50S ribosome-binding GTPase KVU_0366 PF12631 MnmE helical domain KVU_0369 PF03807 NADP oxidoreductase coenzyme F420-dependent KVU_0369 PF14748 Pyrroline-5-carboxylate reductase dimerisation KVU_0370 PF01588 Putative tRNA binding domain KVU_0371 PF00265 Thymidine kinase KVU_0372 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KVU_0372 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KVU_0373 PF13442 Cytochrome C oxidase, cbb3-type, subunit III KVU_0373 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP KVU_0374 PF00005 ABC transporter KVU_0375 PF12704 MacB-like periplasmic core domain KVU_0375 PF02687 FtsX-like permease family KVU_0376 PF03129 Anticodon binding domain KVU_0376 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KVU_0377 PF13089 Polyphosphate kinase N-terminal domain KVU_0377 PF02503 Polyphosphate kinase middle domain KVU_0377 PF13090 Polyphosphate kinase C-terminal domain 2 KVU_0377 PF17941 Polyphosphate kinase C-terminal domain 1 KVU_0378 PF02541 Ppx/GppA phosphatase family KVU_0381 PF00579 tRNA synthetases class I (W and Y) KVU_0384 PF01925 Sulfite exporter TauE/SafE KVU_0385 PF01048 Phosphorylase superfamily KVU_0386 PF02653 Branched-chain amino acid transport system / permease component KVU_0387 PF02653 Branched-chain amino acid transport system / permease component KVU_0388 PF00005 ABC transporter KVU_0389 PF02608 ABC transporter substrate-binding protein PnrA-like KVU_0391 PF00814 Glycoprotease family KVU_0392 PF01106 NifU-like domain KVU_0395 PF00749 tRNA synthetases class I (E and Q), catalytic domain KVU_0396 PF00313 'Cold-shock' DNA-binding domain KVU_0397 PF00005 ABC transporter KVU_0397 PF12848 ABC transporter KVU_0398 PF01467 Cytidylyltransferase-like KVU_0400 PF01921 tRNA synthetases class I (K) KVU_0401 PF12708 Pectate lyase superfamily protein KVU_0401 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) KVU_0401 PF13229 Right handed beta helix region KVU_0402 PF01774 UreD urease accessory protein KVU_0403 PF00547 Urease, gamma subunit KVU_0404 PF00699 Urease beta subunit KVU_0405 PF00449 Urease alpha-subunit, N-terminal domain KVU_0405 PF01979 Amidohydrolase family KVU_0406 PF05194 UreE urease accessory protein, C-terminal domain KVU_0406 PF02814 UreE urease accessory protein, N-terminal domain KVU_0407 PF01730 UreF KVU_0408 PF02492 CobW/HypB/UreG, nucleotide-binding domain KVU_0410 PF03466 LysR substrate binding domain KVU_0410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KVU_0411 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KVU_0412 PF13409 Glutathione S-transferase, N-terminal domain KVU_0413 PF00202 Aminotransferase class-III KVU_0416 PF01380 SIS domain KVU_0417 PF02132 RecR protein KVU_0417 PF13662 Toprim domain KVU_0418 PF02575 YbaB/EbfC DNA-binding family KVU_0419 PF12169 DNA polymerase III subunits gamma and tau domain III KVU_0419 PF12170 DNA polymerase III tau subunit V interacting with alpha KVU_0419 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding KVU_0420 PF00583 Acetyltransferase (GNAT) family KVU_0422 PF13419 Haloacid dehalogenase-like hydrolase KVU_0426 PF01817 Chorismate mutase type II KVU_0426 PF00800 Prephenate dehydratase KVU_0426 PF01842 ACT domain KVU_0427 PF00034 Cytochrome c KVU_0428 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KVU_0429 PF00528 Binding-protein-dependent transport system inner membrane component KVU_0430 PF00528 Binding-protein-dependent transport system inner membrane component KVU_0430 PF12911 N-terminal TM domain of oligopeptide transport permease C KVU_0431 PF00005 ABC transporter KVU_0431 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KVU_0432 PF07943 Penicillin-binding protein 5, C-terminal domain KVU_0432 PF00768 D-alanyl-D-alanine carboxypeptidase KVU_0434 PF02617 ATP-dependent Clp protease adaptor protein ClpS KVU_0435 PF08468 Methyltransferase small domain N-terminal KVU_0435 PF05175 Methyltransferase small domain KVU_0437 PF01218 Coproporphyrinogen III oxidase KVU_0440 PF03900 Porphobilinogen deaminase, C-terminal domain KVU_0440 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain KVU_0441 PF00155 Aminotransferase class I and II KVU_0442 PF02153 Prephenate dehydrogenase KVU_0446 PF03350 Uncharacterized protein family, UPF0114 KVU_0447 PF00163 Ribosomal protein S4/S9 N-terminal domain KVU_0447 PF01479 S4 domain KVU_0448 PF08241 Methyltransferase domain KVU_0449 PF17871 AAA lid domain KVU_0449 PF02861 Clp amino terminal domain, pathogenicity island component KVU_0449 PF00004 ATPase family associated with various cellular activities (AAA) KVU_0449 PF07724 AAA domain (Cdc48 subfamily) KVU_0449 PF10431 C-terminal, D2-small domain, of ClpB protein KVU_0450 PF00753 Metallo-beta-lactamase superfamily KVU_0450 PF16123 Hydroxyacylglutathione hydrolase C-terminus KVU_0451 PF08241 Methyltransferase domain KVU_0452 PF00213 ATP synthase delta (OSCP) subunit KVU_0453 PF00306 ATP synthase alpha/beta chain, C terminal domain KVU_0453 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KVU_0453 PF02874 ATP synthase alpha/beta family, beta-barrel domain KVU_0454 PF00231 ATP synthase KVU_0455 PF02874 ATP synthase alpha/beta family, beta-barrel domain KVU_0455 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KVU_0456 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain KVU_0457 PF09458 H-type lectin domain KVU_0459 PF03692 Putative zinc- or iron-chelating domain KVU_0460 PF06574 FAD synthetase KVU_0460 PF01687 Riboflavin kinase KVU_0462 PF01368 DHH family KVU_0462 PF02833 DHHA2 domain KVU_0465 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KVU_0466 PF06965 Na+/H+ antiporter 1 KVU_0469 PF00011 Hsp20/alpha crystallin family KVU_0472 PF07992 Pyridine nucleotide-disulphide oxidoreductase KVU_0473 PF01037 Lrp/AsnC ligand binding domain KVU_0474 PF02578 Multi-copper polyphenol oxidoreductase laccase KVU_0476 PF01790 Prolipoprotein diacylglyceryl transferase KVU_0478 PF01475 Ferric uptake regulator family KVU_0479 PF00005 ABC transporter KVU_0480 PF00950 ABC 3 transport family KVU_0481 PF01297 Zinc-uptake complex component A periplasmic KVU_0482 PF00005 ABC transporter KVU_0483 PF00535 Glycosyl transferase family 2 KVU_0484 PF01497 Periplasmic binding protein KVU_0486 PF00210 Ferritin-like domain KVU_0487 PF02653 Branched-chain amino acid transport system / permease component KVU_0488 PF00005 ABC transporter KVU_0489 PF13407 Periplasmic binding protein domain KVU_0490 PF00370 FGGY family of carbohydrate kinases, N-terminal domain KVU_0490 PF02782 FGGY family of carbohydrate kinases, C-terminal domain KVU_0491 PF04115 Ureidoglycolate lyase KVU_0492 PF05899 Protein of unknown function (DUF861) KVU_0492 PF07883 Cupin domain KVU_0493 PF09349 OHCU decarboxylase KVU_0493 PF01014 Uricase KVU_0494 PF00202 Aminotransferase class-III KVU_0495 PF00576 HIUase/Transthyretin family KVU_0496 PF00403 Heavy-metal-associated domain KVU_0497 PF00361 Proton-conducting membrane transporter KVU_0497 PF13244 Domain of unknown function (DUF4040) KVU_0497 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus KVU_0497 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter KVU_0498 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L KVU_0499 PF01899 Na+/H+ ion antiporter subunit KVU_0500 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) KVU_0501 PF03334 Na+/H+ antiporter subunit KVU_0505 PF02896 PEP-utilising enzyme, TIM barrel domain KVU_0505 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain KVU_0505 PF00391 PEP-utilising enzyme, mobile domain KVU_0506 PF01471 Putative peptidoglycan binding domain KVU_0506 PF07486 Cell Wall Hydrolase KVU_0507 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KVU_0507 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KVU_0507 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KVU_0507 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KVU_0509 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain KVU_0509 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain KVU_0511 PF01494 FAD binding domain KVU_0514 PF00392 Bacterial regulatory proteins, gntR family KVU_0514 PF07729 FCD domain KVU_0516 PF00117 Glutamine amidotransferase class-I KVU_0516 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain KVU_0518 PF00296 Luciferase-like monooxygenase KVU_0519 PF08362 YcdC-like protein, C-terminal region KVU_0519 PF00440 Bacterial regulatory proteins, tetR family KVU_0520 PF07687 Peptidase dimerisation domain KVU_0520 PF01546 Peptidase family M20/M25/M40 KVU_0522 PF01979 Amidohydrolase family KVU_0523 PF00005 ABC transporter KVU_0524 PF00528 Binding-protein-dependent transport system inner membrane component KVU_0525 PF00528 Binding-protein-dependent transport system inner membrane component KVU_0527 PF02390 Putative methyltransferase KVU_0529 PF02224 Cytidylate kinase KVU_0530 PF00403 Heavy-metal-associated domain KVU_0531 PF13411 MerR HTH family regulatory protein KVU_0532 PF00005 ABC transporter KVU_0534 PF02632 BioY family KVU_0537 PF09334 tRNA synthetases class I (M) KVU_0539 PF00248 Aldo/keto reductase family KVU_0542 PF04542 Sigma-70 region 2 KVU_0542 PF08281 Sigma-70, region 4 KVU_0545 PF00990 Diguanylate cyclase, GGDEF domain KVU_0545 PF00072 Response regulator receiver domain KVU_0547 PF02881 SRP54-type protein, helical bundle domain KVU_0547 PF00448 SRP54-type protein, GTPase domain KVU_0548 PF04279 Intracellular septation protein A KVU_0549 PF01053 Cys/Met metabolism PLP-dependent enzyme KVU_0551 PF00356 Bacterial regulatory proteins, lacI family KVU_0552 PF05977 Transmembrane secretion effector KVU_0554 PF08402 TOBE domain KVU_0554 PF00005 ABC transporter KVU_0557 PF01547 Bacterial extracellular solute-binding protein KVU_0558 PF01042 Endoribonuclease L-PSP KVU_0559 PF01979 Amidohydrolase family KVU_0560 PF00005 ABC transporter KVU_0560 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KVU_0561 PF03932 CutC family KVU_0562 PF00005 ABC transporter KVU_0562 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KVU_0563 PF00528 Binding-protein-dependent transport system inner membrane component KVU_0563 PF12911 N-terminal TM domain of oligopeptide transport permease C KVU_0564 PF00528 Binding-protein-dependent transport system inner membrane component KVU_0566 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KVU_0569 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region KVU_0569 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KVU_0570 PF01979 Amidohydrolase family KVU_0571 PF01156 Inosine-uridine preferring nucleoside hydrolase KVU_0572 PF02608 ABC transporter substrate-binding protein PnrA-like KVU_0573 PF00005 ABC transporter KVU_0574 PF02653 Branched-chain amino acid transport system / permease component KVU_0575 PF02653 Branched-chain amino acid transport system / permease component KVU_0578 PF00490 Delta-aminolevulinic acid dehydratase KVU_0580 PF17757 UvrB interaction domain KVU_0580 PF03461 TRCF domain KVU_0580 PF00271 Helicase conserved C-terminal domain KVU_0580 PF02559 CarD-like/TRCF domain KVU_0580 PF00270 DEAD/DEAH box helicase KVU_0581 PF01406 tRNA synthetases class I (C) catalytic domain KVU_0581 PF09190 DALR domain KVU_0584 PF03734 L,D-transpeptidase catalytic domain KVU_0584 PF01471 Putative peptidoglycan binding domain KVU_0585 PF00132 Bacterial transferase hexapeptide (six repeats) KVU_0585 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD KVU_0587 PF05872 Bacterial protein of unknown function (DUF853) KVU_0588 PF02899 Phage integrase, N-terminal SAM-like domain KVU_0588 PF00589 Phage integrase family KVU_0592 PF00436 Single-strand binding protein family KVU_0594 PF01464 Transglycosylase SLT domain KVU_0597 PF00696 Amino acid kinase family KVU_0598 PF01259 SAICAR synthetase KVU_0599 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase KVU_0601 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KVU_0601 PF02743 Cache domain KVU_0601 PF00512 His Kinase A (phospho-acceptor) domain KVU_0602 PF00072 Response regulator receiver domain KVU_0602 PF00158 Sigma-54 interaction domain KVU_0602 PF02954 Bacterial regulatory protein, Fis family KVU_0603 PF00575 S1 RNA binding domain KVU_0603 PF10150 Ribonuclease E/G family KVU_0603 PF12111 Polyribonucleotide phosphorylase C terminal KVU_0604 PF01726 LexA DNA binding domain KVU_0604 PF00717 Peptidase S24-like KVU_0605 PF00994 Probable molybdopterin binding domain KVU_0605 PF03453 MoeA N-terminal region (domain I and II) KVU_0605 PF03454 MoeA C-terminal region (domain IV) KVU_0606 PF01967 MoaC family KVU_0607 PF00218 Indole-3-glycerol phosphate synthase KVU_0608 PF03167 Uracil DNA glycosylase superfamily KVU_0609 PF00591 Glycosyl transferase family, a/b domain KVU_0609 PF02885 Glycosyl transferase family, helical bundle domain KVU_0612 PF04715 Anthranilate synthase component I, N terminal region KVU_0612 PF00425 chorismate binding enzyme KVU_0615 PF00155 Aminotransferase class I and II KVU_0616 PF00156 Phosphoribosyl transferase domain KVU_0618 PF01243 Pyridoxamine 5'-phosphate oxidase KVU_0618 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region KVU_0619 PF00313 'Cold-shock' DNA-binding domain KVU_0621 PF16363 GDP-mannose 4,6 dehydratase KVU_0622 PF01370 NAD dependent epimerase/dehydratase family KVU_0623 PF00816 H-NS histone family KVU_0625 PF04851 Type III restriction enzyme, res subunit KVU_0625 PF17757 UvrB interaction domain KVU_0625 PF00271 Helicase conserved C-terminal domain KVU_0625 PF02151 