##gff-version 3 #!gff-spec-version 1.21 #!processor NCBI annotwriter #!genome-build ASM2794521v1 #!genome-build-accession NCBI_Assembly:GCF_027945215.1 #!annotation-date 01/24/2023 19:12:08 #!annotation-source NCBI RefSeq ##sequence-region NZ_CP116214.1 1 5961931 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1134687 NZ_CP116214.1 RefSeq region 1 5961931 . + . ID=NZ_CP116214.1:1..5961931;Dbxref=taxon:1134687;Is_circular=true;Name=ANONYMOUS;collection-date=2018;country=China: Hangzhou;gbkey=Src;genome=chromosome;isolation-source=sputum;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2563 NZ_CP116214.1 RefSeq gene 1 1401 . + . ID=gene-PHA56_RS00005;Name=dnaA;gbkey=Gene;gene=dnaA;gene_biotype=protein_coding;locus_tag=PHA56_RS00005;old_locus_tag=PHA56_00005 NZ_CP116214.1 Protein Homology CDS 1 1401 . + 0 ID=cds-WP_004871826.1;Parent=gene-PHA56_RS00005;Dbxref=Genbank:WP_004871826.1;Name=WP_004871826.1;Ontology_term=GO:0006270,GO:0006275,GO:0003677,GO:0003688,GO:0005524;gbkey=CDS;gene=dnaA;go_function=DNA binding|0003677||IEA,DNA replication origin binding|0003688||IEA,ATP binding|0005524||IEA;go_process=DNA replication initiation|0006270||IEA,regulation of DNA replication|0006275||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229578.1;locus_tag=PHA56_RS00005;product=chromosomal replication initiator protein DnaA;protein_id=WP_004871826.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1406 2506 . + . ID=gene-PHA56_RS00010;Name=dnaN;gbkey=Gene;gene=dnaN;gene_biotype=protein_coding;locus_tag=PHA56_RS00010;old_locus_tag=PHA56_00010 NZ_CP116214.1 Protein Homology CDS 1406 2506 . + 0 ID=cds-WP_004107206.1;Parent=gene-PHA56_RS00010;Dbxref=Genbank:WP_004107206.1;Name=WP_004107206.1;Ontology_term=GO:0006260,GO:0003887,GO:0009360;gbkey=CDS;gene=dnaN;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006177590.1;locus_tag=PHA56_RS00010;product=DNA polymerase III subunit beta;protein_id=WP_004107206.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2645 3718 . + . ID=gene-PHA56_RS00015;Name=recF;gbkey=Gene;gene=recF;gene_biotype=protein_coding;locus_tag=PHA56_RS00015;old_locus_tag=PHA56_00015 NZ_CP116214.1 Protein Homology CDS 2645 3718 . + 0 ID=cds-WP_004126948.1;Parent=gene-PHA56_RS00015;Dbxref=Genbank:WP_004126948.1;Name=WP_004126948.1;Ontology_term=GO:0006281,GO:0003697,GO:0005524;gbkey=CDS;gene=recF;go_function=single-stranded DNA binding|0003697||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121479.1;locus_tag=PHA56_RS00015;product=DNA replication/repair protein RecF;protein_id=WP_004126948.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3747 6161 . + . ID=gene-PHA56_RS00020;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=protein_coding;locus_tag=PHA56_RS00020;old_locus_tag=PHA56_00020 NZ_CP116214.1 Protein Homology CDS 3747 6161 . + 0 ID=cds-WP_004126944.1;Parent=gene-PHA56_RS00020;Dbxref=Genbank:WP_004126944.1;Name=WP_004126944.1;Ontology_term=GO:0006265,GO:0003918,GO:0009330;gbkey=CDS;gene=gyrB;go_component=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) complex|0009330||IEA;go_function=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121480.1;locus_tag=PHA56_RS00020;product=DNA topoisomerase (ATP-hydrolyzing) subunit B;protein_id=WP_004126944.1;transl_table=11 NZ_CP116214.1 RefSeq gene 6194 7129 . - . ID=gene-PHA56_RS00025;Name=PHA56_RS00025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS00025;old_locus_tag=PHA56_00025 NZ_CP116214.1 Protein Homology CDS 6194 7129 . - 0 ID=cds-WP_076752608.1;Parent=gene-PHA56_RS00025;Dbxref=Genbank:WP_076752608.1;Name=WP_076752608.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014839853.1;locus_tag=PHA56_RS00025;product=LysR family transcriptional regulator;protein_id=WP_076752608.1;transl_table=11 NZ_CP116214.1 RefSeq gene 7240 8265 . + . ID=gene-PHA56_RS00030;Name=PHA56_RS00030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS00030;old_locus_tag=PHA56_00030 NZ_CP116214.1 Protein Homology CDS 7240 8265 . + 0 ID=cds-WP_014839852.1;Parent=gene-PHA56_RS00030;Dbxref=Genbank:WP_014839852.1;Name=WP_014839852.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004855699.1;locus_tag=PHA56_RS00030;product=NAD(P)-dependent alcohol dehydrogenase;protein_id=WP_014839852.1;transl_table=11 NZ_CP116214.1 RefSeq gene 8381 9193 . + . ID=gene-PHA56_RS00035;Name=yidA;gbkey=Gene;gene=yidA;gene_biotype=protein_coding;locus_tag=PHA56_RS00035;old_locus_tag=PHA56_00035 NZ_CP116214.1 Protein Homology CDS 8381 9193 . + 0 ID=cds-WP_004855697.1;Parent=gene-PHA56_RS00035;Dbxref=Genbank:WP_004855697.1;Name=WP_004855697.1;Ontology_term=GO:0016787;gbkey=CDS;gene=yidA;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003840602.1;locus_tag=PHA56_RS00035;product=sugar-phosphatase;protein_id=WP_004855697.1;transl_table=11 NZ_CP116214.1 RefSeq gene 9435 10124 . + . ID=gene-PHA56_RS00040;Name=dgoR;gbkey=Gene;gene=dgoR;gene_biotype=protein_coding;locus_tag=PHA56_RS00040;old_locus_tag=PHA56_00040 NZ_CP116214.1 Protein Homology CDS 9435 10124 . + 0 ID=cds-WP_014227332.1;Parent=gene-PHA56_RS00040;Dbxref=Genbank:WP_014227332.1;Name=WP_014227332.1;gbkey=CDS;gene=dgoR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462730.1;locus_tag=PHA56_RS00040;product=D-galactonate utilization transcriptional regulator DgoR;protein_id=WP_014227332.1;transl_table=11 NZ_CP116214.1 RefSeq gene 10121 10996 . + . ID=gene-PHA56_RS00045;Name=PHA56_RS00045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS00045;old_locus_tag=PHA56_00045 NZ_CP116214.1 Protein Homology CDS 10121 10996 . + 0 ID=cds-WP_042946146.1;Parent=gene-PHA56_RS00045;Dbxref=Genbank:WP_042946146.1;Name=WP_042946146.1;Ontology_term=GO:0034194,GO:0008671;gbkey=CDS;go_function=2-dehydro-3-deoxygalactonokinase activity|0008671||IEA;go_process=D-galactonate catabolic process|0034194||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229570.1;locus_tag=PHA56_RS00045;product=2-dehydro-3-deoxygalactonokinase;protein_id=WP_042946146.1;transl_table=11 NZ_CP116214.1 RefSeq gene 10980 11597 . + . ID=gene-PHA56_RS00050;Name=PHA56_RS00050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS00050;old_locus_tag=PHA56_00050 NZ_CP116214.1 Protein Homology CDS 10980 11597 . + 0 ID=cds-WP_014839850.1;Parent=gene-PHA56_RS00050;Dbxref=Genbank:WP_014839850.1;Name=WP_014839850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229569.1;locus_tag=PHA56_RS00050;product=2-dehydro-3-deoxy-6-phosphogalactonate aldolase;protein_id=WP_014839850.1;transl_table=11 NZ_CP116214.1 RefSeq gene 11594 12742 . + . ID=gene-PHA56_RS00055;Name=dgoD;gbkey=Gene;gene=dgoD;gene_biotype=protein_coding;locus_tag=PHA56_RS00055;old_locus_tag=PHA56_00055 NZ_CP116214.1 Protein Homology CDS 11594 12742 . + 0 ID=cds-WP_014227329.1;Parent=gene-PHA56_RS00055;Dbxref=Genbank:WP_014227329.1;Name=WP_014227329.1;Ontology_term=GO:0009063,GO:0008869;gbkey=CDS;gene=dgoD;go_function=galactonate dehydratase activity|0008869||IEA;go_process=amino acid catabolic process|0009063||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020077623.1;locus_tag=PHA56_RS00055;product=galactonate dehydratase;protein_id=WP_014227329.1;transl_table=11 NZ_CP116214.1 RefSeq gene 12922 14259 . + . ID=gene-PHA56_RS00060;Name=PHA56_RS00060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS00060;old_locus_tag=PHA56_00060 NZ_CP116214.1 Protein Homology CDS 12922 14259 . + 0 ID=cds-WP_071846050.1;Parent=gene-PHA56_RS00060;Dbxref=Genbank:WP_071846050.1;Name=WP_071846050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709507.1;locus_tag=PHA56_RS00060;product=MFS transporter;protein_id=WP_071846050.1;transl_table=11 NZ_CP116214.1 RefSeq gene 14311 15537 . + . ID=gene-PHA56_RS00065;Name=PHA56_RS00065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS00065;old_locus_tag=PHA56_00065 NZ_CP116214.1 Protein Homology CDS 14311 15537 . + 0 ID=cds-WP_042946145.1;Parent=gene-PHA56_RS00065;Dbxref=Genbank:WP_042946145.1;Name=WP_042946145.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229566.1;locus_tag=PHA56_RS00065;product=DUF3748 domain-containing protein;protein_id=WP_042946145.1;transl_table=11 NZ_CP116214.1 RefSeq gene 15539 15868 . - . ID=gene-PHA56_RS00070;Name=PHA56_RS00070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS00070;old_locus_tag=PHA56_00070 NZ_CP116214.1 Protein Homology CDS 15539 15868 . - 0 ID=cds-WP_162097183.1;Parent=gene-PHA56_RS00070;Dbxref=Genbank:WP_162097183.1;Name=WP_162097183.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004107171.1;locus_tag=PHA56_RS00070;product=YceK/YidQ family lipoprotein;protein_id=WP_162097183.1;transl_table=11 NZ_CP116214.1 cmsearch sequence_feature 16172 16246 . + . ID=id-NZ_CP116214.1:16172..16246;Dbxref=RFAM:RF01832;Note=ROSE (Repression Of Heat Shock gene Expression) occurs in the 5'-region of heat shock genes and acts as an RNA thermometer to modulate expression.;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.1 NZ_CP116214.1 RefSeq gene 16240 16653 . + . ID=gene-PHA56_RS00075;Name=ibpA;gbkey=Gene;gene=ibpA;gene_biotype=protein_coding;locus_tag=PHA56_RS00075;old_locus_tag=PHA56_00075 NZ_CP116214.1 Protein Homology CDS 16240 16653 . + 0 ID=cds-WP_004126917.1;Parent=gene-PHA56_RS00075;Dbxref=Genbank:WP_004126917.1;Name=WP_004126917.1;gbkey=CDS;gene=ibpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006687722.1;locus_tag=PHA56_RS00075;product=heat shock chaperone IbpA;protein_id=WP_004126917.1;transl_table=11 NZ_CP116214.1 RefSeq gene 16772 17200 . + . ID=gene-PHA56_RS00080;Name=ibpB;gbkey=Gene;gene=ibpB;gene_biotype=protein_coding;locus_tag=PHA56_RS00080;old_locus_tag=PHA56_00080 NZ_CP116214.1 Protein Homology CDS 16772 17200 . + 0 ID=cds-WP_042946144.1;Parent=gene-PHA56_RS00080;Dbxref=Genbank:WP_042946144.1;Name=WP_042946144.1;gbkey=CDS;gene=ibpB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229563.1;locus_tag=PHA56_RS00080;product=heat shock chaperone IbpB;protein_id=WP_042946144.1;transl_table=11 NZ_CP116214.1 RefSeq gene 17397 19058 . + . ID=gene-PHA56_RS00085;Name=PHA56_RS00085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS00085;old_locus_tag=PHA56_00085 NZ_CP116214.1 Protein Homology CDS 17397 19058 . + 0 ID=cds-WP_004855675.1;Parent=gene-PHA56_RS00085;Dbxref=Genbank:WP_004855675.1;Name=WP_004855675.1;Ontology_term=GO:0006813,GO:0008324;gbkey=CDS;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462707.1;locus_tag=PHA56_RS00085;product=putative transporter;protein_id=WP_004855675.1;transl_table=11 NZ_CP116214.1 RefSeq gene 19026 19772 . - . ID=gene-PHA56_RS00090;Name=PHA56_RS00090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS00090;old_locus_tag=PHA56_00090 NZ_CP116214.1 Protein Homology CDS 19026 19772 . - 0 ID=cds-WP_038423888.1;Parent=gene-PHA56_RS00090;Dbxref=Genbank:WP_038423888.1;Name=WP_038423888.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008806752.1;locus_tag=PHA56_RS00090;product=GntR family transcriptional regulator;protein_id=WP_038423888.1;transl_table=11 NZ_CP116214.1 RefSeq gene 20114 21736 . + . ID=gene-PHA56_RS00095;Name=PHA56_RS00095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS00095;old_locus_tag=PHA56_00095 NZ_CP116214.1 Protein Homology CDS 20114 21736 . + 0 ID=cds-WP_009654320.1;Parent=gene-PHA56_RS00095;Dbxref=Genbank:WP_009654320.1;Name=WP_009654320.1;Ontology_term=GO:0015144;gbkey=CDS;go_function=carbohydrate transmembrane transporter activity|0015144||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229559.1;locus_tag=PHA56_RS00095;product=alpha-glucoside-specific PTS transporter subunit IIBC;protein_id=WP_009654320.1;transl_table=11 NZ_CP116214.1 RefSeq gene 21733 23055 . + . ID=gene-PHA56_RS00100;Name=PHA56_RS00100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS00100;old_locus_tag=PHA56_00100 NZ_CP116214.1 Protein Homology CDS 21733 23055 . + 0 ID=cds-WP_004855669.1;Parent=gene-PHA56_RS00100;Dbxref=Genbank:WP_004855669.1;Name=WP_004855669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229558.1;locus_tag=PHA56_RS00100;product=6-phospho-alpha-glucosidase;protein_id=WP_004855669.1;transl_table=11 NZ_CP116214.1 RefSeq gene 23236 23583 . + . ID=gene-PHA56_RS00105;Name=PHA56_RS00105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS00105;old_locus_tag=PHA56_00105 NZ_CP116214.1 Protein Homology CDS 23236 23583 . + 0 ID=cds-WP_004855665.1;Parent=gene-PHA56_RS00105;Dbxref=Genbank:WP_004855665.1;Name=WP_004855665.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229557.1;locus_tag=PHA56_RS00105;product=DUF202 domain-containing protein;protein_id=WP_004855665.1;transl_table=11 NZ_CP116214.1 RefSeq gene 23573 23935 . + . ID=gene-PHA56_RS00110;Name=PHA56_RS00110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS00110;old_locus_tag=PHA56_00110 NZ_CP116214.1 Protein Homology CDS 23573 23935 . + 0 ID=cds-WP_014227322.1;Parent=gene-PHA56_RS00110;Dbxref=Genbank:WP_014227322.1;Name=WP_014227322.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017899669.1;locus_tag=PHA56_RS00110;product=DUF202 domain-containing protein;protein_id=WP_014227322.1;transl_table=11 NZ_CP116214.1 RefSeq gene 23932 24462 . + . ID=gene-PHA56_RS00115;Name=PHA56_RS00115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS00115;old_locus_tag=PHA56_00115 NZ_CP116214.1 Protein Homology CDS 23932 24462 . + 0 ID=cds-WP_042946143.1;Parent=gene-PHA56_RS00115;Dbxref=Genbank:WP_042946143.1;Name=WP_042946143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004855659.1;locus_tag=PHA56_RS00115;product=radical SAM protein;protein_id=WP_042946143.1;transl_table=11 NZ_CP116214.1 RefSeq gene 24515 25843 . - . ID=gene-PHA56_RS00120;Name=dsdA;gbkey=Gene;gene=dsdA;gene_biotype=protein_coding;locus_tag=PHA56_RS00120;old_locus_tag=PHA56_00120 NZ_CP116214.1 Protein Homology CDS 24515 25843 . - 0 ID=cds-WP_014227321.1;Parent=gene-PHA56_RS00120;Dbxref=Genbank:WP_014227321.1;Name=WP_014227321.1;Ontology_term=GO:0046416,GO:0008721,GO:0005737;gbkey=CDS;gene=dsdA;go_component=cytoplasm|0005737||IEA;go_function=D-serine ammonia-lyase activity|0008721||IEA;go_process=D-amino acid metabolic process|0046416||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229554.1;locus_tag=PHA56_RS00120;product=D-serine ammonia-lyase;protein_id=WP_014227321.1;transl_table=11 NZ_CP116214.1 RefSeq gene 25861 27198 . - . ID=gene-PHA56_RS00125;Name=dsdX;gbkey=Gene;gene=dsdX;gene_biotype=protein_coding;locus_tag=PHA56_RS00125;old_locus_tag=PHA56_00125 NZ_CP116214.1 Protein Homology CDS 25861 27198 . - 0 ID=cds-WP_004116631.1;Parent=gene-PHA56_RS00125;Dbxref=Genbank:WP_004116631.1;Name=WP_004116631.1;Ontology_term=GO:0035429,GO:0015128,GO:0016020;gbkey=CDS;gene=dsdX;go_component=membrane|0016020||IEA;go_function=gluconate transmembrane transporter activity|0015128||IEA;go_process=gluconate transmembrane transport|0035429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229553.1;locus_tag=PHA56_RS00125;product=D-serine transporter DsdX;protein_id=WP_004116631.1;transl_table=11 NZ_CP116214.1 RefSeq gene 27422 28351 . + . ID=gene-PHA56_RS00130;Name=dsdC;gbkey=Gene;gene=dsdC;gene_biotype=protein_coding;locus_tag=PHA56_RS00130;old_locus_tag=PHA56_00130 NZ_CP116214.1 Protein Homology CDS 27422 28351 . + 0 ID=cds-WP_189087307.1;Parent=gene-PHA56_RS00130;Dbxref=Genbank:WP_189087307.1;Name=WP_189087307.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=dsdC;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009654317.1;locus_tag=PHA56_RS00130;product=DNA-binding transcriptional regulator DsdC;protein_id=WP_189087307.1;transl_table=11 NZ_CP116214.1 RefSeq gene 28598 29782 . - . ID=gene-PHA56_RS00135;Name=emrD;gbkey=Gene;gene=emrD;gene_biotype=protein_coding;locus_tag=PHA56_RS00135;old_locus_tag=PHA56_00135 NZ_CP116214.1 Protein Homology CDS 28598 29782 . - 0 ID=cds-WP_042946141.1;Parent=gene-PHA56_RS00135;Dbxref=Genbank:WP_042946141.1;Name=WP_042946141.1;gbkey=CDS;gene=emrD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229550.1;locus_tag=PHA56_RS00135;product=multidrug efflux MFS transporter EmrD;protein_id=WP_042946141.1;transl_table=11 NZ_CP116214.1 RefSeq gene 29960 30793 . - . ID=gene-PHA56_RS00140;Name=PHA56_RS00140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS00140;old_locus_tag=PHA56_00140 NZ_CP116214.1 Protein Homology CDS 29960 30793 . - 0 ID=cds-WP_014227319.1;Parent=gene-PHA56_RS00140;Dbxref=Genbank:WP_014227319.1;Name=WP_014227319.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229549.1;locus_tag=PHA56_RS00140;product=DMT family transporter;protein_id=WP_014227319.1;transl_table=11 NZ_CP116214.1 RefSeq gene 30864 31310 . - . ID=gene-PHA56_RS00145;Name=PHA56_RS00145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS00145;old_locus_tag=PHA56_00145 NZ_CP116214.1 Protein Homology CDS 30864 31310 . - 0 ID=cds-WP_004855646.1;Parent=gene-PHA56_RS00145;Dbxref=Genbank:WP_004855646.1;Name=WP_004855646.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229548.1;locus_tag=PHA56_RS00145;product=GNAT family N-acetyltransferase;protein_id=WP_004855646.1;transl_table=11 NZ_CP116214.1 RefSeq gene 31382 31471 . - . ID=gene-PHA56_RS00150;Name=tisB;gbkey=Gene;gene=tisB;gene_biotype=protein_coding;locus_tag=PHA56_RS00150;old_locus_tag=PHA56_00150 NZ_CP116214.1 Protein Homology CDS 31382 31471 . - 0 ID=cds-WP_004107126.1;Parent=gene-PHA56_RS00150;Dbxref=Genbank:WP_004107126.1;Name=WP_004107126.1;Ontology_term=GO:0022611,GO:0015075;gbkey=CDS;gene=tisB;go_function=monoatomic ion transmembrane transporter activity|0015075||IEA;go_process=dormancy process|0022611||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002923292.1;locus_tag=PHA56_RS00150;product=type I toxin-antitoxin system toxin TisB;protein_id=WP_004107126.1;transl_table=11 NZ_CP116214.1 RefSeq gene 32053 32148 . + . ID=gene-PHA56_RS00155;Name=ivbL;gbkey=Gene;gene=ivbL;gene_biotype=protein_coding;locus_tag=PHA56_RS00155;old_locus_tag=PHA56_00155 NZ_CP116214.1 Protein Homology CDS 32053 32148 . + 0 ID=cds-WP_004107123.1;Parent=gene-PHA56_RS00155;Dbxref=Genbank:WP_004107123.1;Name=WP_004107123.1;gbkey=CDS;gene=ivbL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002923286.1;locus_tag=PHA56_RS00155;product=ilvB operon leader peptide IvbL;protein_id=WP_004107123.1;transl_table=11 NZ_CP116214.1 RefSeq gene 32251 33939 . + . ID=gene-PHA56_RS00160;Name=ilvB;gbkey=Gene;gene=ilvB;gene_biotype=protein_coding;locus_tag=PHA56_RS00160;old_locus_tag=PHA56_00160 NZ_CP116214.1 Protein Homology CDS 32251 33939 . + 0 ID=cds-WP_038423885.1;Parent=gene-PHA56_RS00160;Dbxref=Genbank:WP_038423885.1;Name=WP_038423885.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvB;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462695.1;locus_tag=PHA56_RS00160;product=acetolactate synthase large subunit;protein_id=WP_038423885.1;transl_table=11 NZ_CP116214.1 RefSeq gene 33943 34233 . + . ID=gene-PHA56_RS00165;Name=ilvN;gbkey=Gene;gene=ilvN;gene_biotype=protein_coding;locus_tag=PHA56_RS00165;old_locus_tag=PHA56_00165 NZ_CP116214.1 Protein Homology CDS 33943 34233 . + 0 ID=cds-WP_004855635.1;Parent=gene-PHA56_RS00165;Dbxref=Genbank:WP_004855635.1;Name=WP_004855635.1;gbkey=CDS;gene=ilvN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462694.1;locus_tag=PHA56_RS00165;product=acetolactate synthase small subunit;protein_id=WP_004855635.1;transl_table=11 NZ_CP116214.1 RefSeq gene 34416 35009 . + . ID=gene-PHA56_RS00170;Name=uhpA;gbkey=Gene;gene=uhpA;gene_biotype=protein_coding;locus_tag=PHA56_RS00170;old_locus_tag=PHA56_00170 NZ_CP116214.1 Protein Homology CDS 34416 35009 . + 0 ID=cds-WP_004107112.1;Parent=gene-PHA56_RS00170;Dbxref=Genbank:WP_004107112.1;Name=WP_004107112.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=uhpA;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229543.1;locus_tag=PHA56_RS00170;product=transcriptional regulator UhpA;protein_id=WP_004107112.1;transl_table=11 NZ_CP116214.1 RefSeq gene 35027 36508 . + . ID=gene-PHA56_RS00175;Name=uhpB;gbkey=Gene;gene=uhpB;gene_biotype=protein_coding;locus_tag=PHA56_RS00175;old_locus_tag=PHA56_00175 NZ_CP116214.1 Protein Homology CDS 35027 36508 . + 0 ID=cds-WP_162933650.1;Parent=gene-PHA56_RS00175;Dbxref=Genbank:WP_162933650.1;Name=WP_162933650.1;Ontology_term=GO:0000160,GO:0000155;gbkey=CDS;gene=uhpB;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229542.1;locus_tag=PHA56_RS00175;product=signal transduction histidine-protein kinase/phosphatase UhpB;protein_id=WP_162933650.1;transl_table=11 NZ_CP116214.1 RefSeq gene 36518 37837 . + . ID=gene-PHA56_RS00180;Name=PHA56_RS00180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS00180;old_locus_tag=PHA56_00180 NZ_CP116214.1 Protein Homology CDS 36518 37837 . + 0 ID=cds-WP_014227316.1;Parent=gene-PHA56_RS00180;Dbxref=Genbank:WP_014227316.1;Name=WP_014227316.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000936566.1;locus_tag=PHA56_RS00180;product=MFS transporter;protein_id=WP_014227316.1;transl_table=11 NZ_CP116214.1 RefSeq gene 37983 39374 . + . ID=gene-PHA56_RS00185;Name=uhpT;gbkey=Gene;gene=uhpT;gene_biotype=protein_coding;locus_tag=PHA56_RS00185;old_locus_tag=PHA56_00185 NZ_CP116214.1 Protein Homology CDS 37983 39374 . + 0 ID=cds-WP_004126843.1;Parent=gene-PHA56_RS00185;Dbxref=Genbank:WP_004126843.1;Name=WP_004126843.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=uhpT;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229540.1;locus_tag=PHA56_RS00185;product=hexose-6-phosphate:phosphate antiporter;protein_id=WP_004126843.1;transl_table=11 NZ_CP116214.1 RefSeq gene 39823 40275 . + . ID=gene-PHA56_RS00190;Name=PHA56_RS00190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS00190;old_locus_tag=PHA56_00190 NZ_CP116214.1 Protein Homology CDS 39823 40275 . + 0 ID=cds-WP_014839842.1;Parent=gene-PHA56_RS00190;Dbxref=Genbank:WP_014839842.1;Name=WP_014839842.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229539.1;locus_tag=PHA56_RS00190;product=DUF1198 domain-containing protein;protein_id=WP_014839842.1;transl_table=11 NZ_CP116214.1 RefSeq gene 40526 40867 . + . ID=gene-PHA56_RS00195;Name=PHA56_RS00195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS00195;old_locus_tag=PHA56_00195 NZ_CP116214.1 Protein Homology CDS 40526 40867 . + 0 ID=cds-WP_014227314.1;Parent=gene-PHA56_RS00195;Dbxref=Genbank:WP_014227314.1;Name=WP_014227314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000263533.1;locus_tag=PHA56_RS00195;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_014227314.1;transl_table=11 NZ_CP116214.1 RefSeq gene 40877 41176 . + . ID=gene-PHA56_RS00200;Name=PHA56_RS00200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS00200;old_locus_tag=PHA56_00200 NZ_CP116214.1 Protein Homology CDS 40877 41176 . + 0 ID=cds-WP_014227313.1;Parent=gene-PHA56_RS00200;Dbxref=Genbank:WP_014227313.1;Name=WP_014227313.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008806992.1;locus_tag=PHA56_RS00200;product=helix-turn-helix transcriptional regulator;protein_id=WP_014227313.1;transl_table=11 NZ_CP116214.1 RefSeq gene 41295 42476 . + . ID=gene-PHA56_RS00205;Name=nepI;gbkey=Gene;gene=nepI;gene_biotype=protein_coding;locus_tag=PHA56_RS00205;old_locus_tag=PHA56_00205 NZ_CP116214.1 Protein Homology CDS 41295 42476 . + 0 ID=cds-WP_014227312.1;Parent=gene-PHA56_RS00205;Dbxref=Genbank:WP_014227312.1;Name=WP_014227312.1;Ontology_term=GO:0015860,GO:0015211,GO:0016020;gbkey=CDS;gene=nepI;go_component=membrane|0016020||IEA;go_function=purine nucleoside transmembrane transporter activity|0015211||IEA;go_process=purine nucleoside transmembrane transport|0015860||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017145204.1;locus_tag=PHA56_RS00205;product=purine ribonucleoside efflux pump NepI;protein_id=WP_014227312.1;transl_table=11 NZ_CP116214.1 RefSeq gene 42509 43318 . - . ID=gene-PHA56_RS00210;Name=PHA56_RS00210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS00210;old_locus_tag=PHA56_00210 NZ_CP116214.1 Protein Homology CDS 42509 43318 . - 0 ID=cds-WP_004855618.1;Parent=gene-PHA56_RS00210;Dbxref=Genbank:WP_004855618.1;Name=WP_004855618.1;Ontology_term=GO:0019700,GO:0050194;gbkey=CDS;go_function=phosphonoacetaldehyde hydrolase activity|0050194||IEA;go_process=organic phosphonate catabolic process|0019700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229535.1;locus_tag=PHA56_RS00210;product=phosphonoacetaldehyde hydrolase;protein_id=WP_004855618.1;transl_table=11 NZ_CP116214.1 RefSeq gene 43328 44431 . - . ID=gene-PHA56_RS00215;Name=phnW;gbkey=Gene;gene=phnW;gene_biotype=protein_coding;locus_tag=PHA56_RS00215;old_locus_tag=PHA56_00215 NZ_CP116214.1 Protein Homology CDS 43328 44431 . - 0 ID=cds-WP_014227310.1;Parent=gene-PHA56_RS00215;Dbxref=Genbank:WP_014227310.1;Name=WP_014227310.1;Ontology_term=GO:0019700,GO:0047304;gbkey=CDS;gene=phnW;go_function=2-aminoethylphosphonate-pyruvate transaminase activity|0047304||IEA;go_process=organic phosphonate catabolic process|0019700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016807670.1;locus_tag=PHA56_RS00215;product=2-aminoethylphosphonate--pyruvate transaminase;protein_id=WP_014227310.1;transl_table=11 NZ_CP116214.1 RefSeq gene 44572 45291 . + . ID=gene-PHA56_RS00220;Name=phnR;gbkey=Gene;gene=phnR;gene_biotype=protein_coding;locus_tag=PHA56_RS00220;old_locus_tag=PHA56_00220 NZ_CP116214.1 Protein Homology CDS 44572 45291 . + 0 ID=cds-WP_076752428.1;Parent=gene-PHA56_RS00220;Dbxref=Genbank:WP_076752428.1;Name=WP_076752428.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=phnR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229533.1;locus_tag=PHA56_RS00220;product=phosphonate utilization transcriptional regulator PhnR;protein_id=WP_076752428.1;transl_table=11 NZ_CP116214.1 RefSeq gene 45540 46553 . + . ID=gene-PHA56_RS00225;Name=phnS;gbkey=Gene;gene=phnS;gene_biotype=protein_coding;locus_tag=PHA56_RS00225;old_locus_tag=PHA56_00225 NZ_CP116214.1 Protein Homology CDS 45540 46553 . + 0 ID=cds-WP_038423883.1;Parent=gene-PHA56_RS00225;Dbxref=Genbank:WP_038423883.1;Name=WP_038423883.1;Ontology_term=GO:0033223,GO:0033225,GO:0033226,GO:0009897,GO:0030288,GO:0055052;gbkey=CDS;gene=phnS;go_component=external side of plasma membrane|0009897||IEA,outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled 2-aminoethylphosphonate transporter activity|0033225||IEA,2-aminoethylphosphonate binding|0033226||IEA;go_process=2-aminoethylphosphonate transport|0033223||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229532.1;locus_tag=PHA56_RS00225;product=2-aminoethylphosphonate ABC transporter substrate-binding protein;protein_id=WP_038423883.1;transl_table=11 NZ_CP116214.1 RefSeq gene 46559 47671 . + . ID=gene-PHA56_RS00230;Name=phnT;gbkey=Gene;gene=phnT;gene_biotype=protein_coding;locus_tag=PHA56_RS00230;old_locus_tag=PHA56_00230 NZ_CP116214.1 Protein Homology CDS 46559 47671 . + 0 ID=cds-WP_014227307.1;Parent=gene-PHA56_RS00230;Dbxref=Genbank:WP_014227307.1;Name=WP_014227307.1;Ontology_term=GO:0033223,GO:0005524,GO:0033225,GO:0009898,GO:0055052;gbkey=CDS;gene=phnT;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled 2-aminoethylphosphonate transporter activity|0033225||IEA;go_process=2-aminoethylphosphonate transport|0033223||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004116581.1;locus_tag=PHA56_RS00230;product=2-aminoethylphosphonate ABC transport system ATP-binding subunit PhnT;protein_id=WP_014227307.1;transl_table=11 NZ_CP116214.1 RefSeq gene 47671 48531 . + . ID=gene-PHA56_RS00235;Name=phnU;gbkey=Gene;gene=phnU;gene_biotype=protein_coding;locus_tag=PHA56_RS00235;old_locus_tag=PHA56_00235 NZ_CP116214.1 Protein Homology CDS 47671 48531 . + 0 ID=cds-WP_014839836.1;Parent=gene-PHA56_RS00235;Dbxref=Genbank:WP_014839836.1;Name=WP_014839836.1;Ontology_term=GO:0033223,GO:0033225,GO:0005886,GO:0055052;gbkey=CDS;gene=phnU;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled 2-aminoethylphosphonate transporter activity|0033225||IEA;go_process=2-aminoethylphosphonate transport|0033223||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229530.1;locus_tag=PHA56_RS00235;product=2-aminoethylphosphonate ABC transporter permease subunit;protein_id=WP_014839836.1;transl_table=11 NZ_CP116214.1 RefSeq gene 48534 49331 . + . ID=gene-PHA56_RS00240;Name=phnV;gbkey=Gene;gene=phnV;gene_biotype=protein_coding;locus_tag=PHA56_RS00240;old_locus_tag=PHA56_00240 NZ_CP116214.1 Protein Homology CDS 48534 49331 . + 0 ID=cds-WP_014227306.1;Parent=gene-PHA56_RS00240;Dbxref=Genbank:WP_014227306.1;Name=WP_014227306.1;Ontology_term=GO:0033223,GO:0033225,GO:0005886,GO:0055052;gbkey=CDS;gene=phnV;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled 2-aminoethylphosphonate transporter activity|0033225||IEA;go_process=2-aminoethylphosphonate transport|0033223||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459421.1;locus_tag=PHA56_RS00240;product=2-aminoethylphosphonate ABC transport system%2C membrane component PhnV;protein_id=WP_014227306.1;transl_table=11 NZ_CP116214.1 RefSeq gene 49529 50908 . - . ID=gene-PHA56_RS00245;Name=PHA56_RS00245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS00245;old_locus_tag=PHA56_00245 NZ_CP116214.1 Protein Homology CDS 49529 50908 . - 0 ID=cds-WP_076752607.1;Parent=gene-PHA56_RS00245;Dbxref=Genbank:WP_076752607.1;Name=WP_076752607.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229527.1;locus_tag=PHA56_RS00245;product=carbohydrate porin;protein_id=WP_076752607.1;transl_table=11 NZ_CP116214.1 RefSeq gene 51136 51438 . - . ID=gene-PHA56_RS00250;Name=PHA56_RS00250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS00250;old_locus_tag=PHA56_00250 NZ_CP116214.1 Protein Homology CDS 51136 51438 . - 0 ID=cds-WP_004855598.1;Parent=gene-PHA56_RS00250;Dbxref=Genbank:WP_004855598.1;Name=WP_004855598.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229526.1;locus_tag=PHA56_RS00250;product=PTS lactose/cellobiose transporter subunit IIA;protein_id=WP_004855598.1;transl_table=11 NZ_CP116214.1 RefSeq gene 51547 52872 . - . ID=gene-PHA56_RS00255;Name=PHA56_RS00255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS00255;old_locus_tag=PHA56_00255 NZ_CP116214.1 Protein Homology CDS 51547 52872 . - 0 ID=cds-WP_014227305.1;Parent=gene-PHA56_RS00255;Dbxref=Genbank:WP_014227305.1;Name=WP_014227305.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014227305.1;locus_tag=PHA56_RS00255;product=PTS transporter subunit EIIC;protein_id=WP_014227305.1;transl_table=11 NZ_CP116214.1 RefSeq gene 52884 53195 . - . ID=gene-PHA56_RS00260;Name=PHA56_RS00260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS00260;old_locus_tag=PHA56_00260 NZ_CP116214.1 Protein Homology CDS 52884 53195 . - 0 ID=cds-WP_271292944.1;Parent=gene-PHA56_RS00260;Dbxref=Genbank:WP_271292944.1;Name=WP_271292944.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229524.1;locus_tag=PHA56_RS00260;product=PTS sugar transporter subunit IIB;protein_id=WP_271292944.1;transl_table=11 NZ_CP116214.1 RefSeq gene 53490 54431 . + . ID=gene-PHA56_RS00265;Name=PHA56_RS00265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS00265;old_locus_tag=PHA56_00265 NZ_CP116214.1 Protein Homology CDS 53490 54431 . + 0 ID=cds-WP_014227303.1;Parent=gene-PHA56_RS00265;Dbxref=Genbank:WP_014227303.1;Name=WP_014227303.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004107045.1;locus_tag=PHA56_RS00265;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_014227303.1;transl_table=11 NZ_CP116214.1 RefSeq gene 54455 54748 . - . ID=gene-PHA56_RS00270;Name=PHA56_RS00270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS00270;old_locus_tag=PHA56_00270 NZ_CP116214.1 Protein Homology CDS 54455 54748 . - 0 ID=cds-WP_014227302.1;Parent=gene-PHA56_RS00270;Dbxref=Genbank:WP_014227302.1;Name=WP_014227302.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016809978.1;locus_tag=PHA56_RS00270;product=hypothetical protein;protein_id=WP_014227302.1;transl_table=11 NZ_CP116214.1 RefSeq gene 54958 55923 . + . ID=gene-PHA56_RS00275;Name=PHA56_RS00275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS00275;old_locus_tag=PHA56_00275 NZ_CP116214.1 Protein Homology CDS 54958 55923 . + 0 ID=cds-WP_038423881.1;Parent=gene-PHA56_RS00275;Dbxref=Genbank:WP_038423881.1;Name=WP_038423881.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014227301.1;locus_tag=PHA56_RS00275;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=WP_038423881.1;transl_table=11 NZ_CP116214.1 RefSeq gene 55923 56180 . + . ID=gene-PHA56_RS00280;Name=PHA56_RS00280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS00280;old_locus_tag=PHA56_00280 NZ_CP116214.1 Protein Homology CDS 55923 56180 . + 0 ID=cds-WP_032718834.1;Parent=gene-PHA56_RS00280;Dbxref=Genbank:WP_032718834.1;Name=WP_032718834.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004133131.1;locus_tag=PHA56_RS00280;product=hypothetical protein;protein_id=WP_032718834.1;transl_table=11 NZ_CP116214.1 RefSeq gene 56184 57086 . - . ID=gene-PHA56_RS00285;Name=PHA56_RS00285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS00285;old_locus_tag=PHA56_00285 NZ_CP116214.1 Protein Homology CDS 56184 57086 . - 0 ID=cds-WP_009654083.1;Parent=gene-PHA56_RS00285;Dbxref=Genbank:WP_009654083.1;Name=WP_009654083.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002923118.1;locus_tag=PHA56_RS00285;product=DMT family transporter;protein_id=WP_009654083.1;transl_table=11 NZ_CP116214.1 RefSeq gene 57237 57545 . - . ID=gene-PHA56_RS00290;Name=PHA56_RS00290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS00290;old_locus_tag=PHA56_00290 NZ_CP116214.1 Protein Homology CDS 57237 57545 . - 0 ID=cds-WP_014227299.1;Parent=gene-PHA56_RS00290;Dbxref=Genbank:WP_014227299.1;Name=WP_014227299.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014839830.1;locus_tag=PHA56_RS00290;product=CcdB family protein;protein_id=WP_014227299.1;transl_table=11 NZ_CP116214.1 RefSeq gene 57548 57784 . - . ID=gene-PHA56_RS00295;Name=PHA56_RS00295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS00295;old_locus_tag=PHA56_00295 NZ_CP116214.1 Protein Homology CDS 57548 57784 . - 0 ID=cds-WP_014227298.1;Parent=gene-PHA56_RS00295;Dbxref=Genbank:WP_014227298.1;Name=WP_014227298.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014227298.1;locus_tag=PHA56_RS00295;product=type II toxin-antitoxin system CcdA family antitoxin;protein_id=WP_014227298.1;transl_table=11 NZ_CP116214.1 RefSeq gene 57890 59323 . - . ID=gene-PHA56_RS00300;Name=murP;gbkey=Gene;gene=murP;gene_biotype=protein_coding;locus_tag=PHA56_RS00300;old_locus_tag=PHA56_00300 NZ_CP116214.1 Protein Homology CDS 57890 59323 . - 0 ID=cds-WP_038423880.1;Parent=gene-PHA56_RS00300;Dbxref=Genbank:WP_038423880.1;Name=WP_038423880.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;gene=murP;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229513.1;locus_tag=PHA56_RS00300;product=PTS N-acetylmuramic acid transporter subunit IIBC;protein_id=WP_038423880.1;transl_table=11 NZ_CP116214.1 RefSeq gene 59348 60250 . - . ID=gene-PHA56_RS00305;Name=murQ;gbkey=Gene;gene=murQ;gene_biotype=protein_coding;locus_tag=PHA56_RS00305;old_locus_tag=PHA56_00305 NZ_CP116214.1 Protein Homology CDS 59348 60250 . - 0 ID=cds-WP_038423879.1;Parent=gene-PHA56_RS00305;Dbxref=Genbank:WP_038423879.1;Name=WP_038423879.1;Ontology_term=GO:0006040,GO:0009254,GO:0016835;gbkey=CDS;gene=murQ;go_function=carbon-oxygen lyase activity|0016835||IEA;go_process=amino sugar metabolic process|0006040||IEA,peptidoglycan turnover|0009254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229512.1;locus_tag=PHA56_RS00305;product=N-acetylmuramic acid 6-phosphate etherase;protein_id=WP_038423879.1;transl_table=11 NZ_CP116214.1 RefSeq gene 60411 61577 . - . ID=gene-PHA56_RS00310;Name=PHA56_RS00310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS00310;old_locus_tag=PHA56_00310 NZ_CP116214.1 Protein Homology CDS 60411 61577 . - 0 ID=cds-WP_014839828.1;Parent=gene-PHA56_RS00310;Dbxref=Genbank:WP_014839828.1;Name=WP_014839828.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014227296.1;locus_tag=PHA56_RS00310;product=multidrug effflux MFS transporter;protein_id=WP_014839828.1;transl_table=11 NZ_CP116214.1 RefSeq gene 61628 62992 . - . ID=gene-PHA56_RS00315;Name=PHA56_RS00315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS00315;old_locus_tag=PHA56_00315 NZ_CP116214.1 Protein Homology CDS 61628 62992 . - 0 ID=cds-WP_014839827.1;Parent=gene-PHA56_RS00315;Dbxref=Genbank:WP_014839827.1;Name=WP_014839827.1;Ontology_term=GO:0006810,GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229510.1;locus_tag=PHA56_RS00315;product=efflux transporter outer membrane subunit;protein_id=WP_014839827.1;transl_table=11 NZ_CP116214.1 RefSeq gene 62996 66103 . - . ID=gene-PHA56_RS00320;Name=eefB;gbkey=Gene;gene=eefB;gene_biotype=protein_coding;locus_tag=PHA56_RS00320;old_locus_tag=PHA56_00320 NZ_CP116214.1 Protein Homology CDS 62996 66103 . - 0 ID=cds-WP_014227294.1;Parent=gene-PHA56_RS00320;Dbxref=Genbank:WP_014227294.1;Name=WP_014227294.1;gbkey=CDS;gene=eefB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229509.1;locus_tag=PHA56_RS00320;product=multidrug efflux RND transporter permease subunit EefB;protein_id=WP_014227294.1;transl_table=11 NZ_CP116214.1 RefSeq gene 66103 67227 . - . ID=gene-PHA56_RS00325;Name=PHA56_RS00325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS00325;old_locus_tag=PHA56_00325 NZ_CP116214.1 Protein Homology CDS 66103 67227 . - 0 ID=cds-WP_014227293.1;Parent=gene-PHA56_RS00325;Dbxref=Genbank:WP_014227293.1;Name=WP_014227293.1;Ontology_term=GO:0006810,GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020077652.1;locus_tag=PHA56_RS00325;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_014227293.1;transl_table=11 NZ_CP116214.1 RefSeq gene 67681 68097 . + . ID=gene-PHA56_RS00330;Name=PHA56_RS00330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS00330;old_locus_tag=PHA56_00330 NZ_CP116214.1 Protein Homology CDS 67681 68097 . + 0 ID=cds-WP_038423878.1;Parent=gene-PHA56_RS00330;Dbxref=Genbank:WP_038423878.1;Name=WP_038423878.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229505.1;locus_tag=PHA56_RS00330;product=GNAT family N-acetyltransferase;protein_id=WP_038423878.1;transl_table=11 NZ_CP116214.1 RefSeq gene 68299 68946 . - . ID=gene-PHA56_RS00335;Name=PHA56_RS00335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS00335;old_locus_tag=PHA56_00335 NZ_CP116214.1 Protein Homology CDS 68299 68946 . - 0 ID=cds-WP_014227291.1;Parent=gene-PHA56_RS00335;Dbxref=Genbank:WP_014227291.1;Name=WP_014227291.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229503.1;locus_tag=PHA56_RS00335;product=TetR/AcrR family transcriptional regulator;protein_id=WP_014227291.1;transl_table=11 NZ_CP116214.1 RefSeq gene 69027 70523 . + . ID=gene-PHA56_RS00340;Name=PHA56_RS00340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS00340;old_locus_tag=PHA56_00340 NZ_CP116214.1 Protein Homology CDS 69027 70523 . + 0 ID=cds-WP_032695129.1;Parent=gene-PHA56_RS00340;Dbxref=Genbank:WP_032695129.1;Name=WP_032695129.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009653348.1;locus_tag=PHA56_RS00340;product=MDR family MFS transporter;protein_id=WP_032695129.1;transl_table=11 NZ_CP116214.1 RefSeq gene 70520 71434 . - . ID=gene-PHA56_RS00345;Name=PHA56_RS00345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS00345;old_locus_tag=PHA56_00345 NZ_CP116214.1 Protein Homology CDS 70520 71434 . - 0 ID=cds-WP_119834560.1;Parent=gene-PHA56_RS00345;Dbxref=Genbank:WP_119834560.1;Name=WP_119834560.