UvrB/uvrC motif KVU_0625 PF12344 Ultra-violet resistance protein B KVU_0631 PF00005 ABC transporter KVU_0632 PF13360 PQQ-like domain KVU_0632 PF13442 Cytochrome C oxidase, cbb3-type, subunit III KVU_0637 PF05698 Bacterial trigger factor protein (TF) C-terminus KVU_0637 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KVU_0637 PF05697 Bacterial trigger factor protein (TF) KVU_0638 PF02872 5'-nucleotidase, C-terminal domain KVU_0638 PF00149 Calcineurin-like phosphoesterase KVU_0639 PF01281 Ribosomal protein L9, N-terminal domain KVU_0639 PF03948 Ribosomal protein L9, C-terminal domain KVU_0640 PF01084 Ribosomal protein S18 KVU_0641 PF01250 Ribosomal protein S6 KVU_0642 PF00893 Small Multidrug Resistance protein KVU_0643 PF00698 Acyl transferase domain KVU_0645 PF00550 Phosphopantetheine attachment site KVU_0647 PF02801 Beta-ketoacyl synthase, C-terminal domain KVU_0647 PF00109 Beta-ketoacyl synthase, N-terminal domain KVU_0648 PF02618 YceG-like family KVU_0650 PF04860 Phage portal protein KVU_0666 PF00132 Bacterial transferase hexapeptide (six repeats) KVU_0666 PF06426 Serine acetyltransferase, N-terminal KVU_0667 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KVU_0667 PF02817 e3 binding domain KVU_0667 PF00364 Biotin-requiring enzyme KVU_0668 PF00364 Biotin-requiring enzyme KVU_0668 PF02779 Transketolase, pyrimidine binding domain KVU_0668 PF02780 Transketolase, C-terminal domain KVU_0669 PF00676 Dehydrogenase E1 component KVU_0671 PF01791 DeoC/LacD family aldolase KVU_0672 PF00162 Phosphoglycerate kinase KVU_0673 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD KVU_0674 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD KVU_0675 PF02696 Uncharacterized ACR, YdiU/UPF0061 family KVU_0676 PF01156 Inosine-uridine preferring nucleoside hydrolase KVU_0677 PF10369 Small subunit of acetolactate synthase KVU_0677 PF01842 ACT domain KVU_0678 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KVU_0678 PF00205 Thiamine pyrophosphate enzyme, central domain KVU_0678 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KVU_0679 PF03480 Bacterial extracellular solute-binding protein, family 7 KVU_0680 PF03480 Bacterial extracellular solute-binding protein, family 7 KVU_0681 PF03480 Bacterial extracellular solute-binding protein, family 7 KVU_0682 PF04377 Arginine-tRNA-protein transferase, C terminus KVU_0682 PF04376 Arginine-tRNA-protein transferase, N terminus KVU_0683 PF01554 MatE KVU_0684 PF09335 SNARE associated Golgi protein KVU_0685 PF00155 Aminotransferase class I and II KVU_0688 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KVU_0691 PF01975 Survival protein SurE KVU_0692 PF00156 Phosphoribosyl transferase domain KVU_0692 PF13537 Glutamine amidotransferase domain KVU_0694 PF06745 KaiC KVU_0694 PF18073 Rubredoxin metal binding domain KVU_0695 PF01546 Peptidase family M20/M25/M40 KVU_0695 PF07687 Peptidase dimerisation domain KVU_0696 PF00155 Aminotransferase class I and II KVU_0697 PF13464 Domain of unknown function (DUF4115) KVU_0698 PF04551 GcpE protein KVU_0700 PF00155 Aminotransferase class I and II KVU_0701 PF01520 N-acetylmuramoyl-L-alanine amidase KVU_0702 PF00905 Penicillin binding protein transpeptidase domain KVU_0702 PF17092 Penicillin-binding protein OB-like domain KVU_0702 PF00912 Transglycosylase KVU_0703 PF00472 RF-1 domain KVU_0703 PF03462 PCRF domain KVU_0717 PF10073 Uncharacterized protein conserved in bacteria (DUF2312) KVU_0722 PF05532 CsbD-like KVU_0741 PF01594 AI-2E family transporter KVU_0755 PF08281 Sigma-70, region 4 KVU_0755 PF04542 Sigma-70 region 2 KVU_0758 PF00106 short chain dehydrogenase KVU_0760 PF13676 TIR domain KVU_0765 PF01032 FecCD transport family KVU_0766 PF01032 FecCD transport family KVU_0767 PF01497 Periplasmic binding protein KVU_0770 PF00005 ABC transporter KVU_0771 PF07715 TonB-dependent Receptor Plug Domain KVU_0772 PF00296 Luciferase-like monooxygenase KVU_0773 PF08281 Sigma-70, region 4 KVU_0773 PF04542 Sigma-70 region 2 KVU_0777 PF00132 Bacterial transferase hexapeptide (six repeats) KVU_0783 PF00570 HRDC domain KVU_0783 PF01612 3'-5' exonuclease KVU_0785 PF02657 Fe-S metabolism associated domain KVU_0786 PF07729 FCD domain KVU_0786 PF00392 Bacterial regulatory proteins, gntR family KVU_0789 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KVU_0790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KVU_0790 PF00072 Response regulator receiver domain KVU_0790 PF13188 PAS domain KVU_0790 PF08448 PAS fold KVU_0790 PF00512 His Kinase A (phospho-acceptor) domain KVU_0793 PF01029 NusB family KVU_0793 PF01189 16S rRNA methyltransferase RsmB/F KVU_0794 PF00571 CBS domain KVU_0794 PF00478 IMP dehydrogenase / GMP reductase domain KVU_0796 PF02464 Competence-damaged protein KVU_0798 PF02542 YgbB family KVU_0798 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase KVU_0800 PF01207 Dihydrouridine synthase (Dus) KVU_0801 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KVU_0801 PF00512 His Kinase A (phospho-acceptor) domain KVU_0802 PF02954 Bacterial regulatory protein, Fis family KVU_0802 PF00072 Response regulator receiver domain KVU_0802 PF14532 Sigma-54 interaction domain KVU_0803 PF00989 PAS fold KVU_0803 PF00672 HAMP domain KVU_0803 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KVU_0803 PF00512 His Kinase A (phospho-acceptor) domain KVU_0804 PF00158 Sigma-54 interaction domain KVU_0804 PF00072 Response regulator receiver domain KVU_0804 PF02954 Bacterial regulatory protein, Fis family KVU_0806 PF03466 LysR substrate binding domain KVU_0806 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KVU_0807 PF03328 HpcH/HpaI aldolase/citrate lyase family KVU_0808 PF00465 Iron-containing alcohol dehydrogenase KVU_0809 PF00083 Sugar (and other) transporter KVU_0809 PF07690 Major Facilitator Superfamily KVU_0810 PF00171 Aldehyde dehydrogenase family KVU_0811 PF02321 Outer membrane efflux protein KVU_0812 PF00873 AcrB/AcrD/AcrF family KVU_0813 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KVU_0814 PF00072 Response regulator receiver domain KVU_0814 PF00486 Transcriptional regulatory protein, C terminal KVU_0816 PF00672 HAMP domain KVU_0816 PF00512 His Kinase A (phospho-acceptor) domain KVU_0816 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KVU_0818 PF07715 TonB-dependent Receptor Plug Domain KVU_0818 PF00593 TonB dependent receptor KVU_0820 PF00005 ABC transporter KVU_0820 PF06472 ABC transporter transmembrane region 2 KVU_0821 PF08021 Siderophore-interacting FAD-binding domain KVU_0821 PF04954 Siderophore-interacting protein KVU_0822 PF01979 Amidohydrolase family KVU_0822 PF13382 Adenine deaminase C-terminal domain KVU_0823 PF14031 Putative serine dehydratase domain KVU_0823 PF01168 Alanine racemase, N-terminal domain KVU_0825 PF00795 Carbon-nitrogen hydrolase KVU_0826 PF08402 TOBE domain KVU_0826 PF00005 ABC transporter KVU_0827 PF00528 Binding-protein-dependent transport system inner membrane component KVU_0828 PF00528 Binding-protein-dependent transport system inner membrane component KVU_0830 PF02630 SCO1/SenC KVU_0832 PF02417 Chromate transporter KVU_0834 PF02522 Aminoglycoside 3-N-acetyltransferase KVU_0842 PF01804 Penicillin amidase KVU_0843 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KVU_0843 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase KVU_0845 PF02653 Branched-chain amino acid transport system / permease component KVU_0846 PF00005 ABC transporter KVU_0847 PF00005 ABC transporter KVU_0847 PF12399 Branched-chain amino acid ATP-binding cassette transporter KVU_0848 PF13458 Periplasmic binding protein KVU_0849 PF01474 Class-II DAHP synthetase family KVU_0851 PF00625 Guanylate kinase KVU_0852 PF00989 PAS fold KVU_0852 PF00512 His Kinase A (phospho-acceptor) domain KVU_0852 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KVU_0852 PF11808 Phosphate regulon sensor protein PhoR KVU_0853 PF02777 Iron/manganese superoxide dismutases, C-terminal domain KVU_0853 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain KVU_0854 PF00892 EamA-like transporter family KVU_0857 PF00664 ABC transporter transmembrane region KVU_0857 PF00005 ABC transporter KVU_0860 PF01926 50S ribosome-binding GTPase KVU_0860 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal KVU_0861 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KVU_0861 PF02403 Seryl-tRNA synthetase N-terminal domain KVU_0863 PF02699 Preprotein translocase subunit KVU_0864 PF00005 ABC transporter KVU_0865 PF03379 CcmB protein KVU_0866 PF01578 Cytochrome C assembly protein KVU_0868 PF08534 Redoxin KVU_0869 PF00330 Aconitase family (aconitate hydratase) KVU_0869 PF00694 Aconitase C-terminal domain KVU_0872 PF13411 MerR HTH family regulatory protein KVU_0873 PF00216 Bacterial DNA-binding protein KVU_0874 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal KVU_0874 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KVU_0875 PF02504 Fatty acid synthesis protein KVU_0876 PF01783 Ribosomal L32p protein family KVU_0879 PF01641 SelR domain KVU_0881 PF16326 ABC transporter C-terminal domain KVU_0881 PF00005 ABC transporter KVU_0883 PF03819 MazG nucleotide pyrophosphohydrolase domain KVU_0884 PF07687 Peptidase dimerisation domain KVU_0884 PF01546 Peptidase family M20/M25/M40 KVU_0885 PF00491 Arginase family KVU_0886 PF01168 Alanine racemase, N-terminal domain KVU_0886 PF00842 Alanine racemase, C-terminal domain KVU_0887 PF00772 DnaB-like helicase N terminal domain KVU_0887 PF03796 DnaB-like helicase C terminal domain KVU_0888 PF00156 Phosphoribosyl transferase domain KVU_0889 PF01979 Amidohydrolase family KVU_0891 PF00707 Translation initiation factor IF-3, C-terminal domain KVU_0891 PF05198 Translation initiation factor IF-3, N-terminal domain KVU_0892 PF00970 Oxidoreductase FAD-binding domain KVU_0892 PF00175 Oxidoreductase NAD-binding domain KVU_0894 PF00121 Triosephosphate isomerase KVU_0895 PF01521 Iron-sulphur cluster biosynthesis KVU_0896 PF01883 Iron-sulfur cluster assembly protein KVU_0897 PF01702 Queuine tRNA-ribosyltransferase KVU_0898 PF02190 ATP-dependent protease La (LON) substrate-binding domain KVU_0898 PF05362 Lon protease (S16) C-terminal proteolytic domain KVU_0898 PF00004 ATPase family associated with various cellular activities (AAA) KVU_0899 PF17209 Hfq protein KVU_0900 PF01926 50S ribosome-binding GTPase KVU_0900 PF13167 GTP-binding GTPase N-terminal KVU_0900 PF16360 GTP-binding GTPase Middle Region KVU_0901 PF07690 Major Facilitator Superfamily KVU_0903 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KVU_0904 PF04227 Indigoidine synthase A like protein KVU_0910 PF00005 ABC transporter KVU_0911 PF00528 Binding-protein-dependent transport system inner membrane component KVU_0913 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KVU_0913 PF03466 LysR substrate binding domain KVU_0914 PF07715 TonB-dependent Receptor Plug Domain KVU_0914 PF00593 TonB dependent receptor KVU_0917 PF01497 Periplasmic binding protein KVU_0918 PF01037 Lrp/AsnC ligand binding domain KVU_0919 PF00392 Bacterial regulatory proteins, gntR family KVU_0919 PF07729 FCD domain KVU_0920 PF02632 BioY family KVU_0921 PF02894 Oxidoreductase family, C-terminal alpha/beta domain KVU_0921 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KVU_0923 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KVU_0923 PF00005 ABC transporter KVU_0925 PF00480 ROK family KVU_0926 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KVU_0927 PF00528 Binding-protein-dependent transport system inner membrane component KVU_0928 PF12911 N-terminal TM domain of oligopeptide transport permease C KVU_0928 PF00528 Binding-protein-dependent transport system inner membrane component KVU_0929 PF00480 ROK family KVU_0930 PF03932 CutC family KVU_0931 PF00171 Aldehyde dehydrogenase family KVU_0933 PF01915 Glycosyl hydrolase family 3 C-terminal domain KVU_0933 PF00933 Glycosyl hydrolase family 3 N terminal domain KVU_0933 PF14310 Fibronectin type III-like domain KVU_0933 PF07691 PA14 domain KVU_0934 PF01425 Amidase KVU_0935 PF00005 ABC transporter KVU_0935 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KVU_0936 PF00005 ABC transporter KVU_0936 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KVU_0937 PF12911 N-terminal TM domain of oligopeptide transport permease C KVU_0937 PF00528 Binding-protein-dependent transport system inner membrane component KVU_0938 PF00528 Binding-protein-dependent transport system inner membrane component KVU_0939 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KVU_0940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KVU_0940 PF03466 LysR substrate binding domain KVU_0941 PF00202 Aminotransferase class-III KVU_0944 PF03576 Peptidase family S58 KVU_0946 PF00266 Aminotransferase class-V KVU_0947 PF01458 Uncharacterized protein family (UPF0051) KVU_0948 PF00005 ABC transporter KVU_0950 PF01458 Uncharacterized protein family (UPF0051) KVU_0951 PF00266 Aminotransferase class-V KVU_0952 PF02082 Transcriptional regulator KVU_0953 PF02129 X-Pro dipeptidyl-peptidase (S15 family) KVU_0957 PF00893 Small Multidrug Resistance protein KVU_0958 PF03144 Elongation factor Tu domain 2 KVU_0958 PF00009 Elongation factor Tu GTP binding domain KVU_0958 PF00679 Elongation factor G C-terminus KVU_0960 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KVU_0960 PF01411 tRNA synthetases class II (A) KVU_0960 PF02272 DHHA1 domain KVU_0961 PF00154 recA bacterial DNA recombination protein KVU_0962 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KVU_0962 PF00512 His Kinase A (phospho-acceptor) domain KVU_0962 PF00672 HAMP domain KVU_0964 PF00005 ABC transporter KVU_0964 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KVU_0965 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KVU_0965 PF00005 ABC transporter KVU_0967 PF00528 Binding-protein-dependent transport system inner membrane component KVU_0968 PF00528 Binding-protein-dependent transport system inner membrane component KVU_0969 PF00557 Metallopeptidase family M24 KVU_0969 PF01321 Creatinase/Prolidase N-terminal domain KVU_0970 PF00561 alpha/beta hydrolase fold KVU_0971 PF00561 alpha/beta hydrolase fold KVU_0972 PF12002 MgsA AAA+ ATPase C terminal KVU_0972 PF16193 AAA C-terminal domain KVU_0972 PF00004 ATPase family associated with various cellular activities (AAA) KVU_0973 PF08240 Alcohol dehydrogenase GroES-like domain KVU_0973 PF00107 Zinc-binding dehydrogenase KVU_0976 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KVU_0976 PF00005 ABC transporter KVU_0977 PF00528 Binding-protein-dependent transport system inner membrane component KVU_0977 PF12911 N-terminal TM domain of oligopeptide transport permease C KVU_0978 PF00528 Binding-protein-dependent transport system inner membrane component KVU_0979 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KVU_0980 PF13419 Haloacid dehalogenase-like hydrolase KVU_0981 PF00266 Aminotransferase class-V KVU_0982 PF00005 ABC transporter KVU_0982 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KVU_0983 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KVU_0983 PF00005 ABC transporter KVU_0984 PF00528 Binding-protein-dependent transport system inner membrane component KVU_0984 PF12911 N-terminal TM domain of oligopeptide transport permease C KVU_0985 PF00528 Binding-protein-dependent transport system inner membrane component KVU_0986 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KVU_0987 PF00881 Nitroreductase family KVU_0988 PF07690 Major Facilitator Superfamily KVU_0990 PF02743 Cache domain KVU_0990 PF00512 His Kinase A (phospho-acceptor) domain KVU_0990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KVU_0991 PF02954 Bacterial regulatory protein, Fis family KVU_0991 PF00072 Response regulator receiver domain KVU_0991 PF00158 Sigma-54 interaction domain KVU_0992 PF03401 Tripartite tricarboxylate transporter family receptor KVU_0994 PF01970 Tripartite tricarboxylate transporter TctA family KVU_0996 PF04237 YjbR KVU_0997 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KVU_0997 PF03466 LysR substrate binding domain KVU_0998 PF01546 Peptidase family M20/M25/M40 KVU_0998 PF07687 Peptidase dimerisation domain KVU_0999 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KVU_1000 PF00528 Binding-protein-dependent transport system inner membrane component KVU_1001 PF00528 Binding-protein-dependent transport system inner membrane component KVU_1001 PF12911 N-terminal TM domain of oligopeptide transport permease C KVU_1002 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KVU_1002 PF00005 ABC transporter KVU_1003 PF07969 Amidohydrolase family KVU_1004 PF07683 Cobalamin synthesis protein cobW C-terminal domain KVU_1004 PF02492 CobW/HypB/UreG, nucleotide-binding domain KVU_1006 PF12848 ABC transporter KVU_1006 PF00005 ABC transporter KVU_1007 PF01979 Amidohydrolase family KVU_1008 PF01638 HxlR-like helix-turn-helix KVU_1009 PF08448 PAS fold KVU_1009 PF13426 PAS domain KVU_1009 PF00563 EAL domain KVU_1009 PF08447 PAS fold KVU_1009 PF05231 MASE1 KVU_1009 PF00990 Diguanylate cyclase, GGDEF domain KVU_1013 PF02469 Fasciclin domain KVU_1017 PF00313 'Cold-shock' DNA-binding domain KVU_1024 PF00589 Phage integrase family KVU_1024 PF02899 Phage integrase, N-terminal SAM-like domain KVU_1025 PF04228 Putative neutral zinc metallopeptidase KVU_1026 PF02600 Disulfide bond formation protein DsbB KVU_1027 PF03989 DNA gyrase C-terminal domain, beta-propeller KVU_1027 PF00521 DNA gyrase/topoisomerase IV, subunit A KVU_1029 PF01134 Glucose inhibited division protein A KVU_1030 PF01502 Phosphoribosyl-AMP cyclohydrolase KVU_1031 PF00749 tRNA synthetases class I (E and Q), catalytic domain KVU_1034 PF00271 Helicase conserved C-terminal domain KVU_1034 PF00270 DEAD/DEAH box helicase KVU_1034 PF17191 RecG wedge domain KVU_1035 PF03119 NAD-dependent DNA ligase C4 zinc finger domain KVU_1035 PF01653 NAD-dependent DNA ligase adenylation domain KVU_1035 PF00533 BRCA1 C Terminus (BRCT) domain KVU_1035 PF12826 Helix-hairpin-helix motif KVU_1035 PF03120 NAD-dependent DNA ligase OB-fold domain KVU_1036 PF00486 Transcriptional regulatory protein, C terminal KVU_1036 PF00072 Response regulator receiver domain KVU_1038 PF02684 Lipid-A-disaccharide synthetase KVU_1041 PF00132 Bacterial transferase hexapeptide (six repeats) KVU_1041 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 KVU_1042 PF07977 FabA-like domain KVU_1044 PF07244 Surface antigen variable number repeat KVU_1044 PF01103 Surface antigen KVU_1045 PF02163 Peptidase family M50 KVU_1045 PF17820 PDZ domain KVU_1046 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain KVU_1046 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase KVU_1046 PF13288 DXP reductoisomerase C-terminal domain KVU_1048 PF01255 Putative undecaprenyl diphosphate synthase KVU_1049 PF01765 Ribosome recycling factor KVU_1056 PF00005 ABC transporter KVU_1057 PF00528 Binding-protein-dependent transport system inner membrane component KVU_1058 PF01546 Peptidase family M20/M25/M40 KVU_1058 PF07687 Peptidase dimerisation domain KVU_1059 PF09084 NMT1/THI5 like KVU_1060 PF07690 Major Facilitator Superfamily KVU_1061 PF00392 Bacterial regulatory proteins, gntR family KVU_1061 PF07729 FCD domain KVU_1063 PF00296 Luciferase-like monooxygenase KVU_1064 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KVU_1064 PF00005 ABC transporter KVU_1065 PF12911 N-terminal TM domain of oligopeptide transport permease C KVU_1065 PF00528 Binding-protein-dependent transport system inner membrane component KVU_1066 PF00528 Binding-protein-dependent transport system inner membrane component KVU_1067 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KVU_1069 PF09383 NIL domain KVU_1069 PF00005 ABC transporter KVU_1070 PF00528 Binding-protein-dependent transport system inner membrane component KVU_1071 PF03180 NLPA lipoprotein KVU_1073 PF01156 Inosine-uridine preferring nucleoside hydrolase KVU_1074 PF00156 Phosphoribosyl transferase domain KVU_1075 PF01979 Amidohydrolase family KVU_1075 PF13382 Adenine deaminase C-terminal domain KVU_1077 PF07687 Peptidase dimerisation domain KVU_1077 PF01546 Peptidase family M20/M25/M40 KVU_1078 PF08402 TOBE domain KVU_1078 PF00005 ABC transporter KVU_1080 PF00106 short chain dehydrogenase KVU_1081 PF12973 ChrR Cupin-like domain KVU_1082 PF04545 Sigma-70, region 4 KVU_1082 PF04542 Sigma-70 region 2 KVU_1083 PF00875 DNA photolyase KVU_1083 PF03441 FAD binding domain of DNA photolyase KVU_1085 PF13660 Domain of unknown function (DUF4147) KVU_1085 PF05161 MOFRL family KVU_1087 PF01042 Endoribonuclease L-PSP KVU_1088 PF02683 Cytochrome C biogenesis protein transmembrane region KVU_1091 PF00462 Glutaredoxin KVU_1092 PF07972 NrdI Flavodoxin like KVU_1093 PF08343 Ribonucleotide reductase N-terminal KVU_1093 PF00317 Ribonucleotide reductase, all-alpha domain KVU_1093 PF02867 Ribonucleotide reductase, barrel domain KVU_1094 PF00268 Ribonucleotide reductase, small chain KVU_1095 PF01266 FAD dependent oxidoreductase KVU_1097 PF08669 Glycine cleavage T-protein C-terminal barrel domain KVU_1097 PF01571 Aminomethyltransferase folate-binding domain KVU_1098 PF01597 Glycine cleavage H-protein KVU_1099 PF02347 Glycine cleavage system P-protein KVU_1104 PF13404 AsnC-type helix-turn-helix domain KVU_1104 PF01037 Lrp/AsnC ligand binding domain KVU_1105 PF12857 TOBE-like domain KVU_1105 PF00005 ABC transporter KVU_1107 PF00528 Binding-protein-dependent transport system inner membrane component KVU_1108 PF00924 Mechanosensitive ion channel KVU_1108 PF12795 Mechanosensitive ion channel porin domain KVU_1108 PF12794 Mechanosensitive ion channel inner membrane domain 1 KVU_1109 PF00528 Binding-protein-dependent transport system inner membrane component KVU_1110 PF00571 CBS domain KVU_1110 PF00291 Pyridoxal-phosphate dependent enzyme KVU_1117 PF00206 Lyase KVU_1117 PF10415 Fumarase C C-terminus KVU_1119 PF00067 Cytochrome P450 KVU_1122 PF00342 Phosphoglucose isomerase KVU_1123 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase KVU_1124 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain KVU_1124 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain KVU_1126 PF09285 Elongation factor P, C-terminal KVU_1126 PF08207 Elongation factor P (EF-P) KOW-like domain KVU_1126 PF01132 Elongation factor P (EF-P) OB domain KVU_1127 PF00152 tRNA synthetases class II (D, K and N) KVU_1128 PF00334 Nucleoside diphosphate kinase KVU_1129 PF00005 ABC transporter KVU_1129 PF12848 ABC transporter KVU_1130 PF03707 Bacterial signalling protein N terminal repeat KVU_1130 PF00563 EAL domain KVU_1130 PF00990 Diguanylate cyclase, GGDEF domain KVU_1130 PF13188 PAS domain KVU_1131 PF01914 MarC family integral membrane protein KVU_1134 PF00005 ABC transporter KVU_1137 PF03437 BtpA family KVU_1138 PF00106 short chain dehydrogenase KVU_1139 PF02782 FGGY family of carbohydrate kinases, C-terminal domain KVU_1139 PF00370 FGGY family of carbohydrate kinases, N-terminal domain KVU_1140 PF01979 Amidohydrolase family KVU_1142 PF08220 DeoR-like helix-turn-helix domain KVU_1142 PF00455 DeoR C terminal sensor domain KVU_1143 PF01979 Amidohydrolase family KVU_1145 PF00677 Lumazine binding domain KVU_1146 PF00883 Cytosol aminopeptidase family, catalytic domain KVU_1147 PF03739 Lipopolysaccharide export system permease LptF/LptG KVU_1151 PF04166 Pyridoxal phosphate biosynthetic protein PdxA KVU_1152 PF00398 Ribosomal RNA adenine dimethylase KVU_1154 PF17827 PrmC N-terminal domain KVU_1154 PF05175 Methyltransferase small domain KVU_1155 PF00472 RF-1 domain KVU_1155 PF03462 PCRF domain KVU_1157 PF04204 Homoserine O-succinyltransferase KVU_1158 PF00005 ABC transporter KVU_1158 PF08402 TOBE domain KVU_1159 PF13977 BetI-type transcriptional repressor, C-terminal KVU_1159 PF00440 Bacterial regulatory proteins, tetR family KVU_1160 PF00528 Binding-protein-dependent transport system inner membrane component KVU_1161 PF00528 Binding-protein-dependent transport system inner membrane component KVU_1162 PF00380 Ribosomal protein S9/S16 KVU_1163 PF00572 Ribosomal protein L13 KVU_1164 PF02074 Carboxypeptidase Taq (M32) metallopeptidase KVU_1165 PF02628 Cytochrome oxidase assembly protein KVU_1166 PF00588 SpoU rRNA Methylase family KVU_1167 PF03364 Polyketide cyclase / dehydrase and lipid transport KVU_1169 PF00156 Phosphoribosyl transferase domain KVU_1173 PF00958 GMP synthase C terminal domain KVU_1173 PF02540 NAD synthase KVU_1173 PF00117 Glutamine amidotransferase class-I KVU_1176 PF01207 Dihydrouridine synthase (Dus) KVU_1177 PF03652 Holliday junction resolvase KVU_1178 PF00873 AcrB/AcrD/AcrF family KVU_1179 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KVU_1180 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KVU_1181 PF00528 Binding-protein-dependent transport system inner membrane component KVU_1182 PF12911 N-terminal TM domain of oligopeptide transport permease C KVU_1182 PF00528 Binding-protein-dependent transport system inner membrane component KVU_1183 PF00005 ABC transporter KVU_1183 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KVU_1186 PF02541 Ppx/GppA phosphatase family KVU_1187 PF02685 Glucokinase KVU_1188 PF00296 Luciferase-like monooxygenase KVU_1193 PF14403 Circularly permuted ATP-grasp type 2 KVU_1194 PF02875 Mur ligase family, glutamate ligase domain KVU_1194 PF08245 Mur ligase middle domain KVU_1195 PF06463 Molybdenum Cofactor Synthesis C KVU_1195 PF04055 Radical SAM superfamily KVU_1197 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) KVU_1198 PF00534 Glycosyl transferases group 1 KVU_1199 PF01266 FAD dependent oxidoreductase KVU_1200 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain KVU_1200 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain KVU_1201 PF02233 NAD(P) transhydrogenase beta subunit KVU_1202 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch KVU_1202 PF01262 Alanine dehydrogenase/PNT, C-terminal domain KVU_1202 PF05222 Alanine dehydrogenase/PNT, N-terminal domain KVU_1203 PF07722 Peptidase C26 KVU_1204 PF01274 Malate synthase KVU_1205 PF17432 Domain of unknown function (DUF3458_C) ARM repeats KVU_1205 PF01433 Peptidase family M1 domain KVU_1205 PF11940 Domain of unknown function (DUF3458) Ig-like fold KVU_1207 PF02934 GatB/GatE catalytic domain KVU_1207 PF02637 GatB domain KVU_1210 PF00226 DnaJ domain KVU_1210 PF00684 DnaJ central domain KVU_1210 PF01556 DnaJ C terminal domain KVU_1211 PF12556 Cobaltochelatase CobS subunit N terminal KVU_1211 PF08406 CbbQ/NirQ/NorQ C-terminal KVU_1211 PF07728 AAA domain (dynein-related subfamily) KVU_1212 PF03358 NADPH-dependent FMN reductase KVU_1213 PF01638 HxlR-like helix-turn-helix KVU_1214 PF11775 Cobalamin biosynthesis protein CobT VWA domain KVU_1214 PF06213 Cobalamin biosynthesis protein CobT KVU_1216 PF00364 Biotin-requiring enzyme KVU_1217 PF00289 Biotin carboxylase, N-terminal domain KVU_1217 PF02785 Biotin carboxylase C-terminal domain KVU_1217 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KVU_1219 