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009653342.1;locus_tag=PHA56_RS00345;product=LysR family transcriptional regulator;protein_id=WP_119834560.1;transl_table=11 NZ_CP116214.1 RefSeq gene 71537 72157 . + . ID=gene-PHA56_RS00350;Name=PHA56_RS00350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS00350;old_locus_tag=PHA56_00350 NZ_CP116214.1 Protein Homology CDS 71537 72157 . + 0 ID=cds-WP_038423876.1;Parent=gene-PHA56_RS00350;Dbxref=Genbank:WP_038423876.1;Name=WP_038423876.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014839820.1;locus_tag=PHA56_RS00350;product=pyridoxamine 5'-phosphate oxidase family protein;protein_id=WP_038423876.1;transl_table=11 NZ_CP116214.1 RefSeq gene 72288 72758 . + . ID=gene-PHA56_RS00355;Name=PHA56_RS00355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS00355;old_locus_tag=PHA56_00355 NZ_CP116214.1 Protein Homology CDS 72288 72758 . + 0 ID=cds-WP_014227287.1;Parent=gene-PHA56_RS00355;Dbxref=Genbank:WP_014227287.1;Name=WP_014227287.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229499.1;locus_tag=PHA56_RS00355;product=nuclear transport factor 2 family protein;protein_id=WP_014227287.1;transl_table=11 NZ_CP116214.1 RefSeq gene 73014 73823 . + . ID=gene-PHA56_RS00360;Name=nlpA;gbkey=Gene;gene=nlpA;gene_biotype=protein_coding;locus_tag=PHA56_RS00360;old_locus_tag=PHA56_00360 NZ_CP116214.1 Protein Homology CDS 73014 73823 . + 0 ID=cds-WP_014227286.1;Parent=gene-PHA56_RS00360;Dbxref=Genbank:WP_014227286.1;Name=WP_014227286.1;gbkey=CDS;gene=nlpA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229496.1;locus_tag=PHA56_RS00360;product=lipoprotein NlpA;protein_id=WP_014227286.1;transl_table=11 NZ_CP116214.1 RefSeq gene 73848 74708 . + . ID=gene-PHA56_RS00365;Name=PHA56_RS00365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS00365;old_locus_tag=PHA56_00365 NZ_CP116214.1 Protein Homology CDS 73848 74708 . + 0 ID=cds-WP_014839817.1;Parent=gene-PHA56_RS00365;Dbxref=Genbank:WP_014839817.1;Name=WP_014839817.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014839817.1;locus_tag=PHA56_RS00365;product=DMT family transporter;protein_id=WP_014839817.1;transl_table=11 NZ_CP116214.1 RefSeq gene 74700 75254 . - . ID=gene-PHA56_RS00370;Name=PHA56_RS00370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS00370;old_locus_tag=PHA56_00370 NZ_CP116214.1 Protein Homology CDS 74700 75254 . - 0 ID=cds-WP_038423875.1;Parent=gene-PHA56_RS00370;Dbxref=Genbank:WP_038423875.1;Name=WP_038423875.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004855557.1;locus_tag=PHA56_RS00370;product=NUDIX hydrolase;protein_id=WP_038423875.1;transl_table=11 NZ_CP116214.1 RefSeq gene 75424 76203 . + . ID=gene-PHA56_RS00375;Name=PHA56_RS00375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS00375;old_locus_tag=PHA56_00375 NZ_CP116214.1 Protein Homology CDS 75424 76203 . + 0 ID=cds-WP_032695125.1;Parent=gene-PHA56_RS00375;Dbxref=Genbank:WP_032695125.1;Name=WP_032695125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229493.1;locus_tag=PHA56_RS00375;product=MBL fold metallo-hydrolase;protein_id=WP_032695125.1;transl_table=11 NZ_CP116214.1 RefSeq gene 76218 77171 . + . ID=gene-PHA56_RS00380;Name=PHA56_RS00380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS00380;old_locus_tag=PHA56_00380 NZ_CP116214.1 Protein Homology CDS 76218 77171 . + 0 ID=cds-WP_014227282.1;Parent=gene-PHA56_RS00380;Dbxref=Genbank:WP_014227282.1;Name=WP_014227282.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229492.1;locus_tag=PHA56_RS00380;product=helix-turn-helix domain-containing protein;protein_id=WP_014227282.1;transl_table=11 NZ_CP116214.1 RefSeq gene 77168 78217 . - . ID=gene-PHA56_RS00385;Name=PHA56_RS00385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS00385;old_locus_tag=PHA56_00385 NZ_CP116214.1 Protein Homology CDS 77168 78217 . - 0 ID=cds-WP_014227281.1;Parent=gene-PHA56_RS00385;Dbxref=Genbank:WP_014227281.1;Name=WP_014227281.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229491.1;locus_tag=PHA56_RS00385;product=NAD(P)-dependent alcohol dehydrogenase;protein_id=WP_014227281.1;transl_table=11 NZ_CP116214.1 RefSeq gene 78376 78678 . - . ID=gene-PHA56_RS00390;Name=PHA56_RS00390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS00390;old_locus_tag=PHA56_00390 NZ_CP116214.1 Protein Homology CDS 78376 78678 . - 0 ID=cds-WP_014839815.1;Parent=gene-PHA56_RS00390;Dbxref=Genbank:WP_014839815.1;Name=WP_014839815.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004855548.1;locus_tag=PHA56_RS00390;product=putative quinol monooxygenase;protein_id=WP_014839815.1;transl_table=11 NZ_CP116214.1 RefSeq gene 78680 79687 . - . ID=gene-PHA56_RS00395;Name=PHA56_RS00395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS00395;old_locus_tag=PHA56_00395 NZ_CP116214.1 Protein Homology CDS 78680 79687 . - 0 ID=cds-WP_076752427.1;Parent=gene-PHA56_RS00395;Dbxref=Genbank:WP_076752427.1;Name=WP_076752427.1;Ontology_term=GO:0006113,GO:0004024,GO:0008270;gbkey=CDS;go_function=alcohol dehydrogenase activity%2C zinc-dependent|0004024||IEA,zinc ion binding|0008270||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229488.1;locus_tag=PHA56_RS00395;product=zinc-binding alcohol dehydrogenase family protein;protein_id=WP_076752427.1;transl_table=11 NZ_CP116214.1 RefSeq gene 79800 80267 . - . ID=gene-PHA56_RS00400;Name=PHA56_RS00400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS00400;old_locus_tag=PHA56_00400 NZ_CP116214.1 Protein Homology CDS 79800 80267 . - 0 ID=cds-WP_038424928.1;Parent=gene-PHA56_RS00400;Dbxref=Genbank:WP_038424928.1;Name=WP_038424928.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004137646.1;locus_tag=PHA56_RS00400;product=DUF3237 domain-containing protein;protein_id=WP_038424928.1;transl_table=11 NZ_CP116214.1 RefSeq gene 80455 81060 . + . ID=gene-PHA56_RS00405;Name=PHA56_RS00405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS00405;old_locus_tag=PHA56_00405 NZ_CP116214.1 Protein Homology CDS 80455 81060 . + 0 ID=cds-WP_076752426.1;Parent=gene-PHA56_RS00405;Dbxref=Genbank:WP_076752426.1;Name=WP_076752426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016809969.1;locus_tag=PHA56_RS00405;product=shikimate kinase;protein_id=WP_076752426.1;transl_table=11 NZ_CP116214.1 RefSeq pseudogene 81169 81681 . - . ID=gene-PHA56_RS00410;Name=rhuM;gbkey=Gene;gene=rhuM;gene_biotype=pseudogene;locus_tag=PHA56_RS00410;old_locus_tag=PHA56_00410;partial=true;pseudo=true;start_range=.,81169 NZ_CP116214.1 Protein Homology CDS 81169 81681 . - 0 ID=cds-PHA56_RS00410;Parent=gene-PHA56_RS00410;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=rhuM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000389730.1;locus_tag=PHA56_RS00410;partial=true;product=RhuM family protein;pseudo=true;start_range=.,81169;transl_table=11 NZ_CP116214.1 RefSeq gene 81806 82093 . - . ID=gene-PHA56_RS00415;Name=PHA56_RS00415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS00415;old_locus_tag=PHA56_00415 NZ_CP116214.1 Protein Homology CDS 81806 82093 . - 0 ID=cds-WP_032695122.1;Parent=gene-PHA56_RS00415;Dbxref=Genbank:WP_032695122.1;Name=WP_032695122.1;Ontology_term=GO:0016070,GO:0003723,GO:0016788,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=RNA binding|0003723||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016809967.1;locus_tag=PHA56_RS00415;product=SymE family type I addiction module toxin;protein_id=WP_032695122.1;transl_table=11 NZ_CP116214.1 RefSeq gene 82220 82411 . + . ID=gene-PHA56_RS00420;Name=PHA56_RS00420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS00420;old_locus_tag=PHA56_00420 NZ_CP116214.1 Protein Homology CDS 82220 82411 . + 0 ID=cds-WP_023321787.1;Parent=gene-PHA56_RS00420;Dbxref=Genbank:WP_023321787.1;Name=WP_023321787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009652903.1;locus_tag=PHA56_RS00420;product=toxin-antitoxin system HicB family antitoxin;protein_id=WP_023321787.1;transl_table=11 NZ_CP116214.1 RefSeq gene 82428 83156 . - . ID=gene-PHA56_RS00425;Name=PHA56_RS00425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS00425;old_locus_tag=PHA56_00425 NZ_CP116214.1 Protein Homology CDS 82428 83156 . - 0 ID=cds-WP_014227275.1;Parent=gene-PHA56_RS00425;Dbxref=Genbank:WP_014227275.1;Name=WP_014227275.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014227275.1;locus_tag=PHA56_RS00425;product=hypothetical protein;protein_id=WP_014227275.1;transl_table=11 NZ_CP116214.1 RefSeq gene 83582 83676 . - . ID=gene-PHA56_RS00430;Name=PHA56_RS00430;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA56_RS00430;old_locus_tag=PHA56_00430 NZ_CP116214.1 tRNAscan-SE tRNA 83582 83676 . - . ID=rna-PHA56_RS00430;Parent=gene-PHA56_RS00430;anticodon=(pos:complement(83640..83642));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS00430;product=tRNA-Sec NZ_CP116214.1 tRNAscan-SE exon 83582 83676 . - . ID=exon-PHA56_RS00430-1;Parent=rna-PHA56_RS00430;anticodon=(pos:complement(83640..83642));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS00430;product=tRNA-Sec NZ_CP116214.1 RefSeq gene 83968 85362 . + . ID=gene-PHA56_RS00435;Name=PHA56_RS00435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS00435;old_locus_tag=PHA56_00435 NZ_CP116214.1 Protein Homology CDS 83968 85362 . + 0 ID=cds-WP_014227274.1;Parent=gene-PHA56_RS00435;Dbxref=Genbank:WP_014227274.1;Name=WP_014227274.1;Ontology_term=GO:0006814,GO:0008643,GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=sodium ion transport|0006814||IEA,carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229486.1;locus_tag=PHA56_RS00435;product=glycoside-pentoside-hexuronide family transporter;protein_id=WP_014227274.1;transl_table=11 NZ_CP116214.1 RefSeq gene 85376 87694 . + . ID=gene-PHA56_RS00440;Name=yicI;gbkey=Gene;gene=yicI;gene_biotype=protein_coding;locus_tag=PHA56_RS00440;old_locus_tag=PHA56_00440 NZ_CP116214.1 Protein Homology CDS 85376 87694 . + 0 ID=cds-WP_119834561.1;Parent=gene-PHA56_RS00440;Dbxref=Genbank:WP_119834561.1;Name=WP_119834561.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=yicI;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229485.1;locus_tag=PHA56_RS00440;product=alpha-xylosidase;protein_id=WP_119834561.1;transl_table=11 NZ_CP116214.1 RefSeq gene 88517 90088 . + . ID=gene-PHA56_RS00445;Name=PHA56_RS00445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS00445;old_locus_tag=PHA56_00445 NZ_CP116214.1 Protein Homology CDS 88517 90088 . + 0 ID=cds-WP_038423872.1;Parent=gene-PHA56_RS00445;Dbxref=Genbank:WP_038423872.1;Name=WP_038423872.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004126745.1;locus_tag=PHA56_RS00445;product=transcription antiterminator;protein_id=WP_038423872.1;transl_table=11 NZ_CP116214.1 RefSeq gene 90099 90569 . + . ID=gene-PHA56_RS00450;Name=PHA56_RS00450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS00450;old_locus_tag=PHA56_00450 NZ_CP116214.1 Protein Homology CDS 90099 90569 . + 0 ID=cds-WP_004126743.1;Parent=gene-PHA56_RS00450;Dbxref=Genbank:WP_004126743.1;Name=WP_004126743.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004126743.1;locus_tag=PHA56_RS00450;product=fructose PTS transporter subunit IIA;protein_id=WP_004126743.1;transl_table=11 NZ_CP116214.1 RefSeq gene 90591 90905 . + . ID=gene-PHA56_RS00455;Name=PHA56_RS00455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS00455;old_locus_tag=PHA56_00455 NZ_CP116214.1 Protein Homology CDS 90591 90905 . + 0 ID=cds-WP_004126741.1;Parent=gene-PHA56_RS00455;Dbxref=Genbank:WP_004126741.1;Name=WP_004126741.1;Ontology_term=GO:0009401,GO:0008982,GO:0022877;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009127717.1;locus_tag=PHA56_RS00455;product=fructose PTS transporter subunit IIB;protein_id=WP_004126741.1;transl_table=11 NZ_CP116214.1 RefSeq gene 90929 92020 . + . ID=gene-PHA56_RS00460;Name=PHA56_RS00460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS00460;old_locus_tag=PHA56_00460 NZ_CP116214.1 Protein Homology CDS 90929 92020 . + 0 ID=cds-WP_014227271.1;Parent=gene-PHA56_RS00460;Dbxref=Genbank:WP_014227271.1;Name=WP_014227271.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122586.1;locus_tag=PHA56_RS00460;product=PTS fructose transporter subunit IIC;protein_id=WP_014227271.1;transl_table=11 NZ_CP116214.1 RefSeq gene 92032 92883 . + . ID=gene-PHA56_RS00465;Name=PHA56_RS00465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS00465;old_locus_tag=PHA56_00465 NZ_CP116214.1 Protein Homology CDS 92032 92883 . + 0 ID=cds-WP_038423871.1;Parent=gene-PHA56_RS00465;Dbxref=Genbank:WP_038423871.1;Name=WP_038423871.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000457126.1;locus_tag=PHA56_RS00465;product=class II fructose-bisphosphate aldolase family protein;protein_id=WP_038423871.1;transl_table=11 NZ_CP116214.1 RefSeq gene 92964 93824 . + . ID=gene-PHA56_RS00470;Name=PHA56_RS00470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS00470;old_locus_tag=PHA56_00470 NZ_CP116214.1 Protein Homology CDS 92964 93824 . + 0 ID=cds-WP_014227269.1;Parent=gene-PHA56_RS00470;Dbxref=Genbank:WP_014227269.1;Name=WP_014227269.1;Ontology_term=GO:0005975,GO:0016832;gbkey=CDS;go_function=aldehyde-lyase activity|0016832||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006687642.1;locus_tag=PHA56_RS00470;product=ketose-bisphosphate aldolase;protein_id=WP_014227269.1;transl_table=11 NZ_CP116214.1 RefSeq gene 93875 94807 . + . ID=gene-PHA56_RS00475;Name=PHA56_RS00475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS00475;old_locus_tag=PHA56_00475 NZ_CP116214.1 Protein Homology CDS 93875 94807 . + 0 ID=cds-WP_032695118.1;Parent=gene-PHA56_RS00475;Dbxref=Genbank:WP_032695118.1;Name=WP_032695118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014227268.1;locus_tag=PHA56_RS00475;product=ROK family protein;protein_id=WP_032695118.1;transl_table=11 NZ_CP116214.1 RefSeq gene 94788 95471 . + . ID=gene-PHA56_RS00480;Name=PHA56_RS00480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS00480;old_locus_tag=PHA56_00480 NZ_CP116214.1 Protein Homology CDS 94788 95471 . + 0 ID=cds-WP_038423870.1;Parent=gene-PHA56_RS00480;Dbxref=Genbank:WP_038423870.1;Name=WP_038423870.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014839803.1;locus_tag=PHA56_RS00480;product=D-lyxose/D-mannose family sugar isomerase;protein_id=WP_038423870.1;transl_table=11 NZ_CP116214.1 RefSeq gene 95621 96352 . + . ID=gene-PHA56_RS00485;Name=PHA56_RS00485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS00485;old_locus_tag=PHA56_00485 NZ_CP116214.1 Protein Homology CDS 95621 96352 . + 0 ID=cds-WP_014227266.1;Parent=gene-PHA56_RS00485;Dbxref=Genbank:WP_014227266.1;Name=WP_014227266.1;Ontology_term=GO:1901135,GO:0097367;gbkey=CDS;go_function=carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017145224.1;locus_tag=PHA56_RS00485;product=SIS domain-containing protein;protein_id=WP_014227266.1;transl_table=11 NZ_CP116214.1 RefSeq gene 96625 98004 . - . ID=gene-PHA56_RS00490;Name=PHA56_RS00490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS00490;old_locus_tag=PHA56_00490 NZ_CP116214.1 Protein Homology CDS 96625 98004 . - 0 ID=cds-WP_014227265.1;Parent=gene-PHA56_RS00490;Dbxref=Genbank:WP_014227265.1;Name=WP_014227265.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229483.1;locus_tag=PHA56_RS00490;product=glycoside hydrolase;protein_id=WP_014227265.1;transl_table=11 NZ_CP116214.1 RefSeq gene 98018 99577 . - . ID=gene-PHA56_RS00495;Name=PHA56_RS00495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS00495;old_locus_tag=PHA56_00495 NZ_CP116214.1 Protein Homology CDS 98018 99577 . - 0 ID=cds-WP_004855529.1;Parent=gene-PHA56_RS00495;Dbxref=Genbank:WP_004855529.1;Name=WP_004855529.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229482.1;locus_tag=PHA56_RS00495;product=PTS transporter subunit EIIC;protein_id=WP_004855529.1;transl_table=11 NZ_CP116214.1 RefSeq gene 99968 101683 . - . ID=gene-PHA56_RS00500;Name=PHA56_RS00500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS00500;old_locus_tag=PHA56_00500 NZ_CP116214.1 Protein Homology CDS 99968 101683 . - 0 ID=cds-WP_014227263.1;Parent=gene-PHA56_RS00500;Dbxref=Genbank:WP_014227263.1;Name=WP_014227263.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014227263.1;locus_tag=PHA56_RS00500;product=AsmA family protein;protein_id=WP_014227263.1;transl_table=11 NZ_CP116214.1 RefSeq gene 101829 103220 . - . ID=gene-PHA56_RS00505;Name=PHA56_RS00505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS00505;old_locus_tag=PHA56_00505 NZ_CP116214.1 Protein Homology CDS 101829 103220 . - 0 ID=cds-WP_004855527.1;Parent=gene-PHA56_RS00505;Dbxref=Genbank:WP_004855527.1;Name=WP_004855527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004855527.1;locus_tag=PHA56_RS00505;product=uracil-xanthine permease family protein;protein_id=WP_004855527.1;transl_table=11 NZ_CP116214.1 RefSeq gene 103509 104711 . + . ID=gene-PHA56_RS00510;Name=gltS;gbkey=Gene;gene=gltS;gene_biotype=protein_coding;locus_tag=PHA56_RS00510;old_locus_tag=PHA56_00510 NZ_CP116214.1 Protein Homology CDS 103509 104711 . + 0 ID=cds-WP_014227262.1;Parent=gene-PHA56_RS00510;Dbxref=Genbank:WP_014227262.1;Name=WP_014227262.1;Ontology_term=GO:0015813,GO:0015501;gbkey=CDS;gene=gltS;go_function=glutamate:sodium symporter activity|0015501||IEA;go_process=L-glutamate transmembrane transport|0015813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229478.1;locus_tag=PHA56_RS00510;product=sodium/glutamate symporter;protein_id=WP_014227262.1;transl_table=11 NZ_CP116214.1 RefSeq gene 105539 107050 . - . ID=gene-PHA56_RS00515;Name=glpK;gbkey=Gene;gene=glpK;gene_biotype=protein_coding;locus_tag=PHA56_RS00515;old_locus_tag=PHA56_00515 NZ_CP116214.1 Protein Homology CDS 105539 107050 . - 0 ID=cds-WP_004126722.1;Parent=gene-PHA56_RS00515;Dbxref=Genbank:WP_004126722.1;Name=WP_004126722.1;Ontology_term=GO:0006071,GO:0004370;gbkey=CDS;gene=glpK;go_function=glycerol kinase activity|0004370||IEA;go_process=glycerol metabolic process|0006071||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229477.1;locus_tag=PHA56_RS00515;product=glycerol kinase GlpK;protein_id=WP_004126722.1;transl_table=11 NZ_CP116214.1 RefSeq gene 107072 107923 . - . ID=gene-PHA56_RS00520;Name=PHA56_RS00520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS00520;old_locus_tag=PHA56_00520 NZ_CP116214.1 Protein Homology CDS 107072 107923 . - 0 ID=cds-WP_004855525.1;Parent=gene-PHA56_RS00520;Dbxref=Genbank:WP_004855525.1;Name=WP_004855525.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229476.1;locus_tag=PHA56_RS00520;product=aquaporin;protein_id=WP_004855525.1;transl_table=11 NZ_CP116214.1 RefSeq gene 108366 108611 . + . ID=gene-PHA56_RS00525;Name=zapB;gbkey=Gene;gene=zapB;gene_biotype=protein_coding;locus_tag=PHA56_RS00525;old_locus_tag=PHA56_00525 NZ_CP116214.1 Protein Homology CDS 108366 108611 . + 0 ID=cds-WP_009652751.1;Parent=gene-PHA56_RS00525;Dbxref=Genbank:WP_009652751.1;Name=WP_009652751.1;gbkey=CDS;gene=zapB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418363.1;locus_tag=PHA56_RS00525;product=septal ring assembly protein ZapB;protein_id=WP_009652751.1;transl_table=11 NZ_CP116214.1 RefSeq gene 108763 109752 . + . ID=gene-PHA56_RS00530;Name=PHA56_RS00530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS00530;old_locus_tag=PHA56_00530 NZ_CP116214.1 Protein Homology CDS 108763 109752 . + 0 ID=cds-WP_004126718.1;Parent=gene-PHA56_RS00530;Dbxref=Genbank:WP_004126718.1;Name=WP_004126718.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133064.1;locus_tag=PHA56_RS00530;product=sulfate ABC transporter substrate-binding protein;protein_id=WP_004126718.1;transl_table=11 NZ_CP116214.1 RefSeq gene 109922 110677 . + . ID=gene-PHA56_RS00535;Name=PHA56_RS00535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS00535;old_locus_tag=PHA56_00535 NZ_CP116214.1 Protein Homology CDS 109922 110677 . + 0 ID=cds-WP_038423868.1;Parent=gene-PHA56_RS00535;Dbxref=Genbank:WP_038423868.1;Name=WP_038423868.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004855523.1;locus_tag=PHA56_RS00535;product=CDP-diacylglycerol diphosphatase;protein_id=WP_038423868.1;transl_table=11 NZ_CP116214.1 RefSeq gene 110751 112055 . + . ID=gene-PHA56_RS00540;Name=PHA56_RS00540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS00540;old_locus_tag=PHA56_00540 NZ_CP116214.1 Protein Homology CDS 110751 112055 . + 0 ID=cds-WP_038423866.1;Parent=gene-PHA56_RS00540;Dbxref=Genbank:WP_038423866.1;Name=WP_038423866.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229472.1;locus_tag=PHA56_RS00540;product=SLC13 family permease;protein_id=WP_038423866.1;transl_table=11 NZ_CP116214.1 RefSeq gene 112150 112917 . - . ID=gene-PHA56_RS00545;Name=tpiA;gbkey=Gene;gene=tpiA;gene_biotype=protein_coding;locus_tag=PHA56_RS00545;old_locus_tag=PHA56_00545 NZ_CP116214.1 Protein Homology CDS 112150 112917 . - 0 ID=cds-WP_004855521.1;Parent=gene-PHA56_RS00545;Dbxref=Genbank:WP_004855521.1;Name=WP_004855521.1;Ontology_term=GO:0006096,GO:0004807;gbkey=CDS;gene=tpiA;go_function=triose-phosphate isomerase activity|0004807||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229471.1;locus_tag=PHA56_RS00545;product=triose-phosphate isomerase;protein_id=WP_004855521.1;transl_table=11 NZ_CP116214.1 RefSeq gene 113026 113625 . - . ID=gene-PHA56_RS00550;Name=PHA56_RS00550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS00550;old_locus_tag=PHA56_00550 NZ_CP116214.1 Protein Homology CDS 113026 113625 . - 0 ID=cds-WP_004855520.1;Parent=gene-PHA56_RS00550;Dbxref=Genbank:WP_004855520.1;Name=WP_004855520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229470.1;locus_tag=PHA56_RS00550;product=DUF1454 family protein;protein_id=WP_004855520.1;transl_table=11 NZ_CP116214.1 RefSeq gene 113738 114166 . + . ID=gene-PHA56_RS00555;Name=PHA56_RS00555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS00555;old_locus_tag=PHA56_00555 NZ_CP116214.1 Protein Homology CDS 113738 114166 . + 0 ID=cds-WP_004126694.1;Parent=gene-PHA56_RS00555;Dbxref=Genbank:WP_004126694.1;Name=WP_004126694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229469.1;locus_tag=PHA56_RS00555;product=DUF805 domain-containing protein;protein_id=WP_004126694.1;transl_table=11 NZ_CP116214.1 RefSeq gene 114167 114913 . - . ID=gene-PHA56_RS00560;Name=fpr;gbkey=Gene;gene=fpr;gene_biotype=protein_coding;locus_tag=PHA56_RS00560;old_locus_tag=PHA56_00560 NZ_CP116214.1 Protein Homology CDS 114167 114913 . - 0 ID=cds-WP_014227260.1;Parent=gene-PHA56_RS00560;Dbxref=Genbank:WP_014227260.1;Name=WP_014227260.1;Ontology_term=GO:0004324;gbkey=CDS;gene=fpr;go_function=ferredoxin-NADP+ reductase activity|0004324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312876.1;locus_tag=PHA56_RS00560;product=ferredoxin--NADP(+) reductase;protein_id=WP_014227260.1;transl_table=11 NZ_CP116214.1 RefSeq gene 115010 116020 . - . ID=gene-PHA56_RS00565;Name=glpX;gbkey=Gene;gene=glpX;gene_biotype=protein_coding;locus_tag=PHA56_RS00565;old_locus_tag=PHA56_00565 NZ_CP116214.1 Protein Homology CDS 115010 116020 . - 0 ID=cds-WP_014227259.1;Parent=gene-PHA56_RS00565;Dbxref=Genbank:WP_014227259.1;Name=WP_014227259.1;Ontology_term=GO:0006094,GO:0042132;gbkey=CDS;gene=glpX;go_function=fructose 1%2C6-bisphosphate 1-phosphatase activity|0042132||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229467.1;locus_tag=PHA56_RS00565;product=class II fructose-bisphosphatase;protein_id=WP_014227259.1;transl_table=11 NZ_CP116214.1 RefSeq gene 116074 118155 . - . ID=gene-PHA56_RS00570;Name=recG;gbkey=Gene;gene=recG;gene_biotype=protein_coding;locus_tag=PHA56_RS00570;old_locus_tag=PHA56_00570 NZ_CP116214.1 Protein Homology CDS 116074 118155 . - 0 ID=cds-WP_032718816.1;Parent=gene-PHA56_RS00570;Dbxref=Genbank:WP_032718816.1;Name=WP_032718816.1;Ontology_term=GO:0006281,GO:0006310,GO:0003676,GO:0003678,GO:0005524;gbkey=CDS;gene=recG;go_function=nucleic acid binding|0003676||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229466.1;locus_tag=PHA56_RS00570;product=ATP-dependent DNA helicase RecG;protein_id=WP_032718816.1;transl_table=11 NZ_CP116214.1 RefSeq gene 118158 118847 . - . ID=gene-PHA56_RS00575;Name=trmH;gbkey=Gene;gene=trmH;gene_biotype=protein_coding;locus_tag=PHA56_RS00575;old_locus_tag=PHA56_00575 NZ_CP116214.1 Protein Homology CDS 118158 118847 . - 0 ID=cds-WP_004855515.1;Parent=gene-PHA56_RS00575;Dbxref=Genbank:WP_004855515.1;Name=WP_004855515.1;Ontology_term=GO:0030488,GO:0008173,GO:0009020;gbkey=CDS;gene=trmH;go_function=RNA methyltransferase activity|0008173||IEA,tRNA (guanosine-2'-O-)-methyltransferase activity|0009020||IEA;go_process=tRNA methylation|0030488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229465.1;locus_tag=PHA56_RS00575;product=tRNA (guanosine(18)-2'-O)-methyltransferase TrmH;protein_id=WP_004855515.1;transl_table=11 NZ_CP116214.1 RefSeq gene 119012 121132 . - . ID=gene-PHA56_RS00580;Name=spoT;gbkey=Gene;gene=spoT;gene_biotype=protein_coding;locus_tag=PHA56_RS00580;old_locus_tag=PHA56_00580 NZ_CP116214.1 Protein Homology CDS 119012 121132 . - 0 ID=cds-WP_004855514.1;Parent=gene-PHA56_RS00580;Dbxref=Genbank:WP_004855514.1;Name=WP_004855514.1;Ontology_term=GO:0015969,GO:0008728,GO:0008893;gbkey=CDS;gene=spoT;go_function=GTP diphosphokinase activity|0008728||IEA,guanosine-3'%2C5'-bis(diphosphate) 3'-diphosphatase activity|0008893||IEA;go_process=guanosine tetraphosphate metabolic process|0015969||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229464.1;locus_tag=PHA56_RS00580;product=bifunctional GTP diphosphokinase/guanosine-3'%2C5'-bis pyrophosphate 3'-pyrophosphohydrolase;protein_id=WP_004855514.1;transl_table=11 NZ_CP116214.1 RefSeq gene 121151 121426 . - . ID=gene-PHA56_RS00585;Name=rpoZ;gbkey=Gene;gene=rpoZ;gene_biotype=protein_coding;locus_tag=PHA56_RS00585;old_locus_tag=PHA56_00585 NZ_CP116214.1 Protein Homology CDS 121151 121426 . - 0 ID=cds-WP_004106927.1;Parent=gene-PHA56_RS00585;Dbxref=Genbank:WP_004106927.1;Name=WP_004106927.1;Ontology_term=GO:0006351,GO:0003899,GO:0000345;gbkey=CDS;gene=rpoZ;go_component=cytosolic DNA-directed RNA polymerase complex|0000345||IEA;go_function=DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013511051.1;locus_tag=PHA56_RS00585;product=DNA-directed RNA polymerase subunit omega;protein_id=WP_004106927.1;transl_table=11 NZ_CP116214.1 RefSeq gene 121481 122104 . - . ID=gene-PHA56_RS00590;Name=gmk;gbkey=Gene;gene=gmk;gene_biotype=protein_coding;locus_tag=PHA56_RS00590;old_locus_tag=PHA56_00590 NZ_CP116214.1 Protein Homology CDS 121481 122104 . - 0 ID=cds-WP_004106926.1;Parent=gene-PHA56_RS00590;Dbxref=Genbank:WP_004106926.1;Name=WP_004106926.1;Ontology_term=GO:0015949,GO:0004385;gbkey=CDS;gene=gmk;go_function=guanylate kinase activity|0004385||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000046969.1;locus_tag=PHA56_RS00590;product=guanylate kinase;protein_id=WP_004106926.1;transl_table=11 NZ_CP116214.1 RefSeq gene 122362 124038 . + . ID=gene-PHA56_RS00595;Name=ligB;gbkey=Gene;gene=ligB;gene_biotype=protein_coding;locus_tag=PHA56_RS00595;old_locus_tag=PHA56_00595 NZ_CP116214.1 Protein Homology CDS 122362 124038 . + 0 ID=cds-WP_038423865.1;Parent=gene-PHA56_RS00595;Dbxref=Genbank:WP_038423865.1;Name=WP_038423865.1;Ontology_term=GO:0006260,GO:0006281,GO:0003911;gbkey=CDS;gene=ligB;go_function=DNA ligase (NAD+) activity|0003911||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012540299.1;locus_tag=PHA56_RS00595;product=NAD-dependent DNA ligase LigB;protein_id=WP_038423865.1;transl_table=11 NZ_CP116214.1 RefSeq gene 124044 124661 . - . ID=gene-PHA56_RS00600;Name=PHA56_RS00600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS00600;old_locus_tag=PHA56_00600 NZ_CP116214.1 Protein Homology CDS 124044 124661 . - 0 ID=cds-WP_014839797.1;Parent=gene-PHA56_RS00600;Dbxref=Genbank:WP_014839797.1;Name=WP_014839797.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229460.1;locus_tag=PHA56_RS00600;product=trimeric intracellular cation channel family protein;protein_id=WP_014839797.1;transl_table=11 NZ_CP116214.1 RefSeq gene 124936 126195 . + . ID=gene-PHA56_RS00605;Name=PHA56_RS00605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS00605;old_locus_tag=PHA56_00605 NZ_CP116214.1 Protein Homology CDS 124936 126195 . + 0 ID=cds-WP_038423864.1;Parent=gene-PHA56_RS00605;Dbxref=Genbank:WP_038423864.1;Name=WP_038423864.1;Ontology_term=GO:0006821,GO:0055085,GO:0005247,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=voltage-gated chloride channel activity|0005247||IEA;go_process=chloride transport|0006821||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017145236.1;locus_tag=PHA56_RS00605;product=chloride channel protein;protein_id=WP_038423864.1;transl_table=11 NZ_CP116214.1 RefSeq gene 126269 127132 . - . ID=gene-PHA56_RS00610;Name=PHA56_RS00610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS00610;old_locus_tag=PHA56_00610 NZ_CP116214.1 Protein Homology CDS 126269 127132 . - 0 ID=cds-WP_004855510.1;Parent=gene-PHA56_RS00610;Dbxref=Genbank:WP_004855510.1;Name=WP_004855510.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122606.1;locus_tag=PHA56_RS00610;product=YicC family protein;protein_id=WP_004855510.1;transl_table=11 NZ_CP116214.1 RefSeq gene 127256 127972 . + . ID=gene-PHA56_RS00615;Name=rph;gbkey=Gene;gene=rph;gene_biotype=protein_coding;locus_tag=PHA56_RS00615;old_locus_tag=PHA56_00615 NZ_CP116214.1 Protein Homology CDS 127256 127972 . + 0 ID=cds-WP_004106921.1;Parent=gene-PHA56_RS00615;Dbxref=Genbank:WP_004106921.1;Name=WP_004106921.1;Ontology_term=GO:0008033,GO:0004549;gbkey=CDS;gene=rph;go_function=tRNA-specific ribonuclease activity|0004549||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006803115.1;locus_tag=PHA56_RS00615;product=ribonuclease PH;protein_id=WP_004106921.1;transl_table=11 NZ_CP116214.1 RefSeq gene 128038 128679 . + . ID=gene-PHA56_RS00620;Name=pyrE;gbkey=Gene;gene=pyrE;gene_biotype=protein_coding;locus_tag=PHA56_RS00620;old_locus_tag=PHA56_00620 NZ_CP116214.1 Protein Homology CDS 128038 128679 . + 0 ID=cds-WP_004855508.1;Parent=gene-PHA56_RS00620;Dbxref=Genbank:WP_004855508.1;Name=WP_004855508.1;Ontology_term=GO:0009220,GO:0004588;gbkey=CDS;gene=pyrE;go_function=orotate phosphoribosyltransferase activity|0004588||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229445.1;locus_tag=PHA56_RS00620;product=orotate phosphoribosyltransferase;protein_id=WP_004855508.1;transl_table=11 NZ_CP116214.1 RefSeq gene 128832 129428 . - . ID=gene-PHA56_RS00625;Name=slmA;gbkey=Gene;gene=slmA;gene_biotype=protein_coding;locus_tag=PHA56_RS00625;old_locus_tag=PHA56_00625 NZ_CP116214.1 Protein Homology CDS 128832 129428 . - 0 ID=cds-WP_004855507.1;Parent=gene-PHA56_RS00625;Dbxref=Genbank:WP_004855507.1;Name=WP_004855507.1;Ontology_term=GO:0010974,GO:0003677;gbkey=CDS;gene=slmA;go_function=DNA binding|0003677||IEA;go_process=negative regulation of division septum assembly|0010974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000818604.1;locus_tag=PHA56_RS00625;product=nucleoid occlusion factor SlmA;protein_id=WP_004855507.1;transl_table=11 NZ_CP116214.1 RefSeq gene 129606 130064 . - . ID=gene-PHA56_RS00630;Name=dut;gbkey=Gene;gene=dut;gene_biotype=protein_coding;locus_tag=PHA56_RS00630;old_locus_tag=PHA56_00630 NZ_CP116214.1 Protein Homology CDS 129606 130064 . - 0 ID=cds-WP_004855506.1;Parent=gene-PHA56_RS00630;Dbxref=Genbank:WP_004855506.1;Name=WP_004855506.1;Ontology_term=GO:0006226,GO:0046081,GO:0000287,GO:0004170;gbkey=CDS;gene=dut;go_function=magnesium ion binding|0000287||IEA,dUTP diphosphatase activity|0004170||IEA;go_process=dUMP biosynthetic process|0006226||IEA,dUTP catabolic process|0046081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000976070.1;locus_tag=PHA56_RS00630;product=dUTP diphosphatase;protein_id=WP_004855506.1;transl_table=11 NZ_CP116214.1 RefSeq gene 130042 131253 . - . ID=gene-PHA56_RS00635;Name=coaBC;gbkey=Gene;gene=coaBC;gene_biotype=protein_coding;locus_tag=PHA56_RS00635;old_locus_tag=PHA56_00635 NZ_CP116214.1 Protein Homology CDS 130042 131253 . - 0 ID=cds-WP_071889477.1;Parent=gene-PHA56_RS00635;Dbxref=Genbank:WP_071889477.1;Name=WP_071889477.1;Ontology_term=GO:0015937,GO:0015939,GO:0004632,GO:0004633;gbkey=CDS;gene=coaBC;go_function=phosphopantothenate--cysteine ligase activity|0004632||IEA,phosphopantothenoylcysteine decarboxylase activity|0004633||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA,pantothenate metabolic process|0015939||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418096.4;locus_tag=PHA56_RS00635;product=bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC;protein_id=WP_071889477.1;transl_table=11 NZ_CP116214.1 RefSeq gene 131429 132094 . + . ID=gene-PHA56_RS00640;Name=radC;gbkey=Gene;gene=radC;gene_biotype=protein_coding;locus_tag=PHA56_RS00640;old_locus_tag=PHA56_00640 NZ_CP116214.1 Protein Homology CDS 131429 132094 . + 0 ID=cds-WP_004126657.1;Parent=gene-PHA56_RS00640;Dbxref=Genbank:WP_004126657.1;Name=WP_004126657.1;Ontology_term=GO:0006281,GO:0003677;gbkey=CDS;gene=radC;go_function=DNA binding|0003677||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229441.1;locus_tag=PHA56_RS00640;product=DNA repair protein RadC;protein_id=WP_004126657.1;transl_table=11 NZ_CP116214.1 RefSeq gene 132311 132547 . + . ID=gene-PHA56_RS00645;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=PHA56_RS00645;old_locus_tag=PHA56_00645 NZ_CP116214.1 Protein Homology CDS 132311 132547 . + 0 ID=cds-WP_002436699.1;Parent=gene-PHA56_RS00645;Dbxref=Genbank:WP_002436699.1;Name=WP_002436699.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rpmB;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008457442.1;locus_tag=PHA56_RS00645;product=50S ribosomal protein L28;protein_id=WP_002436699.1;transl_table=11 NZ_CP116214.1 RefSeq gene 132568 132735 . + . ID=gene-PHA56_RS00650;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=PHA56_RS00650;old_locus_tag=PHA56_00650 NZ_CP116214.1 Protein Homology CDS 132568 132735 . + 0 ID=cds-WP_003024094.1;Parent=gene-PHA56_RS00650;Dbxref=Genbank:WP_003024094.1;Name=WP_003024094.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmG;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010847629.1;locus_tag=PHA56_RS00650;product=50S ribosomal protein L33;protein_id=WP_003024094.1;transl_table=11 NZ_CP116214.1 RefSeq gene 132935 133744 . + . ID=gene-PHA56_RS00655;Name=mutM;gbkey=Gene;gene=mutM;gene_biotype=protein_coding;locus_tag=PHA56_RS00655;old_locus_tag=PHA56_00655 NZ_CP116214.1 Protein Homology CDS 132935 133744 . + 0 ID=cds-WP_014227251.1;Parent=gene-PHA56_RS00655;Dbxref=Genbank:WP_014227251.1;Name=WP_014227251.1;Ontology_term=GO:0006281,GO:0006284,GO:0003676,GO:0003684,GO:0003906,GO:0008270,GO:0008534,GO:0016799,GO:0019104;gbkey=CDS;gene=mutM;go_function=nucleic acid binding|0003676||IEA,damaged DNA binding|0003684||IEA,DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA,zinc ion binding|0008270||IEA,oxidized purine nucleobase lesion DNA N-glycosylase activity|0008534||IEA,hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA,DNA N-glycosylase activity|0019104||IEA;go_process=DNA repair|0006281||IEA,base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229438.1;locus_tag=PHA56_RS00655;product=bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase;protein_id=WP_014227251.1;transl_table=11 NZ_CP116214.1 RefSeq gene 133868 134344 . - . ID=gene-PHA56_RS00660;Name=coaD;gbkey=Gene;gene=coaD;gene_biotype=protein_coding;locus_tag=PHA56_RS00660;old_locus_tag=PHA56_00660 NZ_CP116214.1 Protein Homology CDS 133868 134344 . - 0 ID=cds-WP_025107819.1;Parent=gene-PHA56_RS00660;Dbxref=Genbank:WP_025107819.1;Name=WP_025107819.1;Ontology_term=GO:0015937,GO:0004595;gbkey=CDS;gene=coaD;go_function=pantetheine-phosphate adenylyltransferase activity|0004595||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004106901.1;locus_tag=PHA56_RS00660;product=pantetheine-phosphate adenylyltransferase;protein_id=WP_025107819.1;transl_table=11 NZ_CP116214.1 RefSeq gene 134341 135117 . - . ID=gene-PHA56_RS00665;Name=PHA56_RS00665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS00665;old_locus_tag=PHA56_00665 NZ_CP116214.1 Protein Homology CDS 134341 135117 . - 0 ID=cds-WP_046876802.1;Parent=gene-PHA56_RS00665;Dbxref=Genbank:WP_046876802.1;Name=WP_046876802.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004855501.1;locus_tag=PHA56_RS00665;product=glycosyltransferase family 2 protein;protein_id=WP_046876802.1;transl_table=11 NZ_CP116214.1 RefSeq gene 135117 136391 . - . ID=gene-PHA56_RS00670;Name=waaA;gbkey=Gene;gene=waaA;gene_biotype=protein_coding;locus_tag=PHA56_RS00670;old_locus_tag=PHA56_00670 NZ_CP116214.1 Protein Homology CDS 135117 136391 . - 0 ID=cds-WP_014227249.1;Parent=gene-PHA56_RS00670;Dbxref=Genbank:WP_014227249.1;Name=WP_014227249.1;Ontology_term=GO:0016740;gbkey=CDS;gene=waaA;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229435.1;locus_tag=PHA56_RS00670;product=lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase;protein_id=WP_014227249.1;transl_table=11 NZ_CP116214.1 RefSeq gene 136484 137473 . - . ID=gene-PHA56_RS00675;Name=PHA56_RS00675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS00675;old_locus_tag=PHA56_00675 NZ_CP116214.1 Protein Homology CDS 136484 137473 . - 0 ID=cds-WP_014839791.1;Parent=gene-PHA56_RS00675;Dbxref=Genbank:WP_014839791.1;Name=WP_014839791.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004126630.1;locus_tag=PHA56_RS00675;product=glycosyltransferase;protein_id=WP_014839791.1;transl_table=11 NZ_CP116214.1 RefSeq gene 137504 138598 . - . ID=gene-PHA56_RS00680;Name=PHA56_RS00680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS00680;old_locus_tag=PHA56_00680 NZ_CP116214.1 Protein Homology CDS 137504 138598 . - 0 ID=cds-WP_014227247.1;Parent=gene-PHA56_RS00680;Dbxref=Genbank:WP_014227247.1;Name=WP_014227247.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004106890.1;locus_tag=PHA56_RS00680;product=glycosyltransferase;protein_id=WP_014227247.1;transl_table=11 NZ_CP116214.1 RefSeq gene 138601 139728 . - . ID=gene-PHA56_RS00685;Name=PHA56_RS00685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS00685;old_locus_tag=PHA56_00685 NZ_CP116214.1 Protein Homology CDS 138601 139728 . - 0 ID=cds-WP_014227246.1;Parent=gene-PHA56_RS00685;Dbxref=Genbank:WP_014227246.1;Name=WP_014227246.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229432.1;locus_tag=PHA56_RS00685;product=glycosyltransferase family 4 protein;protein_id=WP_014227246.1;transl_table=11 NZ_CP116214.1 RefSeq gene 139725 140801 . - . ID=gene-PHA56_RS00690;Name=rfaQ;gbkey=Gene;gene=rfaQ;gene_biotype=protein_coding;locus_tag=PHA56_RS00690;old_locus_tag=PHA56_00690 NZ_CP116214.1 Protein Homology CDS 139725 140801 . - 0 ID=cds-WP_014227245.1;Parent=gene-PHA56_RS00690;Dbxref=Genbank:WP_014227245.1;Name=WP_014227245.1;Ontology_term=GO:0016757;gbkey=CDS;gene=rfaQ;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229431.1;locus_tag=PHA56_RS00690;product=putative lipopolysaccharide heptosyltransferase III;protein_id=WP_014227245.1;transl_table=11 NZ_CP116214.1 RefSeq gene 140913 141875 . + . ID=gene-PHA56_RS00695;Name=PHA56_RS00695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS00695;old_locus_tag=PHA56_00695 NZ_CP116214.1 Protein Homology CDS 140913 141875 . + 0 ID=cds-WP_014227244.1;Parent=gene-PHA56_RS00695;Dbxref=Genbank:WP_014227244.1;Name=WP_014227244.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229430.1;locus_tag=PHA56_RS00695;product=polysaccharide deacetylase family protein;protein_id=WP_014227244.1;transl_table=11 NZ_CP116214.1 RefSeq gene 141897 142979 . + . ID=gene-PHA56_RS00700;Name=PHA56_RS00700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS00700;old_locus_tag=PHA56_00700 NZ_CP116214.1 Protein Homology CDS 141897 142979 . + 0 ID=cds-WP_014227243.1;Parent=gene-PHA56_RS00700;Dbxref=Genbank:WP_014227243.1;Name=WP_014227243.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004126617.1;locus_tag=PHA56_RS00700;product=glycosyltransferase family 9 protein;protein_id=WP_014227243.1;transl_table=11 NZ_CP116214.1 RefSeq gene 143006 144172 . - . ID=gene-PHA56_RS00705;Name=PHA56_RS00705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS00705;old_locus_tag=PHA56_00705 NZ_CP116214.1 Protein Homology CDS 143006 144172 . - 0 ID=cds-WP_014227242.1;Parent=gene-PHA56_RS00705;Dbxref=Genbank:WP_014227242.1;Name=WP_014227242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014839788.1;locus_tag=PHA56_RS00705;product=O-antigen ligase family protein;protein_id=WP_014227242.1;transl_table=11 NZ_CP116214.1 RefSeq gene 144150 145058 . - . ID=gene-PHA56_RS00710;Name=PHA56_RS00710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS00710;old_locus_tag=PHA56_00710 NZ_CP116214.1 Protein Homology CDS 144150 145058 . - 0 ID=cds-WP_014227241.1;Parent=gene-PHA56_RS00710;Dbxref=Genbank:WP_014227241.1;Name=WP_014227241.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229425.1;locus_tag=PHA56_RS00710;product=sugar glycosyltransferase;protein_id=WP_014227241.1;transl_table=11 NZ_CP116214.1 RefSeq gene 145058 146029 . - . ID=gene-PHA56_RS00715;Name=rfaC;gbkey=Gene;gene=rfaC;gene_biotype=protein_coding;locus_tag=PHA56_RS00715;old_locus_tag=PHA56_00715 NZ_CP116214.1 Protein Homology CDS 145058 146029 . - 0 ID=cds-WP_009652757.1;Parent=gene-PHA56_RS00715;Dbxref=Genbank:WP_009652757.1;Name=WP_009652757.1;Ontology_term=GO:0009244,GO:0008920;gbkey=CDS;gene=rfaC;go_function=lipopolysaccharide heptosyltransferase activity|0008920||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009652757.1;locus_tag=PHA56_RS00715;product=lipopolysaccharide heptosyltransferase RfaC;protein_id=WP_009652757.1;transl_table=11 NZ_CP116214.1 RefSeq gene 146033 147091 . - . ID=gene-PHA56_RS00720;Name=rfaF;gbkey=Gene;gene=rfaF;gene_biotype=protein_coding;locus_tag=PHA56_RS00720;old_locus_tag=PHA56_00720 NZ_CP116214.1 Protein Homology CDS 146033 147091 . - 0 ID=cds-WP_014227240.1;Parent=gene-PHA56_RS00720;Dbxref=Genbank:WP_014227240.1;Name=WP_014227240.1;Ontology_term=GO:0009103,GO:0016757;gbkey=CDS;gene=rfaF;go_function=glycosyltransferase activity|0016757||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709400.1;locus_tag=PHA56_RS00720;product=ADP-heptose--LPS heptosyltransferase RfaF;protein_id=WP_014227240.1;transl_table=11 NZ_CP116214.1 RefSeq gene 147207 148151 . - . ID=gene-PHA56_RS00725;Name=rfaD;gbkey=Gene;gene=rfaD;gene_biotype=protein_coding;locus_tag=PHA56_RS00725;old_locus_tag=PHA56_00725 NZ_CP116214.1 Protein Homology CDS 147207 148151 . - 0 ID=cds-WP_014227239.1;Parent=gene-PHA56_RS00725;Dbxref=Genbank:WP_014227239.1;Name=WP_014227239.1;Ontology_term=GO:0005975,GO:0008712;gbkey=CDS;gene=rfaD;go_function=ADP-glyceromanno-heptose 6-epimerase activity|0008712||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014227239.1;locus_tag=PHA56_RS00725;product=ADP-glyceromanno-heptose 6-epimerase;protein_id=WP_014227239.1;transl_table=11 NZ_CP116214.1 RefSeq gene 148366 149559 . + . ID=gene-PHA56_RS00730;Name=kbl;gbkey=Gene;gene=kbl;gene_biotype=protein_coding;locus_tag=PHA56_RS00730;old_locus_tag=PHA56_00730 NZ_CP116214.1 Protein Homology CDS 148366 149559 . + 0 ID=cds-WP_014227238.1;Parent=gene-PHA56_RS00730;Dbxref=Genbank:WP_014227238.1;Name=WP_014227238.1;Ontology_term=GO:0006567,GO:0008890;gbkey=CDS;gene=kbl;go_function=glycine C-acetyltransferase activity|0008890||IEA;go_process=threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020239151.1;locus_tag=PHA56_RS00730;product=glycine C-acetyltransferase;protein_id=WP_014227238.1;transl_table=11 NZ_CP116214.1 RefSeq gene 149569 150594 . + . ID=gene-PHA56_RS00735;Name=tdh;gbkey=Gene;gene=tdh;gene_biotype=protein_coding;locus_tag=PHA56_RS00735;old_locus_tag=PHA56_00735 NZ_CP116214.1 Protein Homology CDS 149569 150594 . + 0 ID=cds-WP_004855475.1;Parent=gene-PHA56_RS00735;Dbxref=Genbank:WP_004855475.1;Name=WP_004855475.1;Ontology_term=GO:0006567,GO:0008743;gbkey=CDS;gene=tdh;go_function=L-threonine 3-dehydrogenase activity|0008743||IEA;go_process=threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120462.1;locus_tag=PHA56_RS00735;product=L-threonine 3-dehydrogenase;protein_id=WP_004855475.1;transl_table=11 NZ_CP116214.1 RefSeq gene 150756 151553 . + . ID=gene-PHA56_RS00740;Name=PHA56_RS00740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS00740;old_locus_tag=PHA56_00740 NZ_CP116214.1 Protein Homology CDS 150756 151553 . + 0 ID=cds-WP_014227237.1;Parent=gene-PHA56_RS00740;Dbxref=Genbank:WP_014227237.1;Name=WP_014227237.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004106861.1;locus_tag=PHA56_RS00740;product=glycosyltransferase family 2 protein;protein_id=WP_014227237.1;transl_table=11 NZ_CP116214.1 RefSeq gene 151550 152485 . - . ID=gene-PHA56_RS00745;Name=PHA56_RS00745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS00745;old_locus_tag=PHA56_00745 NZ_CP116214.1 Protein Homology CDS 151550 152485 . - 0 ID=cds-WP_038423860.1;Parent=gene-PHA56_RS00745;Dbxref=Genbank:WP_038423860.1;Name=WP_038423860.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229418.1;locus_tag=PHA56_RS00745;product=divergent polysaccharide deacetylase family protein;protein_id=WP_038423860.1;transl_table=11 NZ_CP116214.1 RefSeq gene 152489 153760 . - . ID=gene-PHA56_RS00750;Name=envC;gbkey=Gene;gene=envC;gene_biotype=protein_coding;locus_tag=PHA56_RS00750;old_locus_tag=PHA56_00750 NZ_CP116214.1 Protein Homology CDS 152489 153760 . - 0 ID=cds-WP_025107808.1;Parent=gene-PHA56_RS00750;Dbxref=Genbank:WP_025107808.1;Name=WP_025107808.1;gbkey=CDS;gene=envC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229417.1;locus_tag=PHA56_RS00750;product=murein hydrolase activator EnvC;protein_id=WP_025107808.1;transl_table=11 NZ_CP116214.1 RefSeq gene 153770 155314 . - . ID=gene-PHA56_RS00755;Name=gpmM;gbkey=Gene;gene=gpmM;gene_biotype=protein_coding;gene_synonym=pgmI;locus_tag=PHA56_RS00755;old_locus_tag=PHA56_00755 NZ_CP116214.1 Protein Homology CDS 153770 155314 . - 0 ID=cds-WP_014839784.1;Parent=gene-PHA56_RS00755;Dbxref=Genbank:WP_014839784.1;Name=WP_014839784.1;Ontology_term=GO:0006007,GO:0004619;gbkey=CDS;gene=gpmM;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glucose catabolic process|0006007||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229416.1;locus_tag=PHA56_RS00755;product=2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase;protein_id=WP_014839784.1;transl_table=11 NZ_CP116214.1 RefSeq gene 155560 155991 . + . ID=gene-PHA56_RS00760;Name=PHA56_RS00760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS00760;old_locus_tag=PHA56_00760 NZ_CP116214.1 Protein Homology CDS 155560 155991 . + 0 ID=cds-WP_004126582.1;Parent=gene-PHA56_RS00760;Dbxref=Genbank:WP_004126582.1;Name=WP_004126582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229415.1;locus_tag=PHA56_RS00760;product=rhodanese-like domain-containing protein;protein_id=WP_004126582.1;transl_table=11 NZ_CP116214.1 RefSeq gene 156103 156354 . + . ID=gene-PHA56_RS00765;Name=grxC;gbkey=Gene;gene=grxC;gene_biotype=protein_coding;locus_tag=PHA56_RS00765;old_locus_tag=PHA56_00765 NZ_CP116214.1 Protein Homology CDS 156103 156354 . + 0 ID=cds-WP_004106850.1;Parent=gene-PHA56_RS00765;Dbxref=Genbank:WP_004106850.1;Name=WP_004106850.1;gbkey=CDS;gene=grxC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229414.1;locus_tag=PHA56_RS00765;product=glutaredoxin 3;protein_id=WP_004106850.1;transl_table=11 NZ_CP116214.1 RefSeq gene 156414 156881 . + . ID=gene-PHA56_RS00770;Name=secB;gbkey=Gene;gene=secB;gene_biotype=protein_coding;locus_tag=PHA56_RS00770;old_locus_tag=PHA56_00770 NZ_CP116214.1 Protein Homology CDS 156414 156881 . + 0 ID=cds-WP_004106849.1;Parent=gene-PHA56_RS00770;Dbxref=Genbank:WP_004106849.1;Name=WP_004106849.1;gbkey=CDS;gene=secB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015369180.1;locus_tag=PHA56_RS00770;product=protein-export chaperone SecB;protein_id=WP_004106849.1;transl_table=11 NZ_CP116214.1 RefSeq gene 156881 157897 . + . ID=gene-PHA56_RS00775;Name=gpsA;gbkey=Gene;gene=gpsA;gene_biotype=protein_coding;locus_tag=PHA56_RS00775;old_locus_tag=PHA56_00775 NZ_CP116214.1 Protein Homology CDS 156881 157897 . + 0 ID=cds-WP_004855462.1;Parent=gene-PHA56_RS00775;Dbxref=Genbank:WP_004855462.1;Name=WP_004855462.1;Ontology_term=GO:0006072,GO:0047952;gbkey=CDS;gene=gpsA;go_function=glycerol-3-phosphate dehydrogenase [NAD(P)+] activity|0047952||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004868903.1;locus_tag=PHA56_RS00775;product=NAD(P)H-dependent glycerol-3-phosphate dehydrogenase;protein_id=WP_004855462.1;transl_table=11 NZ_CP116214.1 RefSeq gene 157978 158799 . + . ID=gene-PHA56_RS00780;Name=cysE;gbkey=Gene;gene=cysE;gene_biotype=protein_coding;locus_tag=PHA56_RS00780;old_locus_tag=PHA56_00780 NZ_CP116214.1 Protein Homology CDS 157978 158799 . + 0 ID=cds-WP_004106845.1;Parent=gene-PHA56_RS00780;Dbxref=Genbank:WP_004106845.1;Name=WP_004106845.1;Ontology_term=GO:0006535,GO:0009001;gbkey=CDS;gene=cysE;go_function=serine O-acetyltransferase activity|0009001||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001112113.1;locus_tag=PHA56_RS00780;product=serine O-acetyltransferase;protein_id=WP_004106845.1;transl_table=11 NZ_CP116214.1 RefSeq gene 158904 159377 . - . ID=gene-PHA56_RS00785;Name=trmL;gbkey=Gene;gene=trmL;gene_biotype=protein_coding;locus_tag=PHA56_RS00785;old_locus_tag=PHA56_00785 NZ_CP116214.1 Protein Homology CDS 158904 159377 . - 0 ID=cds-WP_014227233.1;Parent=gene-PHA56_RS00785;Dbxref=Genbank:WP_014227233.1;Name=WP_014227233.1;Ontology_term=GO:0001510,GO:0008173;gbkey=CDS;gene=trmL;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA methylation|0001510||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000932331.1;locus_tag=PHA56_RS00785;product=tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL;protein_id=WP_014227233.1;transl_table=11 NZ_CP116214.1 RefSeq gene 159504 160739 . - . ID=gene-PHA56_RS00790;Name=lldD;gbkey=Gene;gene=lldD;gene_biotype=protein_coding;locus_tag=PHA56_RS00790;old_locus_tag=PHA56_00790 NZ_CP116214.1 Protein Homology CDS 159504 160739 . - 0 ID=cds-WP_038423858.1;Parent=gene-PHA56_RS00790;Dbxref=Genbank:WP_038423858.1;Name=WP_038423858.1;Ontology_term=GO:0006089,GO:0004457,GO:0010181;gbkey=CDS;gene=lldD;go_function=lactate dehydrogenase activity|0004457||IEA,FMN binding|0010181||IEA;go_process=lactate metabolic process|0006089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004126573.1;locus_tag=PHA56_RS00790;product=FMN-dependent L-lactate dehydrogenase LldD;protein_id=WP_038423858.1;transl_table=11 NZ_CP116214.1 RefSeq gene 160739 161512 . - . ID=gene-PHA56_RS00795;Name=lldR;gbkey=Gene;gene=lldR;gene_biotype=protein_coding;locus_tag=PHA56_RS00795;old_locus_tag=PHA56_00795 NZ_CP116214.1 Protein Homology CDS 160739 161512 . - 0 ID=cds-WP_014227231.1;Parent=gene-PHA56_RS00795;Dbxref=Genbank:WP_014227231.1;Name=WP_014227231.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=lldR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004126569.1;locus_tag=PHA56_RS00795;product=transcriptional regulator LldR;protein_id=WP_014227231.1;transl_table=11 NZ_CP116214.1 RefSeq gene 161509 163164 . - . ID=gene-PHA56_RS00800;Name=lldP;gbkey=Gene;gene=lldP;gene_biotype=protein_coding;locus_tag=PHA56_RS00800;old_locus_tag=PHA56_00800 NZ_CP116214.1 Protein Homology CDS 161509 163164 . - 0 ID=cds-WP_038423856.1;Parent=gene-PHA56_RS00800;Dbxref=Genbank:WP_038423856.1;Name=WP_038423856.1;Ontology_term=GO:0015727,GO:0015129,GO:0005886;gbkey=CDS;gene=lldP;go_component=plasma membrane|0005886||IEA;go_function=lactate transmembrane transporter activity|0015129||IEA;go_process=lactate transport|0015727||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229407.1;locus_tag=PHA56_RS00800;product=L-lactate permease;protein_id=WP_038423856.1;transl_table=11 NZ_CP116214.1 RefSeq gene 163749 164111 . - . ID=gene-PHA56_RS00805;Name=PHA56_RS00805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS00805;old_locus_tag=PHA56_00805 NZ_CP116214.1 Protein Homology CDS 163749 164111 . - 0 ID=cds-WP_014227229.1;Parent=gene-PHA56_RS00805;Dbxref=Genbank:WP_014227229.1;Name=WP_014227229.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312505.1;locus_tag=PHA56_RS00805;product=YibL family ribosome-associated protein;protein_id=WP_014227229.1;transl_table=11 NZ_CP116214.1 RefSeq gene 164387 164611 . + . ID=gene-PHA56_RS00810;Name=PHA56_RS00810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS00810;old_locus_tag=PHA56_00810 NZ_CP116214.1 Protein Homology CDS 164387 164611 . + 0 ID=cds-WP_004855451.1;Parent=gene-PHA56_RS00810;Dbxref=Genbank:WP_004855451.1;Name=WP_004855451.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229405.1;locus_tag=PHA56_RS00810;product=hypothetical protein;protein_id=WP_004855451.1;transl_table=11 NZ_CP116214.1 RefSeq gene 164600 165196 . - . ID=gene-PHA56_RS00815;Name=mtlR;gbkey=Gene;gene=mtlR;gene_biotype=protein_coding;locus_tag=PHA56_RS00815;old_locus_tag=PHA56_00815 NZ_CP116214.1 Protein Homology CDS 164600 165196 . - 0 ID=cds-WP_014227228.1;Parent=gene-PHA56_RS00815;Dbxref=Genbank:WP_014227228.1;Name=WP_014227228.1;gbkey=CDS;gene=mtlR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004145240.1;locus_tag=PHA56_RS00815;product=mannitol operon repressor MtlR;protein_id=WP_014227228.1;transl_table=11 NZ_CP116214.1 RefSeq gene 165193 166341 . - . ID=gene-PHA56_RS00820;Name=mtlD;gbkey=Gene;gene=mtlD;gene_biotype=protein_coding;locus_tag=PHA56_RS00820;old_locus_tag=PHA56_00820 NZ_CP116214.1 Protein Homology CDS 165193 166341 . - 0 ID=cds-WP_014839780.1;Parent=gene-PHA56_RS00820;Dbxref=Genbank:WP_014839780.1;Name=WP_014839780.1;Ontology_term=GO:0019594,GO:0008926;gbkey=CDS;gene=mtlD;go_function=mannitol-1-phosphate 5-dehydrogenase activity|0008926||IEA;go_process=mannitol metabolic process|0019594||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229403.1;locus_tag=PHA56_RS00820;product=mannitol-1-phosphate 5-dehydrogenase;protein_id=WP_014839780.1;transl_table=11 NZ_CP116214.1 RefSeq gene 166469 168379 . - . ID=gene-PHA56_RS00825;Name=mtlA;gbkey=Gene;gene=mtlA;gene_biotype=protein_coding;locus_tag=PHA56_RS00825;old_locus_tag=PHA56_00825 NZ_CP116214.1 Protein Homology CDS 166469 168379 . - 0 ID=cds-WP_004855446.1;Parent=gene-PHA56_RS00825;Dbxref=Genbank:WP_004855446.1;Name=WP_004855446.1;gbkey=CDS;gene=mtlA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004106823.1;locus_tag=PHA56_RS00825;product=PTS mannitol transporter subunit IICBA;protein_id=WP_004855446.1;transl_table=11 NZ_CP116214.1 RefSeq gene 168915 169286 . + . ID=gene-PHA56_RS00830;Name=PHA56_RS00830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS00830;old_locus_tag=PHA56_00830 NZ_CP116214.1 Protein Homology CDS 168915 169286 . + 0 ID=cds-WP_032692970.1;Parent=gene-PHA56_RS00830;Dbxref=Genbank:WP_032692970.1;Name=WP_032692970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004137769.1;locus_tag=PHA56_RS00830;product=DUF3302 domain-containing protein;protein_id=WP_032692970.1;transl_table=11 NZ_CP116214.1 RefSeq gene 169290 170426 . + . ID=gene-PHA56_RS00835;Name=PHA56_RS00835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS00835;old_locus_tag=PHA56_00835 NZ_CP116214.1 Protein Homology CDS 169290 170426 . + 0 ID=cds-WP_032692969.1;Parent=gene-PHA56_RS00835;Dbxref=Genbank:WP_032692969.1;Name=WP_032692969.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229400.1;locus_tag=PHA56_RS00835;product=HlyD family secretion protein;protein_id=WP_032692969.1;transl_table=11 NZ_CP116214.1 RefSeq gene 170518 171126 . + . ID=gene-PHA56_RS00840;Name=PHA56_RS00840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS00840;old_locus_tag=PHA56_00840 NZ_CP116214.1 Protein Homology CDS 170518 171126 . + 0 ID=cds-WP_014227226.1;Parent=gene-PHA56_RS00840;Dbxref=Genbank:WP_014227226.1;Name=WP_014227226.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229399.1;locus_tag=PHA56_RS00840;product=glutathione S-transferase;protein_id=WP_014227226.1;transl_table=11 NZ_CP116214.1 RefSeq gene 171222 172610 . + . ID=gene-PHA56_RS00845;Name=selA;gbkey=Gene;gene=selA;gene_biotype=protein_coding;locus_tag=PHA56_RS00845;old_locus_tag=PHA56_00845 NZ_CP116214.1 Protein Homology CDS 171222 172610 . + 0 ID=cds-WP_038423854.1;Parent=gene-PHA56_RS00845;Dbxref=Genbank:WP_038423854.1;Name=WP_038423854.1;Ontology_term=GO:0016260,GO:0004125;gbkey=CDS;gene=selA;go_function=L-seryl-tRNASec selenium transferase activity|0004125||IEA;go_process=selenocysteine biosynthetic process|0016260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229398.1;locus_tag=PHA56_RS00845;product=L-seryl-tRNA(Sec) selenium transferase;protein_id=WP_038423854.1;transl_table=11 NZ_CP116214.1 RefSeq gene 172607 174448 . + . ID=gene-PHA56_RS00850;Name=selB;gbkey=Gene;gene=selB;gene_biotype=protein_coding;locus_tag=PHA56_RS00850;old_locus_tag=PHA56_00850 NZ_CP116214.1 Protein Homology CDS 172607 174448 . + 0 ID=cds-WP_014227224.1;Parent=gene-PHA56_RS00850;Dbxref=Genbank:WP_014227224.1;Name=WP_014227224.1;Ontology_term=GO:0001514,GO:0003723,GO:0003746,GO:0003924,GO:0005525;gbkey=CDS;gene=selB;go_function=RNA binding|0003723||IEA,translation elongation factor activity|0003746||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=selenocysteine incorporation|0001514||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004205031.1;locus_tag=PHA56_RS00850;product=selenocysteine-specific translation elongation factor;protein_id=WP_014227224.1;transl_table=11 NZ_CP116214.1 RefSeq gene 174562 176523 . - . ID=gene-PHA56_RS00855;Name=PHA56_RS00855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS00855;old_locus_tag=PHA56_00855 NZ_CP116214.1 Protein Homology CDS 174562 176523 . - 0 ID=cds-WP_038423852.1;Parent=gene-PHA56_RS00855;Dbxref=Genbank:WP_038423852.1;Name=WP_038423852.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009653705.1;locus_tag=PHA56_RS00855;product=glycoside hydrolase family 127 protein;protein_id=WP_038423852.1;transl_table=11 NZ_CP116214.1 RefSeq gene 176534 177934 . - . ID=gene-PHA56_RS00860;Name=PHA56_RS00860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS00860;old_locus_tag=PHA56_00860 NZ_CP116214.1 Protein Homology CDS 176534 177934 . - 0 ID=cds-WP_038422937.1;Parent=gene-PHA56_RS00860;Dbxref=Genbank:WP_038422937.1;Name=WP_038422937.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312485.1;locus_tag=PHA56_RS00860;product=MFS transporter;protein_id=WP_038422937.1;transl_table=11 NZ_CP116214.1 RefSeq gene 178187 179002 . + . ID=gene-PHA56_RS00865;Name=PHA56_RS00865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS00865;old_locus_tag=PHA56_00865 NZ_CP116214.1 Protein Homology CDS 178187 179002 . + 0 ID=cds-WP_014227222.1;Parent=gene-PHA56_RS00865;Dbxref=Genbank:WP_014227222.1;Name=WP_014227222.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006687570.1;locus_tag=PHA56_RS00865;product=helix-turn-helix domain-containing protein;protein_id=WP_014227222.1;transl_table=11 NZ_CP116214.1 RefSeq gene 179430 180128 . - . ID=gene-PHA56_RS00870;Name=araD;gbkey=Gene;gene=araD;gene_biotype=protein_coding;locus_tag=PHA56_RS00870;old_locus_tag=PHA56_00870 NZ_CP116214.1 Protein Homology CDS 179430 180128 . - 0 ID=cds-WP_014839773.1;Parent=gene-PHA56_RS00870;Dbxref=Genbank:WP_014839773.1;Name=WP_014839773.1;Ontology_term=GO:0019568,GO:0008742;gbkey=CDS;gene=araD;go_function=L-ribulose-phosphate 4-epimerase activity|0008742||IEA;go_process=arabinose catabolic process|0019568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014839773.1;locus_tag=PHA56_RS00870;product=L-ribulose-5-phosphate 4-epimerase;protein_id=WP_014839773.1;transl_table=11 NZ_CP116214.1 RefSeq gene 180122 180982 . - . ID=gene-PHA56_RS00875;Name=PHA56_RS00875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS00875;old_locus_tag=PHA56_00875 NZ_CP116214.1 Protein Homology CDS 180122 180982 . - 0 ID=cds-WP_038423850.1;Parent=gene-PHA56_RS00875;Dbxref=Genbank:WP_038423850.1;Name=WP_038423850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462576.1;locus_tag=PHA56_RS00875;product=L-ribulose-5-phosphate 3-epimerase;protein_id=WP_038423850.1;transl_table=11 NZ_CP116214.1 RefSeq gene 180975 181637 . - . ID=gene-PHA56_RS00880;Name=ulaD;gbkey=Gene;gene=ulaD;gene_biotype=protein_coding;locus_tag=PHA56_RS00880;old_locus_tag=PHA56_00880 NZ_CP116214.1 Protein Homology CDS 180975 181637 . - 0 ID=cds-WP_038423848.1;Parent=gene-PHA56_RS00880;Dbxref=Genbank:WP_038423848.1;Name=WP_038423848.1;gbkey=CDS;gene=ulaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462575.1;locus_tag=PHA56_RS00880;product=3-keto-L-gulonate-6-phosphate decarboxylase UlaD;protein_id=WP_038423848.1;transl_table=11 NZ_CP116214.1 RefSeq gene 181634 183139 . - . ID=gene-PHA56_RS00885;Name=PHA56_RS00885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS00885;old_locus_tag=PHA56_00885 NZ_CP116214.1 Protein Homology CDS 181634 183139 . - 0 ID=cds-WP_038423846.1;Parent=gene-PHA56_RS00885;Dbxref=Genbank:WP_038423846.1;Name=WP_038423846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004868856.1;locus_tag=PHA56_RS00885;product=carbohydrate kinase;protein_id=WP_038423846.1;transl_table=11 NZ_CP116214.1 RefSeq gene 183217 184536 . - . ID=gene-PHA56_RS00890;Name=PHA56_RS00890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS00890;old_locus_tag=PHA56_00890 NZ_CP116214.1 Protein Homology CDS 183217 184536 . - 0 ID=cds-WP_032692963.1;Parent=gene-PHA56_RS00890;Dbxref=Genbank:WP_032692963.1;Name=WP_032692963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120509.1;locus_tag=PHA56_RS00890;product=MFS transporter;protein_id=WP_032692963.1;transl_table=11 NZ_CP116214.1 RefSeq gene 184589 185518 . - . ID=gene-PHA56_RS00895;Name=PHA56_RS00895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS00895;old_locus_tag=PHA56_00895 NZ_CP116214.1 Protein Homology CDS 184589 185518 . - 0 ID=cds-WP_032692961.1;Parent=gene-PHA56_RS00895;Dbxref=Genbank:WP_032692961.1;Name=WP_032692961.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014227216.1;locus_tag=PHA56_RS00895;product=DUF4862 family protein;protein_id=WP_032692961.1;transl_table=11 NZ_CP116214.1 RefSeq gene 185532 185996 . - . ID=gene-PHA56_RS00900;Name=PHA56_RS00900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS00900;old_locus_tag=PHA56_00900 NZ_CP116214.1 Protein Homology CDS 185532 185996 . - 0 ID=cds-WP_014839767.1;Parent=gene-PHA56_RS00900;Dbxref=Genbank:WP_014839767.1;Name=WP_014839767.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462569.1;locus_tag=PHA56_RS00900;product=YhcH/YjgK/YiaL family protein;protein_id=WP_014839767.1;transl_table=11 NZ_CP116214.1 RefSeq gene 186008 187006 . - . ID=gene-PHA56_RS00905;Name=yiaK;gbkey=Gene;gene=yiaK;gene_biotype=protein_coding;locus_tag=PHA56_RS00905;old_locus_tag=PHA56_00905 NZ_CP116214.1 Protein Homology CDS 186008 187006 . - 0 ID=cds-WP_014227214.1;Parent=gene-PHA56_RS00905;Dbxref=Genbank:WP_014227214.1;Name=WP_014227214.1;Ontology_term=GO:0047559,GO:0070403;gbkey=CDS;gene=yiaK;go_function=3-dehydro-L-gulonate 2-dehydrogenase activity|0047559||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462568.1;locus_tag=PHA56_RS00905;product=3-dehydro-L-gulonate 2-dehydrogenase;protein_id=WP_014227214.1;transl_table=11 NZ_CP116214.1 RefSeq gene 187225 188043 . + . ID=gene-PHA56_RS00910;Name=yiaJ;gbkey=Gene;gene=yiaJ;gene_biotype=protein_coding;locus_tag=PHA56_RS00910;old_locus_tag=PHA56_00910 NZ_CP116214.1 Protein Homology CDS 187225 188043 . + 0 ID=cds-WP_014839765.1;Parent=gene-PHA56_RS00910;Dbxref=Genbank:WP_014839765.1;Name=WP_014839765.1;gbkey=CDS;gene=yiaJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014839765.1;locus_tag=PHA56_RS00910;product=IclR family transcriptional regulator YiaJ;protein_id=WP_014839765.1;transl_table=11 NZ_CP116214.1 RefSeq gene 188162 188650 . + . ID=gene-PHA56_RS00915;Name=PHA56_RS00915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS00915;old_locus_tag=PHA56_00915 NZ_CP116214.1 Protein Homology CDS 188162 188650 . + 0 ID=cds-WP_025106779.1;Parent=gene-PHA56_RS00915;Dbxref=Genbank:WP_025106779.1;Name=WP_025106779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004106813.1;locus_tag=PHA56_RS00915;product=4Fe-4S binding protein;protein_id=WP_025106779.1;transl_table=11 NZ_CP116214.1 RefSeq gene 188801 190057 . - . ID=gene-PHA56_RS00920;Name=avtA;gbkey=Gene;gene=avtA;gene_biotype=protein_coding;locus_tag=PHA56_RS00920;old_locus_tag=PHA56_00920 NZ_CP116214.1 Protein Homology CDS 188801 190057 . - 0 ID=cds-WP_014227211.1;Parent=gene-PHA56_RS00920;Dbxref=Genbank:WP_014227211.1;Name=WP_014227211.1;gbkey=CDS;gene=avtA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229395.1;locus_tag=PHA56_RS00920;product=valine--pyruvate transaminase;protein_id=WP_014227211.1;transl_table=11 NZ_CP116214.1 RefSeq gene 190232 192262 . - . ID=gene-PHA56_RS00925;Name=PHA56_RS00925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS00925;old_locus_tag=PHA56_00925 NZ_CP116214.1 Protein Homology CDS 190232 192262 . - 0 ID=cds-WP_048262711.1;Parent=gene-PHA56_RS00925;Dbxref=Genbank:WP_048262711.1;Name=WP_048262711.1;Ontology_term=GO:0004556;gbkey=CDS;go_function=alpha-amylase activity|0004556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004126487.1;locus_tag=PHA56_RS00925;product=alpha-amylase;protein_id=WP_048262711.1;transl_table=11 NZ_CP116214.1 RefSeq gene 192578 193405 . + . ID=gene-PHA56_RS00930;Name=PHA56_RS00930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS00930;old_locus_tag=PHA56_00930 NZ_CP116214.1 Protein Homology CDS 192578 193405 . + 0 ID=cds-WP_271292945.1;Parent=gene-PHA56_RS00930;Dbxref=Genbank:WP_271292945.1;Name=WP_271292945.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026230.1;locus_tag=PHA56_RS00930;product=protein bax;protein_id=WP_271292945.1;transl_table=11 NZ_CP116214.1 RefSeq gene 193466 194644 . - . ID=gene-PHA56_RS00935;Name=PHA56_RS00935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS00935;old_locus_tag=PHA56_00935 NZ_CP116214.1 Protein Homology CDS 193466 194644 . - 0 ID=cds-WP_014227208.1;Parent=gene-PHA56_RS00935;Dbxref=Genbank:WP_014227208.1;Name=WP_014227208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229392.1;locus_tag=PHA56_RS00935;product=XylR family transcriptional regulator;protein_id=WP_014227208.1;transl_table=11 NZ_CP116214.1 RefSeq gene 194767 195948 . - . ID=gene-PHA56_RS00940;Name=gguB;gbkey=Gene;gene=gguB;gene_biotype=protein_coding;locus_tag=PHA56_RS00940;old_locus_tag=PHA56_00940 NZ_CP116214.1 Protein Homology CDS 194767 195948 . - 0 ID=cds-WP_032751665.1;Parent=gene-PHA56_RS00940;Dbxref=Genbank:WP_032751665.1;Name=WP_032751665.1;Ontology_term=GO:0043190;gbkey=CDS;gene=gguB;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229391.1;locus_tag=PHA56_RS00940;product=sugar ABC transporter permease;protein_id=WP_032751665.1;transl_table=11 NZ_CP116214.1 RefSeq gene 195926 197467 . - . ID=gene-PHA56_RS00945;Name=PHA56_RS00945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS00945;old_locus_tag=PHA56_00945 NZ_CP116214.1 Protein Homology CDS 195926 197467 . - 0 ID=cds-WP_076752422.1;Parent=gene-PHA56_RS00945;Dbxref=Genbank:WP_076752422.1;Name=WP_076752422.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229390.1;locus_tag=PHA56_RS00945;product=xylose ABC transporter ATP-binding protein;protein_id=WP_076752422.1;transl_table=11 NZ_CP116214.1 RefSeq gene 197532 198524 . - . ID=gene-PHA56_RS00950;Name=xylF;gbkey=Gene;gene=xylF;gene_biotype=protein_coding;locus_tag=PHA56_RS00950;old_locus_tag=PHA56_00950 NZ_CP116214.1 Protein Homology CDS 197532 198524 . - 0 ID=cds-WP_014227205.1;Parent=gene-PHA56_RS00950;Dbxref=Genbank:WP_014227205.1;Name=WP_014227205.1;Ontology_term=GO:0015753;gbkey=CDS;gene=xylF;go_process=D-xylose transmembrane transport|0015753||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017900027.1;locus_tag=PHA56_RS00950;product=D-xylose ABC transporter substrate-binding protein;protein_id=WP_014227205.1;transl_table=11 NZ_CP116214.1 RefSeq gene 198899 200221 . + . ID=gene-PHA56_RS00955;Name=xylA;gbkey=Gene;gene=xylA;gene_biotype=protein_coding;locus_tag=PHA56_RS00955;old_locus_tag=PHA56_00955 NZ_CP116214.1 Protein Homology CDS 198899 200221 . + 0 ID=cds-WP_014227204.1;Parent=gene-PHA56_RS00955;Dbxref=Genbank:WP_014227204.1;Name=WP_014227204.1;Ontology_term=GO:0006098,GO:0042732,GO:0000287,GO:0009045;gbkey=CDS;gene=xylA;go_function=magnesium ion binding|0000287||IEA,xylose isomerase activity|0009045||IEA;go_process=pentose-phosphate shunt|0006098||IEA,D-xylose metabolic process|0042732||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229388.1;locus_tag=PHA56_RS00955;product=xylose isomerase;protein_id=WP_014227204.1;transl_table=11 NZ_CP116214.1 RefSeq gene 200318 201772 . + . ID=gene-PHA56_RS00960;Name=xylB;gbkey=Gene;gene=xylB;gene_biotype=protein_coding;locus_tag=PHA56_RS00960;old_locus_tag=PHA56_00960 NZ_CP116214.1 Protein Homology CDS 200318 201772 . + 0 ID=cds-WP_014227203.1;Parent=gene-PHA56_RS00960;Dbxref=Genbank:WP_014227203.1;Name=WP_014227203.1;Ontology_term=GO:0005997,GO:0004856;gbkey=CDS;gene=xylB;go_function=xylulokinase activity|0004856||IEA;go_process=xylulose metabolic process|0005997||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229387.1;locus_tag=PHA56_RS00960;product=xylulokinase;protein_id=WP_014227203.1;transl_table=11 NZ_CP116214.1 RefSeq gene 201941 202315 . + . ID=gene-PHA56_RS00965;Name=yiaB;gbkey=Gene;gene=yiaB;gene_biotype=protein_coding;locus_tag=PHA56_RS00965;old_locus_tag=PHA56_00965 NZ_CP116214.1 Protein Homology CDS 201941 202315 . + 0 ID=cds-WP_014227202.1;Parent=gene-PHA56_RS00965;Dbxref=Genbank:WP_014227202.1;Name=WP_014227202.1;gbkey=CDS;gene=yiaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014227202.1;locus_tag=PHA56_RS00965;product=inner membrane protein YiaB;protein_id=WP_014227202.1;transl_table=11 NZ_CP116214.1 RefSeq gene 202409 203404 . - . ID=gene-PHA56_RS00970;Name=PHA56_RS00970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS00970;old_locus_tag=PHA56_00970 NZ_CP116214.1 Protein Homology CDS 202409 203404 . - 0 ID=cds-WP_038423835.1;Parent=gene-PHA56_RS00970;Dbxref=Genbank:WP_038423835.1;Name=WP_038423835.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229384.1;locus_tag=PHA56_RS00970;product=acyltransferase;protein_id=WP_038423835.1;transl_table=11 NZ_CP116214.1 RefSeq gene 203585 203890 . + . ID=gene-PHA56_RS00975;Name=PHA56_RS00975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS00975;old_locus_tag=PHA56_00975 NZ_CP116214.1 Protein Homology CDS 203585 203890 . + 0 ID=cds-WP_014227200.1;Parent=gene-PHA56_RS00975;Dbxref=Genbank:WP_014227200.1;Name=WP_014227200.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004855364.1;locus_tag=PHA56_RS00975;product=YsaB family lipoprotein;protein_id=WP_014227200.1;transl_table=11 NZ_CP116214.1 RefSeq gene 204018 204929 . + . ID=gene-PHA56_RS00980;Name=glyQ;gbkey=Gene;gene=glyQ;gene_biotype=protein_coding;locus_tag=PHA56_RS00980;old_locus_tag=PHA56_00980 NZ_CP116214.1 Protein Homology CDS 204018 204929 . + 0 ID=cds-WP_004126458.1;Parent=gene-PHA56_RS00980;Dbxref=Genbank:WP_004126458.1;Name=WP_004126458.1;Ontology_term=GO:0006426,GO:0004820,GO:0009345;gbkey=CDS;gene=glyQ;go_component=glycine-tRNA ligase complex|0009345||IEA;go_function=glycine-tRNA ligase activity|0004820||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462556.1;locus_tag=PHA56_RS00980;product=glycine--tRNA ligase subunit alpha;protein_id=WP_004126458.1;transl_table=11 NZ_CP116214.1 RefSeq gene 204939 207008 . + . ID=gene-PHA56_RS00985;Name=glyS;gbkey=Gene;gene=glyS;gene_biotype=protein_coding;locus_tag=PHA56_RS00985;old_locus_tag=PHA56_00985 NZ_CP116214.1 Protein Homology CDS 204939 207008 . + 0 ID=cds-WP_025106788.1;Parent=gene-PHA56_RS00985;Dbxref=Genbank:WP_025106788.1;Name=WP_025106788.1;Ontology_term=GO:0006426,GO:0004820,GO:0009345;gbkey=CDS;gene=glyS;go_component=glycine-tRNA ligase complex|0009345||IEA;go_function=glycine-tRNA ligase activity|0004820||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001291772.1;locus_tag=PHA56_RS00985;product=glycine--tRNA ligase subunit beta;protein_id=WP_025106788.1;transl_table=11 NZ_CP116214.1 RefSeq gene 207336 207488 . + . ID=gene-PHA56_RS00990;Name=hokA;gbkey=Gene;gene=hokA;gene_biotype=protein_coding;locus_tag=PHA56_RS00990;old_locus_tag=PHA56_00990 NZ_CP116214.1 Protein Homology CDS 207336 207488 . + 0 ID=cds-WP_004106778.1;Parent=gene-PHA56_RS00990;Dbxref=Genbank:WP_004106778.1;Name=WP_004106778.1;gbkey=CDS;gene=hokA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009651640.1;locus_tag=PHA56_RS00990;product=type I toxin-antitoxin system toxin HokA;protein_id=WP_004106778.1;transl_table=11 NZ_CP116214.1 RefSeq gene 207792 209411 . + . ID=gene-PHA56_RS00995;Name=PHA56_RS00995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS00995;old_locus_tag=PHA56_00995 NZ_CP116214.1 Protein Homology CDS 207792 209411 . + 0 ID=cds-WP_038423832.1;Parent=gene-PHA56_RS00995;Dbxref=Genbank:WP_038423832.1;Name=WP_038423832.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009651634.1;locus_tag=PHA56_RS00995;product=ATP-binding cassette domain-containing protein;protein_id=WP_038423832.1;transl_table=11 NZ_CP116214.1 RefSeq gene 209511 209723 . - . ID=gene-PHA56_RS01000;Name=cspA;gbkey=Gene;gene=cspA;gene_biotype=protein_coding;locus_tag=PHA56_RS01000;old_locus_tag=PHA56_01000 NZ_CP116214.1 Protein Homology CDS 209511 209723 . - 0 ID=cds-WP_004126446.1;Parent=gene-PHA56_RS01000;Dbxref=Genbank:WP_004126446.1;Name=WP_004126446.1;gbkey=CDS;gene=cspA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312468.1;locus_tag=PHA56_RS01000;product=RNA chaperone/antiterminator CspA;protein_id=WP_004126446.1;transl_table=11 NZ_CP116214.1 RefSeq gene 209984 210277 . - . ID=gene-PHA56_RS01005;Name=PHA56_RS01005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS01005;old_locus_tag=PHA56_01005 NZ_CP116214.1 Protein Homology CDS 209984 210277 . - 0 ID=cds-WP_004106774.1;Parent=gene-PHA56_RS01005;Dbxref=Genbank:WP_004106774.1;Name=WP_004106774.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004126445.1;locus_tag=PHA56_RS01005;product=HTH-type transcriptional regulator;protein_id=WP_004106774.1;transl_table=11 NZ_CP116214.1 RefSeq gene 210514 211872 . - . ID=gene-PHA56_RS01010;Name=PHA56_RS01010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS01010;old_locus_tag=PHA56_01010 NZ_CP116214.1 Protein Homology CDS 210514 211872 . - 0 ID=cds-WP_032692957.1;Parent=gene-PHA56_RS01010;Dbxref=Genbank:WP_032692957.1;Name=WP_032692957.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009652694.1;locus_tag=PHA56_RS01010;product=aromatic acid/H+ symport family MFS transporter;protein_id=WP_032692957.1;transl_table=11 NZ_CP116214.1 RefSeq gene 212314 213024 . + . ID=gene-PHA56_RS01015;Name=PHA56_RS01015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS01015;old_locus_tag=PHA56_01015 NZ_CP116214.1 Protein Homology CDS 212314 213024 . + 0 ID=cds-WP_004126443.1;Parent=gene-PHA56_RS01015;Dbxref=Genbank:WP_004126443.1;Name=WP_004126443.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229375.1;locus_tag=PHA56_RS01015;product=DUF3053 domain-containing protein;protein_id=WP_004126443.1;transl_table=11 NZ_CP116214.1 RefSeq gene 213082 214053 . - . ID=gene-PHA56_RS01020;Name=ghrB;gbkey=Gene;gene=ghrB;gene_biotype=protein_coding;locus_tag=PHA56_RS01020;old_locus_tag=PHA56_01020 NZ_CP116214.1 Protein Homology CDS 213082 214053 . - 0 ID=cds-WP_076752420.1;Parent=gene-PHA56_RS01020;Dbxref=Genbank:WP_076752420.1;Name=WP_076752420.1;Ontology_term=GO:0016616,GO:0051287;gbkey=CDS;gene=ghrB;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229374.1;locus_tag=PHA56_RS01020;product=glyoxylate/hydroxypyruvate reductase GhrB;protein_id=WP_076752420.1;transl_table=11 NZ_CP116214.1 RefSeq gene 214078 215358 . - . ID=gene-PHA56_RS01025;Name=PHA56_RS01025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS01025;old_locus_tag=PHA56_01025 NZ_CP116214.1 Protein Homology CDS 214078 215358 . - 0 ID=cds-WP_004855346.1;Parent=gene-PHA56_RS01025;Dbxref=Genbank:WP_004855346.1;Name=WP_004855346.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229373.1;locus_tag=PHA56_RS01025;product=MFS transporter;protein_id=WP_004855346.1;transl_table=11 NZ_CP116214.1 RefSeq gene 215460 216398 . - . ID=gene-PHA56_RS01030;Name=PHA56_RS01030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS01030;old_locus_tag=PHA56_01030 NZ_CP116214.1 Protein Homology CDS 215460 216398 . - 0 ID=cds-WP_076752419.1;Parent=gene-PHA56_RS01030;Dbxref=Genbank:WP_076752419.1;Name=WP_076752419.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003827390.1;locus_tag=PHA56_RS01030;product=sugar kinase;protein_id=WP_076752419.1;transl_table=11 NZ_CP116214.1 RefSeq gene 216402 217151 . - . ID=gene-PHA56_RS01035;Name=PHA56_RS01035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS01035;old_locus_tag=PHA56_01035 NZ_CP116214.1 Protein Homology CDS 216402 217151 . - 0 ID=cds-WP_004855342.1;Parent=gene-PHA56_RS01035;Dbxref=Genbank:WP_004855342.1;Name=WP_004855342.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229371.1;locus_tag=PHA56_RS01035;product=sugar phosphate isomerase/epimerase;protein_id=WP_004855342.1;transl_table=11 NZ_CP116214.1 RefSeq gene 217260 218276 . - . ID=gene-PHA56_RS01040;Name=PHA56_RS01040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS01040;old_locus_tag=PHA56_01040 NZ_CP116214.1 Protein Homology CDS 217260 218276 . - 0 ID=cds-WP_004855337.1;Parent=gene-PHA56_RS01040;Dbxref=Genbank:WP_004855337.1;Name=WP_004855337.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229370.1;locus_tag=PHA56_RS01040;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_004855337.1;transl_table=11 NZ_CP116214.1 RefSeq gene 218370 219032 . - . ID=gene-PHA56_RS01045;Name=PHA56_RS01045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS01045;old_locus_tag=PHA56_01045 NZ_CP116214.1 Protein Homology CDS 218370 219032 . - 0 ID=cds-WP_004855336.1;Parent=gene-PHA56_RS01045;Dbxref=Genbank:WP_004855336.1;Name=WP_004855336.1;Ontology_term=GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229368.1;locus_tag=PHA56_RS01045;product=OmpA family lipoprotein;protein_id=WP_004855336.1;transl_table=11 NZ_CP116214.1 RefSeq gene 219200 221530 . + . ID=gene-PHA56_RS01050;Name=PHA56_RS01050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS01050;old_locus_tag=PHA56_01050 NZ_CP116214.1 Protein Homology CDS 219200 221530 . + 0 ID=cds-WP_076752418.1;Parent=gene-PHA56_RS01050;Dbxref=Genbank:WP_076752418.1;Name=WP_076752418.1;Ontology_term=GO:0016491,GO:0043546;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,molybdopterin cofactor binding|0043546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229367.1;locus_tag=PHA56_RS01050;product=molybdopterin guanine dinucleotide-containing S/N-oxide reductase;protein_id=WP_076752418.1;transl_table=11 NZ_CP116214.1 RefSeq gene 221493 221939 . - . ID=gene-PHA56_RS01055;Name=PHA56_RS01055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS01055;old_locus_tag=PHA56_01055 NZ_CP116214.1 Protein Homology CDS 221493 221939 . - 0 ID=cds-WP_004137819.1;Parent=gene-PHA56_RS01055;Dbxref=Genbank:WP_004137819.1;Name=WP_004137819.