PF03588 Leucyl/phenylalanyl-tRNA protein transferase KVU_1221 PF07724 AAA domain (Cdc48 subfamily) KVU_1221 PF06689 ClpX C4-type zinc finger KVU_1221 PF10431 C-terminal, D2-small domain, of ClpB protein KVU_1222 PF00574 Clp protease KVU_1226 PF03631 Virulence factor BrkB KVU_1227 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KVU_1227 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KVU_1227 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KVU_1227 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KVU_1229 PF03477 ATP cone domain KVU_1230 PF05159 Capsule polysaccharide biosynthesis protein KVU_1232 PF03979 Sigma-70 factor, region 1.1 KVU_1232 PF04545 Sigma-70, region 4 KVU_1232 PF04546 Sigma-70, non-essential region KVU_1232 PF00140 Sigma-70 factor, region 1.2 KVU_1232 PF04542 Sigma-70 region 2 KVU_1232 PF04539 Sigma-70 region 3 KVU_1233 PF10410 DnaB-helicase binding domain of primase KVU_1233 PF01807 CHC2 zinc finger KVU_1233 PF08275 DNA primase catalytic core, N-terminal domain KVU_1233 PF08278 DNA primase DnaG DnaB-binding KVU_1234 PF03471 Transporter associated domain KVU_1234 PF01595 Cyclin M transmembrane N-terminal domain KVU_1234 PF00571 CBS domain KVU_1235 PF01261 Xylose isomerase-like TIM barrel KVU_1236 PF00923 Transaldolase/Fructose-6-phosphate aldolase KVU_1238 PF02899 Phage integrase, N-terminal SAM-like domain KVU_1238 PF00589 Phage integrase family KVU_1239 PF00133 tRNA synthetases class I (I, L, M and V) KVU_1239 PF08264 Anticodon-binding domain of tRNA KVU_1240 PF05128 Domain of unknown function (DUF697) KVU_1241 PF04317 YcjX-like family, DUF463 KVU_1242 PF01416 tRNA pseudouridine synthase KVU_1243 PF07244 Surface antigen variable number repeat KVU_1243 PF01103 Surface antigen KVU_1243 PF17243 POTRA domain TamA domain 1 KVU_1246 PF18255 DNA processing protein A sterile alpha motif domain KVU_1246 PF02481 DNA recombination-mediator protein A KVU_1247 PF01751 Toprim domain KVU_1247 PF01396 Topoisomerase DNA binding C4 zinc finger KVU_1247 PF13368 Topoisomerase C-terminal repeat KVU_1247 PF01131 DNA topoisomerase KVU_1248 PF00672 HAMP domain KVU_1248 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KVU_1249 PF03975 CheD chemotactic sensory transduction KVU_1250 PF00072 Response regulator receiver domain KVU_1250 PF01339 CheB methylesterase KVU_1252 PF00072 Response regulator receiver domain KVU_1253 PF01627 Hpt domain KVU_1253 PF01584 CheW-like domain KVU_1253 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KVU_1253 PF02895 Signal transducing histidine kinase, homodimeric domain KVU_1254 PF01584 CheW-like domain KVU_1255 PF03705 CheR methyltransferase, all-alpha domain KVU_1255 PF01739 CheR methyltransferase, SAM binding domain KVU_1256 PF00072 Response regulator receiver domain KVU_1258 PF01380 SIS domain KVU_1259 PF07687 Peptidase dimerisation domain KVU_1259 PF01546 Peptidase family M20/M25/M40 KVU_1260 PF00155 Aminotransferase class I and II KVU_1261 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KVU_1261 PF00005 ABC transporter KVU_1262 PF00005 ABC transporter KVU_1262 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KVU_1263 PF12911 N-terminal TM domain of oligopeptide transport permease C KVU_1263 PF00528 Binding-protein-dependent transport system inner membrane component KVU_1264 PF00528 Binding-protein-dependent transport system inner membrane component KVU_1265 PF01323 DSBA-like thioredoxin domain KVU_1266 PF05378 Hydantoinase/oxoprolinase N-terminal region KVU_1266 PF01968 Hydantoinase/oxoprolinase KVU_1269 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KVU_1270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KVU_1270 PF03466 LysR substrate binding domain KVU_1271 PF00557 Metallopeptidase family M24 KVU_1271 PF01321 Creatinase/Prolidase N-terminal domain KVU_1272 PF01958 Domain of unknown function DUF108 KVU_1272 PF03447 Homoserine dehydrogenase, NAD binding domain KVU_1274 PF00561 alpha/beta hydrolase fold KVU_1275 PF03480 Bacterial extracellular solute-binding protein, family 7 KVU_1276 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component KVU_1276 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component KVU_1278 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KVU_1278 PF00378 Enoyl-CoA hydratase/isomerase KVU_1278 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KVU_1281 PF00392 Bacterial regulatory proteins, gntR family KVU_1281 PF07729 FCD domain KVU_1283 PF00392 Bacterial regulatory proteins, gntR family KVU_1283 PF07729 FCD domain KVU_1284 PF03972 MmgE/PrpD family KVU_1285 PF01970 Tripartite tricarboxylate transporter TctA family KVU_1287 PF03401 Tripartite tricarboxylate transporter family receptor KVU_1289 PF01613 Flavin reductase like domain KVU_1291 PF00005 ABC transporter KVU_1292 PF00528 Binding-protein-dependent transport system inner membrane component KVU_1293 PF00296 Luciferase-like monooxygenase KVU_1297 PF00296 Luciferase-like monooxygenase KVU_1298 PF01384 Phosphate transporter family KVU_1300 PF02954 Bacterial regulatory protein, Fis family KVU_1300 PF00072 Response regulator receiver domain KVU_1300 PF00158 Sigma-54 interaction domain KVU_1301 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KVU_1301 PF00512 His Kinase A (phospho-acceptor) domain KVU_1302 PF00375 Sodium:dicarboxylate symporter family KVU_1303 PF07690 Major Facilitator Superfamily KVU_1304 PF00005 ABC transporter KVU_1304 PF03459 TOBE domain KVU_1310 PF00106 short chain dehydrogenase KVU_1312 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase KVU_1313 PF03033 Glycosyltransferase family 28 N-terminal domain KVU_1314 PF00668 Condensation domain KVU_1314 PF13193 AMP-binding enzyme C-terminal domain KVU_1314 PF00501 AMP-binding enzyme KVU_1314 PF00975 Thioesterase domain KVU_1314 PF00550 Phosphopantetheine attachment site KVU_1317 PF01380 SIS domain KVU_1317 PF00571 CBS domain KVU_1319 PF01925 Sulfite exporter TauE/SafE KVU_1320 PF01557 Fumarylacetoacetate (FAA) hydrolase family KVU_1321 PF00528 Binding-protein-dependent transport system inner membrane component KVU_1322 PF00005 ABC transporter KVU_1323 PF00528 Binding-protein-dependent transport system inner membrane component KVU_1325 PF07729 FCD domain KVU_1325 PF00392 Bacterial regulatory proteins, gntR family KVU_1326 PF03971 Monomeric isocitrate dehydrogenase KVU_1327 PF03459 TOBE domain KVU_1327 PF00005 ABC transporter KVU_1327 PF17912 MalK OB fold domain KVU_1328 PF00128 Alpha amylase, catalytic domain KVU_1329 PF00528 Binding-protein-dependent transport system inner membrane component KVU_1330 PF00528 Binding-protein-dependent transport system inner membrane component KVU_1331 PF01547 Bacterial extracellular solute-binding protein KVU_1332 PF00356 Bacterial regulatory proteins, lacI family KVU_1334 PF00232 Glycosyl hydrolase family 1 KVU_1335 PF01177 Asp/Glu/Hydantoin racemase KVU_1336 PF12852 Cupin KVU_1336 PF12833 Helix-turn-helix domain KVU_1340 PF01740 STAS domain KVU_1340 PF00916 Sulfate permease family KVU_1341 PF00106 short chain dehydrogenase KVU_1342 PF03746 LamB/YcsF family KVU_1344 PF02785 Biotin carboxylase C-terminal domain KVU_1344 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KVU_1344 PF00289 Biotin carboxylase, N-terminal domain KVU_1345 PF00364 Biotin-requiring enzyme KVU_1348 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family KVU_1348 PF00356 Bacterial regulatory proteins, lacI family KVU_1349 PF00155 Aminotransferase class I and II KVU_1352 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KVU_1352 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KVU_1353 PF08240 Alcohol dehydrogenase GroES-like domain KVU_1353 PF00107 Zinc-binding dehydrogenase KVU_1354 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KVU_1354 PF03466 LysR substrate binding domain KVU_1357 PF00528 Binding-protein-dependent transport system inner membrane component KVU_1358 PF00528 Binding-protein-dependent transport system inner membrane component KVU_1360 PF00005 ABC transporter KVU_1360 PF08402 TOBE domain KVU_1362 PF00005 ABC transporter KVU_1362 PF08402 TOBE domain KVU_1363 PF00528 Binding-protein-dependent transport system inner membrane component KVU_1364 PF03737 Aldolase/RraA KVU_1365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KVU_1365 PF03466 LysR substrate binding domain KVU_1366 PF13360 PQQ-like domain KVU_1366 PF01011 PQQ enzyme repeat KVU_1368 PF09704 CRISPR-associated protein (Cas_Cas5) KVU_1371 PF09827 CRISPR associated protein Cas2 KVU_1372 PF00171 Aldehyde dehydrogenase family KVU_1373 PF00005 ABC transporter KVU_1374 PF00005 ABC transporter KVU_1374 PF12399 Branched-chain amino acid ATP-binding cassette transporter KVU_1376 PF02653 Branched-chain amino acid transport system / permease component KVU_1378 PF12833 Helix-turn-helix domain KVU_1378 PF06445 GyrI-like small molecule binding domain KVU_1379 PF12706 Beta-lactamase superfamily domain KVU_1380 PF01965 DJ-1/PfpI family KVU_1380 PF12833 Helix-turn-helix domain KVU_1384 PF07690 Major Facilitator Superfamily KVU_1385 PF01425 Amidase KVU_1387 PF00528 Binding-protein-dependent transport system inner membrane component KVU_1388 PF00528 Binding-protein-dependent transport system inner membrane component KVU_1389 PF00005 ABC transporter KVU_1389 PF08402 TOBE domain KVU_1391 PF00732 GMC oxidoreductase KVU_1391 PF05199 GMC oxidoreductase KVU_1393 PF00857 Isochorismatase family KVU_1394 PF03466 LysR substrate binding domain KVU_1394 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KVU_1397 PF00171 Aldehyde dehydrogenase family KVU_1399 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KVU_1399 PF00005 ABC transporter KVU_1400 PF01546 Peptidase family M20/M25/M40 KVU_1400 PF07687 Peptidase dimerisation domain KVU_1401 PF12911 N-terminal TM domain of oligopeptide transport permease C KVU_1401 PF00528 Binding-protein-dependent transport system inner membrane component KVU_1402 PF00528 Binding-protein-dependent transport system inner membrane component KVU_1403 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KVU_1408 PF02245 Methylpurine-DNA glycosylase (MPG) KVU_1411 PF00296 Luciferase-like monooxygenase KVU_1413 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) KVU_1413 PF00128 Alpha amylase, catalytic domain KVU_1414 PF02806 Alpha amylase, C-terminal all-beta domain KVU_1414 PF00128 Alpha amylase, catalytic domain KVU_1414 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) KVU_1415 PF00534 Glycosyl transferases group 1 KVU_1415 PF08323 Starch synthase catalytic domain KVU_1416 PF08450 SMP-30/Gluconolactonase/LRE-like region KVU_1417 PF00128 Alpha amylase, catalytic domain KVU_1417 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) KVU_1418 PF00483 Nucleotidyl transferase KVU_1419 PF00723 Glycosyl hydrolases family 15 KVU_1421 PF00106 short chain dehydrogenase KVU_1422 PF08281 Sigma-70, region 4 KVU_1422 PF04542 Sigma-70 region 2 KVU_1426 PF07690 Major Facilitator Superfamily KVU_1427 PF01614 Bacterial transcriptional regulator KVU_1427 PF09339 IclR helix-turn-helix domain KVU_1428 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KVU_1428 PF00005 ABC transporter KVU_1429 PF00005 ABC transporter KVU_1429 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KVU_1430 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KVU_1431 PF00528 Binding-protein-dependent transport system inner membrane component KVU_1432 PF00528 Binding-protein-dependent transport system inner membrane component KVU_1432 PF12911 N-terminal TM domain of oligopeptide transport permease C KVU_1433 PF01979 Amidohydrolase family KVU_1437 PF01381 Helix-turn-helix KVU_1440 PF00004 ATPase family associated with various cellular activities (AAA) KVU_1440 PF17862 AAA+ lid domain KVU_1440 PF01434 Peptidase family M41 KVU_1440 PF06480 FtsH Extracellular KVU_1443 PF00392 Bacterial regulatory proteins, gntR family KVU_1443 PF07702 UTRA domain KVU_1444 PF00171 Aldehyde dehydrogenase family KVU_1445 PF00696 Amino acid kinase family KVU_1445 PF01472 PUA domain KVU_1446 PF01018 GTP1/OBG KVU_1446 PF01926 50S ribosome-binding GTPase KVU_1448 PF01016 Ribosomal L27 protein KVU_1449 PF00829 Ribosomal prokaryotic L21 protein KVU_1451 PF17760 UvrA interaction domain KVU_1451 PF00005 ABC transporter KVU_1451 PF17755 UvrA DNA-binding domain KVU_1453 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KVU_1453 PF07992 Pyridine nucleotide-disulphide oxidoreductase KVU_1455 PF02547 Queuosine biosynthesis protein KVU_1457 PF00578 AhpC/TSA family KVU_1458 PF01551 Peptidase family M23 KVU_1458 PF01476 LysM domain KVU_1458 PF08525 Opacity-associated protein A N-terminal motif KVU_1461 PF00753 Metallo-beta-lactamase superfamily KVU_1461 PF04273 Putative phosphatase (DUF442) KVU_1462 PF07859 alpha/beta hydrolase fold KVU_1463 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD KVU_1466 PF00953 Glycosyl transferase family 4 KVU_1466 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 KVU_1468 PF01795 MraW methylase family KVU_1469 PF02381 MraZ protein, putative antitoxin-like KVU_1471 PF10609 NUBPL iron-transfer P-loop NTPase KVU_1473 PF03594 Benzoate membrane transport protein KVU_1475 PF13361 UvrD-like helicase C-terminal domain KVU_1475 PF00580 UvrD/REP helicase N-terminal domain KVU_1476 PF02785 Biotin carboxylase C-terminal domain KVU_1476 PF00289 Biotin carboxylase, N-terminal domain KVU_1476 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KVU_1476 