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004137819.1;locus_tag=PHA56_RS01055;product=N-acetyltransferase;protein_id=WP_004137819.1;transl_table=11 NZ_CP116214.1 RefSeq gene 221929 222498 . - . ID=gene-PHA56_RS01060;Name=tag;gbkey=Gene;gene=tag;gene_biotype=protein_coding;locus_tag=PHA56_RS01060;old_locus_tag=PHA56_01060 NZ_CP116214.1 Protein Homology CDS 221929 222498 . - 0 ID=cds-WP_189087286.1;Parent=gene-PHA56_RS01060;Dbxref=Genbank:WP_189087286.1;Name=WP_189087286.1;gbkey=CDS;gene=tag;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014227193.1;locus_tag=PHA56_RS01060;product=DNA-3-methyladenine glycosylase I;protein_id=WP_189087286.1;transl_table=11 NZ_CP116214.1 RefSeq gene 222659 223303 . + . ID=gene-PHA56_RS01065;Name=PHA56_RS01065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS01065;old_locus_tag=PHA56_01065 NZ_CP116214.1 Protein Homology CDS 222659 223303 . + 0 ID=cds-WP_038423826.1;Parent=gene-PHA56_RS01065;Dbxref=Genbank:WP_038423826.1;Name=WP_038423826.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009484193.1;locus_tag=PHA56_RS01065;product=hypothetical protein;protein_id=WP_038423826.1;transl_table=11 NZ_CP116214.1 RefSeq gene 223646 224848 . + . ID=gene-PHA56_RS01070;Name=PHA56_RS01070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS01070;old_locus_tag=PHA56_01070 NZ_CP116214.1 Protein Homology CDS 223646 224848 . + 0 ID=cds-WP_014227191.1;Parent=gene-PHA56_RS01070;Dbxref=Genbank:WP_014227191.1;Name=WP_014227191.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229363.1;locus_tag=PHA56_RS01070;product=MFS transporter;protein_id=WP_014227191.1;transl_table=11 NZ_CP116214.1 RefSeq gene 225090 226778 . + . ID=gene-PHA56_RS01075;Name=eptB;gbkey=Gene;gene=eptB;gene_biotype=protein_coding;locus_tag=PHA56_RS01075;old_locus_tag=PHA56_01075 NZ_CP116214.1 Protein Homology CDS 225090 226778 . + 0 ID=cds-WP_014227190.1;Parent=gene-PHA56_RS01075;Dbxref=Genbank:WP_014227190.1;Name=WP_014227190.1;Ontology_term=GO:0008484;gbkey=CDS;gene=eptB;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004855325.1;locus_tag=PHA56_RS01075;product=kdo(2)-lipid A phosphoethanolamine 7''-transferase;protein_id=WP_014227190.1;transl_table=11 NZ_CP116214.1 RefSeq gene 226868 226944 . + . ID=gene-PHA56_RS01080;Name=PHA56_RS01080;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA56_RS01080;old_locus_tag=PHA56_01080 NZ_CP116214.1 tRNAscan-SE tRNA 226868 226944 . + . ID=rna-PHA56_RS01080;Parent=gene-PHA56_RS01080;anticodon=(pos:226902..226904);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS01080;product=tRNA-Pro NZ_CP116214.1 tRNAscan-SE exon 226868 226944 . + . ID=exon-PHA56_RS01080-1;Parent=rna-PHA56_RS01080;anticodon=(pos:226902..226904);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS01080;product=tRNA-Pro NZ_CP116214.1 RefSeq gene 226979 227110 . + . ID=gene-PHA56_RS01085;Name=PHA56_RS01085;gbkey=Gene;gene_biotype=ncRNA;locus_tag=PHA56_RS01085;old_locus_tag=PHA56_01085 NZ_CP116214.1 cmsearch ncRNA 226979 227110 . + . ID=rna-PHA56_RS01085;Parent=gene-PHA56_RS01085;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA56_RS01085;product=RtT sRNA NZ_CP116214.1 cmsearch exon 226979 227110 . + . ID=exon-PHA56_RS01085-1;Parent=rna-PHA56_RS01085;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA56_RS01085;product=RtT sRNA NZ_CP116214.1 RefSeq gene 228003 229610 . + . ID=gene-PHA56_RS01090;Name=PHA56_RS01090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS01090;old_locus_tag=PHA56_01090 NZ_CP116214.1 Protein Homology CDS 228003 229610 . + 0 ID=cds-WP_004855324.1;Parent=gene-PHA56_RS01090;Dbxref=Genbank:WP_004855324.1;Name=WP_004855324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462532.1;locus_tag=PHA56_RS01090;product=ABC transporter substrate-binding protein;protein_id=WP_004855324.1;transl_table=11 NZ_CP116214.1 RefSeq gene 229718 230737 . + . ID=gene-PHA56_RS01095;Name=dppB;gbkey=Gene;gene=dppB;gene_biotype=protein_coding;locus_tag=PHA56_RS01095;old_locus_tag=PHA56_01095 NZ_CP116214.1 Protein Homology CDS 229718 230737 . + 0 ID=cds-WP_014227188.1;Parent=gene-PHA56_RS01095;Dbxref=Genbank:WP_014227188.1;Name=WP_014227188.1;gbkey=CDS;gene=dppB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133865.1;locus_tag=PHA56_RS01095;product=dipeptide ABC transporter permease DppB;protein_id=WP_014227188.1;transl_table=11 NZ_CP116214.1 RefSeq gene 230747 231649 . + . ID=gene-PHA56_RS01100;Name=dppC;gbkey=Gene;gene=dppC;gene_biotype=protein_coding;locus_tag=PHA56_RS01100;old_locus_tag=PHA56_01100 NZ_CP116214.1 Protein Homology CDS 230747 231649 . + 0 ID=cds-WP_014227187.1;Parent=gene-PHA56_RS01100;Dbxref=Genbank:WP_014227187.1;Name=WP_014227187.1;Ontology_term=GO:0055085;gbkey=CDS;gene=dppC;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010426221.1;locus_tag=PHA56_RS01100;product=dipeptide ABC transporter permease DppC;protein_id=WP_014227187.1;transl_table=11 NZ_CP116214.1 RefSeq gene 231660 232643 . + . ID=gene-PHA56_RS01105;Name=dppD;gbkey=Gene;gene=dppD;gene_biotype=protein_coding;locus_tag=PHA56_RS01105;old_locus_tag=PHA56_01105 NZ_CP116214.1 Protein Homology CDS 231660 232643 . + 0 ID=cds-WP_014227186.1;Parent=gene-PHA56_RS01105;Dbxref=Genbank:WP_014227186.1;Name=WP_014227186.1;Ontology_term=GO:0015833,GO:0000166,GO:0005524;gbkey=CDS;gene=dppD;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229355.1;locus_tag=PHA56_RS01105;product=dipeptide ABC transporter ATP-binding protein;protein_id=WP_014227186.1;transl_table=11 NZ_CP116214.1 RefSeq gene 232640 233653 . + . ID=gene-PHA56_RS01110;Name=dppF;gbkey=Gene;gene=dppF;gene_biotype=protein_coding;locus_tag=PHA56_RS01110;old_locus_tag=PHA56_01110 NZ_CP116214.1 Protein Homology CDS 232640 233653 . + 0 ID=cds-WP_014227185.1;Parent=gene-PHA56_RS01110;Dbxref=Genbank:WP_014227185.1;Name=WP_014227185.1;gbkey=CDS;gene=dppF;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229354.1;locus_tag=PHA56_RS01110;product=dipeptide ABC transporter ATP-binding subunit DppF;protein_id=WP_014227185.1;transl_table=11 NZ_CP116214.1 RefSeq gene 234367 234945 . + . ID=gene-PHA56_RS01115;Name=bcsO;gbkey=Gene;gene=bcsO;gene_biotype=protein_coding;locus_tag=PHA56_RS01115;old_locus_tag=PHA56_01115 NZ_CP116214.1 Protein Homology CDS 234367 234945 . + 0 ID=cds-WP_014227184.1;Parent=gene-PHA56_RS01115;Dbxref=Genbank:WP_014227184.1;Name=WP_014227184.1;gbkey=CDS;gene=bcsO;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004145205.1;locus_tag=PHA56_RS01115;product=cellulose biosynthesis protein BcsO;protein_id=WP_014227184.1;transl_table=11 NZ_CP116214.1 RefSeq pseudogene 234947 235739 . + . ID=gene-PHA56_RS01120;Name=bcsQ;gbkey=Gene;gene=bcsQ;gene_biotype=pseudogene;locus_tag=PHA56_RS01120;old_locus_tag=PHA56_01120;pseudo=true NZ_CP116214.1 Protein Homology CDS 234947 235739 . + 0 ID=cds-PHA56_RS01120;Parent=gene-PHA56_RS01120;Note=frameshifted;Ontology_term=GO:0090540;gbkey=CDS;gene=bcsQ;go_process=bacterial cellulose biosynthetic process|0090540||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229351.1;locus_tag=PHA56_RS01120;product=cellulose biosynthesis protein BcsQ;pseudo=true;transl_table=11 NZ_CP116214.1 RefSeq gene 235760 237871 . + . ID=gene-PHA56_RS01125;Name=bcsA;gbkey=Gene;gene=bcsA;gene_biotype=protein_coding;locus_tag=PHA56_RS01125;old_locus_tag=PHA56_01125 NZ_CP116214.1 Protein Homology CDS 235760 237871 . + 0 ID=cds-WP_014227182.1;Parent=gene-PHA56_RS01125;Dbxref=Genbank:WP_014227182.1;Name=WP_014227182.1;Ontology_term=GO:0006011,GO:0030244,GO:0016759,GO:0035438;gbkey=CDS;gene=bcsA;go_function=cellulose synthase activity|0016759||IEA,cyclic-di-GMP binding|0035438||IEA;go_process=UDP-glucose metabolic process|0006011||IEA,cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229350.1;locus_tag=PHA56_RS01125;product=UDP-forming cellulose synthase catalytic subunit;protein_id=WP_014227182.1;transl_table=11 NZ_CP116214.1 RefSeq gene 237868 240276 . + . ID=gene-PHA56_RS01130;Name=bcsB;gbkey=Gene;gene=bcsB;gene_biotype=protein_coding;locus_tag=PHA56_RS01130;old_locus_tag=PHA56_01130 NZ_CP116214.1 Protein Homology CDS 237868 240276 . + 0 ID=cds-WP_014227181.1;Parent=gene-PHA56_RS01130;Dbxref=Genbank:WP_014227181.1;Name=WP_014227181.1;gbkey=CDS;gene=bcsB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229349.1;locus_tag=PHA56_RS01130;product=cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB;protein_id=WP_014227181.1;transl_table=11 NZ_CP116214.1 RefSeq gene 240273 244325 . + . ID=gene-PHA56_RS01135;Name=PHA56_RS01135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS01135;old_locus_tag=PHA56_01135 NZ_CP116214.1 Protein Homology CDS 240273 244325 . + 0 ID=cds-WP_014227180.1;Parent=gene-PHA56_RS01135;Dbxref=Genbank:WP_014227180.1;Name=WP_014227180.1;Ontology_term=GO:0030244,GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;go_process=cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014839756.1;locus_tag=PHA56_RS01135;product=cellulose biosynthesis protein BcsC;protein_id=WP_014227180.1;transl_table=11 NZ_CP116214.1 RefSeq gene 244325 244801 . + . ID=gene-PHA56_RS01140;Name=bcsD;gbkey=Gene;gene=bcsD;gene_biotype=protein_coding;locus_tag=PHA56_RS01140;old_locus_tag=PHA56_01140 NZ_CP116214.1 Protein Homology CDS 244325 244801 . + 0 ID=cds-WP_032694183.1;Parent=gene-PHA56_RS01140;Dbxref=Genbank:WP_032694183.1;Name=WP_032694183.1;gbkey=CDS;gene=bcsD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229347.1;locus_tag=PHA56_RS01140;product=cellulose biosynthesis protein BcsD;protein_id=WP_032694183.1;transl_table=11 NZ_CP116214.1 RefSeq gene 244813 245811 . + . ID=gene-PHA56_RS01145;Name=PHA56_RS01145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS01145;old_locus_tag=PHA56_01145 NZ_CP116214.1 Protein Homology CDS 244813 245811 . + 0 ID=cds-WP_014839755.1;Parent=gene-PHA56_RS01145;Dbxref=Genbank:WP_014839755.1;Name=WP_014839755.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014839755.1;locus_tag=PHA56_RS01145;product=glycosyl hydrolase family 8;protein_id=WP_014839755.1;transl_table=11 NZ_CP116214.1 RefSeq gene 246077 246184 . + . ID=gene-PHA56_RS01150;Name=PHA56_RS01150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS01150;old_locus_tag=PHA56_01150 NZ_CP116214.1 Protein Homology CDS 246077 246184 . + 0 ID=cds-WP_014227177.1;Parent=gene-PHA56_RS01150;Dbxref=Genbank:WP_014227177.1;Name=WP_014227177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000141634.1;locus_tag=PHA56_RS01150;product=type I toxin-antitoxin system toxin Ldr family protein;protein_id=WP_014227177.1;transl_table=11 NZ_CP116214.1 RefSeq gene 246553 246660 . + . ID=gene-PHA56_RS01155;Name=PHA56_RS01155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS01155;old_locus_tag=PHA56_01155 NZ_CP116214.1 Protein Homology CDS 246553 246660 . + 0 ID=cds-WP_004855299.1;Parent=gene-PHA56_RS01155;Dbxref=Genbank:WP_004855299.1;Name=WP_004855299.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000141634.1;locus_tag=PHA56_RS01155;product=type I toxin-antitoxin system toxin Ldr family protein;protein_id=WP_004855299.1;transl_table=11 NZ_CP116214.1 RefSeq gene 247031 247138 . + . ID=gene-PHA56_RS01160;Name=PHA56_RS01160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS01160;old_locus_tag=PHA56_01160 NZ_CP116214.1 Protein Homology CDS 247031 247138 . + 0 ID=cds-WP_004855299.1-2;Parent=gene-PHA56_RS01160;Dbxref=Genbank:WP_004855299.1;Name=WP_004855299.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000141634.1;locus_tag=PHA56_RS01160;product=type I toxin-antitoxin system toxin Ldr family protein;protein_id=WP_004855299.1;transl_table=11 NZ_CP116214.1 RefSeq gene 247222 248898 . - . ID=gene-PHA56_RS01165;Name=bcsG;gbkey=Gene;gene=bcsG;gene_biotype=protein_coding;locus_tag=PHA56_RS01165;old_locus_tag=PHA56_01165 NZ_CP116214.1 Protein Homology CDS 247222 248898 . - 0 ID=cds-WP_014227176.1;Parent=gene-PHA56_RS01165;Dbxref=Genbank:WP_014227176.1;Name=WP_014227176.1;Ontology_term=GO:0030244,GO:0003674,GO:0005575;gbkey=CDS;gene=bcsG;go_component=cellular_component|0005575||IEA;go_function=molecular_function|0003674||IEA;go_process=cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229345.1;locus_tag=PHA56_RS01165;product=cellulose biosynthesis protein BcsG;protein_id=WP_014227176.1;transl_table=11 NZ_CP116214.1 RefSeq gene 248895 249092 . - . ID=gene-PHA56_RS01170;Name=bcsF;gbkey=Gene;gene=bcsF;gene_biotype=protein_coding;locus_tag=PHA56_RS01170;old_locus_tag=PHA56_01170 NZ_CP116214.1 Protein Homology CDS 248895 249092 . - 0 ID=cds-WP_014227175.1;Parent=gene-PHA56_RS01170;Dbxref=Genbank:WP_014227175.1;Name=WP_014227175.1;Ontology_term=GO:0052324,GO:0003674,GO:0005575;gbkey=CDS;gene=bcsF;go_component=cellular_component|0005575||IEA;go_function=molecular_function|0003674||IEA;go_process=plant-type cell wall cellulose biosynthetic process|0052324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229344.1;locus_tag=PHA56_RS01170;product=cellulose biosynthesis protein BcsF;protein_id=WP_014227175.1;transl_table=11 NZ_CP116214.1 RefSeq gene 249089 250645 . - . ID=gene-PHA56_RS01175;Name=bcsE;gbkey=Gene;gene=bcsE;gene_biotype=protein_coding;locus_tag=PHA56_RS01175;old_locus_tag=PHA56_01175 NZ_CP116214.1 Protein Homology CDS 249089 250645 . - 0 ID=cds-WP_038422941.1;Parent=gene-PHA56_RS01175;Dbxref=Genbank:WP_038422941.1;Name=WP_038422941.1;gbkey=CDS;gene=bcsE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004855292.1;locus_tag=PHA56_RS01175;product=cellulose biosynthesis protein BcsE;protein_id=WP_038422941.1;transl_table=11 NZ_CP116214.1 RefSeq pseudogene 250813 250983 . + . ID=gene-PHA56_RS01180;Name=bcsR;end_range=250983,.;gbkey=Gene;gene=bcsR;gene_biotype=pseudogene;locus_tag=PHA56_RS01180;old_locus_tag=PHA56_01180;partial=true;pseudo=true NZ_CP116214.1 Protein Homology CDS 250813 250983 . + 0 ID=cds-PHA56_RS01180;Parent=gene-PHA56_RS01180;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=250983,.;gbkey=CDS;gene=bcsR;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229342.1;locus_tag=PHA56_RS01180;partial=true;product=cellulose biosynthesis protein BcsR;pseudo=true;transl_table=11 NZ_CP116214.1 RefSeq gene 251005 251702 . - . ID=gene-PHA56_RS01185;Name=PHA56_RS01185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS01185;old_locus_tag=PHA56_01185 NZ_CP116214.1 Protein Homology CDS 251453 251702 . - 0 ID=cds-WP_223335778.1;Parent=gene-PHA56_RS01185;Dbxref=Genbank:WP_223335778.1;Name=WP_223335778.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558260.1;locus_tag=PHA56_RS01185;product=IS1 family transposase;protein_id=WP_223335778.1;transl_table=11 NZ_CP116214.1 Protein Homology CDS 251005 251453 . - 2 ID=cds-WP_223335778.1;Parent=gene-PHA56_RS01185;Dbxref=Genbank:WP_223335778.1;Name=WP_223335778.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558260.1;locus_tag=PHA56_RS01185;product=IS1 family transposase;protein_id=WP_223335778.1;transl_table=11 NZ_CP116214.1 RefSeq gene 251790 252527 . + . ID=gene-PHA56_RS01190;Name=bcsQ;gbkey=Gene;gene=bcsQ;gene_biotype=protein_coding;locus_tag=PHA56_RS01190;old_locus_tag=PHA56_01190 NZ_CP116214.1 Protein Homology CDS 251790 252527 . + 0 ID=cds-WP_014227173.1;Parent=gene-PHA56_RS01190;Dbxref=Genbank:WP_014227173.1;Name=WP_014227173.1;gbkey=CDS;gene=bcsQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004126333.1;locus_tag=PHA56_RS01190;product=cellulose biosynthesis protein BcsQ;protein_id=WP_014227173.1;transl_table=11 NZ_CP116214.1 RefSeq gene 252524 255145 . + . ID=gene-PHA56_RS01195;Name=bcsA;gbkey=Gene;gene=bcsA;gene_biotype=protein_coding;locus_tag=PHA56_RS01195;old_locus_tag=PHA56_01195 NZ_CP116214.1 Protein Homology CDS 252524 255145 . + 0 ID=cds-WP_032694188.1;Parent=gene-PHA56_RS01195;Dbxref=Genbank:WP_032694188.1;Name=WP_032694188.1;Ontology_term=GO:0006011,GO:0030244,GO:0016760,GO:0035438,GO:0016020;gbkey=CDS;gene=bcsA;go_component=membrane|0016020||IEA;go_function=cellulose synthase (UDP-forming) activity|0016760||IEA,cyclic-di-GMP binding|0035438||IEA;go_process=UDP-glucose metabolic process|0006011||IEA,cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014839747.1;locus_tag=PHA56_RS01195;product=UDP-forming cellulose synthase catalytic subunit;protein_id=WP_032694188.1;transl_table=11 NZ_CP116214.1 RefSeq gene 255225 256337 . - . ID=gene-PHA56_RS01200;Name=PHA56_RS01200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS01200;old_locus_tag=PHA56_01200 NZ_CP116214.1 Protein Homology CDS 255225 256337 . - 0 ID=cds-WP_038422945.1;Parent=gene-PHA56_RS01200;Dbxref=Genbank:WP_038422945.1;Name=WP_038422945.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000817271.1;locus_tag=PHA56_RS01200;product=RNA-guided endonuclease TnpB family protein;protein_id=WP_038422945.1;transl_table=11 NZ_CP116214.1 RefSeq gene 256465 258807 . + . ID=gene-PHA56_RS01205;Name=bcsB;gbkey=Gene;gene=bcsB;gene_biotype=protein_coding;locus_tag=PHA56_RS01205;old_locus_tag=PHA56_01205 NZ_CP116214.1 Protein Homology CDS 256465 258807 . + 0 ID=cds-WP_038423820.1;Parent=gene-PHA56_RS01205;Dbxref=Genbank:WP_038423820.1;Name=WP_038423820.1;gbkey=CDS;gene=bcsB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229339.1;locus_tag=PHA56_RS01205;product=cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB;protein_id=WP_038423820.1;transl_table=11 NZ_CP116214.1 RefSeq gene 258811 259920 . + . ID=gene-PHA56_RS01210;Name=bcsZ;gbkey=Gene;gene=bcsZ;gene_biotype=protein_coding;locus_tag=PHA56_RS01210;old_locus_tag=PHA56_01210 NZ_CP116214.1 Protein Homology CDS 258811 259920 . + 0 ID=cds-WP_038423819.1;Parent=gene-PHA56_RS01210;Dbxref=Genbank:WP_038423819.1;Name=WP_038423819.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=bcsZ;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229338.1;locus_tag=PHA56_RS01210;product=cellulose synthase complex periplasmic endoglucanase BcsZ;protein_id=WP_038423819.1;transl_table=11 NZ_CP116214.1 RefSeq gene 259902 263387 . + . ID=gene-PHA56_RS01215;Name=bcsC;gbkey=Gene;gene=bcsC;gene_biotype=protein_coding;locus_tag=PHA56_RS01215;old_locus_tag=PHA56_01215 NZ_CP116214.1 Protein Homology CDS 259902 263387 . + 0 ID=cds-WP_038423817.1;Parent=gene-PHA56_RS01215;Dbxref=Genbank:WP_038423817.1;Name=WP_038423817.1;Ontology_term=GO:0030244,GO:0005515,GO:0019867;gbkey=CDS;gene=bcsC;go_component=outer membrane|0019867||IEA;go_function=protein binding|0005515||IEA;go_process=cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229337.1;locus_tag=PHA56_RS01215;product=cellulose synthase complex outer membrane protein BcsC;protein_id=WP_038423817.1;transl_table=11 NZ_CP116214.1 RefSeq gene 263402 263887 . - . ID=gene-PHA56_RS01220;Name=PHA56_RS01220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS01220;old_locus_tag=PHA56_01220 NZ_CP116214.1 GeneMarkS-2+ CDS 263402 263887 . - 0 ID=cds-WP_148673910.1;Parent=gene-PHA56_RS01220;Dbxref=Genbank:WP_148673910.1;Name=WP_148673910.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PHA56_RS01220;product=hypothetical protein;protein_id=WP_148673910.1;transl_table=11 NZ_CP116214.1 RefSeq gene 264000 266006 . + . ID=gene-PHA56_RS01225;Name=hmsP;gbkey=Gene;gene=hmsP;gene_biotype=protein_coding;locus_tag=PHA56_RS01225;old_locus_tag=PHA56_01225 NZ_CP116214.1 Protein Homology CDS 264000 266006 . + 0 ID=cds-WP_204269709.1;Parent=gene-PHA56_RS01225;Dbxref=Genbank:WP_204269709.1;Name=WP_204269709.1;Ontology_term=GO:0007165;gbkey=CDS;gene=hmsP;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016807549.1;locus_tag=PHA56_RS01225;product=biofilm formation regulator HmsP;protein_id=WP_204269709.1;transl_table=11 NZ_CP116214.1 RefSeq gene 266161 267447 . + . ID=gene-PHA56_RS01230;Name=dctA;gbkey=Gene;gene=dctA;gene_biotype=protein_coding;locus_tag=PHA56_RS01230;old_locus_tag=PHA56_01230 NZ_CP116214.1 Protein Homology CDS 266161 267447 . + 0 ID=cds-WP_014227166.1;Parent=gene-PHA56_RS01230;Dbxref=Genbank:WP_014227166.1;Name=WP_014227166.1;gbkey=CDS;gene=dctA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229334.1;locus_tag=PHA56_RS01230;product=C4-dicarboxylate transporter DctC;protein_id=WP_014227166.1;transl_table=11 NZ_CP116214.1 RefSeq gene 267669 269174 . + . ID=gene-PHA56_RS01235;Name=PHA56_RS01235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS01235;old_locus_tag=PHA56_01235 NZ_CP116214.1 Protein Homology CDS 267669 269174 . + 0 ID=cds-WP_032694194.1;Parent=gene-PHA56_RS01235;Dbxref=Genbank:WP_032694194.1;Name=WP_032694194.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229333.1;locus_tag=PHA56_RS01235;product=pitrilysin family protein;protein_id=WP_032694194.1;transl_table=11 NZ_CP116214.1 RefSeq gene 269369 270298 . - . ID=gene-PHA56_RS01240;Name=PHA56_RS01240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS01240;old_locus_tag=PHA56_01240 NZ_CP116214.1 Protein Homology CDS 269369 270298 . - 0 ID=cds-WP_032694195.1;Parent=gene-PHA56_RS01240;Dbxref=Genbank:WP_032694195.1;Name=WP_032694195.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229332.1;locus_tag=PHA56_RS01240;product=sugar kinase;protein_id=WP_032694195.1;transl_table=11 NZ_CP116214.1 RefSeq gene 270494 272545 . + . ID=gene-PHA56_RS01245;Name=PHA56_RS01245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS01245;old_locus_tag=PHA56_01245 NZ_CP116214.1 Protein Homology CDS 270494 272545 . + 0 ID=cds-WP_025106813.1;Parent=gene-PHA56_RS01245;Dbxref=Genbank:WP_025106813.1;Name=WP_025106813.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229330.1;locus_tag=PHA56_RS01245;product=AsmA family protein;protein_id=WP_025106813.1;transl_table=11 NZ_CP116214.1 RefSeq gene 272595 273917 . - . ID=gene-PHA56_RS01250;Name=PHA56_RS01250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS01250;old_locus_tag=PHA56_01250 NZ_CP116214.1 Protein Homology CDS 272595 273917 . - 0 ID=cds-WP_004126314.1;Parent=gene-PHA56_RS01250;Dbxref=Genbank:WP_004126314.1;Name=WP_004126314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229329.1;locus_tag=PHA56_RS01250;product=MFS transporter;protein_id=WP_004126314.1;transl_table=11 NZ_CP116214.1 RefSeq gene 274188 275219 . - . ID=gene-PHA56_RS01255;Name=yhjD;gbkey=Gene;gene=yhjD;gene_biotype=protein_coding;locus_tag=PHA56_RS01255;old_locus_tag=PHA56_01255 NZ_CP116214.1 Protein Homology CDS 274188 275219 . - 0 ID=cds-WP_004134249.1;Parent=gene-PHA56_RS01255;Dbxref=Genbank:WP_004134249.1;Name=WP_004134249.1;gbkey=CDS;gene=yhjD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004855254.1;locus_tag=PHA56_RS01255;product=inner membrane protein YhjD;protein_id=WP_004134249.1;transl_table=11 NZ_CP116214.1 RefSeq gene 275491 276390 . - . ID=gene-PHA56_RS01260;Name=PHA56_RS01260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS01260;old_locus_tag=PHA56_01260 NZ_CP116214.1 Protein Homology CDS 275491 276390 . - 0 ID=cds-WP_014227163.1;Parent=gene-PHA56_RS01260;Dbxref=Genbank:WP_014227163.1;Name=WP_014227163.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229327.1;locus_tag=PHA56_RS01260;product=LysR family transcriptional regulator;protein_id=WP_014227163.1;transl_table=11 NZ_CP116214.1 RefSeq pseudogene 276510 277267 . + . ID=gene-PHA56_RS01265;Name=PHA56_RS01265;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS01265;old_locus_tag=PHA56_01265;pseudo=true NZ_CP116214.1 Protein Homology CDS 276510 277267 . + 0 ID=cds-PHA56_RS01265;Parent=gene-PHA56_RS01265;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229326.1;locus_tag=PHA56_RS01265;product=SDR family oxidoreductase;pseudo=true;transl_table=11 NZ_CP116214.1 RefSeq gene 277617 278225 . + . ID=gene-PHA56_RS01270;Name=PHA56_RS01270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS01270;old_locus_tag=PHA56_01270 NZ_CP116214.1 Protein Homology CDS 277617 278225 . + 0 ID=cds-WP_033836812.1;Parent=gene-PHA56_RS01270;Dbxref=Genbank:WP_033836812.1;Name=WP_033836812.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004126308.1;locus_tag=PHA56_RS01270;product=response regulator transcription factor;protein_id=WP_033836812.1;transl_table=11 NZ_CP116214.1 RefSeq gene 278222 278650 . - . ID=gene-PHA56_RS01275;Name=PHA56_RS01275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS01275;old_locus_tag=PHA56_01275 NZ_CP116214.1 Protein Homology CDS 278222 278650 . - 0 ID=cds-WP_038423812.1;Parent=gene-PHA56_RS01275;Dbxref=Genbank:WP_038423812.1;Name=WP_038423812.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004106685.1;locus_tag=PHA56_RS01275;product=lysozyme;protein_id=WP_038423812.1;transl_table=11 NZ_CP116214.1 RefSeq gene 278704 279252 . - . ID=gene-PHA56_RS01280;Name=PHA56_RS01280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS01280;old_locus_tag=PHA56_01280 NZ_CP116214.1 Protein Homology CDS 278704 279252 . - 0 ID=cds-WP_032694202.1;Parent=gene-PHA56_RS01280;Dbxref=Genbank:WP_032694202.1;Name=WP_032694202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004855242.1;locus_tag=PHA56_RS01280;product=GNAT family protein;protein_id=WP_032694202.1;transl_table=11 NZ_CP116214.1 RefSeq gene 279321 280973 . - . ID=gene-PHA56_RS01285;Name=PHA56_RS01285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS01285;old_locus_tag=PHA56_01285 NZ_CP116214.1 Protein Homology CDS 279321 280973 . - 0 ID=cds-WP_014227158.1;Parent=gene-PHA56_RS01285;Dbxref=Genbank:WP_014227158.1;Name=WP_014227158.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004855238.1;locus_tag=PHA56_RS01285;product=alpha%2Calpha-trehalase;protein_id=WP_014227158.1;transl_table=11 NZ_CP116214.1 RefSeq gene 281240 282388 . - . ID=gene-PHA56_RS01290;Name=PHA56_RS01290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS01290;old_locus_tag=PHA56_01290 NZ_CP116214.1 Protein Homology CDS 281240 282388 . - 0 ID=cds-WP_119834537.1;Parent=gene-PHA56_RS01290;Dbxref=Genbank:WP_119834537.1;Name=WP_119834537.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229323.1;locus_tag=PHA56_RS01290;product=iron-containing alcohol dehydrogenase;protein_id=WP_119834537.1;transl_table=11 NZ_CP116214.1 RefSeq gene 282510 283133 . + . ID=gene-PHA56_RS01295;Name=PHA56_RS01295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS01295;old_locus_tag=PHA56_01295 NZ_CP116214.1 Protein Homology CDS 282510 283133 . + 0 ID=cds-WP_025106820.1;Parent=gene-PHA56_RS01295;Dbxref=Genbank:WP_025106820.1;Name=WP_025106820.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012540364.1;locus_tag=PHA56_RS01295;product=glutathione S-transferase;protein_id=WP_025106820.1;transl_table=11 NZ_CP116214.1 RefSeq gene 283185 284537 . - . ID=gene-PHA56_RS01300;Name=gorA;gbkey=Gene;gene=gorA;gene_biotype=protein_coding;locus_tag=PHA56_RS01300;old_locus_tag=PHA56_01300 NZ_CP116214.1 Protein Homology CDS 283185 284537 . - 0 ID=cds-WP_038423801.1;Parent=gene-PHA56_RS01300;Dbxref=Genbank:WP_038423801.1;Name=WP_038423801.1;Ontology_term=GO:0006749,GO:0045454,GO:0004362,GO:0050660,GO:0050661;gbkey=CDS;gene=gorA;go_function=glutathione-disulfide reductase (NADPH) activity|0004362||IEA,flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;go_process=glutathione metabolic process|0006749||IEA,cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003861215.1;locus_tag=PHA56_RS01300;product=glutathione-disulfide reductase;protein_id=WP_038423801.1;transl_table=11 NZ_CP116214.1 RefSeq gene 284609 285451 . - . ID=gene-PHA56_RS01305;Name=PHA56_RS01305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS01305;old_locus_tag=PHA56_01305 NZ_CP116214.1 Protein Homology CDS 284609 285451 . - 0 ID=cds-WP_009651758.1;Parent=gene-PHA56_RS01305;Dbxref=Genbank:WP_009651758.1;Name=WP_009651758.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229320.1;locus_tag=PHA56_RS01305;product=23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ;protein_id=WP_009651758.1;transl_table=11 NZ_CP116214.1 RefSeq gene 285637 286908 . + . ID=gene-PHA56_RS01310;Name=PHA56_RS01310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS01310;old_locus_tag=PHA56_01310 NZ_CP116214.1 Protein Homology CDS 285637 286908 . + 0 ID=cds-WP_032719955.1;Parent=gene-PHA56_RS01310;Dbxref=Genbank:WP_032719955.1;Name=WP_032719955.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229319.1;locus_tag=PHA56_RS01310;product=phosphatase PAP2 family protein;protein_id=WP_032719955.1;transl_table=11 NZ_CP116214.1 RefSeq gene 287020 288381 . - . ID=gene-PHA56_RS01315;Name=envZ;gbkey=Gene;gene=envZ;gene_biotype=protein_coding;locus_tag=PHA56_RS01315;old_locus_tag=PHA56_01315 NZ_CP116214.1 Protein Homology CDS 287020 288381 . - 0 ID=cds-WP_271292946.1;Parent=gene-PHA56_RS01315;Dbxref=Genbank:WP_271292946.1;Name=WP_271292946.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=envZ;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229226.1;locus_tag=PHA56_RS01315;product=two-component system sensor histidine kinase EnvZ;protein_id=WP_271292946.1;transl_table=11 NZ_CP116214.1 RefSeq gene 288378 289097 . - . ID=gene-PHA56_RS01320;Name=ompR;gbkey=Gene;gene=ompR;gene_biotype=protein_coding;locus_tag=PHA56_RS01320;old_locus_tag=PHA56_01320 NZ_CP116214.1 Protein Homology CDS 288378 289097 . - 0 ID=cds-WP_001157751.1;Parent=gene-PHA56_RS01320;Dbxref=Genbank:WP_001157751.1;Name=WP_001157751.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=ompR;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014646135.1;locus_tag=PHA56_RS01320;product=two-component system response regulator OmpR;protein_id=WP_001157751.1;transl_table=11 NZ_CP116214.1 RefSeq gene 289335 289814 . + . ID=gene-PHA56_RS01325;Name=greB;gbkey=Gene;gene=greB;gene_biotype=protein_coding;locus_tag=PHA56_RS01325;old_locus_tag=PHA56_01325 NZ_CP116214.1 Protein Homology CDS 289335 289814 . + 0 ID=cds-WP_004106676.1;Parent=gene-PHA56_RS01325;Dbxref=Genbank:WP_004106676.1;Name=WP_004106676.1;Ontology_term=GO:0006354,GO:0003711;gbkey=CDS;gene=greB;go_function=transcription elongation factor activity|0003711||IEA;go_process=DNA-templated transcription elongation|0006354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004116183.1;locus_tag=PHA56_RS01325;product=transcription elongation factor GreB;protein_id=WP_004106676.1;transl_table=11 NZ_CP116214.1 RefSeq gene 289916 292246 . + . ID=gene-PHA56_RS01330;Name=PHA56_RS01330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS01330;old_locus_tag=PHA56_01330 NZ_CP116214.1 Protein Homology CDS 289916 292246 . + 0 ID=cds-WP_014227151.1;Parent=gene-PHA56_RS01330;Dbxref=Genbank:WP_014227151.1;Name=WP_014227151.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229229.1;locus_tag=PHA56_RS01330;product=Tex family protein;protein_id=WP_014227151.1;transl_table=11 NZ_CP116214.1 RefSeq gene 292658 292885 . + . ID=gene-PHA56_RS01335;Name=feoA;gbkey=Gene;gene=feoA;gene_biotype=protein_coding;locus_tag=PHA56_RS01335;old_locus_tag=PHA56_01335 NZ_CP116214.1 Protein Homology CDS 292658 292885 . + 0 ID=cds-WP_004126281.1;Parent=gene-PHA56_RS01335;Dbxref=Genbank:WP_004126281.1;Name=WP_004126281.1;gbkey=CDS;gene=feoA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004126281.1;locus_tag=PHA56_RS01335;product=ferrous iron transporter A;protein_id=WP_004126281.1;transl_table=11 NZ_CP116214.1 RefSeq gene 292913 295231 . + . ID=gene-PHA56_RS01340;Name=feoB;gbkey=Gene;gene=feoB;gene_biotype=protein_coding;locus_tag=PHA56_RS01340;old_locus_tag=PHA56_01340 NZ_CP116214.1 Protein Homology CDS 292913 295231 . + 0 ID=cds-WP_271292947.1;Parent=gene-PHA56_RS01340;Dbxref=Genbank:WP_271292947.1;Name=WP_271292947.1;Ontology_term=GO:0006826,GO:0005525,GO:0015093,GO:0016020;gbkey=CDS;gene=feoB;go_component=membrane|0016020||IEA;go_function=GTP binding|0005525||IEA,ferrous iron transmembrane transporter activity|0015093||IEA;go_process=iron ion transport|0006826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229231.1;locus_tag=PHA56_RS01340;product=Fe(2+) transporter permease subunit FeoB;protein_id=WP_271292947.1;transl_table=11 NZ_CP116214.1 RefSeq gene 295241 295477 . + . ID=gene-PHA56_RS01345;Name=feoC;gbkey=Gene;gene=feoC;gene_biotype=protein_coding;locus_tag=PHA56_RS01345;old_locus_tag=PHA56_01345 NZ_CP116214.1 Protein Homology CDS 295241 295477 . + 0 ID=cds-WP_014227148.1;Parent=gene-PHA56_RS01345;Dbxref=Genbank:WP_014227148.1;Name=WP_014227148.1;gbkey=CDS;gene=feoC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229232.1;locus_tag=PHA56_RS01345;product=[Fe-S]-dependent transcriptional repressor FeoC;protein_id=WP_014227148.1;transl_table=11 NZ_CP116214.1 RefSeq gene 295709 295978 . - . ID=gene-PHA56_RS01350;Name=PHA56_RS01350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS01350;old_locus_tag=PHA56_01350 NZ_CP116214.1 Protein Homology CDS 295709 295978 . - 0 ID=cds-WP_014227147.1;Parent=gene-PHA56_RS01350;Dbxref=Genbank:WP_014227147.1;Name=WP_014227147.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229233.1;locus_tag=PHA56_RS01350;product=DUF1471 domain-containing protein;protein_id=WP_014227147.1;transl_table=11 NZ_CP116214.1 RefSeq gene 296090 296872 . - . ID=gene-PHA56_RS01355;Name=bioH;gbkey=Gene;gene=bioH;gene_biotype=protein_coding;locus_tag=PHA56_RS01355;old_locus_tag=PHA56_01355 NZ_CP116214.1 Protein Homology CDS 296090 296872 . - 0 ID=cds-WP_032694207.1;Parent=gene-PHA56_RS01355;Dbxref=Genbank:WP_032694207.1;Name=WP_032694207.1;Ontology_term=GO:0052689;gbkey=CDS;gene=bioH;go_function=carboxylic ester hydrolase activity|0052689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014227146.1;locus_tag=PHA56_RS01355;product=pimeloyl-ACP methyl ester esterase BioH;protein_id=WP_032694207.1;transl_table=11 NZ_CP116214.1 RefSeq gene 296911 297585 . + . ID=gene-PHA56_RS01360;Name=gntX;gbkey=Gene;gene=gntX;gene_biotype=protein_coding;locus_tag=PHA56_RS01360;old_locus_tag=PHA56_01360 NZ_CP116214.1 Protein Homology CDS 296911 297585 . + 0 ID=cds-WP_032694208.1;Parent=gene-PHA56_RS01360;Dbxref=Genbank:WP_032694208.1;Name=WP_032694208.1;Ontology_term=GO:0009116;gbkey=CDS;gene=gntX;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000958738.1;locus_tag=PHA56_RS01360;product=DNA utilization protein GntX;protein_id=WP_032694208.1;transl_table=11 NZ_CP116214.1 RefSeq gene 297644 298219 . + . ID=gene-PHA56_RS01365;Name=nfuA;gbkey=Gene;gene=nfuA;gene_biotype=protein_coding;locus_tag=PHA56_RS01365;old_locus_tag=PHA56_01365 NZ_CP116214.1 Protein Homology CDS 297644 298219 . + 0 ID=cds-WP_004106660.1;Parent=gene-PHA56_RS01365;Dbxref=Genbank:WP_004106660.1;Name=WP_004106660.1;Ontology_term=GO:0016226,GO:0051604,GO:0051539;gbkey=CDS;gene=nfuA;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA,protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016942932.1;locus_tag=PHA56_RS01365;product=Fe-S biogenesis protein NfuA;protein_id=WP_004106660.1;transl_table=11 NZ_CP116214.1 RefSeq pseudogene 298552 299568 . + . ID=gene-PHA56_RS01370;Name=PHA56_RS01370;end_range=299568,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS01370;old_locus_tag=PHA56_01370;partial=true;pseudo=true NZ_CP116214.1 Protein Homology CDS 298552 299568 . + 0 ID=cds-PHA56_RS01370;Parent=gene-PHA56_RS01370;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0015718,GO:0015295,GO:0005886;end_range=299568,.;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=solute:proton symporter activity|0015295||IEA;go_process=monocarboxylic acid transport|0015718||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462415.1;locus_tag=PHA56_RS01370;partial=true;product=gluconate:H+ symporter;pseudo=true;transl_table=11 NZ_CP116214.1 RefSeq gene 299620 300317 . + . ID=gene-PHA56_RS01375;Name=PHA56_RS01375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS01375;old_locus_tag=PHA56_01375 NZ_CP116214.1 Protein Homology CDS 299620 299869 . + 0 ID=cds-WP_223335778.1-2;Parent=gene-PHA56_RS01375;Dbxref=Genbank:WP_223335778.1;Name=WP_223335778.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558260.1;locus_tag=PHA56_RS01375;product=IS1 family transposase;protein_id=WP_223335778.1;transl_table=11 NZ_CP116214.1 Protein Homology CDS 299869 300317 . + 2 ID=cds-WP_223335778.1-2;Parent=gene-PHA56_RS01375;Dbxref=Genbank:WP_223335778.1;Name=WP_223335778.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558260.1;locus_tag=PHA56_RS01375;product=IS1 family transposase;protein_id=WP_223335778.1;transl_table=11 NZ_CP116214.1 RefSeq gene 300314 301447 . - . ID=gene-PHA56_RS01380;Name=PHA56_RS01380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS01380;old_locus_tag=PHA56_01380 NZ_CP116214.1 Protein Homology CDS 300314 301447 . - 0 ID=cds-WP_271292948.1;Parent=gene-PHA56_RS01380;Dbxref=Genbank:WP_271292948.1;Name=WP_271292948.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019106125.1;locus_tag=PHA56_RS01380;product=metallo-dependent hydrolase;protein_id=WP_271292948.1;transl_table=11 NZ_CP116214.1 RefSeq gene 301460 302854 . - . ID=gene-PHA56_RS01385;Name=PHA56_RS01385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS01385;old_locus_tag=PHA56_01385 NZ_CP116214.1 Protein Homology CDS 301460 302854 . - 0 ID=cds-WP_004126262.1;Parent=gene-PHA56_RS01385;Dbxref=Genbank:WP_004126262.1;Name=WP_004126262.1;Ontology_term=GO:0006820,GO:0008509,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=monoatomic anion transmembrane transporter activity|0008509||IEA;go_process=monoatomic anion transport|0006820||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004106639.1;locus_tag=PHA56_RS01385;product=DASS family sodium-coupled anion symporter;protein_id=WP_004126262.1;transl_table=11 NZ_CP116214.1 RefSeq gene 302921 303619 . - . ID=gene-PHA56_RS01390;Name=PHA56_RS01390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS01390;old_locus_tag=PHA56_01390 NZ_CP116214.1 Protein Homology CDS 302921 303619 . - 0 ID=cds-WP_032694211.1;Parent=gene-PHA56_RS01390;Dbxref=Genbank:WP_032694211.1;Name=WP_032694211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004126241.1;locus_tag=PHA56_RS01390;product=RraA family protein;protein_id=WP_032694211.1;transl_table=11 NZ_CP116214.1 RefSeq gene 303630 304583 . - . ID=gene-PHA56_RS01395;Name=PHA56_RS01395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS01395;old_locus_tag=PHA56_01395 NZ_CP116214.1 Protein Homology CDS 303630 304583 . - 0 ID=cds-WP_014227135.1;Parent=gene-PHA56_RS01395;Dbxref=Genbank:WP_014227135.1;Name=WP_014227135.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004106636.1;locus_tag=PHA56_RS01395;product=hydroxyacid dehydrogenase;protein_id=WP_014227135.1;transl_table=11 NZ_CP116214.1 RefSeq gene 304916 305248 . + . ID=gene-PHA56_RS01400;Name=PHA56_RS01400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS01400;old_locus_tag=PHA56_01400 NZ_CP116214.1 Protein Homology CDS 304916 305248 . + 0 ID=cds-WP_049080823.1;Parent=gene-PHA56_RS01400;Dbxref=Genbank:WP_049080823.1;Name=WP_049080823.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004116154.1;locus_tag=PHA56_RS01400;product=LysR family transcriptional regulator;protein_id=WP_049080823.1;transl_table=11 NZ_CP116214.1 RefSeq gene 305214 306227 . - . ID=gene-PHA56_RS01405;Name=PHA56_RS01405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS01405;old_locus_tag=PHA56_01405 NZ_CP116214.1 Protein Homology CDS 305214 306227 . - 0 ID=cds-WP_004855147.1;Parent=gene-PHA56_RS01405;Dbxref=Genbank:WP_004855147.1;Name=WP_004855147.1;Ontology_term=GO:0006812,GO:0008324;gbkey=CDS;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=monoatomic cation transport|0006812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229311.1;locus_tag=PHA56_RS01405;product=magnesium transporter;protein_id=WP_004855147.1;transl_table=11 NZ_CP116214.1 cmsearch riboswitch 306284 306467 . - . ID=id-NZ_CP116214.1:306284..306467;Dbxref=RFAM:RF00380;Note=The M-box (ykoK) riboswitch appears to function as a genetic 'off' switch that is important for maintaining magnesium homeostasis in bacteria;bound_moiety=magnesium;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NZ_CP116214.1 RefSeq gene 306721 307278 . + . ID=gene-PHA56_RS01410;Name=PHA56_RS01410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS01410;old_locus_tag=PHA56_01410 NZ_CP116214.1 Protein Homology CDS 306721 307278 . + 0 ID=cds-WP_014227134.1;Parent=gene-PHA56_RS01410;Dbxref=Genbank:WP_014227134.1;Name=WP_014227134.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014227134.1;locus_tag=PHA56_RS01410;product=DUF1440 domain-containing protein;protein_id=WP_014227134.1;transl_table=11 NZ_CP116214.1 RefSeq gene 307329 307745 . - . ID=gene-PHA56_RS01415;Name=nikR;gbkey=Gene;gene=nikR;gene_biotype=protein_coding;locus_tag=PHA56_RS01415;old_locus_tag=PHA56_01415 NZ_CP116214.1 Protein Homology CDS 307329 307745 . - 0 ID=cds-WP_025106836.1;Parent=gene-PHA56_RS01415;Dbxref=Genbank:WP_025106836.1;Name=WP_025106836.1;Ontology_term=GO:0006355,GO:0010045,GO:0003677,GO:0016151;gbkey=CDS;gene=nikR;go_function=DNA binding|0003677||IEA,nickel cation binding|0016151||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,response to nickel cation|0010045||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004116152.1;locus_tag=PHA56_RS01415;product=nickel-responsive transcriptional regulator NikR;protein_id=WP_025106836.1;transl_table=11 NZ_CP116214.1 RefSeq gene 307751 308521 . - . ID=gene-PHA56_RS01420;Name=nikE;gbkey=Gene;gene=nikE;gene_biotype=protein_coding;locus_tag=PHA56_RS01420;old_locus_tag=PHA56_01420 NZ_CP116214.1 Protein Homology CDS 307751 308521 . - 0 ID=cds-WP_038423792.1;Parent=gene-PHA56_RS01420;Dbxref=Genbank:WP_038423792.1;Name=WP_038423792.1;Ontology_term=GO:0015675,GO:0005524,GO:0015413,GO:0009898,GO:0043190;gbkey=CDS;gene=nikE;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type nickel transporter activity|0015413||IEA;go_process=nickel cation transport|0015675||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004116149.1;locus_tag=PHA56_RS01420;product=nickel import ATP-binding protein NikE;protein_id=WP_038423792.1;transl_table=11 NZ_CP116214.1 RefSeq gene 308521 309282 . - . ID=gene-PHA56_RS01425;Name=nikD;gbkey=Gene;gene=nikD;gene_biotype=protein_coding;locus_tag=PHA56_RS01425;old_locus_tag=PHA56_01425 NZ_CP116214.1 Protein Homology CDS 308521 309282 . - 0 ID=cds-WP_014227131.1;Parent=gene-PHA56_RS01425;Dbxref=Genbank:WP_014227131.1;Name=WP_014227131.1;Ontology_term=GO:0015675,GO:0005524,GO:0015413,GO:0009898,GO:0043190;gbkey=CDS;gene=nikD;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type nickel transporter activity|0015413||IEA;go_process=nickel cation transport|0015675||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004126230.1;locus_tag=PHA56_RS01425;product=nickel import ATP-binding protein NikD;protein_id=WP_014227131.1;transl_table=11 NZ_CP116214.1 RefSeq gene 309282 310115 . - . ID=gene-PHA56_RS01430;Name=nikC;gbkey=Gene;gene=nikC;gene_biotype=protein_coding;locus_tag=PHA56_RS01430;old_locus_tag=PHA56_01430 NZ_CP116214.1 Protein Homology CDS 309282 310115 . - 0 ID=cds-WP_014227130.1;Parent=gene-PHA56_RS01430;Dbxref=Genbank:WP_014227130.1;Name=WP_014227130.1;Ontology_term=GO:0055085,GO:0015099,GO:0016020;gbkey=CDS;gene=nikC;go_component=membrane|0016020||IEA;go_function=nickel cation transmembrane transporter activity|0015099||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312372.1;locus_tag=PHA56_RS01430;product=nickel ABC transporter permease subunit NikC;protein_id=WP_014227130.1;transl_table=11 NZ_CP116214.1 RefSeq gene 310112 311056 . - . ID=gene-PHA56_RS01435;Name=nikB;gbkey=Gene;gene=nikB;gene_biotype=protein_coding;locus_tag=PHA56_RS01435;old_locus_tag=PHA56_01435 NZ_CP116214.1 Protein Homology CDS 310112 311056 . - 0 ID=cds-WP_032694215.1;Parent=gene-PHA56_RS01435;Dbxref=Genbank:WP_032694215.1;Name=WP_032694215.1;gbkey=CDS;gene=nikB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312371.1;locus_tag=PHA56_RS01435;product=nickel ABC transporter permease subunit NikB;protein_id=WP_032694215.1;transl_table=11 NZ_CP116214.1 RefSeq gene 311056 312624 . - . ID=gene-PHA56_RS01440;Name=nikA;gbkey=Gene;gene=nikA;gene_biotype=protein_coding;locus_tag=PHA56_RS01440;old_locus_tag=PHA56_01440 NZ_CP116214.1 Protein Homology CDS 311056 312624 . - 0 ID=cds-WP_038423790.1;Parent=gene-PHA56_RS01440;Dbxref=Genbank:WP_038423790.1;Name=WP_038423790.1;Ontology_term=GO:0015675,GO:0015413,GO:0016151,GO:0009897,GO:0030288,GO:0055052;gbkey=CDS;gene=nikA;go_component=external side of plasma membrane|0009897||IEA,outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type nickel transporter activity|0015413||IEA,nickel cation binding|0016151||IEA;go_process=nickel cation transport|0015675||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229305.1;locus_tag=PHA56_RS01440;product=nickel ABC transporter substrate-binding protein;protein_id=WP_038423790.1;transl_table=11 NZ_CP116214.1 RefSeq gene 313211 314071 . - . ID=gene-PHA56_RS01445;Name=PHA56_RS01445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS01445;old_locus_tag=PHA56_01445 NZ_CP116214.1 Protein Homology CDS 313211 314071 . - 0 ID=cds-WP_014227126.1;Parent=gene-PHA56_RS01445;Dbxref=Genbank:WP_014227126.1;Name=WP_014227126.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229304.1;locus_tag=PHA56_RS01445;product=LysR family transcriptional regulator;protein_id=WP_014227126.1;transl_table=11 NZ_CP116214.1 RefSeq gene 314169 314675 . + . ID=gene-PHA56_RS01450;Name=PHA56_RS01450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS01450;old_locus_tag=PHA56_01450 NZ_CP116214.1 Protein Homology CDS 314169 314675 . + 0 ID=cds-WP_025106840.1;Parent=gene-PHA56_RS01450;Dbxref=Genbank:WP_025106840.1;Name=WP_025106840.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229303.1;locus_tag=PHA56_RS01450;product=phenolic acid decarboxylase;protein_id=WP_025106840.1;transl_table=11 NZ_CP116214.1 RefSeq gene 315075 316214 . + . ID=gene-PHA56_RS01455;Name=arnB;gbkey=Gene;gene=arnB;gene_biotype=protein_coding;locus_tag=PHA56_RS01455;old_locus_tag=PHA56_01455 NZ_CP116214.1 Protein Homology CDS 315075 316214 . + 0 ID=cds-WP_004855110.1;Parent=gene-PHA56_RS01455;Dbxref=Genbank:WP_004855110.1;Name=WP_004855110.1;Ontology_term=GO:0008483;gbkey=CDS;gene=arnB;go_function=transaminase activity|0008483||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229302.1;locus_tag=PHA56_RS01455;product=UDP-4-amino-4-deoxy-L-arabinose aminotransferase;protein_id=WP_004855110.1;transl_table=11 NZ_CP116214.1 RefSeq gene 316216 317199 . + . ID=gene-PHA56_RS01460;Name=arnC;gbkey=Gene;gene=arnC;gene_biotype=protein_coding;locus_tag=PHA56_RS01460;old_locus_tag=PHA56_01460 NZ_CP116214.1 Protein Homology CDS 316216 317199 . + 0 ID=cds-WP_004126208.1;Parent=gene-PHA56_RS01460;Dbxref=Genbank:WP_004126208.1;Name=WP_004126208.1;Ontology_term=GO:0016780;gbkey=CDS;gene=arnC;go_function=phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229301.1;locus_tag=PHA56_RS01460;product=undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase;protein_id=WP_004126208.1;transl_table=11 NZ_CP116214.1 RefSeq gene 317196 319181 . + . ID=gene-PHA56_RS01465;Name=arnA;gbkey=Gene;gene=arnA;gene_biotype=protein_coding;locus_tag=PHA56_RS01465;old_locus_tag=PHA56_01465 NZ_CP116214.1 Protein Homology CDS 317196 319181 . + 0 ID=cds-WP_014227124.1;Parent=gene-PHA56_RS01465;Dbxref=Genbank:WP_014227124.1;Name=WP_014227124.1;Ontology_term=GO:0009058,GO:0016742;gbkey=CDS;gene=arnA;go_function=hydroxymethyl-%2C formyl- and related transferase activity|0016742||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004855105.1;locus_tag=PHA56_RS01465;product=bifunctional UDP-4-amino-4-deoxy-L-arabinose formyltransferase/UDP-glucuronic acid oxidase ArnA;protein_id=WP_014227124.1;transl_table=11 NZ_CP116214.1 RefSeq gene 319178 320080 . + . ID=gene-PHA56_RS01470;Name=arnD;gbkey=Gene;gene=arnD;gene_biotype=protein_coding;locus_tag=PHA56_RS01470;old_locus_tag=PHA56_01470 NZ_CP116214.1 Protein Homology CDS 319178 320080 . + 0 ID=cds-WP_014227123.1;Parent=gene-PHA56_RS01470;Dbxref=Genbank:WP_014227123.1;Name=WP_014227123.1;Ontology_term=GO:0016810;gbkey=CDS;gene=arnD;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229299.1;locus_tag=PHA56_RS01470;product=4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase;protein_id=WP_014227123.1;transl_table=11 NZ_CP116214.1 RefSeq gene 320080 321735 . + . ID=gene-PHA56_RS01475;Name=arnT;gbkey=Gene;gene=arnT;gene_biotype=protein_coding;locus_tag=PHA56_RS01475;old_locus_tag=PHA56_01475 NZ_CP116214.1 Protein Homology CDS 320080 321735 . + 0 ID=cds-WP_038423788.1;Parent=gene-PHA56_RS01475;Dbxref=Genbank:WP_038423788.1;Name=WP_038423788.1;Ontology_term=GO:0006493,GO:0000030,GO:0016763,GO:0016020;gbkey=CDS;gene=arnT;go_component=membrane|0016020||IEA;go_function=mannosyltransferase activity|0000030||IEA,pentosyltransferase activity|0016763||IEA;go_process=protein O-linked glycosylation|0006493||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229298.1;locus_tag=PHA56_RS01475;product=lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase;protein_id=WP_038423788.1;transl_table=11 NZ_CP116214.1 RefSeq gene 321732 322070 . + . ID=gene-PHA56_RS01480;Name=arnE;gbkey=Gene;gene=arnE;gene_biotype=protein_coding;locus_tag=PHA56_RS01480;old_locus_tag=PHA56_01480 NZ_CP116214.1 Protein Homology CDS 321732 322070 . + 0 ID=cds-WP_014227121.1;Parent=gene-PHA56_RS01480;Dbxref=Genbank:WP_014227121.1;Name=WP_014227121.1;gbkey=CDS;gene=arnE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229297.1;locus_tag=PHA56_RS01480;product=4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE;protein_id=WP_014227121.1;transl_table=11 NZ_CP116214.1 RefSeq gene 322070 322453 . + . ID=gene-PHA56_RS01485;Name=arnF;gbkey=Gene;gene=arnF;gene_biotype=protein_coding;locus_tag=PHA56_RS01485;old_locus_tag=PHA56_01485 NZ_CP116214.1 Protein Homology CDS 322070 322453 . + 0 ID=cds-WP_038423786.1;Parent=gene-PHA56_RS01485;Dbxref=Genbank:WP_038423786.1;Name=WP_038423786.1;gbkey=CDS;gene=arnF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004126203.1;locus_tag=PHA56_RS01485;product=4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF;protein_id=WP_038423786.1;transl_table=11 NZ_CP116214.1 RefSeq gene 322450 323499 . - . ID=gene-PHA56_RS01490;Name=PHA56_RS01490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS01490;old_locus_tag=PHA56_01490 NZ_CP116214.1 Protein Homology CDS 322450 323499 . - 0 ID=cds-WP_009654337.1;Parent=gene-PHA56_RS01490;Dbxref=Genbank:WP_009654337.1;Name=WP_009654337.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462483.1;locus_tag=PHA56_RS01490;product=AI-2E family transporter;protein_id=WP_009654337.1;transl_table=11 NZ_CP116214.1 RefSeq gene 323632 324852 . + . ID=gene-PHA56_RS01495;Name=PHA56_RS01495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS01495;old_locus_tag=PHA56_01495 NZ_CP116214.1 Protein Homology CDS 323632 324852 . + 0 ID=cds-WP_014227099.1;Parent=gene-PHA56_RS01495;Dbxref=Genbank:WP_014227099.1;Name=WP_014227099.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229293.1;locus_tag=PHA56_RS01495;product=MFS transporter;protein_id=WP_014227099.1;transl_table=11 NZ_CP116214.1 RefSeq gene 324853 325410 . - . ID=gene-PHA56_RS01500;Name=PHA56_RS01500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS01500;old_locus_tag=PHA56_01500 NZ_CP116214.1 Protein Homology CDS 324853 325410 . - 0 ID=cds-WP_004855087.1;Parent=gene-PHA56_RS01500;Dbxref=Genbank:WP_004855087.1;Name=WP_004855087.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229292.1;locus_tag=PHA56_RS01500;product=DcrB family lipoprotein;protein_id=WP_004855087.1;transl_table=11 NZ_CP116214.1 RefSeq gene 325484 326149 . - . ID=gene-PHA56_RS01505;Name=PHA56_RS01505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS01505;old_locus_tag=PHA56_01505 NZ_CP116214.1 Protein Homology CDS 325484 326149 . - 0 ID=cds-WP_119834539.1;Parent=gene-PHA56_RS01505;Dbxref=Genbank:WP_119834539.1;Name=WP_119834539.1;Ontology_term=GO:1990397;gbkey=CDS;go_process=queuosine salvage|1990397||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004126198.1;locus_tag=PHA56_RS01505;product=7-cyano-7-deazaguanine/7-aminomethyl-7-deazaguanine transporter;protein_id=WP_119834539.1;transl_table=11 NZ_CP116214.1 RefSeq gene 326316 326561 . + . ID=gene-PHA56_RS01510;Name=tusA;gbkey=Gene;gene=tusA;gene_biotype=protein_coding;locus_tag=PHA56_RS01510;old_locus_tag=PHA56_01510 NZ_CP116214.1 Protein Homology CDS 326316 326561 . + 0 ID=cds-WP_004106582.1;Parent=gene-PHA56_RS01510;Dbxref=Genbank:WP_004106582.1;Name=WP_004106582.1;Ontology_term=GO:0002143,GO:0097163;gbkey=CDS;gene=tusA;go_function=sulfur carrier activity|0097163||IEA;go_process=tRNA wobble position uridine thiolation|0002143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229290.1;locus_tag=PHA56_RS01510;product=sulfurtransferase TusA;protein_id=WP_004106582.1;transl_table=11 NZ_CP116214.1 RefSeq gene 326640 328844 . - . ID=gene-PHA56_RS01515;Name=zntA;gbkey=Gene;gene=zntA;gene_biotype=protein_coding;locus_tag=PHA56_RS01515;old_locus_tag=PHA56_01515 NZ_CP116214.1 Protein Homology CDS 326640 328844 . - 0 ID=cds-WP_076752413.1;Parent=gene-PHA56_RS01515;Dbxref=Genbank:WP_076752413.1;Name=WP_076752413.1;Ontology_term=GO:0006812,GO:0005215,GO:0005524,GO:0016887,GO:0019829,GO:0046872,GO:0016020;gbkey=CDS;gene=zntA;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA,metal ion binding|0046872||IEA;go_process=monoatomic cation transport|0006812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016807575.1;locus_tag=PHA56_RS01515;product=Zn(II)/Cd(II)/Pb(II) translocating P-type ATPase ZntA;protein_id=WP_076752413.1;transl_table=11 NZ_CP116214.1 RefSeq gene 328923 329549 . - . ID=gene-PHA56_RS01520;Name=PHA56_RS01520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS01520;old_locus_tag=PHA56_01520 NZ_CP116214.1 Protein Homology CDS 328923 329549 . - 0 ID=cds-WP_004855080.1;Parent=gene-PHA56_RS01520;Dbxref=Genbank:WP_004855080.1;Name=WP_004855080.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229288.1;locus_tag=PHA56_RS01520;product=lysoplasmalogenase;protein_id=WP_004855080.1;transl_table=11 NZ_CP116214.1 RefSeq gene 329692 330051 . + . ID=gene-PHA56_RS01525;Name=PHA56_RS01525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS01525;old_locus_tag=PHA56_01525 NZ_CP116214.1 Protein Homology CDS 329692 330051 . + 0 ID=cds-WP_004855078.1;Parent=gene-PHA56_RS01525;Dbxref=Genbank:WP_004855078.1;Name=WP_004855078.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002920825.1;locus_tag=PHA56_RS01525;product=DUF2500 domain-containing protein;protein_id=WP_004855078.1;transl_table=11 NZ_CP116214.1 RefSeq gene 330066 330344 . - . ID=gene-PHA56_RS01530;Name=PHA56_RS01530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS01530;old_locus_tag=PHA56_01530 NZ_CP116214.1 Protein Homology CDS 330066 330344 . - 0 ID=cds-WP_004106574.1;Parent=gene-PHA56_RS01530;Dbxref=Genbank:WP_004106574.1;Name=WP_004106574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015369314.1;locus_tag=PHA56_RS01530;product=DUF1145 family protein;protein_id=WP_004106574.1;transl_table=11 NZ_CP116214.1 RefSeq gene 330334 330930 . - . ID=gene-PHA56_RS01535;Name=rsmD;gbkey=Gene;gene=rsmD;gene_biotype=protein_coding;locus_tag=PHA56_RS01535;old_locus_tag=PHA56_01535 NZ_CP116214.1 Protein Homology CDS 330334 330930 . - 0 ID=cds-WP_014227097.1;Parent=gene-PHA56_RS01535;Dbxref=Genbank:WP_014227097.1;Name=WP_014227097.1;Ontology_term=GO:0031167,GO:0003676,GO:0008168;gbkey=CDS;gene=rsmD;go_function=nucleic acid binding|0003676||IEA,methyltransferase activity|0008168||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229285.1;locus_tag=PHA56_RS01535;product=16S rRNA (guanine(966)-N(2))-methyltransferase;protein_id=WP_014227097.1;transl_table=11 NZ_CP116214.1 RefSeq gene 331123 332640 . + . ID=gene-PHA56_RS01540;Name=ftsY;gbkey=Gene;gene=ftsY;gene_biotype=protein_coding;locus_tag=PHA56_RS01540;old_locus_tag=PHA56_01540 NZ_CP116214.1 Protein Homology CDS 331123 332640 . + 0 ID=cds-WP_014227096.1;Parent=gene-PHA56_RS01540;Dbxref=Genbank:WP_014227096.1;Name=WP_014227096.1;Ontology_term=GO:0009306,GO:0003924,GO:0005047;gbkey=CDS;gene=ftsY;go_function=GTPase activity|0003924||IEA,signal recognition particle binding|0005047||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229284.1;locus_tag=PHA56_RS01540;product=signal recognition particle-docking protein FtsY;protein_id=WP_014227096.1;transl_table=11 NZ_CP116214.1 RefSeq gene 332643 333311 . + . ID=gene-PHA56_RS01545;Name=ftsE;gbkey=Gene;gene=ftsE;gene_biotype=protein_coding;locus_tag=PHA56_RS01545;old_locus_tag=PHA56_01545 NZ_CP116214.1 Protein Homology CDS 332643 333311 . + 0 ID=cds-WP_004106557.1;Parent=gene-PHA56_RS01545;Dbxref=Genbank:WP_004106557.1;Name=WP_004106557.1;gbkey=CDS;gene=ftsE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229283.1;locus_tag=PHA56_RS01545;product=cell division ATP-binding protein FtsE;protein_id=WP_004106557.1;transl_table=11 NZ_CP116214.1 RefSeq gene 333304 334362 . + . ID=gene-PHA56_RS01550;Name=ftsX;gbkey=Gene;gene=ftsX;gene_biotype=protein_coding;locus_tag=PHA56_RS01550;old_locus_tag=PHA56_01550 NZ_CP116214.1 Protein Homology CDS 333304 334362 . + 0 ID=cds-WP_014227095.1;Parent=gene-PHA56_RS01550;Dbxref=Genbank:WP_014227095.1;Name=WP_014227095.1;Ontology_term=GO:0000910;gbkey=CDS;gene=ftsX;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229282.1;locus_tag=PHA56_RS01550;product=permease-like cell division protein FtsX;protein_id=WP_014227095.1;transl_table=11 NZ_CP116214.1 RefSeq gene 334619 335473 . + . ID=gene-PHA56_RS01555;Name=rpoH;gbkey=Gene;gene=rpoH;gene_biotype=protein_coding;locus_tag=PHA56_RS01555;old_locus_tag=PHA56_01555 NZ_CP116214.1 Protein Homology CDS 334619 335473 . + 0 ID=cds-WP_004106554.1;Parent=gene-PHA56_RS01555;Dbxref=Genbank:WP_004106554.1;Name=WP_004106554.1;Ontology_term=GO:0006352,GO:0016987;gbkey=CDS;gene=rpoH;go_function=sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008458573.1;locus_tag=PHA56_RS01555;product=RNA polymerase sigma factor RpoH;protein_id=WP_004106554.1;transl_table=11 NZ_CP116214.1 RefSeq gene 335506 337020 . - . ID=gene-PHA56_RS01560;Name=PHA56_RS01560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS01560;old_locus_tag=PHA56_01560 NZ_CP116214.1 Protein Homology CDS 335506 337020 . - 0 ID=cds-WP_014227094.1;Parent=gene-PHA56_RS01560;Dbxref=Genbank:WP_014227094.1;Name=WP_014227094.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229280.1;locus_tag=PHA56_RS01560;product=PLP-dependent aminotransferase family protein;protein_id=WP_014227094.1;transl_table=11 NZ_CP116214.1 RefSeq gene 337138 338403 . + . ID=gene-PHA56_RS01565;Name=PHA56_RS01565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS01565;old_locus_tag=PHA56_01565 NZ_CP116214.1 Protein Homology CDS 337138 338403 . + 0 ID=cds-WP_014839711.1;Parent=gene-PHA56_RS01565;Dbxref=Genbank:WP_014839711.1;Name=WP_014839711.1;Ontology_term=GO:0009448,GO:0003867,GO:0030170;gbkey=CDS;go_function=4-aminobutyrate transaminase activity|0003867||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=gamma-aminobutyric acid metabolic process|0009448||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014227093.1;locus_tag=PHA56_RS01565;product=4-aminobutyrate--2-oxoglutarate transaminase;protein_id=WP_014839711.1;transl_table=11 NZ_CP116214.1 RefSeq gene 338802 339806 . - . ID=gene-PHA56_RS01570;Name=PHA56_RS01570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS01570;old_locus_tag=PHA56_01570 NZ_CP116214.1 Protein Homology CDS 338802 339806 . - 0 ID=cds-WP_000427623.1;Parent=gene-PHA56_RS01570;Dbxref=Genbank:WP_000427623.1;Name=WP_000427623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229637.1;locus_tag=PHA56_RS01570;product=IS110-like element IS4321 family transposase;protein_id=WP_000427623.1;transl_table=11 NZ_CP116214.1 RefSeq gene 339880 341124 . + . ID=gene-PHA56_RS01575;Name=PHA56_RS01575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS01575;old_locus_tag=PHA56_01575 NZ_CP116214.1 Protein Homology CDS 339880 341124 . + 0 ID=cds-WP_038423782.1;Parent=gene-PHA56_RS01575;Dbxref=Genbank:WP_038423782.1;Name=WP_038423782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229278.1;locus_tag=PHA56_RS01575;product=amino acid permease;protein_id=WP_038423782.1;transl_table=11 NZ_CP116214.1 RefSeq gene 341381 342484 . + . ID=gene-PHA56_RS01580;Name=PHA56_RS01580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS01580;old_locus_tag=PHA56_01580 NZ_CP116214.1 Protein Homology CDS 341381 342484 . + 0 ID=cds-WP_014227091.1;Parent=gene-PHA56_RS01580;Dbxref=Genbank:WP_014227091.1;Name=WP_014227091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229277.1;locus_tag=PHA56_RS01580;product=branched-chain amino acid ABC transporter substrate-binding protein;protein_id=WP_014227091.1;transl_table=11 NZ_CP116214.1 RefSeq gene 343855 344241 . - . ID=gene-PHA56_RS01585;Name=panM;gbkey=Gene;gene=panM;gene_biotype=protein_coding;locus_tag=PHA56_RS01585;old_locus_tag=PHA56_01585 NZ_CP116214.1 Protein Homology CDS 343855 344241 . - 0 ID=cds-WP_025107865.1;Parent=gene-PHA56_RS01585;Dbxref=Genbank:WP_025107865.1;Name=WP_025107865.1;Ontology_term=GO:0015940,GO:0031638,GO:0008080;gbkey=CDS;gene=panM;go_function=N-acetyltransferase activity|0008080||IEA;go_process=pantothenate biosynthetic process|0015940||IEA,zymogen activation|0031638||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014227090.1;locus_tag=PHA56_RS01585;product=aspartate 1-decarboxylase autocleavage activator PanM;protein_id=WP_025107865.1;transl_table=11 NZ_CP116214.1 RefSeq gene 344662 345771 . + . ID=gene-PHA56_RS01590;Name=livK;gbkey=Gene;gene=livK;gene_biotype=protein_coding;locus_tag=PHA56_RS01590;old_locus_tag=PHA56_01590 NZ_CP116214.1 Protein Homology CDS 344662 345771 . + 0 ID=cds-WP_014227089.1;Parent=gene-PHA56_RS01590;Dbxref=Genbank:WP_014227089.1;Name=WP_014227089.1;gbkey=CDS;gene=livK;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229273.1;locus_tag=PHA56_RS01590;product=high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK;protein_id=WP_014227089.1;transl_table=11 NZ_CP116214.1 RefSeq gene 345832 346758 . + . ID=gene-PHA56_RS01595;Name=livH;gbkey=Gene;gene=livH;gene_biotype=protein_coding;locus_tag=PHA56_RS01595;old_locus_tag=PHA56_01595 NZ_CP116214.1 Protein Homology CDS 345832 346758 . + 0 ID=cds-WP_014227088.1;Parent=gene-PHA56_RS01595;Dbxref=Genbank:WP_014227088.1;Name=WP_014227088.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=livH;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010436488.1;locus_tag=PHA56_RS01595;product=high-affinity branched-chain amino acid ABC transporter permease LivH;protein_id=WP_014227088.1;transl_table=11 NZ_CP116214.1 RefSeq gene 346755 348035 . + . ID=gene-PHA56_RS01600;Name=livM;gbkey=Gene;gene=livM;gene_biotype=protein_coding;locus_tag=PHA56_RS01600;old_locus_tag=PHA56_01600 NZ_CP116214.1 Protein Homology CDS 346755 348035 . + 0 ID=cds-WP_014227087.1;Parent=gene-PHA56_RS01600;Dbxref=Genbank:WP_014227087.1;Name=WP_014227087.1;gbkey=CDS;gene=livM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000803755.1;locus_tag=PHA56_RS01600;product=branched chain amino acid ABC transporter permease LivM;protein_id=WP_014227087.1;transl_table=11 NZ_CP116214.1 RefSeq gene 348032 348799 . + . ID=gene-PHA56_RS01605;Name=livG;gbkey=Gene;gene=livG;gene_biotype=protein_coding;locus_tag=PHA56_RS01605;old_locus_tag=PHA56_01605 NZ_CP116214.1 Protein Homology CDS 348032 348799 . + 0 ID=cds-WP_004855045.1;Parent=gene-PHA56_RS01605;Dbxref=Genbank:WP_004855045.1;Name=WP_004855045.1;gbkey=CDS;gene=livG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000084170.1;locus_tag=PHA56_RS01605;product=high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG;protein_id=WP_004855045.1;transl_table=11 NZ_CP116214.1 RefSeq gene 348817 349530 . + . ID=gene-PHA56_RS01610;Name=livF;gbkey=Gene;gene=livF;gene_biotype=protein_coding;locus_tag=PHA56_RS01610;old_locus_tag=PHA56_01610 NZ_CP116214.1 Protein Homology CDS 348817 349530 . + 0 ID=cds-WP_004126158.1;Parent=gene-PHA56_RS01610;Dbxref=Genbank:WP_004126158.1;Name=WP_004126158.1;gbkey=CDS;gene=livF;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229269.1;locus_tag=PHA56_RS01610;product=high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF;protein_id=WP_004126158.1;transl_table=11 NZ_CP116214.1 RefSeq gene 349575 351170 . - . ID=gene-PHA56_RS01615;Name=PHA56_RS01615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS01615;old_locus_tag=PHA56_01615 NZ_CP116214.1 Protein Homology CDS 349575 351170 . - 0 ID=cds-WP_038423780.1;Parent=gene-PHA56_RS01615;Dbxref=Genbank:WP_038423780.1;Name=WP_038423780.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004870187.1;locus_tag=PHA56_RS01615;product=altronate dehydratase family protein;protein_id=WP_038423780.1;transl_table=11 NZ_CP116214.1 RefSeq gene 351204 352514 . - . ID=gene-PHA56_RS01620;Name=PHA56_RS01620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS01620;old_locus_tag=PHA56_01620 NZ_CP116214.1 Protein Homology CDS 351204 352514 . - 0 ID=cds-WP_009654269.1;Parent=gene-PHA56_RS01620;Dbxref=Genbank:WP_009654269.1;Name=WP_009654269.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004116060.1;locus_tag=PHA56_RS01620;product=MFS transporter;protein_id=WP_009654269.1;transl_table=11 NZ_CP116214.1 RefSeq gene 352533 353432 . - . ID=gene-PHA56_RS01625;Name=PHA56_RS01625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS01625;old_locus_tag=PHA56_01625 NZ_CP116214.1 Protein Homology CDS 352533 353432 . - 0 ID=cds-WP_014227085.1;Parent=gene-PHA56_RS01625;Dbxref=Genbank:WP_014227085.1;Name=WP_014227085.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004106528.1;locus_tag=PHA56_RS01625;product=dihydrodipicolinate synthase family protein;protein_id=WP_014227085.1;transl_table=11 NZ_CP116214.1 RefSeq gene 353661 354428 . - . ID=gene-PHA56_RS01630;Name=PHA56_RS01630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS01630;old_locus_tag=PHA56_01630 NZ_CP116214.1 Protein Homology CDS 353661 354428 . - 0 ID=cds-WP_014227084.1;Parent=gene-PHA56_RS01630;Dbxref=Genbank:WP_014227084.1;Name=WP_014227084.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015585596.1;locus_tag=PHA56_RS01630;product=IclR family transcriptional regulator;protein_id=WP_014227084.1;transl_table=11 NZ_CP116214.1 RefSeq gene 354700 356016 . + . ID=gene-PHA56_RS01635;Name=ugpB;gbkey=Gene;gene=ugpB;gene_biotype=protein_coding;locus_tag=PHA56_RS01635;old_locus_tag=PHA56_01635 NZ_CP116214.1 Protein Homology CDS 354700 356016 . + 0 ID=cds-WP_004855028.1;Parent=gene-PHA56_RS01635;Dbxref=Genbank:WP_004855028.1;Name=WP_004855028.1;Ontology_term=GO:0055085;gbkey=CDS;gene=ugpB;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229266.1;locus_tag=PHA56_RS01635;product=sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB;protein_id=WP_004855028.1;transl_table=11 NZ_CP116214.1 RefSeq gene 356138 357025 . + . ID=gene-PHA56_RS01640;Name=ugpA;gbkey=Gene;gene=ugpA;gene_biotype=protein_coding;locus_tag=PHA56_RS01640;old_locus_tag=PHA56_01640 NZ_CP116214.1 Protein Homology CDS 356138 357025 . + 0 ID=cds-WP_004126134.1;Parent=gene-PHA56_RS01640;Dbxref=Genbank:WP_004126134.1;Name=WP_004126134.1;gbkey=CDS;gene=ugpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000099274.1;locus_tag=PHA56_RS01640;product=sn-glycerol-3-phosphate ABC transporter permease UgpA;protein_id=WP_004126134.1;transl_table=11 NZ_CP116214.1 RefSeq gene 357022 357867 . + . ID=gene-PHA56_RS01645;Name=ugpE;gbkey=Gene;gene=ugpE;gene_biotype=protein_coding;locus_tag=PHA56_RS01645;old_locus_tag=PHA56_01645 NZ_CP116214.1 Protein Homology CDS 357022 357867 . + 0 ID=cds-WP_004116045.1;Parent=gene-PHA56_RS01645;Dbxref=Genbank:WP_004116045.1;Name=WP_004116045.1;Ontology_term=GO:0015794,GO:0005886,GO:0055052;gbkey=CDS;gene=ugpE;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_process=glycerol-3-phosphate transmembrane transport|0015794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000572177.1;locus_tag=PHA56_RS01645;product=sn-glycerol-3-phosphate ABC transporter permease UgpE;protein_id=WP_004116045.1;transl_table=11 NZ_CP116214.1 RefSeq gene 357869 358939 . + . ID=gene-PHA56_RS01650;Name=PHA56_RS01650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS01650;old_locus_tag=PHA56_01650 NZ_CP116214.1 Protein Homology CDS 357869 358939 . + 0 ID=cds-WP_025107858.1;Parent=gene-PHA56_RS01650;Dbxref=Genbank:WP_025107858.1;Name=WP_025107858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229263.1;locus_tag=PHA56_RS01650;product=sn-glycerol-3-phosphate import ATP-binding protein UgpC;protein_id=WP_025107858.1;transl_table=11 NZ_CP116214.1 RefSeq gene 358936 359676 . + . ID=gene-PHA56_RS01655;Name=ugpQ;gbkey=Gene;gene=ugpQ;gene_biotype=protein_coding;locus_tag=PHA56_RS01655;old_locus_tag=PHA56_01655 NZ_CP116214.1 Protein Homology CDS 358936 359676 . + 0 ID=cds-WP_014227082.1;Parent=gene-PHA56_RS01655;Dbxref=Genbank:WP_014227082.1;Name=WP_014227082.1;Ontology_term=GO:0006629,GO:0008081;gbkey=CDS;gene=ugpQ;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004855019.1;locus_tag=PHA56_RS01655;product=glycerophosphodiester phosphodiesterase;protein_id=WP_014227082.1;transl_table=11 NZ_CP116214.1 RefSeq gene 359700 360020 . - . ID=gene-PHA56_RS01660;Name=PHA56_RS01660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS01660;old_locus_tag=PHA56_01660 NZ_CP116214.1 Protein Homology CDS 359700 360020 . - 0 ID=cds-WP_014227081.1;Parent=gene-PHA56_RS01660;Dbxref=Genbank:WP_014227081.1;Name=WP_014227081.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004150073.1;locus_tag=PHA56_RS01660;product=DUF2756 family protein;protein_id=WP_014227081.1;transl_table=11 NZ_CP116214.1 RefSeq gene 360141 361883 . + . ID=gene-PHA56_RS01665;Name=ggt;gbkey=Gene;gene=ggt;gene_biotype=protein_coding;locus_tag=PHA56_RS01665;old_locus_tag=PHA56_01665 NZ_CP116214.1 Protein Homology CDS 360141 361883 . + 0 ID=cds-WP_004855015.1;Parent=gene-PHA56_RS01665;Dbxref=Genbank:WP_004855015.1;Name=WP_004855015.1;Ontology_term=GO:0006751,GO:0036374;gbkey=CDS;gene=ggt;go_function=glutathione hydrolase activity|0036374||IEA;go_process=glutathione catabolic process|0006751||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229260.1;locus_tag=PHA56_RS01665;product=gamma-glutamyltransferase;protein_id=WP_004855015.1;transl_table=11 NZ_CP116214.1 RefSeq gene 361934 362425 . - . ID=gene-PHA56_RS01670;Name=yhhY;gbkey=Gene;gene=yhhY;gene_biotype=protein_coding;locus_tag=PHA56_RS01670;old_locus_tag=PHA56_01670 NZ_CP116214.1 Protein Homology CDS 361934 362425 . - 0 ID=cds-WP_014839699.1;Parent=gene-PHA56_RS01670;Dbxref=Genbank:WP_014839699.1;Name=WP_014839699.1;Ontology_term=GO:0008080;gbkey=CDS;gene=yhhY;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004126120.1;locus_tag=PHA56_RS01670;product=N-acetyltransferase;protein_id=WP_014839699.1;transl_table=11 NZ_CP116214.1 RefSeq gene 362672 363310 . - . ID=gene-PHA56_RS01675;Name=PHA56_RS01675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS01675;old_locus_tag=PHA56_01675 NZ_CP116214.1 Protein Homology CDS 362672 363310 . - 0 ID=cds-WP_014227078.1;Parent=gene-PHA56_RS01675;Dbxref=Genbank:WP_014227078.1;Name=WP_014227078.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004126117.1;locus_tag=PHA56_RS01675;product=polymer-forming cytoskeletal protein;protein_id=WP_014227078.1;transl_table=11 NZ_CP116214.1 RefSeq gene 363564 364601 . + . ID=gene-PHA56_RS01680;Name=PHA56_RS01680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS01680;old_locus_tag=PHA56_01680 NZ_CP116214.1 Protein Homology CDS 363564 364601 . + 0 ID=cds-WP_014227077.1;Parent=gene-PHA56_RS01680;Dbxref=Genbank:WP_014227077.1;Name=WP_014227077.1;Ontology_term=GO:0000166;gbkey=CDS;go_function=nucleotide binding|0000166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229257.1;locus_tag=PHA56_RS01680;product=oxidoreductase;protein_id=WP_014227077.1;transl_table=11 NZ_CP116214.1 RefSeq gene 364723 365418 . + . ID=gene-PHA56_RS01685;Name=PHA56_RS01685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS01685;old_locus_tag=PHA56_01685 NZ_CP116214.1 Protein Homology CDS 364723 365418 . + 0 ID=cds-WP_004855003.1;Parent=gene-PHA56_RS01685;Dbxref=Genbank:WP_004855003.1;Name=WP_004855003.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004213399.1;locus_tag=PHA56_RS01685;product=pirin family protein;protein_id=WP_004855003.1;transl_table=11 NZ_CP116214.1 RefSeq gene 365533 366528 . + . ID=gene-PHA56_RS01690;Name=gntR;gbkey=Gene;gene=gntR;gene_biotype=protein_coding;locus_tag=PHA56_RS01690;old_locus_tag=PHA56_01690 NZ_CP116214.1 Protein Homology CDS 365533 366528 . + 0 ID=cds-WP_004106498.1;Parent=gene-PHA56_RS01690;Dbxref=Genbank:WP_004106498.1;Name=WP_004106498.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=gntR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001693277.1;locus_tag=PHA56_RS01690;product=gluconate operon transcriptional repressor GntR;protein_id=WP_004106498.1;transl_table=11 NZ_CP116214.1 RefSeq gene 366710 367240 . + . ID=gene-PHA56_RS01695;Name=gntK;gbkey=Gene;gene=gntK;gene_biotype=protein_coding;locus_tag=PHA56_RS01695;old_locus_tag=PHA56_01695 NZ_CP116214.1 Protein Homology CDS 366710 367240 . + 0 ID=cds-WP_032694236.1;Parent=gene-PHA56_RS01695;Dbxref=Genbank:WP_032694236.1;Name=WP_032694236.1;gbkey=CDS;gene=gntK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004126110.1;locus_tag=PHA56_RS01695;product=gluconokinase;protein_id=WP_032694236.1;transl_table=11 NZ_CP116214.1 RefSeq gene 367240 368580 . + . ID=gene-PHA56_RS01700;Name=gntU;gbkey=Gene;gene=gntU;gene_biotype=protein_coding;locus_tag=PHA56_RS01700;old_locus_tag=PHA56_01700 NZ_CP116214.1 Protein Homology CDS 367240 368580 . + 0 ID=cds-WP_014227075.1;Parent=gene-PHA56_RS01700;Dbxref=Genbank:WP_014227075.1;Name=WP_014227075.1;Ontology_term=GO:0035429,GO:0015128,GO:0016020;gbkey=CDS;gene=gntU;go_component=membrane|0016020||IEA;go_function=gluconate transmembrane transporter activity|0015128||IEA;go_process=gluconate transmembrane transport|0035429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229253.1;locus_tag=PHA56_RS01700;product=gluconate transporter;protein_id=WP_014227075.1;transl_table=11 NZ_CP116214.1 RefSeq gene 369033 370139 . + . ID=gene-PHA56_RS01705;Name=asd;gbkey=Gene;gene=asd;gene_biotype=protein_coding;locus_tag=PHA56_RS01705;old_locus_tag=PHA56_01705 NZ_CP116214.1 Protein Homology CDS 369033 370139 . + 0 ID=cds-WP_271292949.1;Parent=gene-PHA56_RS01705;Dbxref=Genbank:WP_271292949.1;Name=WP_271292949.1;Ontology_term=GO:0009089,GO:0004073;gbkey=CDS;gene=asd;go_function=aspartate-semialdehyde dehydrogenase activity|0004073||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229251.1;locus_tag=PHA56_RS01705;product=aspartate-semialdehyde dehydrogenase;protein_id=WP_271292949.1;transl_table=11 NZ_CP116214.1 RefSeq gene 370388 372574 . + . ID=gene-PHA56_RS01710;Name=glgB;gbkey=Gene;gene=glgB;gene_biotype=protein_coding;locus_tag=PHA56_RS01710;old_locus_tag=PHA56_01710 NZ_CP116214.1 Protein Homology CDS 370388 372574 . + 0 ID=cds-WP_014227074.1;Parent=gene-PHA56_RS01710;Dbxref=Genbank:WP_014227074.1;Name=WP_014227074.1;Ontology_term=GO:0005978,GO:0003844;gbkey=CDS;gene=glgB;go_function=1%2C4-alpha-glucan branching enzyme activity|0003844||IEA;go_process=glycogen biosynthetic process|0005978||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229250.1;locus_tag=PHA56_RS01710;product=1%2C4-alpha-glucan branching enzyme;protein_id=WP_014227074.1;transl_table=11 NZ_CP116214.1 RefSeq gene 372571 374547 . + . ID=gene-PHA56_RS01715;Name=glgX;gbkey=Gene;gene=glgX;gene_biotype=protein_coding;locus_tag=PHA56_RS01715;old_locus_tag=PHA56_01715 NZ_CP116214.1 Protein Homology CDS 372571 374547 . + 0 ID=cds-WP_032719983.1;Parent=gene-PHA56_RS01715;Dbxref=Genbank:WP_032719983.1;Name=WP_032719983.1;Ontology_term=GO:0005980,GO:0004133;gbkey=CDS;gene=glgX;go_function=glycogen debranching enzyme activity|0004133||IEA;go_process=glycogen catabolic process|0005980||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229249.1;locus_tag=PHA56_RS01715;product=glycogen debranching protein GlgX;protein_id=WP_032719983.1;transl_table=11 NZ_CP116214.1 RefSeq gene 374628 375923 . + . ID=gene-PHA56_RS01720;Name=glgC;gbkey=Gene;gene=glgC;gene_biotype=protein_coding;locus_tag=PHA56_RS01720;old_locus_tag=PHA56_01720 NZ_CP116214.1 Protein Homology CDS 374628 375923 . + 0 ID=cds-WP_271292950.1;Parent=gene-PHA56_RS01720;Dbxref=Genbank:WP_271292950.1;Name=WP_271292950.1;Ontology_term=GO:0005978,GO:0008878;gbkey=CDS;gene=glgC;go_function=glucose-1-phosphate adenylyltransferase activity|0008878||IEA;go_process=glycogen biosynthetic process|0005978||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229248.1;locus_tag=PHA56_RS01720;product=glucose-1-phosphate adenylyltransferase;protein_id=WP_271292950.1;transl_table=11 NZ_CP116214.1 RefSeq gene 375923 377356 . + . ID=gene-PHA56_RS01725;Name=glgA;gbkey=Gene;gene=glgA;gene_biotype=protein_coding;locus_tag=PHA56_RS01725;old_locus_tag=PHA56_01725 NZ_CP116214.1 Protein Homology CDS 375923 377356 . + 0 ID=cds-WP_004854984.1;Parent=gene-PHA56_RS01725;Dbxref=Genbank:WP_004854984.1;Name=WP_004854984.1;Ontology_term=GO:0004373;gbkey=CDS;gene=glgA;go_function=glycogen (starch) synthase activity|0004373||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229247.1;locus_tag=PHA56_RS01725;product=glycogen synthase GlgA;protein_id=WP_004854984.1;transl_table=11 NZ_CP116214.1 RefSeq gene 377372 379819 . + . ID=gene-PHA56_RS01730;Name=glgP;gbkey=Gene;gene=glgP;gene_biotype=protein_coding;locus_tag=PHA56_RS01730;old_locus_tag=PHA56_01730 NZ_CP116214.1 Protein Homology CDS 377372 379819 . + 0 ID=cds-WP_014227071.1;Parent=gene-PHA56_RS01730;Dbxref=Genbank:WP_014227071.1;Name=WP_014227071.1;Ontology_term=GO:0005975,GO:0008184;gbkey=CDS;gene=glgP;go_function=glycogen phosphorylase activity|0008184||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229246.1;locus_tag=PHA56_RS01730;product=glycogen phosphorylase;protein_id=WP_014227071.1;transl_table=11 NZ_CP116214.1 RefSeq gene 379871 381379 . - . ID=gene-PHA56_RS01735;Name=glpD;gbkey=Gene;gene=glpD;gene_biotype=protein_coding;locus_tag=PHA56_RS01735;old_locus_tag=PHA56_01735 NZ_CP116214.1 Protein Homology CDS 379871 381379 . - 0 ID=cds-WP_004854978.1;Parent=gene-PHA56_RS01735;Dbxref=Genbank:WP_004854978.1;Name=WP_004854978.1;Ontology_term=GO:0006072,GO:0004368,GO:0009331;gbkey=CDS;gene=glpD;go_component=glycerol-3-phosphate dehydrogenase complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229244.1;locus_tag=PHA56_RS01735;product=glycerol-3-phosphate dehydrogenase;protein_id=WP_004854978.1;transl_table=11 NZ_CP116214.1 RefSeq gene 381592 381921 . + . ID=gene-PHA56_RS01740;Name=glpE;gbkey=Gene;gene=glpE;gene_biotype=protein_coding;locus_tag=PHA56_RS01740;old_locus_tag=PHA56_01740 NZ_CP116214.1 Protein Homology CDS 381592 381921 . + 0 ID=cds-WP_004126086.1;Parent=gene-PHA56_RS01740;Dbxref=Genbank:WP_004126086.1;Name=WP_004126086.1;Ontology_term=GO:0004792;gbkey=CDS;gene=glpE;go_function=thiosulfate sulfurtransferase activity|0004792||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004126086.1;locus_tag=PHA56_RS01740;product=thiosulfate sulfurtransferase GlpE;protein_id=WP_004126086.1;transl_table=11 NZ_CP116214.1 RefSeq gene 381981 382811 . + . ID=gene-PHA56_RS01745;Name=glpG;gbkey=Gene;gene=glpG;gene_biotype=protein_coding;locus_tag=PHA56_RS01745;old_locus_tag=PHA56_01745 NZ_CP116214.1 Protein Homology CDS 381981 382811 . + 0 ID=cds-WP_271292951.1;Parent=gene-PHA56_RS01745;Dbxref=Genbank:WP_271292951.1;Name=WP_271292951.1;Ontology_term=GO:0006508,GO:0004252,GO:0016020;gbkey=CDS;gene=glpG;go_component=membrane|0016020||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462426.1;locus_tag=PHA56_RS01745;product=rhomboid family intramembrane serine protease GlpG;protein_id=WP_271292951.1;transl_table=11 NZ_CP116214.1 RefSeq gene 382831 383589 . + . ID=gene-PHA56_RS01750;Name=PHA56_RS01750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS01750;old_locus_tag=PHA56_01750 NZ_CP116214.1 Protein Homology CDS 382831 383589 . + 0 ID=cds-WP_004106478.1;Parent=gene-PHA56_RS01750;Dbxref=Genbank:WP_004106478.1;Name=WP_004106478.