PF02436 Conserved carboxylase domain KVU_1476 PF00364 Biotin-requiring enzyme KVU_1476 PF00682 HMGL-like KVU_1477 PF16177 Acetyl-coenzyme A synthetase N-terminus KVU_1477 PF00501 AMP-binding enzyme KVU_1477 PF13193 AMP-binding enzyme C-terminal domain KVU_1478 PF02463 RecF/RecN/SMC N terminal domain KVU_1478 PF13476 AAA domain KVU_1479 PF13525 Outer membrane lipoprotein KVU_1480 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase KVU_1481 PF00091 Tubulin/FtsZ family, GTPase domain KVU_1481 PF12327 FtsZ family, C-terminal domain KVU_1482 PF01225 Mur ligase family, catalytic domain KVU_1482 PF02875 Mur ligase family, glutamate ligase domain KVU_1482 PF08245 Mur ligase middle domain KVU_1483 PF03033 Glycosyltransferase family 28 N-terminal domain KVU_1483 PF04101 Glycosyltransferase family 28 C-terminal domain KVU_1484 PF01098 Cell cycle protein KVU_1487 PF10073 Uncharacterized protein conserved in bacteria (DUF2312) KVU_1491 PF13286 Phosphohydrolase-associated domain KVU_1491 PF01966 HD domain KVU_1492 PF01521 Iron-sulphur cluster biosynthesis KVU_1493 PF01494 FAD binding domain KVU_1495 PF01258 Prokaryotic dksA/traR C4-type zinc finger KVU_1499 PF10672 S-adenosylmethionine-dependent methyltransferase KVU_1499 PF17785 PUA-like domain KVU_1500 PF08335 GlnD PII-uridylyltransferase KVU_1500 PF03710 Glutamate-ammonia ligase adenylyltransferase KVU_1501 PF07726 ATPase family associated with various cellular activities (AAA) KVU_1501 PF17863 AAA lid domain KVU_1507 PF00011 Hsp20/alpha crystallin family KVU_1509 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain KVU_1509 PF00476 DNA polymerase family A KVU_1509 PF01367 5'-3' exonuclease, C-terminal SAM fold KVU_1509 PF01612 3'-5' exonuclease KVU_1511 PF01230 HIT domain KVU_1514 PF02511 Thymidylate synthase complementing protein KVU_1515 PF02659 Putative manganese efflux pump KVU_1517 PF00902 Sec-independent protein translocase protein (TatC) KVU_1518 PF02416 mttA/Hcf106 family KVU_1519 PF02416 mttA/Hcf106 family KVU_1522 PF03144 Elongation factor Tu domain 2 KVU_1522 PF16658 Class II release factor RF3, C-terminal domain KVU_1522 PF00009 Elongation factor Tu GTP binding domain KVU_1525 PF00528 Binding-protein-dependent transport system inner membrane component KVU_1526 PF00528 Binding-protein-dependent transport system inner membrane component KVU_1527 PF00005 ABC transporter KVU_1528 PF01895 PhoU domain KVU_1529 PF00072 Response regulator receiver domain KVU_1529 PF00486 Transcriptional regulatory protein, C terminal KVU_1534 PF00528 Binding-protein-dependent transport system inner membrane component KVU_1535 PF00528 Binding-protein-dependent transport system inner membrane component KVU_1536 PF00005 ABC transporter KVU_1537 PF09084 NMT1/THI5 like KVU_1540 PF03275 UDP-galactopyranose mutase KVU_1543 PF04445 Putative SAM-dependent methyltransferase KVU_1555 PF00816 H-NS histone family KVU_1559 PF14602 Hexapeptide repeat of succinyl-transferase KVU_1559 PF12464 Maltose acetyltransferase KVU_1580 PF03449 Transcription elongation factor, N-terminal KVU_1580 PF01272 Transcription elongation factor, GreA/GreB, C-term KVU_1581 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KVU_1581 PF13426 PAS domain KVU_1581 PF00072 Response regulator receiver domain KVU_1588 PF10073 Uncharacterized protein conserved in bacteria (DUF2312) KVU_1596 PF00550 Phosphopantetheine attachment site KVU_1599 PF00550 Phosphopantetheine attachment site KVU_1600 PF02767 DNA polymerase III beta subunit, central domain KVU_1600 PF02768 DNA polymerase III beta subunit, C-terminal domain KVU_1600 PF00712 DNA polymerase III beta subunit, N-terminal domain KVU_1602 PF00436 Single-strand binding protein family KVU_1604 PF02899 Phage integrase, N-terminal SAM-like domain KVU_1604 PF00589 Phage integrase family KVU_1607 PF00815 Histidinol dehydrogenase KVU_1608 PF06793 Uncharacterised protein family (UPF0262) KVU_1609 PF03918 Cytochrome C biogenesis protein KVU_1610 PF01176 Translation initiation factor 1A / IF-1 KVU_1611 PF02545 Maf-like protein KVU_1612 PF12111 Polyribonucleotide phosphorylase C terminal KVU_1612 PF10150 Ribonuclease E/G family KVU_1612 PF00575 S1 RNA binding domain KVU_1613 PF13193 AMP-binding enzyme C-terminal domain KVU_1613 PF00501 AMP-binding enzyme KVU_1614 PF03884 DNA gyrase inhibitor YacG KVU_1615 PF00005 ABC transporter KVU_1615 PF00664 ABC transporter transmembrane region KVU_1616 PF05746 DALR anticodon binding domain KVU_1616 PF02092 Glycyl-tRNA synthetase beta subunit KVU_1618 PF02091 Glycyl-tRNA synthetase alpha subunit KVU_1620 PF00912 Transglycosylase KVU_1621 PF13417 Glutathione S-transferase, N-terminal domain KVU_1621 PF00043 Glutathione S-transferase, C-terminal domain KVU_1622 PF08331 Domain of unknown function (DUF1730) KVU_1623 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain KVU_1625 PF16653 Saccharopine dehydrogenase C-terminal domain KVU_1625 PF03435 Saccharopine dehydrogenase NADP binding domain KVU_1626 PF00892 EamA-like transporter family KVU_1627 PF02926 THUMP domain KVU_1627 PF01170 Putative RNA methylase family UPF0020 KVU_1627 PF10672 S-adenosylmethionine-dependent methyltransferase KVU_1628 PF01042 Endoribonuclease L-PSP KVU_1629 PF02633 Creatinine amidohydrolase KVU_1630 PF07969 Amidohydrolase family KVU_1632 PF02525 Flavodoxin-like fold KVU_1633 PF00005 ABC transporter KVU_1634 PF00528 Binding-protein-dependent transport system inner membrane component KVU_1640 PF13416 Bacterial extracellular solute-binding protein KVU_1641 PF00528 Binding-protein-dependent transport system inner membrane component KVU_1642 PF00528 Binding-protein-dependent transport system inner membrane component KVU_1643 PF14698 Argininosuccinate lyase C-terminal KVU_1643 PF00206 Lyase KVU_1644 PF00005 ABC transporter KVU_1645 PF00294 pfkB family carbohydrate kinase KVU_1646 PF02386 Cation transport protein KVU_1647 PF02254 TrkA-N domain KVU_1647 PF02080 TrkA-C domain KVU_1652 PF00579 tRNA synthetases class I (W and Y) KVU_1653 PF01475 Ferric uptake regulator family KVU_1654 PF00892 EamA-like transporter family KVU_1655 PF03952 Enolase, N-terminal domain KVU_1655 PF00113 Enolase, C-terminal TIM barrel domain KVU_1656 PF03772 Competence protein KVU_1656 PF00753 Metallo-beta-lactamase superfamily KVU_1658 PF00749 tRNA synthetases class I (E and Q), catalytic domain KVU_1659 PF00285 Citrate synthase, C-terminal domain KVU_1660 PF03918 Cytochrome C biogenesis protein KVU_1661 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal KVU_1661 PF01578 Cytochrome C assembly protein KVU_1662 PF03100 CcmE KVU_1663 PF01118 Semialdehyde dehydrogenase, NAD binding domain KVU_1663 PF02774 Semialdehyde dehydrogenase, dimerisation domain KVU_1664 PF01177 Asp/Glu/Hydantoin racemase KVU_1665 PF03466 LysR substrate binding domain KVU_1665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KVU_1666 PF02769 AIR synthase related protein, C-terminal domain KVU_1666 PF00586 AIR synthase related protein, N-terminal domain KVU_1666 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain KVU_1667 PF01722 BolA-like protein KVU_1668 PF00462 Glutaredoxin KVU_1671 PF00456 Transketolase, thiamine diphosphate binding domain KVU_1671 PF02780 Transketolase, C-terminal domain KVU_1671 PF02779 Transketolase, pyrimidine binding domain KVU_1672 PF05661 Protein of unknown function (DUF808) KVU_1674 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain KVU_1674 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain KVU_1675 PF01467 Cytidylyltransferase-like KVU_1677 PF01494 FAD binding domain KVU_1678 PF01029 NusB family KVU_1680 PF07509 Protein of unknown function (DUF1523) KVU_1682 PF14437 MafB19-like deaminase KVU_1683 PF01479 S4 domain KVU_1683 PF00849 RNA pseudouridylate synthase KVU_1685 PF05816 Toxic anion resistance protein (TelA) KVU_1689 PF00294 pfkB family carbohydrate kinase KVU_1690 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain KVU_1690 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain KVU_1691 PF02580 D-Tyr-tRNA(Tyr) deacylase KVU_1692 PF01434 Peptidase family M41 KVU_1692 PF06480 FtsH Extracellular KVU_1692 PF17862 AAA+ lid domain KVU_1692 PF00004 ATPase family associated with various cellular activities (AAA) KVU_1693 PF01171 PP-loop family KVU_1695 PF00691 OmpA family KVU_1696 PF07676 WD40-like Beta Propeller Repeat KVU_1696 PF04052 TolB amino-terminal domain KVU_1698 PF02472 Biopolymer transport protein ExbD/TolR KVU_1699 PF01618 MotA/TolQ/ExbB proton channel family KVU_1700 PF03061 Thioesterase superfamily KVU_1702 PF05496 Holliday junction DNA helicase RuvB P-loop domain KVU_1702 PF05491 RuvB C-terminal winged helix domain KVU_1702 PF17864 RuvB AAA lid domain KVU_1703 PF01330 RuvA N terminal domain KVU_1703 PF07499 RuvA, C-terminal domain KVU_1704 PF02075 Crossover junction endodeoxyribonuclease RuvC KVU_1706 PF01634 ATP phosphoribosyltransferase KVU_1707 PF13393 Histidyl-tRNA synthetase KVU_1708 PF13393 Histidyl-tRNA synthetase KVU_1708 PF03129 Anticodon binding domain KVU_1710 PF07733 Bacterial DNA polymerase III alpha NTPase domain KVU_1710 PF14579 Helix-hairpin-helix motif KVU_1710 PF17657 Bacterial DNA polymerase III alpha subunit finger domain KVU_1710 PF02811 PHP domain KVU_1711 PF07237 Protein of unknown function (DUF1428) KVU_1713 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme KVU_1714 PF02872 5'-nucleotidase, C-terminal domain KVU_1714 PF00149 Calcineurin-like phosphoesterase KVU_1716 PF01180 Dihydroorotate dehydrogenase KVU_1717 PF09278 MerR, DNA binding KVU_1717 PF00376 MerR family regulatory protein KVU_1722 PF00962 Adenosine/AMP deaminase KVU_1723 PF01676 Metalloenzyme superfamily KVU_1725 PF01513 ATP-NAD kinase KVU_1727 PF00561 alpha/beta hydrolase fold KVU_1728 PF00679 Elongation factor G C-terminus KVU_1728 PF00009 Elongation factor Tu GTP binding domain KVU_1728 PF06421 GTP-binding protein LepA C-terminus KVU_1734 PF06055 Exopolysaccharide synthesis, ExoD KVU_1735 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain KVU_1735 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain KVU_1736 PF00202 Aminotransferase class-III KVU_1738 PF03180 NLPA lipoprotein KVU_1739 PF05532 CsbD-like KVU_1741 PF00206 Lyase KVU_1741 PF10415 Fumarase C C-terminus KVU_1744 PF01618 MotA/TolQ/ExbB proton channel family KVU_1745 PF02472 Biopolymer transport protein ExbD/TolR KVU_1747 PF13505 Outer membrane protein beta-barrel domain KVU_1750 PF01037 Lrp/AsnC ligand binding domain KVU_1751 PF14850 DNA-binding domain of Proline dehydrogenase KVU_1751 PF01619 Proline dehydrogenase KVU_1751 PF00171 Aldehyde dehydrogenase family KVU_1751 PF18327 Proline utilization A proline dehydrogenase N-terminal domain KVU_1753 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KVU_1753 PF03466 LysR substrate binding domain KVU_1754 PF02219 Methylenetetrahydrofolate reductase KVU_1755 PF08264 Anticodon-binding domain of tRNA KVU_1755 PF00133 tRNA synthetases class I (I, L, M and V) KVU_1755 PF10458 Valyl tRNA synthetase tRNA binding arm KVU_1756 PF00266 Aminotransferase class-V KVU_1757 PF00155 Aminotransferase class I and II KVU_1760 PF00005 ABC transporter KVU_1760 PF00664 ABC transporter transmembrane region KVU_1761 PF00459 Inositol monophosphatase family KVU_1762 PF01571 Aminomethyltransferase folate-binding domain KVU_1762 PF08669 Glycine cleavage T-protein C-terminal barrel domain KVU_1763 PF08207 Elongation factor P (EF-P) KOW-like domain KVU_1763 PF09285 Elongation factor P, C-terminal KVU_1763 PF01132 Elongation factor P (EF-P) OB domain KVU_1768 PF02798 Glutathione S-transferase, N-terminal domain KVU_1768 PF00043 Glutathione S-transferase, C-terminal domain KVU_1769 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KVU_1769 PF00986 DNA gyrase B subunit, carboxyl terminus KVU_1769 PF00204 DNA gyrase B KVU_1769 PF01751 Toprim domain KVU_1771 PF00226 DnaJ domain KVU_1771 PF05099 Tellurite resistance protein TerB KVU_1772 PF00795 Carbon-nitrogen hydrolase KVU_1772 PF02540 NAD synthase KVU_1774 PF08502 LeuA allosteric (dimerisation) domain KVU_1774 PF00682 HMGL-like KVU_1780 PF01709 Transcriptional regulator KVU_1781 PF13277 YmdB-like protein KVU_1783 PF01769 Divalent cation transporter KVU_1783 PF03448 MgtE intracellular N domain KVU_1783 PF00571 CBS domain KVU_1785 PF01037 Lrp/AsnC ligand binding domain KVU_1786 PF07690 Major Facilitator Superfamily KVU_1787 PF00459 Inositol monophosphatase family KVU_1788 PF13286 Phosphohydrolase-associated domain KVU_1788 PF01966 HD domain KVU_1789 PF01381 Helix-turn-helix KVU_1790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KVU_1790 PF03466 LysR substrate binding domain KVU_1792 PF01027 Inhibitor of apoptosis-promoting Bax1 KVU_1793 PF03358 NADPH-dependent FMN reductase KVU_1795 PF00543 Nitrogen regulatory protein P-II KVU_1796 PF03951 Glutamine synthetase, beta-Grasp domain KVU_1796 PF00120 Glutamine synthetase, catalytic domain KVU_1797 PF00206 Lyase KVU_1797 PF10397 Adenylosuccinate lyase C-terminus KVU_1801 PF04079 Segregation and condensation complex subunit ScpB KVU_1802 PF02616 Segregation and condensation protein ScpA KVU_1803 PF00933 Glycosyl hydrolase family 3 N terminal domain KVU_1805 PF00750 tRNA synthetases class I (R) KVU_1805 PF05746 DALR anticodon binding domain KVU_1805 PF03485 Arginyl tRNA synthetase N terminal domain KVU_1806 PF00270 DEAD/DEAH box helicase KVU_1806 PF03880 DbpA RNA binding domain KVU_1806 PF00271 Helicase