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000815090.1;locus_tag=PHA56_RS01750;product=DeoR/GlpR family transcriptional regulator;protein_id=WP_004106478.1;transl_table=11 NZ_CP116214.1 RefSeq gene 383755 386460 . - . ID=gene-PHA56_RS01755;Name=malT;gbkey=Gene;gene=malT;gene_biotype=protein_coding;locus_tag=PHA56_RS01755;old_locus_tag=PHA56_01755 NZ_CP116214.1 Protein Homology CDS 383755 386460 . - 0 ID=cds-WP_004854971.1;Parent=gene-PHA56_RS01755;Dbxref=Genbank:WP_004854971.1;Name=WP_004854971.1;Ontology_term=GO:0006355,GO:0003677,GO:0005515;gbkey=CDS;gene=malT;go_function=DNA binding|0003677||IEA,protein binding|0005515||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000907024.1;locus_tag=PHA56_RS01755;product=HTH-type transcriptional regulator MalT;protein_id=WP_004854971.1;transl_table=11 NZ_CP116214.1 RefSeq gene 387080 389470 . + . ID=gene-PHA56_RS01760;Name=malP;gbkey=Gene;gene=malP;gene_biotype=protein_coding;locus_tag=PHA56_RS01760;old_locus_tag=PHA56_01760 NZ_CP116214.1 Protein Homology CDS 387080 389470 . + 0 ID=cds-WP_009654839.1;Parent=gene-PHA56_RS01760;Dbxref=Genbank:WP_009654839.1;Name=WP_009654839.1;Ontology_term=GO:0005975,GO:0008184,GO:0030170;gbkey=CDS;gene=malP;go_function=glycogen phosphorylase activity|0008184||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229239.1;locus_tag=PHA56_RS01760;product=maltodextrin phosphorylase;protein_id=WP_009654839.1;transl_table=11 NZ_CP116214.1 RefSeq gene 389481 391574 . + . ID=gene-PHA56_RS01765;Name=malQ;gbkey=Gene;gene=malQ;gene_biotype=protein_coding;locus_tag=PHA56_RS01765;old_locus_tag=PHA56_01765 NZ_CP116214.1 Protein Homology CDS 389481 391574 . + 0 ID=cds-WP_025107848.1;Parent=gene-PHA56_RS01765;Dbxref=Genbank:WP_025107848.1;Name=WP_025107848.1;Ontology_term=GO:0005975,GO:0004134;gbkey=CDS;gene=malQ;go_function=4-alpha-glucanotransferase activity|0004134||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229238.1;locus_tag=PHA56_RS01765;product=4-alpha-glucanotransferase;protein_id=WP_025107848.1;transl_table=11 NZ_CP116214.1 RefSeq gene 391635 393257 . - . ID=gene-PHA56_RS01770;Name=pckA;gbkey=Gene;gene=pckA;gene_biotype=protein_coding;locus_tag=PHA56_RS01770;old_locus_tag=PHA56_01770 NZ_CP116214.1 Protein Homology CDS 391635 393257 . - 0 ID=cds-WP_014227066.1;Parent=gene-PHA56_RS01770;Dbxref=Genbank:WP_014227066.1;Name=WP_014227066.1;Ontology_term=GO:0006094,GO:0004612;gbkey=CDS;gene=pckA;go_function=phosphoenolpyruvate carboxykinase (ATP) activity|0004612||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229225.1;locus_tag=PHA56_RS01770;product=phosphoenolpyruvate carboxykinase (ATP);protein_id=WP_014227066.1;transl_table=11 NZ_CP116214.1 RefSeq gene 393606 394490 . - . ID=gene-PHA56_RS01775;Name=hslO;gbkey=Gene;gene=hslO;gene_biotype=protein_coding;locus_tag=PHA56_RS01775;old_locus_tag=PHA56_01775 NZ_CP116214.1 Protein Homology CDS 393606 394490 . - 0 ID=cds-WP_009654836.1;Parent=gene-PHA56_RS01775;Dbxref=Genbank:WP_009654836.1;Name=WP_009654836.1;Ontology_term=GO:0006457,GO:0051082;gbkey=CDS;gene=hslO;go_function=unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229223.1;locus_tag=PHA56_RS01775;product=Hsp33 family molecular chaperone HslO;protein_id=WP_009654836.1;transl_table=11 NZ_CP116214.1 RefSeq gene 394509 394910 . - . ID=gene-PHA56_RS01780;Name=hslR;gbkey=Gene;gene=hslR;gene_biotype=protein_coding;locus_tag=PHA56_RS01780;old_locus_tag=PHA56_01780 NZ_CP116214.1 Protein Homology CDS 394509 394910 . - 0 ID=cds-WP_014227064.1;Parent=gene-PHA56_RS01780;Dbxref=Genbank:WP_014227064.1;Name=WP_014227064.1;gbkey=CDS;gene=hslR;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229222.1;locus_tag=PHA56_RS01780;product=ribosome-associated heat shock protein Hsp15;protein_id=WP_014227064.1;transl_table=11 NZ_CP116214.1 RefSeq gene 394907 395590 . - . ID=gene-PHA56_RS01785;Name=yrfG;gbkey=Gene;gene=yrfG;gene_biotype=protein_coding;locus_tag=PHA56_RS01785;old_locus_tag=PHA56_01785 NZ_CP116214.1 Protein Homology CDS 394907 395590 . - 0 ID=cds-WP_004854954.1;Parent=gene-PHA56_RS01785;Dbxref=Genbank:WP_004854954.1;Name=WP_004854954.1;gbkey=CDS;gene=yrfG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004126058.1;locus_tag=PHA56_RS01785;product=GMP/IMP nucleotidase;protein_id=WP_004854954.1;transl_table=11 NZ_CP116214.1 RefSeq gene 395652 397781 . - . ID=gene-PHA56_RS01790;Name=PHA56_RS01790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS01790;old_locus_tag=PHA56_01790 NZ_CP116214.1 Protein Homology CDS 395652 397781 . - 0 ID=cds-WP_038423772.1;Parent=gene-PHA56_RS01790;Dbxref=Genbank:WP_038423772.1;Name=WP_038423772.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229220.1;locus_tag=PHA56_RS01790;product=intracellular growth attenuator family protein;protein_id=WP_038423772.1;transl_table=11 NZ_CP116214.1 RefSeq gene 398109 398669 . + . ID=gene-PHA56_RS01795;Name=nudE;gbkey=Gene;gene=nudE;gene_biotype=protein_coding;locus_tag=PHA56_RS01795;old_locus_tag=PHA56_01795 NZ_CP116214.1 Protein Homology CDS 398109 398669 . + 0 ID=cds-WP_004854946.1;Parent=gene-PHA56_RS01795;Dbxref=Genbank:WP_004854946.1;Name=WP_004854946.1;Ontology_term=GO:0016787;gbkey=CDS;gene=nudE;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312266.1;locus_tag=PHA56_RS01795;product=ADP compounds hydrolase NudE;protein_id=WP_004854946.1;transl_table=11 NZ_CP116214.1 RefSeq gene 398813 401371 . - . ID=gene-PHA56_RS01800;Name=mrcA;gbkey=Gene;gene=mrcA;gene_biotype=protein_coding;locus_tag=PHA56_RS01800;old_locus_tag=PHA56_01800 NZ_CP116214.1 Protein Homology CDS 398813 401371 . - 0 ID=cds-WP_009654857.1;Parent=gene-PHA56_RS01800;Dbxref=Genbank:WP_009654857.1;Name=WP_009654857.1;Ontology_term=GO:0008658;gbkey=CDS;gene=mrcA;go_function=penicillin binding|0008658||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312265.2;locus_tag=PHA56_RS01800;product=peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA;protein_id=WP_009654857.1;transl_table=11 NZ_CP116214.1 RefSeq gene 401489 402280 . + . ID=gene-PHA56_RS01805;Name=PHA56_RS01805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS01805;old_locus_tag=PHA56_01805 NZ_CP116214.1 Protein Homology CDS 401489 402280 . + 0 ID=cds-WP_032719987.1;Parent=gene-PHA56_RS01805;Dbxref=Genbank:WP_032719987.1;Name=WP_032719987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014227061.1;locus_tag=PHA56_RS01805;product=hypothetical protein;protein_id=WP_032719987.1;transl_table=11 NZ_CP116214.1 RefSeq gene 402277 402816 . + . ID=gene-PHA56_RS01810;Name=PHA56_RS01810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS01810;old_locus_tag=PHA56_01810 NZ_CP116214.1 Protein Homology CDS 402277 402816 . + 0 ID=cds-WP_014227060.1;Parent=gene-PHA56_RS01810;Dbxref=Genbank:WP_014227060.1;Name=WP_014227060.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014839687.1;locus_tag=PHA56_RS01810;product=PilN domain-containing protein;protein_id=WP_014227060.1;transl_table=11 NZ_CP116214.1 RefSeq gene 402800 403240 . + . ID=gene-PHA56_RS01815;Name=PHA56_RS01815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS01815;old_locus_tag=PHA56_01815 NZ_CP116214.1 Protein Homology CDS 402800 403240 . + 0 ID=cds-WP_032719988.1;Parent=gene-PHA56_RS01815;Dbxref=Genbank:WP_032719988.1;Name=WP_032719988.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014839686.1;locus_tag=PHA56_RS01815;product=hypothetical protein;protein_id=WP_032719988.1;transl_table=11 NZ_CP116214.1 RefSeq gene 403230 403637 . + . ID=gene-PHA56_RS01820;Name=PHA56_RS01820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS01820;old_locus_tag=PHA56_01820 NZ_CP116214.1 Protein Homology CDS 403230 403637 . + 0 ID=cds-WP_071889089.1;Parent=gene-PHA56_RS01820;Dbxref=Genbank:WP_071889089.1;Name=WP_071889089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014839685.1;locus_tag=PHA56_RS01820;product=HofP DNA utilization family protein;protein_id=WP_071889089.1;transl_table=11 NZ_CP116214.1 RefSeq gene 403546 404787 . + . ID=gene-PHA56_RS01825;Name=hofQ;gbkey=Gene;gene=hofQ;gene_biotype=protein_coding;locus_tag=PHA56_RS01825;old_locus_tag=PHA56_01825 NZ_CP116214.1 Protein Homology CDS 403546 404787 . + 0 ID=cds-WP_032719989.1;Parent=gene-PHA56_RS01825;Dbxref=Genbank:WP_032719989.1;Name=WP_032719989.1;Ontology_term=GO:0009306,GO:0019867;gbkey=CDS;gene=hofQ;go_component=outer membrane|0019867||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014227057.1;locus_tag=PHA56_RS01825;product=DNA uptake porin HofQ;protein_id=WP_032719989.1;transl_table=11 NZ_CP116214.1 RefSeq gene 405058 405579 . + . ID=gene-PHA56_RS01830;Name=aroK;gbkey=Gene;gene=aroK;gene_biotype=protein_coding;locus_tag=PHA56_RS01830;old_locus_tag=PHA56_01830 NZ_CP116214.1 Protein Homology CDS 405058 405579 . + 0 ID=cds-WP_004106441.1;Parent=gene-PHA56_RS01830;Dbxref=Genbank:WP_004106441.1;Name=WP_004106441.1;gbkey=CDS;gene=aroK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004709337.1;locus_tag=PHA56_RS01830;product=shikimate kinase AroK;protein_id=WP_004106441.1;transl_table=11 NZ_CP116214.1 RefSeq gene 405634 406728 . + . ID=gene-PHA56_RS01835;Name=aroB;gbkey=Gene;gene=aroB;gene_biotype=protein_coding;locus_tag=PHA56_RS01835;old_locus_tag=PHA56_01835 NZ_CP116214.1 Protein Homology CDS 405634 406728 . + 0 ID=cds-WP_004854923.1;Parent=gene-PHA56_RS01835;Dbxref=Genbank:WP_004854923.1;Name=WP_004854923.1;Ontology_term=GO:0009423,GO:0003856;gbkey=CDS;gene=aroB;go_function=3-dehydroquinate synthase activity|0003856||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017145321.1;locus_tag=PHA56_RS01835;product=3-dehydroquinate synthase;protein_id=WP_004854923.1;transl_table=11 NZ_CP116214.1 RefSeq gene 406813 408108 . + . ID=gene-PHA56_RS01840;Name=damX;gbkey=Gene;gene=damX;gene_biotype=protein_coding;locus_tag=PHA56_RS01840;old_locus_tag=PHA56_01840 NZ_CP116214.1 Protein Homology CDS 406813 408108 . + 0 ID=cds-WP_032693741.1;Parent=gene-PHA56_RS01840;Dbxref=Genbank:WP_032693741.1;Name=WP_032693741.1;Ontology_term=GO:0032506,GO:0042834;gbkey=CDS;gene=damX;go_function=peptidoglycan binding|0042834||IEA;go_process=cytokinetic process|0032506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229211.1;locus_tag=PHA56_RS01840;product=cell division protein DamX;protein_id=WP_032693741.1;transl_table=11 NZ_CP116214.1 RefSeq gene 408187 409014 . + . ID=gene-PHA56_RS01845;Name=dam;gbkey=Gene;gene=dam;gene_biotype=protein_coding;locus_tag=PHA56_RS01845;old_locus_tag=PHA56_01845 NZ_CP116214.1 Protein Homology CDS 408187 409014 . + 0 ID=cds-WP_014227055.1;Parent=gene-PHA56_RS01845;Dbxref=Genbank:WP_014227055.1;Name=WP_014227055.1;Ontology_term=GO:0032775,GO:0003676,GO:0009007;gbkey=CDS;gene=dam;go_function=nucleic acid binding|0003676||IEA,site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA;go_process=DNA methylation on adenine|0032775||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229210.1;locus_tag=PHA56_RS01845;product=adenine-specific DNA-methyltransferase;protein_id=WP_014227055.1;transl_table=11 NZ_CP116214.1 RefSeq gene 409032 409709 . + . ID=gene-PHA56_RS01850;Name=rpe;gbkey=Gene;gene=rpe;gene_biotype=protein_coding;locus_tag=PHA56_RS01850;old_locus_tag=PHA56_01850 NZ_CP116214.1 Protein Homology CDS 409032 409709 . + 0 ID=cds-WP_004126039.1;Parent=gene-PHA56_RS01850;Dbxref=Genbank:WP_004126039.1;Name=WP_004126039.1;Ontology_term=GO:0006098,GO:0004750;gbkey=CDS;gene=rpe;go_function=D-ribulose-phosphate 3-epimerase activity|0004750||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462386.1;locus_tag=PHA56_RS01850;product=ribulose-phosphate 3-epimerase;protein_id=WP_004126039.1;transl_table=11 NZ_CP116214.1 RefSeq gene 409702 410451 . + . ID=gene-PHA56_RS01855;Name=gph;gbkey=Gene;gene=gph;gene_biotype=protein_coding;locus_tag=PHA56_RS01855;old_locus_tag=PHA56_01855 NZ_CP116214.1 Protein Homology CDS 409702 410451 . + 0 ID=cds-WP_025107839.1;Parent=gene-PHA56_RS01855;Dbxref=Genbank:WP_025107839.1;Name=WP_025107839.1;Ontology_term=GO:0005975,GO:0008967;gbkey=CDS;gene=gph;go_function=phosphoglycolate phosphatase activity|0008967||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004854912.1;locus_tag=PHA56_RS01855;product=phosphoglycolate phosphatase;protein_id=WP_025107839.1;transl_table=11 NZ_CP116214.1 RefSeq gene 410455 411459 . + . ID=gene-PHA56_RS01860;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=PHA56_RS01860;old_locus_tag=PHA56_01860 NZ_CP116214.1 Protein Homology CDS 410455 411459 . + 0 ID=cds-WP_004854910.1;Parent=gene-PHA56_RS01860;Dbxref=Genbank:WP_004854910.1;Name=WP_004854910.1;Ontology_term=GO:0006436,GO:0004830,GO:0005737;gbkey=CDS;gene=trpS;go_component=cytoplasm|0005737||IEA;go_function=tryptophan-tRNA ligase activity|0004830||IEA;go_process=tryptophanyl-tRNA aminoacylation|0006436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229207.1;locus_tag=PHA56_RS01860;product=tryptophan--tRNA ligase;protein_id=WP_004854910.1;transl_table=11 NZ_CP116214.1 RefSeq gene 411549 412922 . - . ID=gene-PHA56_RS01865;Name=cysG;gbkey=Gene;gene=cysG;gene_biotype=protein_coding;locus_tag=PHA56_RS01865;old_locus_tag=PHA56_01865 NZ_CP116214.1 Protein Homology CDS 411549 412922 . - 0 ID=cds-WP_271292952.1;Parent=gene-PHA56_RS01865;Dbxref=Genbank:WP_271292952.1;Name=WP_271292952.1;Ontology_term=GO:0019354,GO:0004851,GO:0043115,GO:0051266,GO:0051287;gbkey=CDS;gene=cysG;go_function=uroporphyrin-III C-methyltransferase activity|0004851||IEA,precorrin-2 dehydrogenase activity|0043115||IEA,sirohydrochlorin ferrochelatase activity|0051266||IEA,NAD binding|0051287||IEA;go_process=siroheme biosynthetic process|0019354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229206.1;locus_tag=PHA56_RS01865;product=siroheme synthase CysG;protein_id=WP_271292952.1;transl_table=11 NZ_CP116214.1 RefSeq gene 413030 413836 . - . ID=gene-PHA56_RS01870;Name=nirC;gbkey=Gene;gene=nirC;gene_biotype=protein_coding;locus_tag=PHA56_RS01870;old_locus_tag=PHA56_01870 NZ_CP116214.1 Protein Homology CDS 413030 413836 . - 0 ID=cds-WP_014227053.1;Parent=gene-PHA56_RS01870;Dbxref=Genbank:WP_014227053.1;Name=WP_014227053.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=nirC;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016810005.1;locus_tag=PHA56_RS01870;product=nitrite transporter NirC;protein_id=WP_014227053.1;transl_table=11 NZ_CP116214.1 RefSeq gene 413973 414299 . - . ID=gene-PHA56_RS01875;Name=nirD;gbkey=Gene;gene=nirD;gene_biotype=protein_coding;locus_tag=PHA56_RS01875;old_locus_tag=PHA56_01875 NZ_CP116214.1 Protein Homology CDS 413973 414299 . - 0 ID=cds-WP_014227052.1;Parent=gene-PHA56_RS01875;Dbxref=Genbank:WP_014227052.1;Name=WP_014227052.1;gbkey=CDS;gene=nirD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229205.1;locus_tag=PHA56_RS01875;product=nitrite reductase small subunit NirD;protein_id=WP_014227052.1;transl_table=11 NZ_CP116214.1 RefSeq gene 414296 416839 . - . ID=gene-PHA56_RS01880;Name=nirB;gbkey=Gene;gene=nirB;gene_biotype=protein_coding;locus_tag=PHA56_RS01880;old_locus_tag=PHA56_01880 NZ_CP116214.1 Protein Homology CDS 414296 416839 . - 0 ID=cds-WP_014227051.1;Parent=gene-PHA56_RS01880;Dbxref=Genbank:WP_014227051.1;Name=WP_014227051.1;gbkey=CDS;gene=nirB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462377.1;locus_tag=PHA56_RS01880;product=NADPH-nitrite reductase large subunit;protein_id=WP_014227051.1;transl_table=11 NZ_CP116214.1 RefSeq gene 417080 418402 . + . ID=gene-PHA56_RS01885;Name=PHA56_RS01885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS01885;old_locus_tag=PHA56_01885 NZ_CP116214.1 Protein Homology CDS 417080 418402 . + 0 ID=cds-WP_009654835.1;Parent=gene-PHA56_RS01885;Dbxref=Genbank:WP_009654835.1;Name=WP_009654835.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229202.1;locus_tag=PHA56_RS01885;product=cytosine deaminase;protein_id=WP_009654835.1;transl_table=11 NZ_CP116214.1 RefSeq gene 418399 419583 . - . ID=gene-PHA56_RS01890;Name=tsgA;gbkey=Gene;gene=tsgA;gene_biotype=protein_coding;locus_tag=PHA56_RS01890;old_locus_tag=PHA56_01890 NZ_CP116214.1 Protein Homology CDS 418399 419583 . - 0 ID=cds-WP_004854892.1;Parent=gene-PHA56_RS01890;Dbxref=Genbank:WP_004854892.1;Name=WP_004854892.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=tsgA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229201.1;locus_tag=PHA56_RS01890;product=MFS transporter TsgA;protein_id=WP_004854892.1;transl_table=11 NZ_CP116214.1 RefSeq gene 419861 420430 . + . ID=gene-PHA56_RS01895;Name=ppiA;gbkey=Gene;gene=ppiA;gene_biotype=protein_coding;gene_synonym=rotA;locus_tag=PHA56_RS01895;old_locus_tag=PHA56_01895 NZ_CP116214.1 Protein Homology CDS 419861 420430 . + 0 ID=cds-WP_004854889.1;Parent=gene-PHA56_RS01895;Dbxref=Genbank:WP_004854889.1;Name=WP_004854889.1;gbkey=CDS;gene=ppiA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229200.1;locus_tag=PHA56_RS01895;product=peptidylprolyl isomerase A;protein_id=WP_004854889.1;transl_table=11 NZ_CP116214.1 RefSeq gene 420539 420706 . + . ID=gene-PHA56_RS01900;Name=PHA56_RS01900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS01900;old_locus_tag=PHA56_01900 NZ_CP116214.1 Protein Homology CDS 420539 420706 . + 0 ID=cds-WP_004854887.1;Parent=gene-PHA56_RS01900;Dbxref=Genbank:WP_004854887.1;Name=WP_004854887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312240.1;locus_tag=PHA56_RS01900;product=YhfG family protein;protein_id=WP_004854887.1;transl_table=11 NZ_CP116214.1 RefSeq gene 420696 421298 . + . ID=gene-PHA56_RS01905;Name=PHA56_RS01905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS01905;old_locus_tag=PHA56_01905 NZ_CP116214.1 Protein Homology CDS 420696 421298 . + 0 ID=cds-WP_014227050.1;Parent=gene-PHA56_RS01905;Dbxref=Genbank:WP_014227050.1;Name=WP_014227050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462373.1;locus_tag=PHA56_RS01905;product=putative adenosine monophosphate-protein transferase Fic;protein_id=WP_014227050.1;transl_table=11 NZ_CP116214.1 RefSeq gene 421330 421893 . + . ID=gene-PHA56_RS01910;Name=pabA;gbkey=Gene;gene=pabA;gene_biotype=protein_coding;locus_tag=PHA56_RS01910;old_locus_tag=PHA56_01910 NZ_CP116214.1 Protein Homology CDS 421330 421893 . + 0 ID=cds-WP_014227049.1;Parent=gene-PHA56_RS01910;Dbxref=Genbank:WP_014227049.1;Name=WP_014227049.1;gbkey=CDS;gene=pabA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229197.1;locus_tag=PHA56_RS01910;product=aminodeoxychorismate synthase component 2;protein_id=WP_014227049.1;transl_table=11 NZ_CP116214.1 RefSeq gene 421983 423203 . + . ID=gene-PHA56_RS01915;Name=PHA56_RS01915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS01915;old_locus_tag=PHA56_01915 NZ_CP116214.1 Protein Homology CDS 421983 423203 . + 0 ID=cds-WP_119834672.1;Parent=gene-PHA56_RS01915;Dbxref=Genbank:WP_119834672.1;Name=WP_119834672.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417818.1;locus_tag=PHA56_RS01915;product=aspartate aminotransferase family protein;protein_id=WP_119834672.1;transl_table=11 NZ_CP116214.1 RefSeq gene 423193 425271 . - . ID=gene-PHA56_RS01920;Name=PHA56_RS01920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS01920;old_locus_tag=PHA56_01920 NZ_CP116214.1 Protein Homology CDS 423193 425271 . - 0 ID=cds-WP_271292953.1;Parent=gene-PHA56_RS01920;Dbxref=Genbank:WP_271292953.1;Name=WP_271292953.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229195.1;locus_tag=PHA56_RS01920;product=YccS/YhfK family putative transporter;protein_id=WP_271292953.1;transl_table=11 NZ_CP116214.1 RefSeq gene 425323 425955 . - . ID=gene-PHA56_RS01925;Name=crp;gbkey=Gene;gene=crp;gene_biotype=protein_coding;locus_tag=PHA56_RS01925;old_locus_tag=PHA56_01925 NZ_CP116214.1 Protein Homology CDS 425323 425955 . - 0 ID=cds-WP_000242758.1;Parent=gene-PHA56_RS01925;Dbxref=Genbank:WP_000242758.1;Name=WP_000242758.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=crp;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016506431.1;locus_tag=PHA56_RS01925;product=cAMP-activated global transcriptional regulator CRP;protein_id=WP_000242758.1;transl_table=11 NZ_CP116214.1 RefSeq gene 426260 426664 . + . ID=gene-PHA56_RS01930;Name=PHA56_RS01930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS01930;old_locus_tag=PHA56_01930 NZ_CP116214.1 Protein Homology CDS 426260 426664 . + 0 ID=cds-WP_004854875.1;Parent=gene-PHA56_RS01930;Dbxref=Genbank:WP_004854875.1;Name=WP_004854875.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004854875.1;locus_tag=PHA56_RS01930;product=OsmC family protein;protein_id=WP_004854875.1;transl_table=11 NZ_CP116214.1 RefSeq gene 426708 427580 . - . ID=gene-PHA56_RS01935;Name=PHA56_RS01935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS01935;old_locus_tag=PHA56_01935 NZ_CP116214.1 Protein Homology CDS 426708 427580 . - 0 ID=cds-WP_004854874.1;Parent=gene-PHA56_RS01935;Dbxref=Genbank:WP_004854874.1;Name=WP_004854874.1;Ontology_term=GO:0005975,GO:0005524,GO:0008974;gbkey=CDS;go_function=ATP binding|0005524||IEA,phosphoribulokinase activity|0008974||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004854874.1;locus_tag=PHA56_RS01935;product=phosphoribulokinase;protein_id=WP_004854874.1;transl_table=11 NZ_CP116214.1 RefSeq gene 427616 427834 . - . ID=gene-PHA56_RS01940;Name=PHA56_RS01940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS01940;old_locus_tag=PHA56_01940 NZ_CP116214.1 Protein Homology CDS 427616 427834 . - 0 ID=cds-WP_004125965.1;Parent=gene-PHA56_RS01940;Dbxref=Genbank:WP_004125965.1;Name=WP_004125965.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229191.1;locus_tag=PHA56_RS01940;product=YheU family protein;protein_id=WP_004125965.1;transl_table=11 NZ_CP116214.1 RefSeq gene 427831 428790 . - . ID=gene-PHA56_RS01945;Name=PHA56_RS01945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS01945;old_locus_tag=PHA56_01945 NZ_CP116214.1 Protein Homology CDS 427831 428790 . - 0 ID=cds-WP_231719137.1;Parent=gene-PHA56_RS01945;Dbxref=Genbank:WP_231719137.1;Name=WP_231719137.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012967146.1;locus_tag=PHA56_RS01945;product=hydrolase;protein_id=WP_231719137.1;transl_table=11 NZ_CP116214.1 RefSeq gene 428935 429654 . - . ID=gene-PHA56_RS01950;Name=PHA56_RS01950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS01950;old_locus_tag=PHA56_01950 NZ_CP116214.1 Protein Homology CDS 428935 429654 . - 0 ID=cds-WP_038423767.1;Parent=gene-PHA56_RS01950;Dbxref=Genbank:WP_038423767.1;Name=WP_038423767.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004386600.1;locus_tag=PHA56_RS01950;product=NUDIX domain-containing protein;protein_id=WP_038423767.1;transl_table=11 NZ_CP116214.1 RefSeq gene 429851 430720 . + . ID=gene-PHA56_RS01955;Name=prs;gbkey=Gene;gene=prs;gene_biotype=protein_coding;locus_tag=PHA56_RS01955;old_locus_tag=PHA56_01955 NZ_CP116214.1 Protein Homology CDS 429851 430720 . + 0 ID=cds-WP_014227045.1;Parent=gene-PHA56_RS01955;Dbxref=Genbank:WP_014227045.1;Name=WP_014227045.1;Ontology_term=GO:0009152,GO:0004749;gbkey=CDS;gene=prs;go_function=ribose phosphate diphosphokinase activity|0004749||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014839673.1;locus_tag=PHA56_RS01955;product=ribose-phosphate diphosphokinase;protein_id=WP_014227045.1;transl_table=11 NZ_CP116214.1 RefSeq gene 430725 432215 . + . ID=gene-PHA56_RS01960;Name=PHA56_RS01960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS01960;old_locus_tag=PHA56_01960 NZ_CP116214.1 Protein Homology CDS 430725 432215 . + 0 ID=cds-WP_038424924.1;Parent=gene-PHA56_RS01960;Dbxref=Genbank:WP_038424924.1;Name=WP_038424924.1;Ontology_term=GO:0009435,GO:0004514;gbkey=CDS;go_function=nicotinate-nucleotide diphosphorylase (carboxylating) activity|0004514||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014227044.1;locus_tag=PHA56_RS01960;product=nicotinate phosphoribosyltransferase;protein_id=WP_038424924.1;transl_table=11 NZ_CP116214.1 RefSeq gene 432277 434181 . - . ID=gene-PHA56_RS01965;Name=PHA56_RS01965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS01965;old_locus_tag=PHA56_01965 NZ_CP116214.1 Protein Homology CDS 432277 434181 . - 0 ID=cds-WP_004854860.1;Parent=gene-PHA56_RS01965;Dbxref=Genbank:WP_004854860.1;Name=WP_004854860.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229188.1;locus_tag=PHA56_RS01965;product=ABC transporter ATP-binding protein;protein_id=WP_004854860.1;transl_table=11 NZ_CP116214.1 RefSeq gene 434357 434917 . + . ID=gene-PHA56_RS01970;Name=kefG;gbkey=Gene;gene=kefG;gene_biotype=protein_coding;locus_tag=PHA56_RS01970;old_locus_tag=PHA56_01970 NZ_CP116214.1 Protein Homology CDS 434357 434917 . + 0 ID=cds-WP_004854856.1;Parent=gene-PHA56_RS01970;Dbxref=Genbank:WP_004854856.1;Name=WP_004854856.1;Ontology_term=GO:0006813;gbkey=CDS;gene=kefG;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004854856.1;locus_tag=PHA56_RS01970;product=glutathione-regulated potassium-efflux system ancillary protein KefG;protein_id=WP_004854856.1;transl_table=11 NZ_CP116214.1 RefSeq gene 434904 436709 . + . ID=gene-PHA56_RS01975;Name=kefB;gbkey=Gene;gene=kefB;gene_biotype=protein_coding;locus_tag=PHA56_RS01975;old_locus_tag=PHA56_01975 NZ_CP116214.1 Protein Homology CDS 434904 436709 . + 0 ID=cds-WP_014227043.1;Parent=gene-PHA56_RS01975;Dbxref=Genbank:WP_014227043.1;Name=WP_014227043.1;Ontology_term=GO:0006813,GO:0015503;gbkey=CDS;gene=kefB;go_function=glutathione-regulated potassium exporter activity|0015503||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020455504.1;locus_tag=PHA56_RS01975;product=glutathione-regulated potassium-efflux system protein KefB;protein_id=WP_014227043.1;transl_table=11 NZ_CP116214.1 RefSeq gene 436721 436921 . + . ID=gene-PHA56_RS01980;Name=PHA56_RS01980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS01980;old_locus_tag=PHA56_01980 NZ_CP116214.1 Protein Homology CDS 436721 436921 . + 0 ID=cds-WP_004106389.1;Parent=gene-PHA56_RS01980;Dbxref=Genbank:WP_004106389.1;Name=WP_004106389.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229185.1;locus_tag=PHA56_RS01980;product=YheV family putative zinc ribbon protein;protein_id=WP_004106389.1;transl_table=11 NZ_CP116214.1 RefSeq gene 437016 437603 . + . ID=gene-PHA56_RS01985;Name=slyD;gbkey=Gene;gene=slyD;gene_biotype=protein_coding;locus_tag=PHA56_RS01985;old_locus_tag=PHA56_01985 NZ_CP116214.1 Protein Homology CDS 437016 437603 . + 0 ID=cds-WP_014227042.1;Parent=gene-PHA56_RS01985;Dbxref=Genbank:WP_014227042.1;Name=WP_014227042.1;Ontology_term=GO:0003755;gbkey=CDS;gene=slyD;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229184.1;locus_tag=PHA56_RS01985;product=peptidylprolyl isomerase;protein_id=WP_014227042.1;transl_table=11 NZ_CP116214.1 RefSeq gene 437663 437881 . - . ID=gene-PHA56_RS01990;Name=PHA56_RS01990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS01990;old_locus_tag=PHA56_01990 NZ_CP116214.1 Protein Homology CDS 437663 437881 . - 0 ID=cds-WP_014227041.1;Parent=gene-PHA56_RS01990;Dbxref=Genbank:WP_014227041.1;Name=WP_014227041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229183.1;locus_tag=PHA56_RS01990;product=SlyX family protein;protein_id=WP_014227041.1;transl_table=11 NZ_CP116214.1 RefSeq gene 438104 438922 . + . ID=gene-PHA56_RS01995;Name=fkpA;gbkey=Gene;gene=fkpA;gene_biotype=protein_coding;locus_tag=PHA56_RS01995;old_locus_tag=PHA56_01995 NZ_CP116214.1 Protein Homology CDS 438104 438922 . + 0 ID=cds-WP_004854844.1;Parent=gene-PHA56_RS01995;Dbxref=Genbank:WP_004854844.1;Name=WP_004854844.1;Ontology_term=GO:0006457,GO:0003755;gbkey=CDS;gene=fkpA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008807040.1;locus_tag=PHA56_RS01995;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_004854844.1;transl_table=11 NZ_CP116214.1 RefSeq gene 439089 439811 . + . ID=gene-PHA56_RS02000;Name=PHA56_RS02000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS02000;old_locus_tag=PHA56_02000 NZ_CP116214.1 Protein Homology CDS 439089 439811 . + 0 ID=cds-WP_004106380.1;Parent=gene-PHA56_RS02000;Dbxref=Genbank:WP_004106380.1;Name=WP_004106380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229181.1;locus_tag=PHA56_RS02000;product=transcriptional regulator;protein_id=WP_004106380.1;transl_table=11 NZ_CP116214.1 RefSeq gene 439811 440197 . + . ID=gene-PHA56_RS02005;Name=tusD;gbkey=Gene;gene=tusD;gene_biotype=protein_coding;locus_tag=PHA56_RS02005;old_locus_tag=PHA56_02005 NZ_CP116214.1 Protein Homology CDS 439811 440197 . + 0 ID=cds-WP_014227040.1;Parent=gene-PHA56_RS02005;Dbxref=Genbank:WP_014227040.1;Name=WP_014227040.1;Ontology_term=GO:0008033,GO:0016783;gbkey=CDS;gene=tusD;go_function=sulfurtransferase activity|0016783||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229180.1;locus_tag=PHA56_RS02005;product=sulfurtransferase complex subunit TusD;protein_id=WP_014227040.1;transl_table=11 NZ_CP116214.1 RefSeq gene 440197 440556 . + . ID=gene-PHA56_RS02010;Name=tusC;gbkey=Gene;gene=tusC;gene_biotype=protein_coding;locus_tag=PHA56_RS02010;old_locus_tag=PHA56_02010 NZ_CP116214.1 Protein Homology CDS 440197 440556 . + 0 ID=cds-WP_119834673.1;Parent=gene-PHA56_RS02010;Dbxref=Genbank:WP_119834673.1;Name=WP_119834673.1;gbkey=CDS;gene=tusC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229179.1;locus_tag=PHA56_RS02010;product=sulfurtransferase complex subunit TusC;protein_id=WP_119834673.1;transl_table=11 NZ_CP116214.1 RefSeq gene 440564 440851 . + . ID=gene-PHA56_RS02015;Name=tusB;gbkey=Gene;gene=tusB;gene_biotype=protein_coding;locus_tag=PHA56_RS02015;old_locus_tag=PHA56_02015 NZ_CP116214.1 Protein Homology CDS 440564 440851 . + 0 ID=cds-WP_025107828.1;Parent=gene-PHA56_RS02015;Dbxref=Genbank:WP_025107828.1;Name=WP_025107828.1;Ontology_term=GO:0002143;gbkey=CDS;gene=tusB;go_process=tRNA wobble position uridine thiolation|0002143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004202221.1;locus_tag=PHA56_RS02015;product=sulfurtransferase complex subunit TusB;protein_id=WP_025107828.1;transl_table=11 NZ_CP116214.1 RefSeq gene 440976 441350 . + . ID=gene-PHA56_RS02020;Name=rpsL;gbkey=Gene;gene=rpsL;gene_biotype=protein_coding;locus_tag=PHA56_RS02020;old_locus_tag=PHA56_02020 NZ_CP116214.1 Protein Homology CDS 440976 441350 . + 0 ID=cds-WP_002920115.1;Parent=gene-PHA56_RS02020;Dbxref=Genbank:WP_002920115.1;Name=WP_002920115.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsL;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005306278.1;locus_tag=PHA56_RS02020;product=30S ribosomal protein S12;protein_id=WP_002920115.1;transl_table=11 NZ_CP116214.1 RefSeq gene 441446 441916 . + . ID=gene-PHA56_RS02025;Name=rpsG;gbkey=Gene;gene=rpsG;gene_biotype=protein_coding;locus_tag=PHA56_RS02025;old_locus_tag=PHA56_02025 NZ_CP116214.1 Protein Homology CDS 441446 441916 . + 0 ID=cds-WP_004106370.1;Parent=gene-PHA56_RS02025;Dbxref=Genbank:WP_004106370.1;Name=WP_004106370.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsG;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742319.1;locus_tag=PHA56_RS02025;product=30S ribosomal protein S7;protein_id=WP_004106370.1;transl_table=11 NZ_CP116214.1 RefSeq gene 442013 444127 . + . ID=gene-PHA56_RS02030;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=PHA56_RS02030;old_locus_tag=PHA56_02030 NZ_CP116214.1 Protein Homology CDS 442013 444127 . + 0 ID=cds-WP_004115957.1;Parent=gene-PHA56_RS02030;Dbxref=Genbank:WP_004115957.1;Name=WP_004115957.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=fusA;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020455498.1;locus_tag=PHA56_RS02030;product=elongation factor G;protein_id=WP_004115957.1;transl_table=11 NZ_CP116214.1 RefSeq gene 444198 445382 . + . ID=gene-PHA56_RS02035;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=PHA56_RS02035;old_locus_tag=PHA56_02035 NZ_CP116214.1 Protein Homology CDS 444198 445382 . + 0 ID=cds-WP_004097636.1;Parent=gene-PHA56_RS02035;Dbxref=Genbank:WP_004097636.1;Name=WP_004097636.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tuf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462349.1;locus_tag=PHA56_RS02035;product=elongation factor Tu;protein_id=WP_004097636.1;transl_table=11 NZ_CP116214.1 RefSeq gene 445556 445750 . + . ID=gene-PHA56_RS02040;Name=bfd;gbkey=Gene;gene=bfd;gene_biotype=protein_coding;locus_tag=PHA56_RS02040;old_locus_tag=PHA56_02040 NZ_CP116214.1 Protein Homology CDS 445556 445750 . + 0 ID=cds-WP_004125913.1;Parent=gene-PHA56_RS02040;Dbxref=Genbank:WP_004125913.1;Name=WP_004125913.1;gbkey=CDS;gene=bfd;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229173.1;locus_tag=PHA56_RS02040;product=bacterioferritin-associated ferredoxin;protein_id=WP_004125913.1;transl_table=11 NZ_CP116214.1 RefSeq gene 445825 446301 . + . ID=gene-PHA56_RS02045;Name=bfr;gbkey=Gene;gene=bfr;gene_biotype=protein_coding;locus_tag=PHA56_RS02045;old_locus_tag=PHA56_02045 NZ_CP116214.1 Protein Homology CDS 445825 446301 . + 0 ID=cds-WP_004125910.1;Parent=gene-PHA56_RS02045;Dbxref=Genbank:WP_004125910.1;Name=WP_004125910.1;Ontology_term=GO:0006880,GO:0004322,GO:0008199;gbkey=CDS;gene=bfr;go_function=ferroxidase activity|0004322||IEA,ferric iron binding|0008199||IEA;go_process=intracellular sequestering of iron ion|0006880||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312216.1;locus_tag=PHA56_RS02045;product=bacterioferritin;protein_id=WP_004125910.1;transl_table=11 NZ_CP116214.1 RefSeq gene 446285 446758 . - . ID=gene-PHA56_RS02050;Name=PHA56_RS02050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS02050;old_locus_tag=PHA56_02050 NZ_CP116214.1 Protein Homology CDS 446285 446758 . - 0 ID=cds-WP_032693888.1;Parent=gene-PHA56_RS02050;Dbxref=Genbank:WP_032693888.1;Name=WP_032693888.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014839668.1;locus_tag=PHA56_RS02050;product=A24 family peptidase;protein_id=WP_032693888.1;transl_table=11 NZ_CP116214.1 RefSeq gene 447139 447450 . + . ID=gene-PHA56_RS02055;Name=rpsJ;gbkey=Gene;gene=rpsJ;gene_biotype=protein_coding;locus_tag=PHA56_RS02055;old_locus_tag=PHA56_02055 NZ_CP116214.1 Protein Homology CDS 447139 447450 . + 0 ID=cds-WP_001181005.1;Parent=gene-PHA56_RS02055;Dbxref=Genbank:WP_001181005.1;Name=WP_001181005.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsJ;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014268624.1;locus_tag=PHA56_RS02055;product=30S ribosomal protein S10;protein_id=WP_001181005.1;transl_table=11 NZ_CP116214.1 RefSeq gene 447483 448112 . + . ID=gene-PHA56_RS02060;Name=rplC;gbkey=Gene;gene=rplC;gene_biotype=protein_coding;locus_tag=PHA56_RS02060;old_locus_tag=PHA56_02060 NZ_CP116214.1 Protein Homology CDS 447483 448112 . + 0 ID=cds-WP_004106354.1;Parent=gene-PHA56_RS02060;Dbxref=Genbank:WP_004106354.1;Name=WP_004106354.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000579825.1;locus_tag=PHA56_RS02060;product=50S ribosomal protein L3;protein_id=WP_004106354.1;transl_table=11 NZ_CP116214.1 RefSeq gene 448123 448728 . + . ID=gene-PHA56_RS02065;Name=rplD;gbkey=Gene;gene=rplD;gene_biotype=protein_coding;locus_tag=PHA56_RS02065;old_locus_tag=PHA56_02065 NZ_CP116214.1 Protein Homology CDS 448123 448728 . + 0 ID=cds-WP_003031119.1;Parent=gene-PHA56_RS02065;Dbxref=Genbank:WP_003031119.1;Name=WP_003031119.1;Ontology_term=GO:0006412,GO:0003735,GO:0022625;gbkey=CDS;gene=rplD;go_component=cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010304939.1;locus_tag=PHA56_RS02065;product=50S ribosomal protein L4;protein_id=WP_003031119.1;transl_table=11 NZ_CP116214.1 RefSeq gene 448725 449027 . + . ID=gene-PHA56_RS02070;Name=rplW;gbkey=Gene;gene=rplW;gene_biotype=protein_coding;locus_tag=PHA56_RS02070;old_locus_tag=PHA56_02070 NZ_CP116214.1 Protein Homology CDS 448725 449027 . + 0 ID=cds-WP_000617546.1;Parent=gene-PHA56_RS02070;Dbxref=Genbank:WP_000617546.1;Name=WP_000617546.1;gbkey=CDS;gene=rplW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007891652.1;locus_tag=PHA56_RS02070;product=50S ribosomal protein L23;protein_id=WP_000617546.1;transl_table=11 NZ_CP116214.1 RefSeq gene 449045 449866 . + . ID=gene-PHA56_RS02075;Name=rplB;gbkey=Gene;gene=rplB;gene_biotype=protein_coding;locus_tag=PHA56_RS02075;old_locus_tag=PHA56_02075 NZ_CP116214.1 Protein Homology CDS 449045 449866 . + 0 ID=cds-WP_000301869.1;Parent=gene-PHA56_RS02075;Dbxref=Genbank:WP_000301869.1;Name=WP_000301869.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplB;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001738551.1;locus_tag=PHA56_RS02075;product=50S ribosomal protein L2;protein_id=WP_000301869.1;transl_table=11 NZ_CP116214.1 RefSeq gene 449883 450161 . + . ID=gene-PHA56_RS02080;Name=rpsS;gbkey=Gene;gene=rpsS;gene_biotype=protein_coding;locus_tag=PHA56_RS02080;old_locus_tag=PHA56_02080 NZ_CP116214.1 Protein Homology CDS 449883 450161 . + 0 ID=cds-WP_001138115.1;Parent=gene-PHA56_RS02080;Dbxref=Genbank:WP_001138115.1;Name=WP_001138115.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsS;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011148791.1;locus_tag=PHA56_RS02080;product=30S ribosomal protein S19;protein_id=WP_001138115.1;transl_table=11 NZ_CP116214.1 RefSeq gene 450176 450508 . + . ID=gene-PHA56_RS02085;Name=rplV;gbkey=Gene;gene=rplV;gene_biotype=protein_coding;locus_tag=PHA56_RS02085;old_locus_tag=PHA56_02085 NZ_CP116214.1 Protein Homology CDS 450176 450508 . + 0 ID=cds-WP_002919773.1;Parent=gene-PHA56_RS02085;Dbxref=Genbank:WP_002919773.1;Name=WP_002919773.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplV;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000447526.1;locus_tag=PHA56_RS02085;product=50S ribosomal protein L22;protein_id=WP_002919773.1;transl_table=11 NZ_CP116214.1 RefSeq gene 450526 451224 . + . ID=gene-PHA56_RS02090;Name=rpsC;gbkey=Gene;gene=rpsC;gene_biotype=protein_coding;locus_tag=PHA56_RS02090;old_locus_tag=PHA56_02090 NZ_CP116214.1 Protein Homology CDS 450526 451224 . + 0 ID=cds-WP_004106350.1;Parent=gene-PHA56_RS02090;Dbxref=Genbank:WP_004106350.1;Name=WP_004106350.1;Ontology_term=GO:0006412,GO:0003735,GO:0000312,GO:0022627;gbkey=CDS;gene=rpsC;go_component=plastid small ribosomal subunit|0000312||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742302.1;locus_tag=PHA56_RS02090;product=30S ribosomal protein S3;protein_id=WP_004106350.1;transl_table=11 NZ_CP116214.1 RefSeq gene 451237 451647 . + . ID=gene-PHA56_RS02095;Name=rplP;gbkey=Gene;gene=rplP;gene_biotype=protein_coding;locus_tag=PHA56_RS02095;old_locus_tag=PHA56_02095 NZ_CP116214.1 Protein Homology CDS 451237 451647 . + 0 ID=cds-WP_002919759.1;Parent=gene-PHA56_RS02095;Dbxref=Genbank:WP_002919759.1;Name=WP_002919759.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplP;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017805229.1;locus_tag=PHA56_RS02095;product=50S ribosomal protein L16;protein_id=WP_002919759.1;transl_table=11 NZ_CP116214.1 RefSeq gene 451647 451838 . + . ID=gene-PHA56_RS02100;Name=rpmC;gbkey=Gene;gene=rpmC;gene_biotype=protein_coding;locus_tag=PHA56_RS02100;old_locus_tag=PHA56_02100 NZ_CP116214.1 Protein Homology CDS 451647 451838 . + 0 ID=cds-WP_002919754.1;Parent=gene-PHA56_RS02100;Dbxref=Genbank:WP_002919754.1;Name=WP_002919754.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmC;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000644743.1;locus_tag=PHA56_RS02100;product=50S ribosomal protein L29;protein_id=WP_002919754.1;transl_table=11 NZ_CP116214.1 RefSeq gene 451838 452092 . + . ID=gene-PHA56_RS02105;Name=rpsQ;gbkey=Gene;gene=rpsQ;gene_biotype=protein_coding;locus_tag=PHA56_RS02105;old_locus_tag=PHA56_02105 NZ_CP116214.1 Protein Homology CDS 451838 452092 . + 0 ID=cds-WP_004106347.1;Parent=gene-PHA56_RS02105;Dbxref=Genbank:WP_004106347.1;Name=WP_004106347.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006817275.1;locus_tag=PHA56_RS02105;product=30S ribosomal protein S17;protein_id=WP_004106347.1;transl_table=11 NZ_CP116214.1 RefSeq gene 452258 452629 . + . ID=gene-PHA56_RS02110;Name=rplN;gbkey=Gene;gene=rplN;gene_biotype=protein_coding;locus_tag=PHA56_RS02110;old_locus_tag=PHA56_02110 NZ_CP116214.1 Protein Homology CDS 452258 452629 . + 0 ID=cds-WP_000613954.1;Parent=gene-PHA56_RS02110;Dbxref=Genbank:WP_000613954.1;Name=WP_000613954.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplN;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012728338.1;locus_tag=PHA56_RS02110;product=50S ribosomal protein L14;protein_id=WP_000613954.1;transl_table=11 NZ_CP116214.1 RefSeq gene 452640 452954 . + . ID=gene-PHA56_RS02115;Name=rplX;gbkey=Gene;gene=rplX;gene_biotype=protein_coding;locus_tag=PHA56_RS02115;old_locus_tag=PHA56_02115 NZ_CP116214.1 Protein Homology CDS 452640 452954 . + 0 ID=cds-WP_004106345.1;Parent=gene-PHA56_RS02115;Dbxref=Genbank:WP_004106345.1;Name=WP_004106345.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplX;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000729185.1;locus_tag=PHA56_RS02115;product=50S ribosomal protein L24;protein_id=WP_004106345.1;transl_table=11 NZ_CP116214.1 RefSeq gene 452969 453508 . + . ID=gene-PHA56_RS02120;Name=rplE;gbkey=Gene;gene=rplE;gene_biotype=protein_coding;locus_tag=PHA56_RS02120;old_locus_tag=PHA56_02120 NZ_CP116214.1 Protein Homology CDS 452969 453508 . + 0 ID=cds-WP_001096202.1;Parent=gene-PHA56_RS02120;Dbxref=Genbank:WP_001096202.1;Name=WP_001096202.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001096198.1;locus_tag=PHA56_RS02120;product=50S ribosomal protein L5;protein_id=WP_001096202.1;transl_table=11 NZ_CP116214.1 RefSeq gene 453523 453828 . + . ID=gene-PHA56_RS02125;Name=rpsN;gbkey=Gene;gene=rpsN;gene_biotype=protein_coding;locus_tag=PHA56_RS02125;old_locus_tag=PHA56_02125 NZ_CP116214.1 Protein Homology CDS 453523 453828 . + 0 ID=cds-WP_002919667.1;Parent=gene-PHA56_RS02125;Dbxref=Genbank:WP_002919667.1;Name=WP_002919667.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsN;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005599304.1;locus_tag=PHA56_RS02125;product=30S ribosomal protein S14;protein_id=WP_002919667.1;transl_table=11 NZ_CP116214.1 RefSeq gene 453862 454254 . + . ID=gene-PHA56_RS02130;Name=rpsH;gbkey=Gene;gene=rpsH;gene_biotype=protein_coding;locus_tag=PHA56_RS02130;old_locus_tag=PHA56_02130 NZ_CP116214.1 Protein Homology CDS 453862 454254 . + 0 ID=cds-WP_004106343.1;Parent=gene-PHA56_RS02130;Dbxref=Genbank:WP_004106343.1;Name=WP_004106343.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsH;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011148781.1;locus_tag=PHA56_RS02130;product=30S ribosomal protein S8;protein_id=WP_004106343.1;transl_table=11 NZ_CP116214.1 RefSeq gene 454267 454800 . + . ID=gene-PHA56_RS02135;Name=rplF;gbkey=Gene;gene=rplF;gene_biotype=protein_coding;locus_tag=PHA56_RS02135;old_locus_tag=PHA56_02135 NZ_CP116214.1 Protein Homology CDS 454267 454800 . + 0 ID=cds-WP_004106341.1;Parent=gene-PHA56_RS02135;Dbxref=Genbank:WP_004106341.1;Name=WP_004106341.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0022625;gbkey=CDS;gene=rplF;go_component=cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003031129.1;locus_tag=PHA56_RS02135;product=50S ribosomal protein L6;protein_id=WP_004106341.1;transl_table=11 NZ_CP116214.1 RefSeq gene 454810 455163 . + . ID=gene-PHA56_RS02140;Name=rplR;gbkey=Gene;gene=rplR;gene_biotype=protein_coding;locus_tag=PHA56_RS02140;old_locus_tag=PHA56_02140 NZ_CP116214.1 Protein Homology CDS 454810 455163 . + 0 ID=cds-WP_000358960.1;Parent=gene-PHA56_RS02140;Dbxref=Genbank:WP_000358960.1;Name=WP_000358960.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplR;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005970258.1;locus_tag=PHA56_RS02140;product=50S ribosomal protein L18;protein_id=WP_000358960.1;transl_table=11 NZ_CP116214.1 RefSeq gene 455178 455681 . + . ID=gene-PHA56_RS02145;Name=rpsE;gbkey=Gene;gene=rpsE;gene_biotype=protein_coding;locus_tag=PHA56_RS02145;old_locus_tag=PHA56_02145 NZ_CP116214.1 Protein Homology CDS 455178 455681 . + 0 ID=cds-WP_004106339.1;Parent=gene-PHA56_RS02145;Dbxref=Genbank:WP_004106339.1;Name=WP_004106339.1;Ontology_term=GO:0006412,GO:0003735,GO:0000312,GO:0022627;gbkey=CDS;gene=rpsE;go_component=plastid small ribosomal subunit|0000312||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004106339.1;locus_tag=PHA56_RS02145;product=30S ribosomal protein S5;protein_id=WP_004106339.1;transl_table=11 NZ_CP116214.1 RefSeq gene 455685 455864 . + . ID=gene-PHA56_RS02150;Name=rpmD;gbkey=Gene;gene=rpmD;gene_biotype=protein_coding;locus_tag=PHA56_RS02150;old_locus_tag=PHA56_02150 NZ_CP116214.1 Protein Homology CDS 455685 455864 . + 0 ID=cds-WP_001140434.1;Parent=gene-PHA56_RS02150;Dbxref=Genbank:WP_001140434.1;Name=WP_001140434.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmD;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012147215.1;locus_tag=PHA56_RS02150;product=50S ribosomal protein L30;protein_id=WP_001140434.1;transl_table=11 NZ_CP116214.1 RefSeq gene 455868 456302 . + . ID=gene-PHA56_RS02155;Name=rplO;gbkey=Gene;gene=rplO;gene_biotype=protein_coding;locus_tag=PHA56_RS02155;old_locus_tag=PHA56_02155 NZ_CP116214.1 Protein Homology CDS 455868 456302 . + 0 ID=cds-WP_004106336.1;Parent=gene-PHA56_RS02155;Dbxref=Genbank:WP_004106336.1;Name=WP_004106336.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplO;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011095501.1;locus_tag=PHA56_RS02155;product=50S ribosomal protein L15;protein_id=WP_004106336.1;transl_table=11 NZ_CP116214.1 RefSeq gene 456310 457641 . + . ID=gene-PHA56_RS02160;Name=secY;gbkey=Gene;gene=secY;gene_biotype=protein_coding;locus_tag=PHA56_RS02160;old_locus_tag=PHA56_02160 NZ_CP116214.1 Protein Homology CDS 456310 457641 . + 0 ID=cds-WP_004106334.1;Parent=gene-PHA56_RS02160;Dbxref=Genbank:WP_004106334.1;Name=WP_004106334.1;Ontology_term=GO:0043952,GO:0015450,GO:0005886;gbkey=CDS;gene=secY;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004868351.1;locus_tag=PHA56_RS02160;product=preprotein translocase subunit SecY;protein_id=WP_004106334.1;transl_table=11 NZ_CP116214.1 RefSeq gene 457673 457789 . + . ID=gene-PHA56_RS02165;Name=rpmJ;gbkey=Gene;gene=rpmJ;gene_biotype=protein_coding;locus_tag=PHA56_RS02165;old_locus_tag=PHA56_02165 NZ_CP116214.1 Protein Homology CDS 457673 457789 . + 0 ID=cds-WP_000868187.1;Parent=gene-PHA56_RS02165;Dbxref=Genbank:WP_000868187.1;Name=WP_000868187.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmJ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020322760.1;locus_tag=PHA56_RS02165;product=50S ribosomal protein L36;protein_id=WP_000868187.1;transl_table=11 NZ_CP116214.1 RefSeq gene 457936 458292 . + . ID=gene-PHA56_RS02170;Name=rpsM;gbkey=Gene;gene=rpsM;gene_biotype=protein_coding;locus_tag=PHA56_RS02170;old_locus_tag=PHA56_02170 NZ_CP116214.1 Protein Homology CDS 457936 458292 . + 0 ID=cds-WP_004106333.1;Parent=gene-PHA56_RS02170;Dbxref=Genbank:WP_004106333.1;Name=WP_004106333.1;Ontology_term=GO:0006412,GO:0003735,GO:0022627;gbkey=CDS;gene=rpsM;go_component=cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019935869.1;locus_tag=PHA56_RS02170;product=30S ribosomal protein S13;protein_id=WP_004106333.1;transl_table=11 NZ_CP116214.1 RefSeq gene 458309 458698 . + . ID=gene-PHA56_RS02175;Name=rpsK;gbkey=Gene;gene=rpsK;gene_biotype=protein_coding;locus_tag=PHA56_RS02175;old_locus_tag=PHA56_02175 NZ_CP116214.1 Protein Homology CDS 458309 458698 . + 0 ID=cds-WP_004138423.1;Parent=gene-PHA56_RS02175;Dbxref=Genbank:WP_004138423.1;Name=WP_004138423.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001029758.1;locus_tag=PHA56_RS02175;product=30S ribosomal protein S11;protein_id=WP_004138423.1;transl_table=11 NZ_CP116214.1 RefSeq gene 458732 459352 . + . ID=gene-PHA56_RS02180;Name=rpsD;gbkey=Gene;gene=rpsD;gene_biotype=protein_coding;locus_tag=PHA56_RS02180;old_locus_tag=PHA56_02180 NZ_CP116214.1 Protein Homology CDS 458732 459352 . + 0 ID=cds-WP_004125897.1;Parent=gene-PHA56_RS02180;Dbxref=Genbank:WP_004125897.1;Name=WP_004125897.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0015935;gbkey=CDS;gene=rpsD;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004410410.1;locus_tag=PHA56_RS02180;product=30S ribosomal protein S4;protein_id=WP_004125897.1;transl_table=11 NZ_CP116214.1 RefSeq gene 459378 460367 . + . ID=gene-PHA56_RS02185;Name=rpoA;gbkey=Gene;gene=rpoA;gene_biotype=protein_coding;locus_tag=PHA56_RS02185;old_locus_tag=PHA56_02185 NZ_CP116214.1 Protein Homology CDS 459378 460367 . + 0 ID=cds-WP_002919219.1;Parent=gene-PHA56_RS02185;Dbxref=Genbank:WP_002919219.1;Name=WP_002919219.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899,GO:0046983;gbkey=CDS;gene=rpoA;go_function=DNA binding|0003677||IEA,DNA-directed 5'-3' RNA polymerase activity|0003899||IEA,protein dimerization activity|0046983||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005970247.1;locus_tag=PHA56_RS02185;product=DNA-directed RNA polymerase subunit alpha;protein_id=WP_002919219.1;transl_table=11 NZ_CP116214.1 RefSeq gene 460408 460794 . + . ID=gene-PHA56_RS02190;Name=rplQ;gbkey=Gene;gene=rplQ;gene_biotype=protein_coding;locus_tag=PHA56_RS02190;old_locus_tag=PHA56_02190 NZ_CP116214.1 Protein Homology CDS 460408 460794 . + 0 ID=cds-WP_271292954.1;Parent=gene-PHA56_RS02190;Dbxref=Genbank:WP_271292954.1;Name=WP_271292954.1;Ontology_term=GO:0006412,GO:0003735,GO:0005762,GO:0022625;gbkey=CDS;gene=rplQ;go_component=mitochondrial large ribosomal subunit|0005762||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312186.1;locus_tag=PHA56_RS02190;product=50S ribosomal protein L17;protein_id=WP_271292954.1;transl_table=11 NZ_CP116214.1 RefSeq gene 460902 461270 . + . ID=gene-PHA56_RS02195;Name=PHA56_RS02195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS02195;old_locus_tag=PHA56_02195 NZ_CP116214.1 Protein Homology CDS 460902 461270 . + 0 ID=cds-WP_038423763.1;Parent=gene-PHA56_RS02195;Dbxref=Genbank:WP_038423763.1;Name=WP_038423763.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229142.1;locus_tag=PHA56_RS02195;product=DUF1992 domain-containing protein;protein_id=WP_038423763.1;transl_table=11 NZ_CP116214.1 RefSeq gene 461273 461698 . + . ID=gene-PHA56_RS02200;Name=zntR;gbkey=Gene;gene=zntR;gene_biotype=protein_coding;locus_tag=PHA56_RS02200;old_locus_tag=PHA56_02200 NZ_CP116214.1 Protein Homology CDS 461273 461698 . + 0 ID=cds-WP_014227035.1;Parent=gene-PHA56_RS02200;Dbxref=Genbank:WP_014227035.1;Name=WP_014227035.1;Ontology_term=GO:0006355,GO:0003677,GO:0008270;gbkey=CDS;gene=zntR;go_function=DNA binding|0003677||IEA,zinc ion binding|0008270||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229141.1;locus_tag=PHA56_RS02200;product=Zn(2+)-responsive transcriptional regulator;protein_id=WP_014227035.1;transl_table=11 NZ_CP116214.1 RefSeq gene 461757 462017 . + . ID=gene-PHA56_RS02205;Name=PHA56_RS02205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS02205;old_locus_tag=PHA56_02205 NZ_CP116214.1 Protein Homology CDS 461757 462017 . + 0 ID=cds-WP_071846056.1;Parent=gene-PHA56_RS02205;Dbxref=Genbank:WP_071846056.1;Name=WP_071846056.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004138426.1;locus_tag=PHA56_RS02205;product=alternative ribosome-rescue factor A;protein_id=WP_071846056.1;transl_table=11 NZ_CP116214.1 RefSeq gene 461971 462384 . - . ID=gene-PHA56_RS02210;Name=mscL;gbkey=Gene;gene=mscL;gene_biotype=protein_coding;locus_tag=PHA56_RS02210;old_locus_tag=PHA56_02210 NZ_CP116214.1 Protein Homology CDS 461971 462384 . - 0 ID=cds-WP_004106310.1;Parent=gene-PHA56_RS02210;Dbxref=Genbank:WP_004106310.1;Name=WP_004106310.1;gbkey=CDS;gene=mscL;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229140.1;locus_tag=PHA56_RS02210;product=large-conductance mechanosensitive channel protein MscL;protein_id=WP_004106310.1;transl_table=11 NZ_CP116214.1 RefSeq gene 462525 463901 . - . ID=gene-PHA56_RS02215;Name=trkA;gbkey=Gene;gene=trkA;gene_biotype=protein_coding;locus_tag=PHA56_RS02215;old_locus_tag=PHA56_02215 NZ_CP116214.1 Protein Homology CDS 462525 463901 . - 0 ID=cds-WP_004125888.1;Parent=gene-PHA56_RS02215;Dbxref=Genbank:WP_004125888.1;Name=WP_004125888.1;Ontology_term=GO:0006813,GO:0015079,GO:0016020;gbkey=CDS;gene=trkA;go_component=membrane|0016020||IEA;go_function=potassium ion transmembrane transporter activity|0015079||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004125888.1;locus_tag=PHA56_RS02215;product=Trk system potassium transporter TrkA;protein_id=WP_004125888.1;transl_table=11 NZ_CP116214.1 RefSeq gene 463923 465209 . - . ID=gene-PHA56_RS02220;Name=rsmB;gbkey=Gene;gene=rsmB;gene_biotype=protein_coding;locus_tag=PHA56_RS02220;old_locus_tag=PHA56_02220 NZ_CP116214.1 Protein Homology CDS 463923 465209 . - 0 ID=cds-WP_038423761.1;Parent=gene-PHA56_RS02220;Dbxref=Genbank:WP_038423761.1;Name=WP_038423761.1;Ontology_term=GO:0001510,GO:0006355,GO:0006364,GO:0003723,GO:0008649;gbkey=CDS;gene=rsmB;go_function=RNA binding|0003723||IEA,rRNA methyltransferase activity|0008649||IEA;go_process=RNA methylation|0001510||IEA,regulation of DNA-templated transcription|0006355||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417747.1;locus_tag=PHA56_RS02220;product=16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB;protein_id=WP_038423761.1;transl_table=11 NZ_CP116214.1 RefSeq gene 465261 466208 . - . ID=gene-PHA56_RS02225;Name=fmt;gbkey=Gene;gene=fmt;gene_biotype=protein_coding;locus_tag=PHA56_RS02225;old_locus_tag=PHA56_02225 NZ_CP116214.1 Protein Homology CDS 465261 466208 . - 0 ID=cds-WP_038423759.1;Parent=gene-PHA56_RS02225;Dbxref=Genbank:WP_038423759.1;Name=WP_038423759.1;Ontology_term=GO:0006431,GO:0004479,GO:0005737;gbkey=CDS;gene=fmt;go_component=cytoplasm|0005737||IEA;go_function=methionyl-tRNA formyltransferase activity|0004479||IEA;go_process=methionyl-tRNA aminoacylation|0006431||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312180.1;locus_tag=PHA56_RS02225;product=methionyl-tRNA formyltransferase;protein_id=WP_038423759.1;transl_table=11 NZ_CP116214.1 RefSeq gene 466223 466732 . - . ID=gene-PHA56_RS02230;Name=def;gbkey=Gene;gene=def;gene_biotype=protein_coding;locus_tag=PHA56_RS02230;old_locus_tag=PHA56_02230 NZ_CP116214.1 Protein Homology CDS 466223 466732 . - 0 ID=cds-WP_004854751.1;Parent=gene-PHA56_RS02230;Dbxref=Genbank:WP_004854751.1;Name=WP_004854751.1;Ontology_term=GO:0036211,GO:0042586;gbkey=CDS;gene=def;go_function=peptide deformylase activity|0042586||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462310.1;locus_tag=PHA56_RS02230;product=peptide deformylase;protein_id=WP_004854751.1;transl_table=11 NZ_CP116214.1 RefSeq gene 466862 467986 . + . ID=gene-PHA56_RS02235;Name=dprA;gbkey=Gene;gene=dprA;gene_biotype=protein_coding;locus_tag=PHA56_RS02235;old_locus_tag=PHA56_02235 NZ_CP116214.1 Protein Homology CDS 466862 467986 . + 0 ID=cds-WP_014227031.1;Parent=gene-PHA56_RS02235;Dbxref=Genbank:WP_014227031.1;Name=WP_014227031.1;Ontology_term=GO:0009294;gbkey=CDS;gene=dprA;go_process=DNA-mediated transformation|0009294||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009484602.1;locus_tag=PHA56_RS02235;product=DNA-protecting protein DprA;protein_id=WP_014227031.1;transl_table=11 NZ_CP116214.1 RefSeq gene 467958 468431 . + . ID=gene-PHA56_RS02240;Name=smg;gbkey=Gene;gene=smg;gene_biotype=protein_coding;locus_tag=PHA56_RS02240;old_locus_tag=PHA56_02240 NZ_CP116214.1 Protein Homology CDS 467958 468431 . + 0 ID=cds-WP_014227030.1;Parent=gene-PHA56_RS02240;Dbxref=Genbank:WP_014227030.1;Name=WP_014227030.1;gbkey=CDS;gene=smg;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134083.1;locus_tag=PHA56_RS02240;product=DUF494 family protein Smg;protein_id=WP_014227030.1;transl_table=11 NZ_CP116214.1 RefSeq gene 468459 469001 . + . ID=gene-PHA56_RS02245;Name=PHA56_RS02245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS02245;old_locus_tag=PHA56_02245 NZ_CP116214.1 Protein Homology CDS 468459 469001 . + 0 ID=cds-WP_014227029.1;Parent=gene-PHA56_RS02245;Dbxref=Genbank:WP_014227029.1;Name=WP_014227029.1;Ontology_term=GO:0006265,GO:0003677,GO:0003916,GO:0005694;gbkey=CDS;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229133.1;locus_tag=PHA56_RS02245;product=type I DNA topoisomerase;protein_id=WP_014227029.1;transl_table=11 NZ_CP116214.1 RefSeq gene 469006 469578 . + . ID=gene-PHA56_RS02250;Name=tsaC;gbkey=Gene;gene=tsaC;gene_biotype=protein_coding;locus_tag=PHA56_RS02250;old_locus_tag=PHA56_02250 NZ_CP116214.1 Protein Homology CDS 469006 469578 . + 0 ID=cds-WP_038423757.1;Parent=gene-PHA56_RS02250;Dbxref=Genbank:WP_038423757.1;Name=WP_038423757.1;Ontology_term=GO:0002949,GO:0003725,GO:0005524;gbkey=CDS;gene=tsaC;go_function=double-stranded RNA binding|0003725||IEA,ATP binding|0005524||IEA;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229132.1;locus_tag=PHA56_RS02250;product=L-threonylcarbamoyladenylate synthase type 1 TsaC;protein_id=WP_038423757.1;transl_table=11 NZ_CP116214.1 RefSeq gene 469582 470400 . + . ID=gene-PHA56_RS02255;Name=aroE;gbkey=Gene;gene=aroE;gene_biotype=protein_coding;locus_tag=PHA56_RS02255;old_locus_tag=PHA56_02255 NZ_CP116214.1 Protein Homology CDS 469582 470400 . + 0 ID=cds-WP_038423755.1;Parent=gene-PHA56_RS02255;Dbxref=Genbank:WP_038423755.1;Name=WP_038423755.1;Ontology_term=GO:0019632,GO:0004764;gbkey=CDS;gene=aroE;go_function=shikimate 3-dehydrogenase (NADP+) activity|0004764||IEA;go_process=shikimate metabolic process|0019632||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229131.1;locus_tag=PHA56_RS02255;product=shikimate dehydrogenase;protein_id=WP_038423755.1;transl_table=11 NZ_CP116214.1 RefSeq gene 470397 470654 . + . ID=gene-PHA56_RS02260;Name=PHA56_RS02260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS02260;old_locus_tag=PHA56_02260 NZ_CP116214.1 Protein Homology CDS 470397 470654 . + 0 ID=cds-WP_014227027.1;Parent=gene-PHA56_RS02260;Dbxref=Genbank:WP_014227027.1;Name=WP_014227027.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002919125.1;locus_tag=PHA56_RS02260;product=DUF1488 domain-containing protein;protein_id=WP_014227027.1;transl_table=11 NZ_CP116214.1 RefSeq gene 470630 471184 . - . ID=gene-PHA56_RS02265;Name=PHA56_RS02265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS02265;old_locus_tag=PHA56_02265 NZ_CP116214.1 Protein Homology CDS 470630 471184 . - 0 ID=cds-WP_038423753.1;Parent=gene-PHA56_RS02265;Dbxref=Genbank:WP_038423753.1;Name=WP_038423753.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134094.1;locus_tag=PHA56_RS02265;product=gamma carbonic anhydrase family protein;protein_id=WP_038423753.1;transl_table=11 NZ_CP116214.1 RefSeq gene 471657 473196 . + . ID=gene-PHA56_RS02270;Name=PHA56_RS02270;gbkey=Gene;gene_biotype=rRNA;locus_tag=PHA56_RS02270;old_locus_tag=PHA56_02270 NZ_CP116214.1 cmsearch rRNA 471657 473196 . + . ID=rna-PHA56_RS02270;Parent=gene-PHA56_RS02270;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA56_RS02270;product=16S ribosomal RNA NZ_CP116214.1 cmsearch exon 471657 473196 . + . ID=exon-PHA56_RS02270-1;Parent=rna-PHA56_RS02270;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA56_RS02270;product=16S ribosomal RNA NZ_CP116214.1 RefSeq gene 473282 473357 . + . ID=gene-PHA56_RS02275;Name=PHA56_RS02275;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA56_RS02275;old_locus_tag=PHA56_02275 NZ_CP116214.1 tRNAscan-SE tRNA 473282 473357 . + . ID=rna-PHA56_RS02275;Parent=gene-PHA56_RS02275;anticodon=(pos:473316..473318);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS02275;product=tRNA-Glu NZ_CP116214.1 tRNAscan-SE exon 473282 473357 . + . ID=exon-PHA56_RS02275-1;Parent=rna-PHA56_RS02275;anticodon=(pos:473316..473318);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS02275;product=tRNA-Glu NZ_CP116214.1 RefSeq gene 473548 476453 . + . ID=gene-PHA56_RS02280;Name=PHA56_RS02280;gbkey=Gene;gene_biotype=rRNA;locus_tag=PHA56_RS02280;old_locus_tag=PHA56_02280 NZ_CP116214.1 cmsearch rRNA 473548 476453 . + . ID=rna-PHA56_RS02280;Parent=gene-PHA56_RS02280;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA56_RS02280;product=23S ribosomal RNA NZ_CP116214.1 cmsearch exon 473548 476453 . + . ID=exon-PHA56_RS02280-1;Parent=rna-PHA56_RS02280;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA56_RS02280;product=23S ribosomal RNA NZ_CP116214.1 RefSeq gene 476654 476769 . + . ID=gene-PHA56_RS02285;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=PHA56_RS02285;old_locus_tag=PHA56_02285 NZ_CP116214.1 cmsearch rRNA 476654 476769 . + . ID=rna-PHA56_RS02285;Parent=gene-PHA56_RS02285;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA56_RS02285;product=5S ribosomal RNA NZ_CP116214.1 cmsearch exon 476654 476769 . + . ID=exon-PHA56_RS02285-1;Parent=rna-PHA56_RS02285;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA56_RS02285;product=5S ribosomal RNA NZ_CP116214.1 RefSeq gene 476784 476859 . + . ID=gene-PHA56_RS02290;Name=PHA56_RS02290;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA56_RS02290;old_locus_tag=PHA56_02290 NZ_CP116214.1 tRNAscan-SE tRNA 476784 476859 . + . ID=rna-PHA56_RS02290;Parent=gene-PHA56_RS02290;anticodon=(pos:476817..476819);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS02290;product=tRNA-Thr NZ_CP116214.1 tRNAscan-SE exon 476784 476859 . + . ID=exon-PHA56_RS02290-1;Parent=rna-PHA56_RS02290;anticodon=(pos:476817..476819);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS02290;product=tRNA-Thr NZ_CP116214.1 RefSeq gene 476898 477013 . + . ID=gene-PHA56_RS02295;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=PHA56_RS02295;old_locus_tag=PHA56_02295 NZ_CP116214.1 cmsearch rRNA 476898 477013 . + . ID=rna-PHA56_RS02295;Parent=gene-PHA56_RS02295;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA56_RS02295;product=5S ribosomal RNA NZ_CP116214.1 cmsearch exon 476898 477013 . + . ID=exon-PHA56_RS02295-1;Parent=rna-PHA56_RS02295;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA56_RS02295;product=5S ribosomal RNA NZ_CP116214.1 RefSeq gene 477250 477471 . - . ID=gene-PHA56_RS02300;Name=PHA56_RS02300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS02300;old_locus_tag=PHA56_02300 NZ_CP116214.1 Protein Homology CDS 477250 477471 . - 0 ID=cds-WP_004854727.1;Parent=gene-PHA56_RS02300;Dbxref=Genbank:WP_004854727.1;Name=WP_004854727.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229128.1;locus_tag=PHA56_RS02300;product=hypothetical protein;protein_id=WP_004854727.1;transl_table=11 NZ_CP116214.1 RefSeq gene 477740 480850 . - . ID=gene-PHA56_RS02305;Name=PHA56_RS02305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS02305;old_locus_tag=PHA56_02305 NZ_CP116214.1 Protein Homology CDS 477740 480850 . - 0 ID=cds-WP_014227025.1;Parent=gene-PHA56_RS02305;Dbxref=Genbank:WP_014227025.1;Name=WP_014227025.1;Ontology_term=GO:0006810,GO:0015562,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229127.1;locus_tag=PHA56_RS02305;product=efflux RND transporter permease subunit;protein_id=WP_014227025.1;transl_table=11 NZ_CP116214.1 RefSeq gene 480864 482003 . - . ID=gene-PHA56_RS02310;Name=PHA56_RS02310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS02310;old_locus_tag=PHA56_02310 NZ_CP116214.1 Protein Homology CDS 480864 482003 . - 0 ID=cds-WP_014839656.1;Parent=gene-PHA56_RS02310;Dbxref=Genbank:WP_014839656.1;Name=WP_014839656.1;Ontology_term=GO:0006810,GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004854721.1;locus_tag=PHA56_RS02310;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_014839656.1;transl_table=11 NZ_CP116214.1 RefSeq gene 482382 483023 . + . ID=gene-PHA56_RS02315;Name=envR;gbkey=Gene;gene=envR;gene_biotype=protein_coding;locus_tag=PHA56_RS02315;old_locus_tag=PHA56_02315 NZ_CP116214.1 Protein Homology CDS 482382 483023 . + 0 ID=cds-WP_004854718.1;Parent=gene-PHA56_RS02315;Dbxref=Genbank:WP_004854718.1;Name=WP_004854718.1;gbkey=CDS;gene=envR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004106278.1;locus_tag=PHA56_RS02315;product=acrEF/envCD operon transcriptional regulator;protein_id=WP_004854718.1;transl_table=11 NZ_CP116214.1 RefSeq gene 483097 483393 . - . ID=gene-PHA56_RS02320;Name=fis;gbkey=Gene;gene=fis;gene_biotype=protein_coding;locus_tag=PHA56_RS02320;old_locus_tag=PHA56_02320 NZ_CP116214.1 Protein Homology CDS 483097 483393 . - 0 ID=cds-WP_000462905.1;Parent=gene-PHA56_RS02320;Dbxref=Genbank:WP_000462905.1;Name=WP_000462905.1;gbkey=CDS;gene=fis;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001465625.1;locus_tag=PHA56_RS02320;product=DNA-binding transcriptional regulator Fis;protein_id=WP_000462905.1;transl_table=11 NZ_CP116214.1 RefSeq pseudogene 483375 484383 . - . ID=gene-PHA56_RS02325;Name=dusB;gbkey=Gene;gene=dusB;gene_biotype=pseudogene;locus_tag=PHA56_RS02325;old_locus_tag=PHA56_02325;pseudo=true NZ_CP116214.1 Protein Homology CDS 483375 484383 . - 0 ID=cds-PHA56_RS02325;Parent=gene-PHA56_RS02325;Note=frameshifted;Ontology_term=GO:0008033,GO:0003824,GO:0016491,GO:0017150,GO:0050660;gbkey=CDS;gene=dusB;go_function=catalytic activity|0003824||IEA,oxidoreductase activity|0016491||IEA,tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004936856.1;locus_tag=PHA56_RS02325;product=tRNA dihydrouridine synthase DusB;pseudo=true;transl_table=11 NZ_CP116214.1 RefSeq gene 484712 485452 . - . ID=gene-PHA56_RS02330;Name=PHA56_RS02330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS02330;old_locus_tag=PHA56_02330 NZ_CP116214.1 Protein Homology CDS 484712 485452 . - 0 ID=cds-WP_014227022.1;Parent=gene-PHA56_RS02330;Dbxref=Genbank:WP_014227022.1;Name=WP_014227022.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004115924.1;locus_tag=PHA56_RS02330;product=carbonic anhydrase family protein;protein_id=WP_014227022.1;transl_table=11 NZ_CP116214.1 RefSeq gene 485589 486470 . - . ID=gene-PHA56_RS02335;Name=prmA;gbkey=Gene;gene=prmA;gene_biotype=protein_coding;locus_tag=PHA56_RS02335;old_locus_tag=PHA56_02335 NZ_CP116214.1 Protein Homology CDS 485589 486470 . - 0 ID=cds-WP_014227021.1;Parent=gene-PHA56_RS02335;Dbxref=Genbank:WP_014227021.1;Name=WP_014227021.1;Ontology_term=GO:0036211,GO:0008757;gbkey=CDS;gene=prmA;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462293.1;locus_tag=PHA56_RS02335;product=50S ribosomal protein L11 methyltransferase;protein_id=WP_014227021.1;transl_table=11 NZ_CP116214.1 RefSeq gene 486482 487933 . - . ID=gene-PHA56_RS02340;Name=panF;gbkey=Gene;gene=panF;gene_biotype=protein_coding;locus_tag=PHA56_RS02340;old_locus_tag=PHA56_02340 NZ_CP116214.1 Protein Homology CDS 486482 487933 . - 0 ID=cds-WP_014227020.1;Parent=gene-PHA56_RS02340;Dbxref=Genbank:WP_014227020.1;Name=WP_014227020.1;Ontology_term=GO:0015887,GO:0015937,GO:0015498;gbkey=CDS;gene=panF;go_function=pantothenate:sodium symporter activity|0015498||IEA;go_process=pantothenate transmembrane transport|0015887||IEA,coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312157.2;locus_tag=PHA56_RS02340;product=sodium/pantothenate symporter;protein_id=WP_014227020.1;transl_table=11 NZ_CP116214.1 RefSeq gene 487923 488165 . - . ID=gene-PHA56_RS02345;Name=PHA56_RS02345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS02345;old_locus_tag=PHA56_02345 NZ_CP116214.1 Protein Homology CDS 487923 488165 . - 0 ID=cds-WP_004125848.1;Parent=gene-PHA56_RS02345;Dbxref=Genbank:WP_004125848.1;Name=WP_004125848.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003860385.1;locus_tag=PHA56_RS02345;product=YhdT family protein;protein_id=WP_004125848.1;transl_table=11 NZ_CP116214.1 RefSeq gene 488276 489625 . - . ID=gene-PHA56_RS02350;Name=accC;gbkey=Gene;gene=accC;gene_biotype=protein_coding;locus_tag=PHA56_RS02350;old_locus_tag=PHA56_02350 NZ_CP116214.1 Protein Homology CDS 488276 489625 . - 0 ID=cds-WP_004125846.1;Parent=gene-PHA56_RS02350;Dbxref=Genbank:WP_004125846.1;Name=WP_004125846.1;Ontology_term=GO:0006633,GO:0003989,GO:0004075,GO:0009317;gbkey=CDS;gene=accC;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA,biotin carboxylase activity|0004075||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009483995.1;locus_tag=PHA56_RS02350;product=acetyl-CoA carboxylase biotin carboxylase subunit;protein_id=WP_004125846.1;transl_table=11 NZ_CP116214.1 RefSeq gene 489636 490109 . - . ID=gene-PHA56_RS02355;Name=accB;gbkey=Gene;gene=accB;gene_biotype=protein_coding;locus_tag=PHA56_RS02355;old_locus_tag=PHA56_02355 NZ_CP116214.1 Protein Homology CDS 489636 490109 . - 0 ID=cds-WP_032694493.1;Parent=gene-PHA56_RS02355;Dbxref=Genbank:WP_032694493.1;Name=WP_032694493.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accB;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462289.1;locus_tag=PHA56_RS02355;product=acetyl-CoA carboxylase biotin carboxyl carrier protein;protein_id=WP_032694493.1;transl_table=11 NZ_CP116214.1 RefSeq gene 490503 491102 . - . ID=gene-PHA56_RS02360;Name=msrQ;gbkey=Gene;gene=msrQ;gene_biotype=protein_coding;locus_tag=PHA56_RS02360;old_locus_tag=PHA56_02360 NZ_CP116214.1 Protein Homology CDS 490503 491102 . - 0 ID=cds-WP_014227019.1;Parent=gene-PHA56_RS02360;Dbxref=Genbank:WP_014227019.1;Name=WP_014227019.1;gbkey=CDS;gene=msrQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001241496.1;locus_tag=PHA56_RS02360;product=protein-methionine-sulfoxide reductase heme-binding subunit MsrQ;protein_id=WP_014227019.1;transl_table=11 NZ_CP116214.1 RefSeq gene 491102 492103 . - . ID=gene-PHA56_RS02365;Name=msrP;gbkey=Gene;gene=msrP;gene_biotype=protein_coding;locus_tag=PHA56_RS02365;old_locus_tag=PHA56_02365 NZ_CP116214.1 Protein Homology CDS 491102 492103 . - 0 ID=cds-WP_014227018.1;Parent=gene-PHA56_RS02365;Dbxref=Genbank:WP_014227018.1;Name=WP_014227018.1;Ontology_term=GO:0030091,GO:0016667,GO:0043546;gbkey=CDS;gene=msrP;go_function=oxidoreductase activity%2C acting on a sulfur group of donors|0016667||IEA,molybdopterin cofactor binding|0043546||IEA;go_process=protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229093.1;locus_tag=PHA56_RS02365;product=protein-methionine-sulfoxide reductase catalytic subunit MsrP;protein_id=WP_014227018.1;transl_table=11 NZ_CP116214.1 RefSeq gene 492181 493155 . - . ID=gene-PHA56_RS02370;Name=PHA56_RS02370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS02370;old_locus_tag=PHA56_02370 NZ_CP116214.1 Protein Homology CDS 492181 493155 . - 0 ID=cds-WP_032694494.1;Parent=gene-PHA56_RS02370;Dbxref=Genbank:WP_032694494.1;Name=WP_032694494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004106258.1;locus_tag=PHA56_RS02370;product=oxidoreductase;protein_id=WP_032694494.1;transl_table=11 NZ_CP116214.1 RefSeq gene 493393 495333 . + . ID=gene-PHA56_RS02375;Name=csrD;gbkey=Gene;gene=csrD;gene_biotype=protein_coding;locus_tag=PHA56_RS02375;old_locus_tag=PHA56_02375 NZ_CP116214.1 Protein Homology CDS 493393 495333 . + 0 ID=cds-WP_014227016.1;Parent=gene-PHA56_RS02375;Dbxref=Genbank:WP_014227016.1;Name=WP_014227016.1;gbkey=CDS;gene=csrD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229091.1;locus_tag=PHA56_RS02375;product=RNase E specificity factor CsrD;protein_id=WP_014227016.1;transl_table=11 NZ_CP116214.1 RefSeq gene 495639 496682 . + . ID=gene-PHA56_RS02380;Name=mreB;gbkey=Gene;gene=mreB;gene_biotype=protein_coding;locus_tag=PHA56_RS02380;old_locus_tag=PHA56_02380 NZ_CP116214.1 Protein Homology CDS 495639 496682 . + 0 ID=cds-WP_002918653.1;Parent=gene-PHA56_RS02380;Dbxref=Genbank:WP_002918653.1;Name=WP_002918653.1;gbkey=CDS;gene=mreB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000913396.1;locus_tag=PHA56_RS02380;product=rod shape-determining protein MreB;protein_id=WP_002918653.1;transl_table=11 NZ_CP116214.1 RefSeq gene 496752 497738 . + . ID=gene-PHA56_RS02385;Name=mreC;gbkey=Gene;gene=mreC;gene_biotype=protein_coding;locus_tag=PHA56_RS02385;old_locus_tag=PHA56_02385 NZ_CP116214.1 Protein Homology CDS 496752 497738 . + 0 ID=cds-WP_004106252.1;Parent=gene-PHA56_RS02385;Dbxref=Genbank:WP_004106252.1;Name=WP_004106252.1;Ontology_term=GO:0008360;gbkey=CDS;gene=mreC;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229089.1;locus_tag=PHA56_RS02385;product=rod shape-determining protein MreC;protein_id=WP_004106252.1;transl_table=11 NZ_CP116214.1 RefSeq gene 497738 498226 . + . ID=gene-PHA56_RS02390;Name=mreD;gbkey=Gene;gene=mreD;gene_biotype=protein_coding;locus_tag=PHA56_RS02390;old_locus_tag=PHA56_02390 NZ_CP116214.1 Protein Homology CDS 497738 498226 . + 0 ID=cds-WP_004125830.1;Parent=gene-PHA56_RS02390;Dbxref=Genbank:WP_004125830.1;Name=WP_004125830.1;gbkey=CDS;gene=mreD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001487551.1;locus_tag=PHA56_RS02390;product=rod shape-determining protein MreD;protein_id=WP_004125830.1;transl_table=11 NZ_CP116214.1 RefSeq gene 498234 498815 . + . ID=gene-PHA56_RS02395;Name=PHA56_RS02395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS02395;old_locus_tag=PHA56_02395 NZ_CP116214.1 Protein Homology CDS 498234 498815 . + 0 ID=cds-WP_042946071.1;Parent=gene-PHA56_RS02395;Dbxref=Genbank:WP_042946071.1;Name=WP_042946071.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229087.1;locus_tag=PHA56_RS02395;product=Maf family protein;protein_id=WP_042946071.1;transl_table=11 NZ_CP116214.1 RefSeq gene 498818 500287 . + . ID=gene-PHA56_RS02400;Name=rng;gbkey=Gene;gene=rng;gene_biotype=protein_coding;locus_tag=PHA56_RS02400;old_locus_tag=PHA56_02400 NZ_CP116214.1 Protein Homology CDS 498818 500287 . + 0 ID=cds-WP_004125826.1;Parent=gene-PHA56_RS02400;Dbxref=Genbank:WP_004125826.1;Name=WP_004125826.1;Ontology_term=GO:0006396,GO:0003723,GO:0004540;gbkey=CDS;gene=rng;go_function=RNA binding|0003723||IEA,ribonuclease activity|0004540||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818051.1;locus_tag=PHA56_RS02400;product=ribonuclease G;protein_id=WP_004125826.1;transl_table=11 NZ_CP116214.1 RefSeq gene 500367 504164 . + . ID=gene-PHA56_RS02405;Name=yhdP;gbkey=Gene;gene=yhdP;gene_biotype=protein_coding;locus_tag=PHA56_RS02405;old_locus_tag=PHA56_02405 NZ_CP116214.1 Protein Homology CDS 500367 504164 . + 0 ID=cds-WP_032720723.1;Parent=gene-PHA56_RS02405;Dbxref=Genbank:WP_032720723.1;Name=WP_032720723.1;gbkey=CDS;gene=yhdP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229085.1;locus_tag=PHA56_RS02405;product=AsmA2 domain-containing protein YhdP;protein_id=WP_032720723.1;transl_table=11 NZ_CP116214.1 RefSeq gene 504253 505698 . + . ID=gene-PHA56_RS02410;Name=tldD;gbkey=Gene;gene=tldD;gene_biotype=protein_coding;locus_tag=PHA56_RS02410;old_locus_tag=PHA56_02410 NZ_CP116214.1 Protein Homology CDS 504253 505698 . + 0 ID=cds-WP_004854666.1;Parent=gene-PHA56_RS02410;Dbxref=Genbank:WP_004854666.1;Name=WP_004854666.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=tldD;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007888214.1;locus_tag=PHA56_RS02410;product=metalloprotease TldD;protein_id=WP_004854666.1;transl_table=11 NZ_CP116214.1 RefSeq gene 505757 506503 . + . ID=gene-PHA56_RS02415;Name=fucR;gbkey=Gene;gene=fucR;gene_biotype=protein_coding;locus_tag=PHA56_RS02415;old_locus_tag=PHA56_02415 NZ_CP116214.1 Protein Homology CDS 505757 506503 . + 0 ID=cds-WP_014227013.1;Parent=gene-PHA56_RS02415;Dbxref=Genbank:WP_014227013.1;Name=WP_014227013.1;gbkey=CDS;gene=fucR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004125812.1;locus_tag=PHA56_RS02415;product=L-fucose operon activator;protein_id=WP_014227013.1;transl_table=11 NZ_CP116214.1 RefSeq gene 506500 507429 . - . ID=gene-PHA56_RS02420;Name=aaeR;gbkey=Gene;gene=aaeR;gene_biotype=protein_coding;locus_tag=PHA56_RS02420;old_locus_tag=PHA56_02420 NZ_CP116214.1 Protein Homology CDS 506500 507429 . - 0 ID=cds-WP_004854659.1;Parent=gene-PHA56_RS02420;Dbxref=Genbank:WP_004854659.1;Name=WP_004854659.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=aaeR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312143.1;locus_tag=PHA56_RS02420;product=HTH-type transcriptional activator AaeR;protein_id=WP_004854659.1;transl_table=11 NZ_CP116214.1 RefSeq gene 507561 507764 . + . ID=gene-PHA56_RS02425;Name=aaeX;gbkey=Gene;gene=aaeX;gene_biotype=protein_coding;locus_tag=PHA56_RS02425;old_locus_tag=PHA56_02425 NZ_CP116214.1 Protein Homology CDS 507561 507764 . + 0 ID=cds-WP_002918640.1;Parent=gene-PHA56_RS02425;Dbxref=Genbank:WP_002918640.1;Name=WP_002918640.1;gbkey=CDS;gene=aaeX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000051842.1;locus_tag=PHA56_RS02425;product=p-hydroxybenzoic acid efflux pump operon protein AaeX;protein_id=WP_002918640.1;transl_table=11 NZ_CP116214.1 RefSeq gene 507772 508704 . + . ID=gene-PHA56_RS02430;Name=aaeA;gbkey=Gene;gene=aaeA;gene_biotype=protein_coding;locus_tag=PHA56_RS02430;old_locus_tag=PHA56_02430 NZ_CP116214.1 Protein Homology CDS 507772 508704 . + 0 ID=cds-WP_271292955.1;Parent=gene-PHA56_RS02430;Dbxref=Genbank:WP_271292955.1;Name=WP_271292955.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=aaeA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229081.1;locus_tag=PHA56_RS02430;product=p-hydroxybenzoic acid efflux pump subunit AaeA;protein_id=WP_271292955.1;transl_table=11 NZ_CP116214.1 RefSeq gene 508710 510677 . + . ID=gene-PHA56_RS02435;Name=aaeB;gbkey=Gene;gene=aaeB;gene_biotype=protein_coding;locus_tag=PHA56_RS02435;old_locus_tag=PHA56_02435 NZ_CP116214.1 Protein Homology CDS 508710 510677 . + 0 ID=cds-WP_032720724.1;Parent=gene-PHA56_RS02435;Dbxref=Genbank:WP_032720724.1;Name=WP_032720724.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=aaeB;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012540451.1;locus_tag=PHA56_RS02435;product=p-hydroxybenzoic acid efflux pump subunit AaeB;protein_id=WP_032720724.1;transl_table=11 NZ_CP116214.1 RefSeq gene 510817 511092 . + . ID=gene-PHA56_RS02440;Name=PHA56_RS02440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS02440;old_locus_tag=PHA56_02440 NZ_CP116214.1 Protein Homology CDS 510817 511092 . + 0 ID=cds-WP_004854654.1;Parent=gene-PHA56_RS02440;Dbxref=Genbank:WP_004854654.1;Name=WP_004854654.