conserved C-terminal domain KVU_1808 PF17770 Ribonuclease J C-terminal domain KVU_1808 PF12706 Beta-lactamase superfamily domain KVU_1808 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain KVU_1809 PF02237 Biotin protein ligase C terminal domain KVU_1809 PF03099 Biotin/lipoate A/B protein ligase family KVU_1810 PF00361 Proton-conducting membrane transporter KVU_1811 PF00361 Proton-conducting membrane transporter KVU_1812 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus KVU_1812 PF00361 Proton-conducting membrane transporter KVU_1813 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L KVU_1814 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 KVU_1815 PF12838 4Fe-4S dicluster domain KVU_1816 PF00146 NADH dehydrogenase KVU_1817 PF00384 Molybdopterin oxidoreductase KVU_1817 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region KVU_1817 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal KVU_1819 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region KVU_1819 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit KVU_1819 PF10531 SLBB domain KVU_1823 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit KVU_1824 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit KVU_1825 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit KVU_1826 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 KVU_1827 PF13419 Haloacid dehalogenase-like hydrolase KVU_1828 PF12804 MobA-like NTP transferase domain KVU_1828 PF00132 Bacterial transferase hexapeptide (six repeats) KVU_1833 PF00141 Peroxidase KVU_1834 PF03466 LysR substrate binding domain KVU_1834 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KVU_1835 PF00593 TonB dependent receptor KVU_1835 PF07715 TonB-dependent Receptor Plug Domain KVU_1837 PF03180 NLPA lipoprotein KVU_1838 PF00581 Rhodanese-like domain KVU_1839 PF00005 ABC transporter KVU_1839 PF09383 NIL domain KVU_1840 PF00528 Binding-protein-dependent transport system inner membrane component KVU_1843 PF08267 Cobalamin-independent synthase, N-terminal domain KVU_1843 PF01717 Cobalamin-independent synthase, Catalytic domain KVU_1844 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KVU_1844 PF00005 ABC transporter KVU_1846 PF00528 Binding-protein-dependent transport system inner membrane component KVU_1846 PF12911 N-terminal TM domain of oligopeptide transport permease C KVU_1847 PF00528 Binding-protein-dependent transport system inner membrane component KVU_1855 PF00392 Bacterial regulatory proteins, gntR family KVU_1855 PF07729 FCD domain KVU_1858 PF01370 NAD dependent epimerase/dehydratase family KVU_1859 PF01791 DeoC/LacD family aldolase KVU_1860 PF00171 Aldehyde dehydrogenase family KVU_1862 PF02470 MlaD protein KVU_1863 PF00475 Imidazoleglycerol-phosphate dehydratase KVU_1864 PF00977 Histidine biosynthesis protein KVU_1865 PF00977 Histidine biosynthesis protein KVU_1866 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase KVU_1868 PF00588 SpoU rRNA Methylase family KVU_1868 PF08032 RNA 2'-O ribose methyltransferase substrate binding KVU_1870 PF00892 EamA-like transporter family KVU_1872 PF00296 Luciferase-like monooxygenase KVU_1873 PF00857 Isochorismatase family KVU_1874 PF01042 Endoribonuclease L-PSP KVU_1876 PF12146 Serine aminopeptidase, S33 KVU_1877 PF02472 Biopolymer transport protein ExbD/TolR KVU_1878 PF01618 MotA/TolQ/ExbB proton channel family KVU_1879 PF12804 MobA-like NTP transferase domain KVU_1879 PF14602 Hexapeptide repeat of succinyl-transferase KVU_1879 PF00132 Bacterial transferase hexapeptide (six repeats) KVU_1881 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family KVU_1882 PF05045 Rhamnan synthesis protein F KVU_1882 PF14307 Glycosyltransferase WbsX KVU_1884 PF01156 Inosine-uridine preferring nucleoside hydrolase KVU_1886 PF02653 Branched-chain amino acid transport system / permease component KVU_1887 PF02653 Branched-chain amino acid transport system / permease component KVU_1888 PF12399 Branched-chain amino acid ATP-binding cassette transporter KVU_1888 PF00005 ABC transporter KVU_1889 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KVU_1890 PF00005 ABC transporter KVU_1892 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KVU_1892 PF03459 TOBE domain KVU_1894 PF00528 Binding-protein-dependent transport system inner membrane component KVU_1895 PF00005 ABC transporter KVU_1895 PF03459 TOBE domain KVU_1900 PF00106 short chain dehydrogenase KVU_1902 PF08676 MutL C terminal dimerisation domain KVU_1902 PF01119 DNA mismatch repair protein, C-terminal domain KVU_1903 PF05193 Peptidase M16 inactive domain KVU_1904 PF05193 Peptidase M16 inactive domain KVU_1904 PF00675 Insulinase (Peptidase family M16) KVU_1906 PF01252 Signal peptidase (SPase) II KVU_1907 PF02142 MGS-like domain KVU_1907 PF01808 AICARFT/IMPCHase bienzyme KVU_1909 PF01189 16S rRNA methyltransferase RsmB/F KVU_1909 PF01029 NusB family KVU_1912 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KVU_1913 PF00171 Aldehyde dehydrogenase family KVU_1914 PF00578 AhpC/TSA family KVU_1914 PF10417 C-terminal domain of 1-Cys peroxiredoxin KVU_1915 PF02463 RecF/RecN/SMC N terminal domain KVU_1916 PF02768 DNA polymerase III beta subunit, C-terminal domain KVU_1916 PF00712 DNA polymerase III beta subunit, N-terminal domain KVU_1916 PF02767 DNA polymerase III beta subunit, central domain KVU_1917 PF01649 Ribosomal protein S20 KVU_1918 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain KVU_1918 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain KVU_1919 PF01209 ubiE/COQ5 methyltransferase family KVU_1920 PF13860 FlgD Ig-like domain KVU_1920 PF03963 Flagellar hook capping protein - N-terminal region KVU_1920 PF13861 FlgD Tudor-like domain KVU_1921 PF03109 ABC1 family KVU_1925 PF00669 Bacterial flagellin N-terminal helical region KVU_1925 PF00700 Bacterial flagellin C-terminal helical region KVU_1927 PF07378 Flagellar protein FlbT KVU_1929 PF02874 ATP synthase alpha/beta family, beta-barrel domain KVU_1929 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KVU_1929 PF18269 T3SS EscN ATPase C-terminal domain KVU_1930 PF00460 Flagella basal body rod protein KVU_1931 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KVU_1932 PF02049 Flagellar hook-basal body complex protein FliE KVU_1933 PF01313 Bacterial export proteins, family 3 KVU_1934 PF00460 Flagella basal body rod protein KVU_1934 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KVU_1935 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KVU_1935 PF00460 Flagella basal body rod protein KVU_1937 PF02107 Flagellar L-ring protein KVU_1940 PF01312 FlhB HrpN YscU SpaS Family KVU_1942 PF00771 FHIPEP family KVU_1944 PF01618 MotA/TolQ/ExbB proton channel family KVU_1948 PF08345 Flagellar M-ring protein C-terminal KVU_1948 PF01514 Secretory protein of YscJ/FliF family KVU_1950 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term KVU_1951 PF00813 FliP family KVU_1952 PF02119 Flagellar P-ring protein KVU_1955 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KVU_1955 PF07559 Flagellar basal body protein FlaE KVU_1955 PF00460 Flagella basal body rod protein KVU_1956 PF00691 OmpA family KVU_1956 PF13677 Membrane MotB of proton-channel complex MotA/MotB KVU_1957 PF01493 GXGXG motif KVU_1957 PF04898 Glutamate synthase central domain KVU_1957 PF01645 Conserved region in glutamate synthase KVU_1957 PF00310 Glutamine amidotransferases class-II KVU_1959 PF07992 Pyridine nucleotide-disulphide oxidoreductase KVU_1959 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster KVU_1960 PF02673 Bacitracin resistance protein BacA KVU_1966 PF00471 Ribosomal protein L33 KVU_1969 PF00115 Cytochrome C and Quinol oxidase polypeptide I KVU_1970 PF00768 D-alanyl-D-alanine carboxypeptidase KVU_1970 PF07943 Penicillin-binding protein 5, C-terminal domain KVU_1971 PF02223 Thymidylate kinase KVU_1972 PF09115 DNA polymerase III, delta subunit, C terminal KVU_1973 PF01026 TatD related DNase KVU_1974 PF03099 Biotin/lipoate A/B protein ligase family KVU_1974 PF12706 Beta-lactamase superfamily domain KVU_1984 PF03447 Homoserine dehydrogenase, NAD binding domain KVU_1984 PF01842 ACT domain KVU_1984 PF00742 Homoserine dehydrogenase KVU_1985 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded KVU_1986 PF17768 RecJ OB domain KVU_1986 PF01368 DHH family KVU_1986 PF02272 DHHA1 domain KVU_1987 PF08753 NikR C terminal nickel binding domain KVU_1987 PF01402 Ribbon-helix-helix protein, copG family KVU_1989 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KVU_1990 PF00528 Binding-protein-dependent transport system inner membrane component KVU_1991 PF12911 N-terminal TM domain of oligopeptide transport permease C KVU_1991 PF00528 Binding-protein-dependent transport system inner membrane component KVU_1992 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KVU_1992 PF00005 ABC transporter KVU_1994 PF03738 Glutathionylspermidine synthase preATP-grasp KVU_1995 PF06693 Protein of unknown function (DUF1190) KVU_1996 PF04055 Radical SAM superfamily KVU_1996 PF12544 Lysine-2,3-aminomutase KVU_1998 PF13505 Outer membrane protein beta-barrel domain KVU_1999 PF00009 Elongation factor Tu GTP binding domain KVU_2000 PF01507 Phosphoadenosine phosphosulfate reductase family KVU_2001 PF13580 SIS domain KVU_2003 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase KVU_2004 PF00528 Binding-protein-dependent transport system inner membrane component KVU_2005 PF00528 Binding-protein-dependent transport system inner membrane component KVU_2007 PF08402 TOBE domain KVU_2007 PF00005 ABC transporter KVU_2009 PF07702 UTRA domain KVU_2009 PF00392 Bacterial regulatory proteins, gntR family KVU_2014 PF08548 Peptidase M10 serralysin C terminal KVU_2014 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) KVU_2017 PF00005 ABC transporter KVU_2023 PF01613 Flavin reductase like domain KVU_2024 PF01266 FAD dependent oxidoreductase KVU_2024 PF05430 S-adenosyl-L-methionine-dependent methyltransferase KVU_2026 PF01062 Bestrophin, RFP-TM, chloride channel KVU_2027 PF04055 Radical SAM superfamily KVU_2027 PF13186 Iron-sulfur cluster-binding domain KVU_2028 PF12706 Beta-lactamase superfamily domain KVU_2029 PF08042 PqqA family KVU_2033 PF07859 alpha/beta hydrolase fold KVU_2034 PF00743 Flavin-binding monooxygenase-like KVU_2038 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component KVU_2039 PF03746 LamB/YcsF family KVU_2041 PF02626 Carboxyltransferase domain, subdomain A and B KVU_2043 PF00672 HAMP domain KVU_2043 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KVU_2043 PF00512 His Kinase A (phospho-acceptor) domain KVU_2044 PF00486 Transcriptional regulatory protein, C terminal KVU_2044 PF00072 Response regulator receiver domain KVU_2048 PF00557 Metallopeptidase family M24 KVU_2049 PF04304 Protein of unknown function (DUF454) KVU_2050 PF01638 HxlR-like helix-turn-helix KVU_2051 PF00106 short chain dehydrogenase KVU_2053 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain KVU_2053 PF02805 Metal binding domain of Ada KVU_2053 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain KVU_2053 PF12833 Helix-turn-helix domain KVU_2054 PF01047 MarR family KVU_2056 PF00468 Ribosomal protein L34 KVU_2057 PF00825 Ribonuclease P KVU_2058 PF01809 Putative membrane protein insertion efficiency factor KVU_2059 PF01171 PP-loop family KVU_2060 PF14849 YidC periplasmic domain KVU_2060 PF02096 60Kd inner membrane protein KVU_2062 PF01926 50S ribosome-binding GTPase KVU_2063 PF00696 Amino acid kinase family KVU_2064 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KVU_2064 PF03466 LysR substrate binding domain KVU_2065 PF00005 ABC transporter KVU_2066 PF01810 LysE type translocator KVU_2067 PF00528 Binding-protein-dependent transport system inner membrane component KVU_2068 PF00528 Binding-protein-dependent transport system inner membrane component KVU_2069 PF00497 Bacterial extracellular solute-binding proteins, family 3 KVU_2071 PF13419 Haloacid dehalogenase-like hydrolase KVU_2072 PF00849 RNA pseudouridylate synthase KVU_2072 PF01479 S4 domain KVU_2073 PF02537 CrcB-like protein, Camphor Resistance (CrcB) KVU_2074 PF00004 ATPase family associated with various cellular activities (AAA) KVU_2074 PF16193 AAA C-terminal domain KVU_2074 PF12002 MgsA AAA+ ATPase C terminal KVU_2078 PF01196 Ribosomal protein L17 KVU_2079 PF01000 RNA polymerase Rpb3/RpoA insert domain KVU_2079 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain KVU_2079 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain KVU_2080 PF00411 Ribosomal protein S11 KVU_2081 PF00416 Ribosomal protein S13/S18 KVU_2082 PF05191 Adenylate kinase, active site lid KVU_2083 PF00344 SecY translocase KVU_2084 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A KVU_2085 PF00327 Ribosomal protein L30p/L7e KVU_2086 PF03719 Ribosomal protein S5, C-terminal domain KVU_2086 PF00333 Ribosomal protein S5, N-terminal domain KVU_2087 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast KVU_2088 PF00347 Ribosomal protein L6 KVU_2089 PF00410 Ribosomal protein S8 KVU_2090 PF00253 Ribosomal protein S14p/S29e KVU_2091 PF00281 Ribosomal protein L5 KVU_2091 PF00673 ribosomal L5P family C-terminus KVU_2092 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 KVU_2092 PF00467 KOW motif KVU_2093 PF00238 Ribosomal protein L14p/L23e KVU_2094 PF00366 Ribosomal protein S17 KVU_2095 PF00831 Ribosomal L29 protein KVU_2096 PF00252 Ribosomal protein L16p/L10e KVU_2097 PF00189 Ribosomal protein S3, C-terminal domain KVU_2097 PF07650 KH domain KVU_2098 PF00237 Ribosomal protein L22p/L17e KVU_2099 PF00203 Ribosomal protein S19 KVU_2100 PF03947 Ribosomal Proteins L2, C-terminal domain KVU_2100 PF00181 Ribosomal Proteins L2, RNA binding domain KVU_2101 PF00276 Ribosomal protein L23 KVU_2102 PF00573 Ribosomal protein L4/L1 family KVU_2103 PF00297 Ribosomal protein L3 KVU_2104 PF00338 Ribosomal protein S10p/S20e KVU_2105 PF03143 Elongation factor Tu C-terminal domain KVU_2105 PF03144 Elongation factor Tu domain 2 KVU_2105 PF00009 Elongation factor Tu GTP binding domain KVU_2106 PF03144 Elongation factor Tu domain 2 KVU_2106 PF00009 Elongation factor Tu GTP binding domain KVU_2106 PF03764 Elongation factor G, domain IV KVU_2106 PF00679 Elongation factor G C-terminus KVU_2106 PF14492 Elongation Factor G, domain II KVU_2107 PF00177 Ribosomal protein S7p/S5e KVU_2108 PF00164 Ribosomal protein S12/S23 KVU_2109 PF00892 EamA-like transporter family KVU_2111 PF04997 RNA polymerase Rpb1, domain 1 KVU_2111 PF00623 RNA polymerase Rpb1, domain 2 KVU_2111 PF04998 RNA polymerase Rpb1, domain 5 KVU_2111 PF05000 RNA polymerase Rpb1, domain 4 KVU_2111 PF04983 RNA polymerase Rpb1, domain 3 KVU_2112 PF04563 RNA polymerase beta subunit KVU_2112 PF00562 RNA polymerase Rpb2, domain 6 KVU_2112 PF04560 RNA polymerase Rpb2, domain 7 KVU_2112 PF10385 RNA polymerase beta subunit external 1 domain KVU_2112 PF04565 RNA polymerase Rpb2, domain 3 KVU_2112 PF04561 RNA polymerase Rpb2, domain 2 KVU_2113 PF00542 Ribosomal protein L7/L12 C-terminal domain KVU_2113 PF16320 Ribosomal protein L7/L12 dimerisation domain KVU_2114 PF00466 Ribosomal protein L10 KVU_2115 PF00687 Ribosomal protein L1p/L10e family KVU_2116 PF00298 Ribosomal protein L11, RNA binding domain KVU_2116 PF03946 Ribosomal protein L11, N-terminal domain KVU_2117 PF02357 Transcription termination factor nusG KVU_2117 PF00467 KOW motif KVU_2118 PF00584 SecE/Sec61-gamma subunits of protein translocation complex KVU_2122 PF00009 Elongation factor Tu GTP binding domain KVU_2122 PF03144 Elongation factor Tu domain 2 KVU_2122 PF03143 Elongation factor Tu C-terminal domain KVU_2123 PF00521 DNA gyrase/topoisomerase IV, subunit A KVU_2123 PF03989 DNA gyrase C-terminal domain, beta-propeller KVU_2125 PF01923 Cobalamin adenosyltransferase KVU_2126 PF06415 BPG-independent PGAM N-terminus (iPGM_N) KVU_2126 PF01676 Metalloenzyme superfamily KVU_2128 PF13180 PDZ domain KVU_2128 PF03572 Peptidase family S41 KVU_2129 PF00293 NUDIX domain KVU_2130 PF00575 S1 RNA binding domain KVU_2130 PF08461 Ribonuclease R winged-helix domain KVU_2130 PF17876 Cold shock domain KVU_2130 PF08206 Ribonuclease B OB domain KVU_2130 PF00773 RNB domain KVU_2132 PF13406 Transglycosylase SLT domain KVU_2133 PF01546 Peptidase family M20/M25/M40 KVU_2133 PF07687 Peptidase dimerisation domain KVU_2136 PF14602 Hexapeptide repeat of succinyl-transferase KVU_2136 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal KVU_2136 PF00132 Bacterial transferase hexapeptide (six repeats) KVU_2138 PF04055 Radical SAM superfamily KVU_2147 PF17863 AAA lid domain KVU_2147 PF07726 ATPase family associated with various cellular activities (AAA) KVU_2149 PF00005 ABC transporter KVU_2152 PF02073 Thermophilic metalloprotease (M29) KVU_2153 PF07690 Major Facilitator Superfamily KVU_2155 PF00950 ABC 3 transport family KVU_2156 PF00950 ABC 3 transport family KVU_2157 PF00005 ABC transporter KVU_2158 PF01297 Zinc-uptake complex component A periplasmic KVU_2162 PF00005 ABC transporter KVU_2162 PF08402 TOBE domain KVU_2163 PF00528 Binding-protein-dependent transport system inner membrane component KVU_2164 PF00528 Binding-protein-dependent transport system inner membrane component KVU_2165 PF13416 Bacterial extracellular solute-binding protein KVU_2166 PF03009 Glycerophosphoryl diester phosphodiesterase family KVU_2169 PF03741 Integral membrane protein TerC family KVU_2169 PF03471 Transporter associated domain KVU_2170 PF00583 Acetyltransferase (GNAT) family KVU_2171 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase KVU_2172 PF16363 GDP-mannose 4,6 dehydratase KVU_2174 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KVU_2175 PF00528 Binding-protein-dependent transport system inner membrane component KVU_2176 PF00528 Binding-protein-dependent transport system inner membrane component KVU_2176 PF12911 N-terminal TM domain of oligopeptide transport permease C KVU_2177 PF00005 ABC transporter KVU_2177 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KVU_2178 PF00296 Luciferase-like monooxygenase KVU_2182 PF00814 Glycoprotease family KVU_2183 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus KVU_2183 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus KVU_2184 PF03795 YCII-related domain KVU_2186 PF00570 HRDC domain KVU_2186 PF01612 3'-5' exonuclease KVU_2189 PF00005 ABC transporter KVU_2190 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus KVU_2190 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein KVU_2192 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 KVU_2193 PF01554 MatE KVU_2194 PF00834 Ribulose-phosphate 3 epimerase family KVU_2198 PF00483 Nucleotidyl transferase KVU_2199 PF02348 Cytidylyltransferase KVU_2200 PF00459 Inositol monophosphatase family KVU_2204 PF04002 RadC-like JAB domain KVU_2205 PF07516 SecA Wing and Scaffold domain KVU_2205 PF01043 SecA preprotein cross-linking domain KVU_2205 PF07517 SecA DEAD-like domain KVU_2205 PF02810 SEC-C motif KVU_2207 PF01960 ArgJ family KVU_2208 PF00293 NUDIX domain KVU_2209 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KVU_2210 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component KVU_2212 PF03480 Bacterial extracellular solute-binding protein, family 7 KVU_2212 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component KVU_2213 PF01717 Cobalamin-independent synthase, Catalytic domain KVU_2214 PF08364 Bacterial translation initiation factor IF-2 associated region KVU_2214 PF00009 Elongation factor Tu GTP binding domain KVU_2214 PF04760 Translation initiation factor IF-2, N-terminal region KVU_2214 PF11987 Translation-initiation factor 2 KVU_2216 PF13184 NusA-like KH domain KVU_2216 PF08529 NusA N-terminal domain KVU_2216 PF00575 S1 RNA binding domain KVU_2217 PF17384 RimP C-terminal SH3 domain KVU_2217 PF02576 RimP N-terminal domain KVU_2219 PF00561 alpha/beta hydrolase fold KVU_2222 PF00795 Carbon-nitrogen hydrolase KVU_2223 PF00462 Glutaredoxin KVU_2224 PF00156 Phosphoribosyl transferase domain KVU_2226 PF00762 Ferrochelatase KVU_2227 PF03734 L,D-transpeptidase catalytic domain KVU_2229 PF03734 L,D-transpeptidase catalytic domain KVU_2230 PF05958 tRNA (Uracil-5-)-methyltransferase KVU_2231 PF01743 Poly A polymerase head domain KVU_2231 PF12627 Probable RNA and SrmB- binding site of polymerase A KVU_2231 PF13735 tRNA nucleotidyltransferase domain 2 putative KVU_2232 PF01430 Hsp33 protein KVU_2233 PF00293 NUDIX domain KVU_2235 PF00585 C-terminal regulatory domain of Threonine dehydratase KVU_2235 PF00291 Pyridoxal-phosphate dependent enzyme KVU_2236 PF00764 Arginosuccinate synthase KVU_2238 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) KVU_2238 PF00294 pfkB family carbohydrate kinase KVU_2239 PF01025 GrpE KVU_2240 PF01628 HrcA protein C terminal domain KVU_2242 PF01725 Ham1 family KVU_2243 PF02195 ParB-like nuclease domain KVU_2243 PF17762 HTH domain found in ParB protein KVU_2244 PF06969 HemN C-terminal domain KVU_2244 PF04055 Radical SAM superfamily KVU_2245 PF13614 AAA domain KVU_2246 PF02527 rRNA small subunit methyltransferase G KVU_2247 PF13932 GidA associated domain KVU_2247 PF01134 Glucose inhibited division protein A KVU_2248 PF10396 GTP-binding protein TrmE N-terminus KVU_2248 PF12631 MnmE helical domain KVU_2248 PF01926 50S ribosome-binding GTPase KVU_2249 PF07497 Rho termination factor, RNA-binding domain KVU_2249 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KVU_2249 PF07498 Rho termination factor, N-terminal domain KVU_2250 PF01121 Dephospho-CoA kinase KVU_2251 PF00929 Exonuclease KVU_2252 PF02556 Preprotein translocase subunit SecB KVU_2257 PF07724 AAA domain (Cdc48 subfamily) KVU_2257 PF00004 ATPase family associated with various cellular activities (AAA) KVU_2258 PF00227 Proteasome subunit KVU_2259 PF01156 Inosine-uridine preferring nucleoside hydrolase KVU_2260 PF00085 Thioredoxin KVU_2261 PF12705 PD-(D/E)XK nuclease superfamily KVU_2261 PF13361 UvrD-like helicase C-terminal domain KVU_2261 PF00580 UvrD/REP helicase N-terminal domain KVU_2262 PF12705 PD-(D/E)XK nuclease superfamily KVU_2263 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE KVU_2265 PF00512 His Kinase A (phospho-acceptor) domain KVU_2265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KVU_2266 PF01966 HD domain KVU_2267 PF00072 Response regulator receiver domain KVU_2273 PF01063 Amino-transferase class IV KVU_2274 PF12802 MarR family KVU_2275 PF00072 Response regulator receiver domain KVU_2275 PF00486 Transcriptional regulatory protein, C terminal KVU_2276 PF01494 FAD binding domain KVU_2278 PF01425 Amidase KVU_2279 PF00155 Aminotransferase class I and II KVU_2280 PF01580 FtsK/SpoIIIE family KVU_2280 PF09397 Ftsk gamma domain KVU_2280 PF13491 4TM region of DNA translocase FtsK/SpoIIIE KVU_2280 PF17854 FtsK alpha domain KVU_2286 PF00005 ABC transporter KVU_2286 PF17912 MalK OB fold domain KVU_2288 PF00528 Binding-protein-dependent transport system inner membrane component KVU_2289 PF00149 Calcineurin-like phosphoesterase KVU_2290 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family KVU_2290 PF00356 Bacterial regulatory proteins, lacI family KVU_2294 PF14815 NUDIX domain KVU_2294 PF00730 HhH-GPD superfamily base excision DNA repair protein KVU_2296 PF01351 Ribonuclease HII KVU_2297 PF18755 Restriction Enzyme Adenine Methylase Associated KVU_2297 PF01555 DNA methylase KVU_2298 PF02606 Tetraacyldisaccharide-1-P 4'-kinase KVU_2299 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) KVU_2300 PF01523 Putative modulator of DNA gyrase KVU_2303 PF06082 Exopolysaccharide biosynthesis protein YbjH KVU_2308 PF00133 tRNA synthetases class I (I, L, M and V) KVU_2308 PF13603 Leucyl-tRNA synthetase, Domain 2 KVU_2308 PF08264 Anticodon-binding domain of tRNA KVU_2308 PF09334 tRNA synthetases class I (M) KVU_2311 PF01168 Alanine racemase, N-terminal domain KVU_2313 PF00486 Transcriptional regulatory protein, C terminal KVU_2313 PF00072 Response regulator receiver domain KVU_2315 PF01323 DSBA-like thioredoxin domain KVU_2317 PF00355 Rieske [2Fe-2S] domain KVU_2317 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal KVU_2318 PF00005 ABC transporter KVU_2319 PF00528 Binding-protein-dependent transport system inner membrane component KVU_2323 PF01048 Phosphorylase superfamily KVU_2323 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus KVU_2324 PF13382 Adenine deaminase C-terminal domain KVU_2324 PF01979 Amidohydrolase family KVU_2325 PF00849 RNA pseudouridylate synthase KVU_2327 PF02033 Ribosome-binding factor A KVU_2329 PF16198 tRNA pseudouridylate synthase B C-terminal domain KVU_2329 PF01509 TruB family pseudouridylate synthase (N terminal domain) KVU_2331 PF00312 Ribosomal protein S15 KVU_2332 PF01138 3' exoribonuclease family, domain 1 KVU_2332 PF00013 KH domain KVU_2332 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain KVU_2332 PF03725 3' exoribonuclease family, domain 2 KVU_2332 PF00575 S1 RNA binding domain KVU_2334 PF01751 Toprim domain KVU_2334 PF00986 DNA gyrase B subunit, carboxyl terminus KVU_2334 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KVU_2334 PF00204 DNA gyrase B KVU_2337 PF00581 Rhodanese-like domain KVU_2337 PF17773 UPF0176 acylphosphatase like domain KVU_2338 PF00857 Isochorismatase family KVU_2339 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family KVU_2339 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain KVU_2340 PF00472 RF-1 domain KVU_2343 PF03411 Penicillin-insensitive murein endopeptidase KVU_2345 PF00270 DEAD/DEAH box helicase KVU_2345 PF09382 RQC domain KVU_2345 PF16124 RecQ zinc-binding KVU_2345 PF00570 HRDC domain KVU_2345 PF00271 Helicase conserved C-terminal domain KVU_2346 PF03883 Peroxide stress protein YaaA KVU_2347 PF01925 Sulfite exporter TauE/SafE KVU_2348 PF00664 ABC transporter transmembrane region KVU_2348 PF00005 ABC transporter KVU_2350 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KVU_2350 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KVU_2351 PF05368 NmrA-like family KVU_2352 PF01979 Amidohydrolase family KVU_2353 PF01638 HxlR-like helix-turn-helix KVU_2355 PF03741 Integral membrane protein TerC family KVU_2355 PF03471 Transporter associated domain KVU_2358 PF01842 ACT domain KVU_2358 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KVU_2358 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KVU_2359 PF11799 impB/mucB/samB family C-terminal domain KVU_2359 PF00817 impB/mucB/samB family KVU_2360 PF06906 Protein of unknown function (DUF1272) KVU_2361 PF01145 SPFH domain / Band 7 family KVU_2362 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family KVU_2364 PF02861 Clp amino terminal domain, pathogenicity island component KVU_2364 PF17871 AAA lid domain KVU_2364 PF10431 C-terminal, D2-small domain, of ClpB protein KVU_2364 PF00004 ATPase family associated with various cellular activities (AAA) KVU_2364 PF07724 AAA domain (Cdc48 subfamily) KVU_2365 PF00174 Oxidoreductase molybdopterin binding domain KVU_2366 PF01794 Ferric reductase like transmembrane component KVU_2369 PF05045 Rhamnan synthesis protein F KVU_2371 PF00005 ABC transporter KVU_2371 PF00664 ABC transporter transmembrane region KVU_2372 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KVU_2372 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KVU_2372 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KVU_2372 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KVU_2374 PF01050 Mannose-6-phosphate isomerase KVU_2374 PF00483 Nucleotidyl transferase KVU_2375 PF08501 Shikimate dehydrogenase substrate binding domain KVU_2375 PF18317 Shikimate 5'-dehydrogenase C-terminal domain KVU_2376 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KVU_2376 PF01261 Xylose isomerase-like TIM barrel KVU_2377 PF00392 Bacterial regulatory proteins, gntR family KVU_2377 PF07729 FCD domain KVU_2378 PF00392 Bacterial regulatory proteins, gntR family KVU_2378 PF07729 FCD domain KVU_2379 PF03480 Bacterial extracellular solute-binding protein, family 7 KVU_2381 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component KVU_2382 PF01220 Dehydroquinase class II KVU_2383 PF08450 SMP-30/Gluconolactonase/LRE-like region KVU_2384 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KVU_2384 PF03466 LysR substrate binding domain KVU_2385 PF03480 Bacterial extracellular solute-binding protein, family 7 KVU_2387 PF00245 Alkaline phosphatase KVU_2391 PF07726 ATPase family associated with various cellular activities (AAA) KVU_2391 PF17863 AAA lid domain KVU_2393 PF00753 Metallo-beta-lactamase superfamily KVU_2394 PF02492 CobW/HypB/UreG, nucleotide-binding domain KVU_2394 PF07683 Cobalamin synthesis protein cobW C-terminal domain KVU_2400 PF00005 ABC transporter KVU_2401 PF03649 Uncharacterised protein family (UPF0014) KVU_2402 PF00483 Nucleotidyl transferase KVU_2403 PF04321 RmlD substrate binding domain KVU_2405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KVU_2405 PF03466 LysR substrate binding domain KVU_2406 PF13454 FAD-NAD(P)-binding KVU_2408 PF02633 Creatinine amidohydrolase KVU_2409 PF08402 TOBE domain KVU_2409 PF00005 ABC transporter KVU_2412 PF00528 Binding-protein-dependent transport system inner membrane component KVU_2413 PF00581 Rhodanese-like domain KVU_2414 PF04143 Sulphur transport KVU_2415 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase KVU_2416 PF00111 2Fe-2S iron-sulfur cluster binding domain KVU_2416 PF01799 [2Fe-2S] binding domain KVU_2417 PF01883 Iron-sulfur cluster assembly protein KVU_2417 PF10609 NUBPL iron-transfer P-loop NTPase KVU_2418 PF02310 B12 binding domain KVU_2418 PF00809 Pterin binding enzyme KVU_2418 PF02574 Homocysteine S-methyltransferase KVU_2418 PF02965 Vitamin B12 dependent methionine synthase, activation domain KVU_2418 PF02607 B12 binding domain KVU_2420 PF00270 DEAD/DEAH box helicase KVU_2420 PF00271 Helicase conserved C-terminal domain KVU_2422 PF02694 Uncharacterised BCR, YnfA/UPF0060 family KVU_2423 PF01197 Ribosomal protein L31 KVU_2424 PF01245 Ribosomal protein L19 KVU_2425 PF01746 tRNA (Guanine-1)-methyltransferase KVU_2426 PF05239 PRC-barrel domain KVU_2426 PF01782 RimM N-terminal domain KVU_2427 PF00886 Ribosomal protein S16 KVU_2431 PF02881 SRP54-type protein, helical bundle domain KVU_2431 PF00448 SRP54-type protein, GTPase domain KVU_2431 PF02978 Signal peptide binding domain KVU_2432 PF01022 Bacterial regulatory protein, arsR family KVU_2433 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KVU_2433 PF03466 LysR substrate binding domain KVU_2434 PF09527 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter KVU_2435 PF00119 ATP synthase A chain KVU_2436 PF00137 ATP synthase subunit C KVU_2437 PF00430 ATP synthase B/B' CF(0) KVU_2438 PF00430 ATP synthase B/B' CF(0) KVU_2439 PF07729 FCD domain KVU_2439 PF00392 Bacterial regulatory proteins, gntR family KVU_2440 PF04972 BON domain KVU_2440 PF00691 OmpA family KVU_2441 PF02805 Metal binding domain of Ada KVU_2441 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain KVU_2441 PF12833 Helix-turn-helix domain KVU_2441 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain KVU_2442 PF10576 Iron-sulfur binding domain of endonuclease III KVU_2442 PF00730 HhH-GPD superfamily base excision DNA repair protein KVU_2442 PF00633 Helix-hairpin-helix motif KVU_2443 PF00291 Pyridoxal-phosphate dependent enzyme KVU_2445 PF02801 Beta-ketoacyl synthase, C-terminal domain KVU_2445 PF00109 Beta-ketoacyl synthase, N-terminal domain KVU_2446 PF07977 FabA-like domain KVU_2449 PF00793 DAHP synthetase I family KVU_2451 PF00005 ABC transporter KVU_2452 PF07992 Pyridine nucleotide-disulphide oxidoreductase KVU_2452 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KVU_2454 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KVU_2454 PF02817 e3 binding domain KVU_2454 PF00364 Biotin-requiring enzyme KVU_2455 PF00676 Dehydrogenase E1 component KVU_2455 PF16078 2-oxoglutarate dehydrogenase N-terminus KVU_2455 PF02779 Transketolase, pyrimidine binding domain KVU_2455 PF16870 2-oxoglutarate dehydrogenase C-terminal KVU_2456 PF00549 CoA-ligase KVU_2456 PF02629 CoA binding domain KVU_2457 PF00549 CoA-ligase KVU_2457 PF08442 ATP-grasp domain KVU_2458 PF00056 lactate/malate dehydrogenase, NAD binding domain KVU_2458 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain KVU_2460 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit KVU_2462 PF02910 Fumarate reductase flavoprotein C-term KVU_2462 PF00890 FAD binding domain KVU_2470 PF00392 Bacterial regulatory proteins, gntR family KVU_2470 PF07702 UTRA domain KVU_2472 PF00933 Glycosyl hydrolase family 3 N terminal domain KVU_2473 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KVU_2474 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KVU_2475 PF00756 Putative esterase KVU_2476 PF00107 Zinc-binding dehydrogenase KVU_2476 PF08240 Alcohol dehydrogenase GroES-like domain KVU_2477 PF02583 Metal-sensitive transcriptional repressor KVU_2478 PF00440 Bacterial regulatory proteins, tetR family KVU_2478 PF16925 Tetracyclin repressor-like, C-terminal domain KVU_2479 PF02566 OsmC-like protein KVU_2480 PF00107 Zinc-binding dehydrogenase KVU_2480 PF08240 Alcohol dehydrogenase GroES-like domain KVU_2484 PF01070 FMN-dependent dehydrogenase KVU_2485 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KVU_2485 PF00005 ABC transporter KVU_2486 PF00005 ABC transporter KVU_2486 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KVU_2487 PF00528 Binding-protein-dependent transport system inner membrane component KVU_2487 PF12911 N-terminal TM domain of oligopeptide transport permease C KVU_2488 PF00528 Binding-protein-dependent transport system inner membrane component KVU_2490 PF01266 FAD dependent oxidoreductase KVU_2491 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KVU_2492 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KVU_2492 PF03466 LysR substrate binding domain KVU_2493 PF07729 FCD domain KVU_2493 PF00392 Bacterial regulatory proteins, gntR family KVU_2494 PF00528 Binding-protein-dependent transport system inner membrane component KVU_2495 PF00528 Binding-protein-dependent transport system inner membrane component KVU_2496 PF00005 ABC transporter KVU_2497 PF00497 Bacterial extracellular solute-binding proteins, family 3 KVU_2498 PF08240 Alcohol dehydrogenase GroES-like domain KVU_2498 PF00107 Zinc-binding dehydrogenase KVU_2500 PF01678 Diaminopimelate epimerase KVU_2501 PF00919 Uncharacterized protein family UPF0004 KVU_2501 PF04055 Radical SAM superfamily KVU_2502 PF07690 Major Facilitator Superfamily KVU_2503 PF02779 Transketolase, pyrimidine binding domain KVU_2503 PF02780 Transketolase, C-terminal domain KVU_2503 PF13292 1-deoxy-D-xylulose-5-phosphate synthase KVU_2504 PF00348 Polyprenyl synthetase KVU_2505 PF02609 Exonuclease VII small subunit KVU_2506 PF03966 Trm112p-like protein KVU_2507 PF00563 EAL domain KVU_2507 PF00990 Diguanylate cyclase, GGDEF domain KVU_2507 PF03707 Bacterial signalling protein N terminal repeat KVU_2508 PF02630 SCO1/SenC KVU_2511 PF00034 Cytochrome c KVU_2511 PF03150 Di-haem cytochrome c peroxidase KVU_2515 PF00034 Cytochrome c KVU_2515 PF13442 Cytochrome C oxidase, cbb3-type, subunit III KVU_2517 PF02896 PEP-utilising enzyme, TIM barrel domain KVU_2517 PF00391 PEP-utilising enzyme, mobile domain KVU_2517 PF05524 PEP-utilising enzyme, N-terminal KVU_2518 PF01842 ACT domain KVU_2518 PF13840 ACT domain KVU_2518 PF00696 Amino acid kinase family KVU_2521 PF02321 Outer membrane efflux protein KVU_2526 PF00873 AcrB/AcrD/AcrF family KVU_2527 PF00529 HlyD membrane-fusion protein of T1SS KVU_2527 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KVU_2528 PF00664 ABC transporter transmembrane region KVU_2528 PF00005 ABC transporter KVU_2530 PF08173 Membrane bound YbgT-like protein KVU_2531 PF02322 Cytochrome bd terminal oxidase subunit II KVU_2532 PF01654 Cytochrome bd terminal oxidase subunit I KVU_2533 PF00664 ABC transporter transmembrane region KVU_2533 PF00005 ABC transporter KVU_2534 PF00005 ABC transporter KVU_2534 PF00664 ABC transporter transmembrane region KVU_2536 PF07690 Major Facilitator Superfamily KVU_2538 PF00376 MerR family regulatory protein KVU_2538 PF09278 MerR, DNA binding KVU_2542 PF05430 S-adenosyl-L-methionine-dependent methyltransferase KVU_2542 PF01266 FAD dependent oxidoreductase KVU_2543 PF00994 Probable molybdopterin binding domain KVU_2544 PF05430 S-adenosyl-L-methionine-dependent methyltransferase KVU_2544 PF01266 FAD dependent oxidoreductase KVU_2545 PF03167 Uracil DNA glycosylase superfamily KVU_2546 PF01063 Amino-transferase class IV KVU_2550 PF02887 Pyruvate kinase, alpha/beta domain KVU_2550 PF00224 Pyruvate kinase, barrel domain KVU_2552 PF01632 Ribosomal protein L35 KVU_2553 PF00453 Ribosomal protein L20 KVU_2554 PF01409 tRNA synthetases class II core domain (F) KVU_2554 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain KVU_2555 PF03147 Ferredoxin-fold anticodon binding domain KVU_2555 PF03484 tRNA synthetase B5 domain KVU_2555 PF01588 Putative tRNA binding domain KVU_2555 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain KVU_2555 PF03483 B3/4 domain KVU_2556 PF02798 Glutathione S-transferase, N-terminal domain KVU_2556 PF00043 Glutathione S-transferase, C-terminal domain KVU_2557 PF01741 Large-conductance mechanosensitive channel, MscL KVU_2558 PF01037 Lrp/AsnC ligand binding domain KVU_2563 PF00381 PTS HPr component phosphorylation site KVU_2565 PF03668 P-loop ATPase protein family KVU_2566 PF02603 HPr Serine kinase N terminus KVU_2566 PF07475 HPr Serine kinase C-terminal domain KVU_2567 PF01293 Phosphoenolpyruvate carboxykinase KVU_2569 PF00445 Ribonuclease T2 family KVU_2571 PF13632 Glycosyl transferase family group 2 KVU_2573 PF04349 Periplasmic glucan biosynthesis protein, MdoG KVU_2575 PF00152 tRNA synthetases class II (D, K and N) KVU_2575 PF02938 GAD domain KVU_2575 PF01336 OB-fold nucleic acid binding domain KVU_2577 PF00881 Nitroreductase family KVU_2578 PF02594 Uncharacterised ACR, YggU family COG1872 KVU_2580 PF00919 Uncharacterized protein family UPF0004 KVU_2580 PF04055 Radical SAM superfamily KVU_2580 PF18693 TRAM domain KVU_2581 PF03023 Lipid II flippase MurJ KVU_2582 PF08335 GlnD PII-uridylyltransferase KVU_2582 PF01966 HD domain KVU_2583 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KVU_2584 PF02021 Uncharacterised protein family UPF0102 KVU_2585 PF13335 Magnesium chelatase, subunit ChlI C-terminal KVU_2585 PF01078 Magnesium chelatase, subunit ChlI KVU_2586 PF02951 Prokaryotic glutathione synthetase, N-terminal domain KVU_2586 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain KVU_2588 PF01432 Peptidase family M3 KVU_2589 PF00899 ThiF family KVU_2590 PF01545 Cation efflux family KVU_2590 PF16916 Dimerisation domain of Zinc Transporter KVU_2592 PF02608 ABC transporter substrate-binding protein PnrA-like KVU_2593 PF02653 Branched-chain amino acid transport system / permease component KVU_2594 PF02653 Branched-chain amino acid transport system / permease component KVU_2595 PF00005 ABC transporter KVU_PA0030 PF14579 Helix-hairpin-helix motif KVU_PA0030 PF01336 OB-fold nucleic acid binding domain KVU_PA0030 PF17657 Bacterial DNA polymerase III alpha subunit finger domain KVU_PA0030 PF07733 Bacterial DNA polymerase III alpha NTPase domain KVU_PA0030 PF02811 PHP domain KVU_PA0031 PF17657 Bacterial DNA polymerase III alpha subunit finger domain KVU_PA0031 PF07733 Bacterial DNA polymerase III alpha NTPase domain KVU_PA0031 PF14579 Helix-hairpin-helix motif KVU_PA0031 PF02811 PHP domain KVU_PA0031 PF01336 OB-fold nucleic acid binding domain KVU_PA0044 PF00005 ABC transporter KVU_PA0146 PF01066 CDP-alcohol phosphatidyltransferase KVU_PB0016 PF02811 PHP domain KVU_PB0016 PF17657 Bacterial DNA polymerase III alpha subunit finger domain KVU_PB0016 PF14579 Helix-hairpin-helix motif KVU_PB0016 PF01336 OB-fold nucleic acid binding domain KVU_PB0016 PF07733 Bacterial DNA polymerase III alpha NTPase domain KVU_PB0052 PF00557 Metallopeptidase family M24 KVU_PB0063 PF00905 Penicillin binding protein transpeptidase domain KVU_PB0063 PF00912 Transglycosylase KVU_PB0068 PF03073 TspO/MBR family KVU_PB0074 PF00528 Binding-protein-dependent transport system inner membrane component KVU_PB0080 PF00005 ABC transporter KVU_PB0080 PF17912 MalK OB fold domain KVU_PB0080 PF03459 TOBE domain KVU_PB0176 PF02538 Hydantoinase B/oxoprolinase