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229079.1;locus_tag=PHA56_RS02440;product=barstar family protein;protein_id=WP_004854654.1;transl_table=11 NZ_CP116214.1 RefSeq gene 511143 511409 . - . ID=gene-PHA56_RS02445;Name=yhcN-B;gbkey=Gene;gene=yhcN-B;gene_biotype=protein_coding;locus_tag=PHA56_RS02445;old_locus_tag=PHA56_02445 NZ_CP116214.1 Protein Homology CDS 511143 511409 . - 0 ID=cds-WP_004106229.1;Parent=gene-PHA56_RS02445;Dbxref=Genbank:WP_004106229.1;Name=WP_004106229.1;gbkey=CDS;gene=yhcN-B;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462272.1;locus_tag=PHA56_RS02445;product=DUF1471 family stress response protein YhcN-B;protein_id=WP_004106229.1;transl_table=11 NZ_CP116214.1 RefSeq gene 511512 511775 . - . ID=gene-PHA56_RS02450;Name=yhcN;gbkey=Gene;gene=yhcN;gene_biotype=protein_coding;locus_tag=PHA56_RS02450;old_locus_tag=PHA56_02450 NZ_CP116214.1 Protein Homology CDS 511512 511775 . - 0 ID=cds-WP_004106226.1;Parent=gene-PHA56_RS02450;Dbxref=Genbank:WP_004106226.1;Name=WP_004106226.1;gbkey=CDS;gene=yhcN;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229077.1;locus_tag=PHA56_RS02450;product=peroxide/acid stress response protein YhcN;protein_id=WP_004106226.1;transl_table=11 NZ_CP116214.1 RefSeq gene 512129 512599 . - . ID=gene-PHA56_RS02455;Name=argR;gbkey=Gene;gene=argR;gene_biotype=protein_coding;locus_tag=PHA56_RS02455;old_locus_tag=PHA56_02455 NZ_CP116214.1 Protein Homology CDS 512129 512599 . - 0 ID=cds-WP_004106225.1;Parent=gene-PHA56_RS02455;Dbxref=Genbank:WP_004106225.1;Name=WP_004106225.1;gbkey=CDS;gene=argR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210173.1;locus_tag=PHA56_RS02455;product=transcriptional regulator ArgR;protein_id=WP_004106225.1;transl_table=11 NZ_CP116214.1 RefSeq gene 513013 513951 . + . ID=gene-PHA56_RS02460;Name=mdh;gbkey=Gene;gene=mdh;gene_biotype=protein_coding;locus_tag=PHA56_RS02460;old_locus_tag=PHA56_02460 NZ_CP116214.1 Protein Homology CDS 513013 513951 . + 0 ID=cds-WP_004854646.1;Parent=gene-PHA56_RS02460;Dbxref=Genbank:WP_004854646.1;Name=WP_004854646.1;Ontology_term=GO:0006099,GO:0030060;gbkey=CDS;gene=mdh;go_function=L-malate dehydrogenase activity|0030060||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000861594.1;locus_tag=PHA56_RS02460;product=malate dehydrogenase;protein_id=WP_004854646.1;transl_table=11 NZ_CP116214.1 RefSeq gene 514083 514727 . + . ID=gene-PHA56_RS02465;Name=PHA56_RS02465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS02465;old_locus_tag=PHA56_02465 NZ_CP116214.1 Protein Homology CDS 514083 514727 . + 0 ID=cds-WP_014227010.1;Parent=gene-PHA56_RS02465;Dbxref=Genbank:WP_014227010.1;Name=WP_014227010.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004106223.1;locus_tag=PHA56_RS02465;product=GntR family transcriptional regulator;protein_id=WP_014227010.1;transl_table=11 NZ_CP116214.1 RefSeq gene 514699 515364 . + . ID=gene-PHA56_RS02470;Name=PHA56_RS02470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS02470;old_locus_tag=PHA56_02470 NZ_CP116214.1 Protein Homology CDS 514699 515364 . + 0 ID=cds-WP_014227009.1;Parent=gene-PHA56_RS02470;Dbxref=Genbank:WP_014227009.1;Name=WP_014227009.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462267.1;locus_tag=PHA56_RS02470;product=GntR family transcriptional regulator;protein_id=WP_014227009.1;transl_table=11 NZ_CP116214.1 RefSeq gene 515575 516843 . + . ID=gene-PHA56_RS02475;Name=PHA56_RS02475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS02475;old_locus_tag=PHA56_02475 NZ_CP116214.1 Protein Homology CDS 515575 516843 . + 0 ID=cds-WP_032694499.1;Parent=gene-PHA56_RS02475;Dbxref=Genbank:WP_032694499.1;Name=WP_032694499.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462266.1;locus_tag=PHA56_RS02475;product=SLC13 family permease;protein_id=WP_032694499.1;transl_table=11 NZ_CP116214.1 RefSeq gene 516876 517775 . + . ID=gene-PHA56_RS02480;Name=ttdA;gbkey=Gene;gene=ttdA;gene_biotype=protein_coding;locus_tag=PHA56_RS02480;old_locus_tag=PHA56_02480 NZ_CP116214.1 Protein Homology CDS 516876 517775 . + 0 ID=cds-WP_014227007.1;Parent=gene-PHA56_RS02480;Dbxref=Genbank:WP_014227007.1;Name=WP_014227007.1;gbkey=CDS;gene=ttdA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462265.1;locus_tag=PHA56_RS02480;product=L(+)-tartrate dehydratase subunit alpha;protein_id=WP_014227007.1;transl_table=11 NZ_CP116214.1 RefSeq gene 517775 518392 . + . ID=gene-PHA56_RS02485;Name=ttdB;gbkey=Gene;gene=ttdB;gene_biotype=protein_coding;locus_tag=PHA56_RS02485;old_locus_tag=PHA56_02485 NZ_CP116214.1 Protein Homology CDS 517775 518392 . + 0 ID=cds-WP_014227006.1;Parent=gene-PHA56_RS02485;Dbxref=Genbank:WP_014227006.1;Name=WP_014227006.1;Ontology_term=GO:0016836;gbkey=CDS;gene=ttdB;go_function=hydro-lyase activity|0016836||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462264.1;locus_tag=PHA56_RS02485;product=L(+)-tartrate dehydratase subunit beta;protein_id=WP_014227006.1;transl_table=11 NZ_CP116214.1 RefSeq gene 518549 518800 . + . ID=gene-PHA56_RS02490;Name=PHA56_RS02490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS02490;old_locus_tag=PHA56_02490 NZ_CP116214.1 Protein Homology CDS 518549 518800 . + 0 ID=cds-WP_038423748.1;Parent=gene-PHA56_RS02490;Dbxref=Genbank:WP_038423748.1;Name=WP_038423748.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225042.1;locus_tag=PHA56_RS02490;product=oxaloacetate decarboxylase subunit gamma;protein_id=WP_038423748.1;transl_table=11 NZ_CP116214.1 RefSeq gene 518816 520585 . + . ID=gene-PHA56_RS02495;Name=oadA;gbkey=Gene;gene=oadA;gene_biotype=protein_coding;locus_tag=PHA56_RS02495;old_locus_tag=PHA56_02495 NZ_CP116214.1 Protein Homology CDS 518816 520585 . + 0 ID=cds-WP_208787279.1;Parent=gene-PHA56_RS02495;Dbxref=Genbank:WP_208787279.1;Name=WP_208787279.1;Ontology_term=GO:0006814,GO:0008948,GO:0015081;gbkey=CDS;gene=oadA;go_function=oxaloacetate decarboxylase activity|0008948||IEA,sodium ion transmembrane transporter activity|0015081||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225041.1;locus_tag=PHA56_RS02495;product=sodium-extruding oxaloacetate decarboxylase subunit alpha;protein_id=WP_208787279.1;transl_table=11 NZ_CP116214.1 RefSeq gene 520601 521902 . + . ID=gene-PHA56_RS02500;Name=PHA56_RS02500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS02500;old_locus_tag=PHA56_02500 NZ_CP116214.1 Protein Homology CDS 520601 521902 . + 0 ID=cds-WP_038423744.1;Parent=gene-PHA56_RS02500;Dbxref=Genbank:WP_038423744.1;Name=WP_038423744.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225040.1;locus_tag=PHA56_RS02500;product=oxaloacetate decarboxylase subunit beta;protein_id=WP_038423744.1;transl_table=11 NZ_CP116214.1 RefSeq gene 522019 522720 . + . ID=gene-PHA56_RS02505;Name=PHA56_RS02505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS02505;old_locus_tag=PHA56_02505 NZ_CP116214.1 Protein Homology CDS 522019 522720 . + 0 ID=cds-WP_032720211.1;Parent=gene-PHA56_RS02505;Dbxref=Genbank:WP_032720211.1;Name=WP_032720211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459748.1;locus_tag=PHA56_RS02505;product=membrane protein associated with oxaloacetate decarboxylase;protein_id=WP_032720211.1;transl_table=11 NZ_CP116214.1 RefSeq gene 522748 523809 . - . ID=gene-PHA56_RS02510;Name=degS;gbkey=Gene;gene=degS;gene_biotype=protein_coding;locus_tag=PHA56_RS02510;old_locus_tag=PHA56_02510 NZ_CP116214.1 Protein Homology CDS 522748 523809 . - 0 ID=cds-WP_009651894.1;Parent=gene-PHA56_RS02510;Dbxref=Genbank:WP_009651894.1;Name=WP_009651894.1;Ontology_term=GO:0006508,GO:0004252;gbkey=CDS;gene=degS;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229074.1;locus_tag=PHA56_RS02510;product=outer membrane-stress sensor serine endopeptidase DegS;protein_id=WP_009651894.1;transl_table=11 NZ_CP116214.1 RefSeq gene 523896 525263 . - . ID=gene-PHA56_RS02515;Name=degQ;gbkey=Gene;gene=degQ;gene_biotype=protein_coding;locus_tag=PHA56_RS02515;old_locus_tag=PHA56_02515 NZ_CP116214.1 Protein Homology CDS 523896 525263 . - 0 ID=cds-WP_014226999.1;Parent=gene-PHA56_RS02515;Dbxref=Genbank:WP_014226999.1;Name=WP_014226999.1;Ontology_term=GO:0006508,GO:0004252,GO:0005515;gbkey=CDS;gene=degQ;go_function=serine-type endopeptidase activity|0004252||IEA,protein binding|0005515||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229073.1;locus_tag=PHA56_RS02515;product=serine endoprotease DegQ;protein_id=WP_014226999.1;transl_table=11 NZ_CP116214.1 RefSeq gene 525436 525834 . - . ID=gene-PHA56_RS02520;Name=zapG;gbkey=Gene;gene=zapG;gene_biotype=protein_coding;locus_tag=PHA56_RS02520;old_locus_tag=PHA56_02520 NZ_CP116214.1 Protein Homology CDS 525436 525834 . - 0 ID=cds-WP_004854637.1;Parent=gene-PHA56_RS02520;Dbxref=Genbank:WP_004854637.1;Name=WP_004854637.1;gbkey=CDS;gene=zapG;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229072.1;locus_tag=PHA56_RS02520;product=Z-ring associated protein ZapG;protein_id=WP_004854637.1;transl_table=11 NZ_CP116214.1 RefSeq gene 526025 527158 . + . ID=gene-PHA56_RS02525;Name=zapE;gbkey=Gene;gene=zapE;gene_biotype=protein_coding;locus_tag=PHA56_RS02525;old_locus_tag=PHA56_02525 NZ_CP116214.1 Protein Homology CDS 526025 527158 . + 0 ID=cds-WP_032693267.1;Parent=gene-PHA56_RS02525;Dbxref=Genbank:WP_032693267.1;Name=WP_032693267.1;Ontology_term=GO:0051301,GO:0005524,GO:0016887;gbkey=CDS;gene=zapE;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709029.1;locus_tag=PHA56_RS02525;product=cell division protein ZapE;protein_id=WP_032693267.1;transl_table=11 NZ_CP116214.1 RefSeq gene 527378 527806 . + . ID=gene-PHA56_RS02530;Name=rplM;gbkey=Gene;gene=rplM;gene_biotype=protein_coding;locus_tag=PHA56_RS02530;old_locus_tag=PHA56_02530 NZ_CP116214.1 Protein Homology CDS 527378 527806 . + 0 ID=cds-WP_004106200.1;Parent=gene-PHA56_RS02530;Dbxref=Genbank:WP_004106200.1;Name=WP_004106200.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplM;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010847760.1;locus_tag=PHA56_RS02530;product=50S ribosomal protein L13;protein_id=WP_004106200.1;transl_table=11 NZ_CP116214.1 RefSeq gene 527822 528214 . + . ID=gene-PHA56_RS02535;Name=rpsI;gbkey=Gene;gene=rpsI;gene_biotype=protein_coding;locus_tag=PHA56_RS02535;old_locus_tag=PHA56_02535 NZ_CP116214.1 Protein Homology CDS 527822 528214 . + 0 ID=cds-WP_000829815.1;Parent=gene-PHA56_RS02535;Dbxref=Genbank:WP_000829815.1;Name=WP_000829815.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000829824.1;locus_tag=PHA56_RS02535;product=30S ribosomal protein S9;protein_id=WP_000829815.1;transl_table=11 NZ_CP116214.1 RefSeq gene 528526 529164 . + . ID=gene-PHA56_RS02540;Name=sspA;gbkey=Gene;gene=sspA;gene_biotype=protein_coding;locus_tag=PHA56_RS02540;old_locus_tag=PHA56_02540 NZ_CP116214.1 Protein Homology CDS 528526 529164 . + 0 ID=cds-WP_014226997.1;Parent=gene-PHA56_RS02540;Dbxref=Genbank:WP_014226997.1;Name=WP_014226997.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=sspA;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000257299.1;locus_tag=PHA56_RS02540;product=stringent starvation protein A;protein_id=WP_014226997.1;transl_table=11 NZ_CP116214.1 RefSeq gene 529168 529656 . + . ID=gene-PHA56_RS02545;Name=sspB;gbkey=Gene;gene=sspB;gene_biotype=protein_coding;locus_tag=PHA56_RS02545;old_locus_tag=PHA56_02545 NZ_CP116214.1 Protein Homology CDS 529168 529656 . + 0 ID=cds-WP_014226996.1;Parent=gene-PHA56_RS02545;Dbxref=Genbank:WP_014226996.1;Name=WP_014226996.1;gbkey=CDS;gene=sspB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229067.1;locus_tag=PHA56_RS02545;product=ClpXP protease specificity-enhancing factor;protein_id=WP_014226996.1;transl_table=11 NZ_CP116214.1 RefSeq gene 529750 530556 . + . ID=gene-PHA56_RS02550;Name=nanR;gbkey=Gene;gene=nanR;gene_biotype=protein_coding;locus_tag=PHA56_RS02550;old_locus_tag=PHA56_02550 NZ_CP116214.1 Protein Homology CDS 529750 530556 . + 0 ID=cds-WP_032693266.1;Parent=gene-PHA56_RS02550;Dbxref=Genbank:WP_032693266.1;Name=WP_032693266.1;gbkey=CDS;gene=nanR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226995.1;locus_tag=PHA56_RS02550;product=transcriptional regulator NanR;protein_id=WP_032693266.1;transl_table=11 NZ_CP116214.1 RefSeq gene 530676 531569 . + . ID=gene-PHA56_RS02555;Name=nanA;gbkey=Gene;gene=nanA;gene_biotype=protein_coding;locus_tag=PHA56_RS02555;old_locus_tag=PHA56_02555 NZ_CP116214.1 Protein Homology CDS 530676 531569 . + 0 ID=cds-WP_014839641.1;Parent=gene-PHA56_RS02555;Dbxref=Genbank:WP_014839641.1;Name=WP_014839641.1;Ontology_term=GO:0006040,GO:0009273,GO:0008747;gbkey=CDS;gene=nanA;go_function=N-acetylneuraminate lyase activity|0008747||IEA;go_process=amino sugar metabolic process|0006040||IEA,peptidoglycan-based cell wall biogenesis|0009273||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312125.1;locus_tag=PHA56_RS02555;product=N-acetylneuraminate lyase;protein_id=WP_014839641.1;transl_table=11 NZ_CP116214.1 RefSeq gene 531676 533163 . + . ID=gene-PHA56_RS02560;Name=PHA56_RS02560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS02560;old_locus_tag=PHA56_02560 NZ_CP116214.1 Protein Homology CDS 531676 533163 . + 0 ID=cds-WP_032693265.1;Parent=gene-PHA56_RS02560;Dbxref=Genbank:WP_032693265.1;Name=WP_032693265.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004206222.1;locus_tag=PHA56_RS02560;product=MFS transporter;protein_id=WP_032693265.1;transl_table=11 NZ_CP116214.1 RefSeq gene 533213 533902 . + . ID=gene-PHA56_RS02565;Name=PHA56_RS02565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS02565;old_locus_tag=PHA56_02565 NZ_CP116214.1 Protein Homology CDS 533213 533902 . + 0 ID=cds-WP_014226992.1;Parent=gene-PHA56_RS02565;Dbxref=Genbank:WP_014226992.1;Name=WP_014226992.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226992.1;locus_tag=PHA56_RS02565;product=N-acetylmannosamine-6-phosphate 2-epimerase;protein_id=WP_014226992.1;transl_table=11 NZ_CP116214.1 RefSeq gene 533899 534771 . + . ID=gene-PHA56_RS02570;Name=PHA56_RS02570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS02570;old_locus_tag=PHA56_02570 NZ_CP116214.1 Protein Homology CDS 533899 534771 . + 0 ID=cds-WP_014226991.1;Parent=gene-PHA56_RS02570;Dbxref=Genbank:WP_014226991.1;Name=WP_014226991.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226991.1;locus_tag=PHA56_RS02570;product=N-acetylmannosamine kinase;protein_id=WP_014226991.1;transl_table=11 NZ_CP116214.1 RefSeq gene 534771 535238 . + . ID=gene-PHA56_RS02575;Name=nanQ;gbkey=Gene;gene=nanQ;gene_biotype=protein_coding;locus_tag=PHA56_RS02575;old_locus_tag=PHA56_02575 NZ_CP116214.1 Protein Homology CDS 534771 535238 . + 0 ID=cds-WP_014226990.1;Parent=gene-PHA56_RS02575;Dbxref=Genbank:WP_014226990.1;Name=WP_014226990.1;Ontology_term=GO:0006974;gbkey=CDS;gene=nanQ;go_process=cellular response to DNA damage stimulus|0006974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000979872.1;locus_tag=PHA56_RS02575;product=N-acetylneuraminate anomerase;protein_id=WP_014226990.1;transl_table=11 NZ_CP116214.1 RefSeq gene 535310 536728 . - . ID=gene-PHA56_RS02580;Name=gltD;gbkey=Gene;gene=gltD;gene_biotype=protein_coding;locus_tag=PHA56_RS02580;old_locus_tag=PHA56_02580 NZ_CP116214.1 Protein Homology CDS 535310 536728 . - 0 ID=cds-WP_014839637.1;Parent=gene-PHA56_RS02580;Dbxref=Genbank:WP_014839637.1;Name=WP_014839637.1;gbkey=CDS;gene=gltD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001540975.1;locus_tag=PHA56_RS02580;product=glutamate synthase subunit GltD;protein_id=WP_014839637.1;transl_table=11 NZ_CP116214.1 RefSeq gene 536738 541198 . - . ID=gene-PHA56_RS02585;Name=gltB;gbkey=Gene;gene=gltB;gene_biotype=protein_coding;locus_tag=PHA56_RS02585;old_locus_tag=PHA56_02585 NZ_CP116214.1 Protein Homology CDS 536738 541198 . - 0 ID=cds-WP_025108152.1;Parent=gene-PHA56_RS02585;Dbxref=Genbank:WP_025108152.1;Name=WP_025108152.1;Ontology_term=GO:0006537,GO:0006807,GO:0003824,GO:0015930,GO:0016491;gbkey=CDS;gene=gltB;go_function=catalytic activity|0003824||IEA,glutamate synthase activity|0015930||IEA,oxidoreductase activity|0016491||IEA;go_process=glutamate biosynthetic process|0006537||IEA,nitrogen compound metabolic process|0006807||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742510.1;locus_tag=PHA56_RS02585;product=glutamate synthase large subunit;protein_id=WP_025108152.1;transl_table=11 NZ_CP116214.1 RefSeq gene 541872 542807 . + . ID=gene-PHA56_RS02590;Name=PHA56_RS02590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS02590;old_locus_tag=PHA56_02590 NZ_CP116214.1 Protein Homology CDS 541872 542807 . + 0 ID=cds-WP_038423737.1;Parent=gene-PHA56_RS02590;Dbxref=Genbank:WP_038423737.1;Name=WP_038423737.1;Note=This family includes YhcC from E. coli K-12%2C an uncharacterized radical SAM protein.;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226987.1;locus_tag=PHA56_RS02590;product=TIGR01212 family radical SAM protein;protein_id=WP_038423737.1;transl_table=11 NZ_CP116214.1 RefSeq gene 542939 545278 . + . ID=gene-PHA56_RS02595;Name=arcB;gbkey=Gene;gene=arcB;gene_biotype=protein_coding;locus_tag=PHA56_RS02595;old_locus_tag=PHA56_02595 NZ_CP116214.1 Protein Homology CDS 542939 545278 . + 0 ID=cds-WP_014226986.1;Parent=gene-PHA56_RS02595;Dbxref=Genbank:WP_014226986.1;Name=WP_014226986.1;Ontology_term=GO:0000160,GO:0006355,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=arcB;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229058.1;locus_tag=PHA56_RS02595;product=aerobic respiration two-component sensor histidine kinase ArcB;protein_id=WP_014226986.1;transl_table=11 NZ_CP116214.1 RefSeq gene 545513 546166 . + . ID=gene-PHA56_RS02600;Name=elbB;gbkey=Gene;gene=elbB;gene_biotype=protein_coding;locus_tag=PHA56_RS02600;old_locus_tag=PHA56_02600 NZ_CP116214.1 Protein Homology CDS 545513 546166 . + 0 ID=cds-WP_014226985.1;Parent=gene-PHA56_RS02600;Dbxref=Genbank:WP_014226985.1;Name=WP_014226985.1;gbkey=CDS;gene=elbB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229057.1;locus_tag=PHA56_RS02600;product=isoprenoid biosynthesis glyoxalase ElbB;protein_id=WP_014226985.1;transl_table=11 NZ_CP116214.1 RefSeq gene 546163 546888 . + . ID=gene-PHA56_RS02605;Name=mtgA;gbkey=Gene;gene=mtgA;gene_biotype=protein_coding;locus_tag=PHA56_RS02605;old_locus_tag=PHA56_02605 NZ_CP116214.1 Protein Homology CDS 546163 546888 . + 0 ID=cds-WP_014226984.1;Parent=gene-PHA56_RS02605;Dbxref=Genbank:WP_014226984.1;Name=WP_014226984.1;Ontology_term=GO:0009252,GO:0009274,GO:0016020;gbkey=CDS;gene=mtgA;go_component=peptidoglycan-based cell wall|0009274||IEA,membrane|0016020||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229056.1;locus_tag=PHA56_RS02605;product=monofunctional biosynthetic peptidoglycan transglycosylase;protein_id=WP_014226984.1;transl_table=11 NZ_CP116214.1 RefSeq gene 546941 547213 . - . ID=gene-PHA56_RS02610;Name=npr;gbkey=Gene;gene=npr;gene_biotype=protein_coding;locus_tag=PHA56_RS02610;old_locus_tag=PHA56_02610 NZ_CP116214.1 Protein Homology CDS 546941 547213 . - 0 ID=cds-WP_004106170.1;Parent=gene-PHA56_RS02610;Dbxref=Genbank:WP_004106170.1;Name=WP_004106170.1;gbkey=CDS;gene=npr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000216792.1;locus_tag=PHA56_RS02610;product=PTS phosphocarrier protein NPr;protein_id=WP_004106170.1;transl_table=11 NZ_CP116214.1 RefSeq gene 547210 548064 . - . ID=gene-PHA56_RS02615;Name=rapZ;gbkey=Gene;gene=rapZ;gene_biotype=protein_coding;locus_tag=PHA56_RS02615;old_locus_tag=PHA56_02615 NZ_CP116214.1 Protein Homology CDS 547210 548064 . - 0 ID=cds-WP_004106169.1;Parent=gene-PHA56_RS02615;Dbxref=Genbank:WP_004106169.1;Name=WP_004106169.1;Ontology_term=GO:0005524;gbkey=CDS;gene=rapZ;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229054.1;locus_tag=PHA56_RS02615;product=RNase adapter RapZ;protein_id=WP_004106169.1;transl_table=11 NZ_CP116214.1 RefSeq gene 548110 548598 . - . ID=gene-PHA56_RS02620;Name=ptsN;gbkey=Gene;gene=ptsN;gene_biotype=protein_coding;locus_tag=PHA56_RS02620;old_locus_tag=PHA56_02620 NZ_CP116214.1 Protein Homology CDS 548110 548598 . - 0 ID=cds-WP_004854593.1;Parent=gene-PHA56_RS02620;Dbxref=Genbank:WP_004854593.1;Name=WP_004854593.1;gbkey=CDS;gene=ptsN;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229053.1;locus_tag=PHA56_RS02620;product=PTS IIA-like nitrogen regulatory protein PtsN;protein_id=WP_004854593.1;transl_table=11 NZ_CP116214.1 RefSeq gene 548664 548951 . - . ID=gene-PHA56_RS02625;Name=hpf;gbkey=Gene;gene=hpf;gene_biotype=protein_coding;locus_tag=PHA56_RS02625;old_locus_tag=PHA56_02625 NZ_CP116214.1 Protein Homology CDS 548664 548951 . - 0 ID=cds-WP_004106167.1;Parent=gene-PHA56_RS02625;Dbxref=Genbank:WP_004106167.1;Name=WP_004106167.1;Ontology_term=GO:0044238;gbkey=CDS;gene=hpf;go_process=primary metabolic process|0044238||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004125711.1;locus_tag=PHA56_RS02625;product=ribosome hibernation promoting factor;protein_id=WP_004106167.1;transl_table=11 NZ_CP116214.1 RefSeq gene 548974 550407 . - . ID=gene-PHA56_RS02630;Name=rpoN;gbkey=Gene;gene=rpoN;gene_biotype=protein_coding;locus_tag=PHA56_RS02630;old_locus_tag=PHA56_02630 NZ_CP116214.1 Protein Homology CDS 548974 550407 . - 0 ID=cds-WP_004854591.1;Parent=gene-PHA56_RS02630;Dbxref=Genbank:WP_004854591.1;Name=WP_004854591.1;Ontology_term=GO:0006352,GO:0001216,GO:0003677,GO:0016987;gbkey=CDS;gene=rpoN;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229051.1;locus_tag=PHA56_RS02630;product=RNA polymerase factor sigma-54;protein_id=WP_004854591.1;transl_table=11 NZ_CP116214.1 RefSeq gene 550455 551180 . - . ID=gene-PHA56_RS02635;Name=lptB;gbkey=Gene;gene=lptB;gene_biotype=protein_coding;locus_tag=PHA56_RS02635;old_locus_tag=PHA56_02635 NZ_CP116214.1 Protein Homology CDS 550455 551180 . - 0 ID=cds-WP_004125705.1;Parent=gene-PHA56_RS02635;Dbxref=Genbank:WP_004125705.1;Name=WP_004125705.1;Ontology_term=GO:0055085,GO:0005524,GO:0043190;gbkey=CDS;gene=lptB;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003861862.1;locus_tag=PHA56_RS02635;product=LPS export ABC transporter ATP-binding protein;protein_id=WP_004125705.1;transl_table=11 NZ_CP116214.1 RefSeq gene 551187 551732 . - . ID=gene-PHA56_RS02640;Name=lptA;gbkey=Gene;gene=lptA;gene_biotype=protein_coding;locus_tag=PHA56_RS02640;old_locus_tag=PHA56_02640 NZ_CP116214.1 Protein Homology CDS 551187 551732 . - 0 ID=cds-WP_004125703.1;Parent=gene-PHA56_RS02640;Dbxref=Genbank:WP_004125703.1;Name=WP_004125703.1;gbkey=CDS;gene=lptA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015369494.1;locus_tag=PHA56_RS02640;product=lipopolysaccharide ABC transporter substrate-binding protein LptA;protein_id=WP_004125703.1;transl_table=11 NZ_CP116214.1 RefSeq gene 551701 552276 . - . ID=gene-PHA56_RS02645;Name=lptC;gbkey=Gene;gene=lptC;gene_biotype=protein_coding;locus_tag=PHA56_RS02645;old_locus_tag=PHA56_02645 NZ_CP116214.1 Protein Homology CDS 551701 552276 . - 0 ID=cds-WP_004854587.1;Parent=gene-PHA56_RS02645;Dbxref=Genbank:WP_004854587.1;Name=WP_004854587.1;gbkey=CDS;gene=lptC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229048.1;locus_tag=PHA56_RS02645;product=LPS export ABC transporter periplasmic protein LptC;protein_id=WP_004854587.1;transl_table=11 NZ_CP116214.1 RefSeq gene 552273 552839 . - . ID=gene-PHA56_RS02650;Name=kdsC;gbkey=Gene;gene=kdsC;gene_biotype=protein_coding;locus_tag=PHA56_RS02650;old_locus_tag=PHA56_02650 NZ_CP116214.1 Protein Homology CDS 552273 552839 . - 0 ID=cds-WP_004854584.1;Parent=gene-PHA56_RS02650;Dbxref=Genbank:WP_004854584.1;Name=WP_004854584.1;Ontology_term=GO:0016788;gbkey=CDS;gene=kdsC;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229047.1;locus_tag=PHA56_RS02650;product=3-deoxy-manno-octulosonate-8-phosphatase KdsC;protein_id=WP_004854584.1;transl_table=11 NZ_CP116214.1 RefSeq gene 552854 553840 . - . ID=gene-PHA56_RS02655;Name=kdsD;gbkey=Gene;gene=kdsD;gene_biotype=protein_coding;locus_tag=PHA56_RS02655;old_locus_tag=PHA56_02655 NZ_CP116214.1 Protein Homology CDS 552854 553840 . - 0 ID=cds-WP_004854583.1;Parent=gene-PHA56_RS02655;Dbxref=Genbank:WP_004854583.1;Name=WP_004854583.1;Ontology_term=GO:1901135,GO:0016853,GO:0097367;gbkey=CDS;gene=kdsD;go_function=isomerase activity|0016853||IEA,carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417664.1;locus_tag=PHA56_RS02655;product=arabinose-5-phosphate isomerase KdsD;protein_id=WP_004854583.1;transl_table=11 NZ_CP116214.1 RefSeq gene 553855 554832 . - . ID=gene-PHA56_RS02660;Name=PHA56_RS02660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS02660;old_locus_tag=PHA56_02660 NZ_CP116214.1 Protein Homology CDS 553855 554832 . - 0 ID=cds-WP_032693263.1;Parent=gene-PHA56_RS02660;Dbxref=Genbank:WP_032693263.1;Name=WP_032693263.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229045.1;locus_tag=PHA56_RS02660;product=calcium/sodium antiporter;protein_id=WP_032693263.1;transl_table=11 NZ_CP116214.1 RefSeq gene 555042 555854 . + . ID=gene-PHA56_RS02665;Name=mlaF;gbkey=Gene;gene=mlaF;gene_biotype=protein_coding;locus_tag=PHA56_RS02665;old_locus_tag=PHA56_02665 NZ_CP116214.1 Protein Homology CDS 555042 555854 . + 0 ID=cds-WP_004125691.1;Parent=gene-PHA56_RS02665;Dbxref=Genbank:WP_004125691.1;Name=WP_004125691.1;Ontology_term=GO:0005524;gbkey=CDS;gene=mlaF;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020883529.1;locus_tag=PHA56_RS02665;product=phospholipid ABC transporter ATP-binding protein MlaF;protein_id=WP_004125691.1;transl_table=11 NZ_CP116214.1 RefSeq gene 555862 556644 . + . ID=gene-PHA56_RS02670;Name=mlaE;gbkey=Gene;gene=mlaE;gene_biotype=protein_coding;locus_tag=PHA56_RS02670;old_locus_tag=PHA56_02670 NZ_CP116214.1 Protein Homology CDS 555862 556644 . + 0 ID=cds-WP_004125690.1;Parent=gene-PHA56_RS02670;Dbxref=Genbank:WP_004125690.1;Name=WP_004125690.1;Ontology_term=GO:0043190;gbkey=CDS;gene=mlaE;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014071945.1;locus_tag=PHA56_RS02670;product=lipid asymmetry maintenance ABC transporter permease subunit MlaE;protein_id=WP_004125690.1;transl_table=11 NZ_CP116214.1 RefSeq gene 556649 557200 . + . ID=gene-PHA56_RS02675;Name=mlaD;gbkey=Gene;gene=mlaD;gene_biotype=protein_coding;locus_tag=PHA56_RS02675;old_locus_tag=PHA56_02675 NZ_CP116214.1 Protein Homology CDS 556649 557200 . + 0 ID=cds-WP_014226983.1;Parent=gene-PHA56_RS02675;Dbxref=Genbank:WP_014226983.1;Name=WP_014226983.1;Ontology_term=GO:0015914;gbkey=CDS;gene=mlaD;go_process=phospholipid transport|0015914||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229042.1;locus_tag=PHA56_RS02675;product=outer membrane lipid asymmetry maintenance protein MlaD;protein_id=WP_014226983.1;transl_table=11 NZ_CP116214.1 RefSeq gene 557219 557854 . + . ID=gene-PHA56_RS02680;Name=mlaC;gbkey=Gene;gene=mlaC;gene_biotype=protein_coding;locus_tag=PHA56_RS02680;old_locus_tag=PHA56_02680 NZ_CP116214.1 Protein Homology CDS 557219 557854 . + 0 ID=cds-WP_004125682.1;Parent=gene-PHA56_RS02680;Dbxref=Genbank:WP_004125682.1;Name=WP_004125682.1;gbkey=CDS;gene=mlaC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229041.1;locus_tag=PHA56_RS02680;product=phospholipid-binding protein MlaC;protein_id=WP_004125682.1;transl_table=11 NZ_CP116214.1 RefSeq gene 557854 558144 . + . ID=gene-PHA56_RS02685;Name=mlaB;gbkey=Gene;gene=mlaB;gene_biotype=protein_coding;locus_tag=PHA56_RS02685;old_locus_tag=PHA56_02685 NZ_CP116214.1 Protein Homology CDS 557854 558144 . + 0 ID=cds-WP_004854573.1;Parent=gene-PHA56_RS02685;Dbxref=Genbank:WP_004854573.1;Name=WP_004854573.1;gbkey=CDS;gene=mlaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004106144.1;locus_tag=PHA56_RS02685;product=lipid asymmetry maintenance protein MlaB;protein_id=WP_004854573.1;transl_table=11 NZ_CP116214.1 RefSeq gene 558280 558534 . + . ID=gene-PHA56_RS02690;Name=ibaG;gbkey=Gene;gene=ibaG;gene_biotype=protein_coding;locus_tag=PHA56_RS02690;old_locus_tag=PHA56_02690 NZ_CP116214.1 Protein Homology CDS 558280 558534 . + 0 ID=cds-WP_004106141.1;Parent=gene-PHA56_RS02690;Dbxref=Genbank:WP_004106141.1;Name=WP_004106141.1;gbkey=CDS;gene=ibaG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004106141.1;locus_tag=PHA56_RS02690;product=BolA family iron metabolism protein IbaG;protein_id=WP_004106141.1;transl_table=11 NZ_CP116214.1 RefSeq gene 558589 559848 . + . ID=gene-PHA56_RS02695;Name=murA;gbkey=Gene;gene=murA;gene_biotype=protein_coding;locus_tag=PHA56_RS02695;old_locus_tag=PHA56_02695 NZ_CP116214.1 Protein Homology CDS 558589 559848 . + 0 ID=cds-WP_004854569.1;Parent=gene-PHA56_RS02695;Dbxref=Genbank:WP_004854569.1;Name=WP_004854569.1;Ontology_term=GO:0009252,GO:0008760;gbkey=CDS;gene=murA;go_function=UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity|0008760||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004868122.1;locus_tag=PHA56_RS02695;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=WP_004854569.1;transl_table=11 NZ_CP116214.1 RefSeq gene 559914 560186 . - . ID=gene-PHA56_RS02700;Name=sfsB;gbkey=Gene;gene=sfsB;gene_biotype=protein_coding;locus_tag=PHA56_RS02700;old_locus_tag=PHA56_02700 NZ_CP116214.1 Protein Homology CDS 559914 560186 . - 0 ID=cds-WP_004854566.1;Parent=gene-PHA56_RS02700;Dbxref=Genbank:WP_004854566.1;Name=WP_004854566.1;gbkey=CDS;gene=sfsB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229037.1;locus_tag=PHA56_RS02700;product=DNA-binding transcriptional regulator SfsB;protein_id=WP_004854566.1;transl_table=11 NZ_CP116214.1 RefSeq gene 560384 561355 . - . ID=gene-PHA56_RS02705;Name=ispB;gbkey=Gene;gene=ispB;gene_biotype=protein_coding;locus_tag=PHA56_RS02705;old_locus_tag=PHA56_02705 NZ_CP116214.1 Protein Homology CDS 560384 561355 . - 0 ID=cds-WP_004854564.1;Parent=gene-PHA56_RS02705;Dbxref=Genbank:WP_004854564.1;Name=WP_004854564.1;Ontology_term=GO:0008299;gbkey=CDS;gene=ispB;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229036.1;locus_tag=PHA56_RS02705;product=octaprenyl diphosphate synthase;protein_id=WP_004854564.1;transl_table=11 NZ_CP116214.1 RefSeq gene 561616 561927 . + . ID=gene-PHA56_RS02710;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=PHA56_RS02710;old_locus_tag=PHA56_02710 NZ_CP116214.1 Protein Homology CDS 561616 561927 . + 0 ID=cds-WP_004106123.1;Parent=gene-PHA56_RS02710;Dbxref=Genbank:WP_004106123.1;Name=WP_004106123.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplU;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015960603.1;locus_tag=PHA56_RS02710;product=50S ribosomal protein L21;protein_id=WP_004106123.1;transl_table=11 NZ_CP116214.1 RefSeq gene 561947 562204 . + . ID=gene-PHA56_RS02715;Name=rpmA;gbkey=Gene;gene=rpmA;gene_biotype=protein_coding;locus_tag=PHA56_RS02715;old_locus_tag=PHA56_02715 NZ_CP116214.1 Protein Homology CDS 561947 562204 . + 0 ID=cds-WP_003861831.1;Parent=gene-PHA56_RS02715;Dbxref=Genbank:WP_003861831.1;Name=WP_003861831.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmA;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933559.1;locus_tag=PHA56_RS02715;product=50S ribosomal protein L27;protein_id=WP_003861831.1;transl_table=11 NZ_CP116214.1 RefSeq gene 562300 563265 . + . ID=gene-PHA56_RS02720;Name=PHA56_RS02720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS02720;old_locus_tag=PHA56_02720 NZ_CP116214.1 Protein Homology CDS 562300 563265 . + 0 ID=cds-WP_014226981.1;Parent=gene-PHA56_RS02720;Dbxref=Genbank:WP_014226981.1;Name=WP_014226981.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012135318.1;locus_tag=PHA56_RS02720;product=DMT family transporter;protein_id=WP_014226981.1;transl_table=11 NZ_CP116214.1 RefSeq gene 563281 564453 . + . ID=gene-PHA56_RS02725;Name=cgtA;gbkey=Gene;gene=cgtA;gene_biotype=protein_coding;locus_tag=PHA56_RS02725;old_locus_tag=PHA56_02725 NZ_CP116214.1 Protein Homology CDS 563281 564453 . + 0 ID=cds-WP_014226980.1;Parent=gene-PHA56_RS02725;Dbxref=Genbank:WP_014226980.1;Name=WP_014226980.1;Ontology_term=GO:0042254,GO:0005525;gbkey=CDS;gene=cgtA;go_function=GTP binding|0005525||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229032.1;locus_tag=PHA56_RS02725;product=Obg family GTPase CgtA;protein_id=WP_014226980.1;transl_table=11 NZ_CP116214.1 RefSeq gene 564500 565933 . - . ID=gene-PHA56_RS02730;Name=dacB;gbkey=Gene;gene=dacB;gene_biotype=protein_coding;locus_tag=PHA56_RS02730;old_locus_tag=PHA56_02730 NZ_CP116214.1 Protein Homology CDS 564500 565933 . - 0 ID=cds-WP_004854556.1;Parent=gene-PHA56_RS02730;Dbxref=Genbank:WP_004854556.1;Name=WP_004854556.1;Ontology_term=GO:0006508,GO:0004185;gbkey=CDS;gene=dacB;go_function=serine-type carboxypeptidase activity|0004185||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001212660.1;locus_tag=PHA56_RS02730;product=serine-type D-Ala-D-Ala carboxypeptidase;protein_id=WP_004854556.1;transl_table=11 NZ_CP116214.1 RefSeq gene 566168 566644 . + . ID=gene-PHA56_RS02735;Name=greA;gbkey=Gene;gene=greA;gene_biotype=protein_coding;locus_tag=PHA56_RS02735;old_locus_tag=PHA56_02735 NZ_CP116214.1 Protein Homology CDS 566168 566644 . + 0 ID=cds-WP_038423735.1;Parent=gene-PHA56_RS02735;Dbxref=Genbank:WP_038423735.1;Name=WP_038423735.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=greA;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006178768.1;locus_tag=PHA56_RS02735;product=transcription elongation factor GreA;protein_id=WP_038423735.1;transl_table=11 NZ_CP116214.1 RefSeq gene 566797 567090 . - . ID=gene-PHA56_RS02740;Name=yhbY;gbkey=Gene;gene=yhbY;gene_biotype=protein_coding;locus_tag=PHA56_RS02740;old_locus_tag=PHA56_02740 NZ_CP116214.1 Protein Homology CDS 566797 567090 . - 0 ID=cds-WP_004139797.1;Parent=gene-PHA56_RS02740;Dbxref=Genbank:WP_004139797.1;Name=WP_004139797.1;gbkey=CDS;gene=yhbY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014833438.1;locus_tag=PHA56_RS02740;product=ribosome assembly RNA-binding protein YhbY;protein_id=WP_004139797.1;transl_table=11 NZ_CP116214.1 RefSeq gene 567215 567844 . + . ID=gene-PHA56_RS02745;Name=rlmE;gbkey=Gene;gene=rlmE;gene_biotype=protein_coding;locus_tag=PHA56_RS02745;old_locus_tag=PHA56_02745 NZ_CP116214.1 Protein Homology CDS 567215 567844 . + 0 ID=cds-WP_119834578.1;Parent=gene-PHA56_RS02745;Dbxref=Genbank:WP_119834578.1;Name=WP_119834578.1;Ontology_term=GO:0001510,GO:0006364,GO:0016436;gbkey=CDS;gene=rlmE;go_function=rRNA (uridine) methyltransferase activity|0016436||IEA;go_process=RNA methylation|0001510||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229028.1;locus_tag=PHA56_RS02745;product=23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE;protein_id=WP_119834578.1;transl_table=11 NZ_CP116214.1 RefSeq gene 567944 569878 . + . ID=gene-PHA56_RS02750;Name=ftsH;gbkey=Gene;gene=ftsH;gene_biotype=protein_coding;locus_tag=PHA56_RS02750;old_locus_tag=PHA56_02750 NZ_CP116214.1 Protein Homology CDS 567944 569878 . + 0 ID=cds-WP_004854549.1;Parent=gene-PHA56_RS02750;Dbxref=Genbank:WP_004854549.1;Name=WP_004854549.1;Ontology_term=GO:0006508,GO:0004176,GO:0004222;gbkey=CDS;gene=ftsH;go_function=ATP-dependent peptidase activity|0004176||IEA,metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014833437.1;locus_tag=PHA56_RS02750;product=ATP-dependent zinc metalloprotease FtsH;protein_id=WP_004854549.1;transl_table=11 NZ_CP116214.1 RefSeq gene 569977 570825 . + . ID=gene-PHA56_RS02755;Name=folP;gbkey=Gene;gene=folP;gene_biotype=protein_coding;locus_tag=PHA56_RS02755;old_locus_tag=PHA56_02755 NZ_CP116214.1 Protein Homology CDS 569977 570825 . + 0 ID=cds-WP_014226978.1;Parent=gene-PHA56_RS02755;Dbxref=Genbank:WP_014226978.1;Name=WP_014226978.1;Ontology_term=GO:0004156;gbkey=CDS;gene=folP;go_function=dihydropteroate synthase activity|0004156||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229026.1;locus_tag=PHA56_RS02755;product=dihydropteroate synthase;protein_id=WP_014226978.1;transl_table=11 NZ_CP116214.1 RefSeq gene 570818 572155 . + . ID=gene-PHA56_RS02760;Name=glmM;gbkey=Gene;gene=glmM;gene_biotype=protein_coding;locus_tag=PHA56_RS02760;old_locus_tag=PHA56_02760 NZ_CP116214.1 Protein Homology CDS 570818 572155 . + 0 ID=cds-WP_014226977.1;Parent=gene-PHA56_RS02760;Dbxref=Genbank:WP_014226977.1;Name=WP_014226977.1;Ontology_term=GO:0005975,GO:0000287,GO:0008966,GO:0016868;gbkey=CDS;gene=glmM;go_function=magnesium ion binding|0000287||IEA,phosphoglucosamine mutase activity|0008966||IEA,intramolecular transferase activity%2C phosphotransferases|0016868||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229025.1;locus_tag=PHA56_RS02760;product=phosphoglucosamine mutase;protein_id=WP_014226977.1;transl_table=11 NZ_CP116214.1 RefSeq gene 572385 572714 . + . ID=gene-PHA56_RS02765;Name=secG;gbkey=Gene;gene=secG;gene_biotype=protein_coding;locus_tag=PHA56_RS02765;old_locus_tag=PHA56_02765 NZ_CP116214.1 Protein Homology CDS 572385 572714 . + 0 ID=cds-WP_004106103.1;Parent=gene-PHA56_RS02765;Dbxref=Genbank:WP_004106103.1;Name=WP_004106103.1;Ontology_term=GO:0043952,GO:0015450,GO:0005886;gbkey=CDS;gene=secG;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229024.1;locus_tag=PHA56_RS02765;product=preprotein translocase subunit SecG;protein_id=WP_004106103.1;transl_table=11 NZ_CP116214.1 RefSeq gene 572729 572815 . + . ID=gene-PHA56_RS02770;Name=PHA56_RS02770;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA56_RS02770;old_locus_tag=PHA56_02770 NZ_CP116214.1 tRNAscan-SE tRNA 572729 572815 . + . ID=rna-PHA56_RS02770;Parent=gene-PHA56_RS02770;anticodon=(pos:572763..572765);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS02770;product=tRNA-Leu NZ_CP116214.1 tRNAscan-SE exon 572729 572815 . + . ID=exon-PHA56_RS02770-1;Parent=rna-PHA56_RS02770;anticodon=(pos:572763..572765);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS02770;product=tRNA-Leu NZ_CP116214.1 RefSeq gene 572967 574310 . - . ID=gene-PHA56_RS02775;Name=argG;gbkey=Gene;gene=argG;gene_biotype=protein_coding;locus_tag=PHA56_RS02775;old_locus_tag=PHA56_02775 NZ_CP116214.1 Protein Homology CDS 572967 574310 . - 0 ID=cds-WP_004106101.1;Parent=gene-PHA56_RS02775;Dbxref=Genbank:WP_004106101.1;Name=WP_004106101.1;Ontology_term=GO:0006526,GO:0004055,GO:0005524,GO:0042803;gbkey=CDS;gene=argG;go_function=argininosuccinate synthase activity|0004055||IEA,ATP binding|0005524||IEA,protein homodimerization activity|0042803||IEA;go_process=arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229019.1;locus_tag=PHA56_RS02775;product=argininosuccinate synthase;protein_id=WP_004106101.1;transl_table=11 NZ_CP116214.1 RefSeq gene 574619 574695 . + . ID=gene-PHA56_RS02780;Name=PHA56_RS02780;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA56_RS02780;old_locus_tag=PHA56_02780 NZ_CP116214.1 tRNAscan-SE tRNA 574619 574695 . + . ID=rna-PHA56_RS02780;Parent=gene-PHA56_RS02780;anticodon=(pos:574653..574655);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS02780;product=tRNA-Met NZ_CP116214.1 tRNAscan-SE exon 574619 574695 . + . ID=exon-PHA56_RS02780-1;Parent=rna-PHA56_RS02780;anticodon=(pos:574653..574655);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS02780;product=tRNA-Met NZ_CP116214.1 RefSeq gene 574902 575354 . + . ID=gene-PHA56_RS02785;Name=rimP;gbkey=Gene;gene=rimP;gene_biotype=protein_coding;locus_tag=PHA56_RS02785;old_locus_tag=PHA56_02785 NZ_CP116214.1 Protein Homology CDS 574902 575354 . + 0 ID=cds-WP_004125659.1;Parent=gene-PHA56_RS02785;Dbxref=Genbank:WP_004125659.1;Name=WP_004125659.1;Ontology_term=GO:0042274;gbkey=CDS;gene=rimP;go_process=ribosomal small subunit biogenesis|0042274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004125659.1;locus_tag=PHA56_RS02785;product=ribosome maturation factor RimP;protein_id=WP_004125659.1;transl_table=11 NZ_CP116214.1 RefSeq gene 575382 576869 . + . ID=gene-PHA56_RS02790;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=protein_coding;locus_tag=PHA56_RS02790;old_locus_tag=PHA56_02790 NZ_CP116214.1 Protein Homology CDS 575382 576869 . + 0 ID=cds-WP_004854539.1;Parent=gene-PHA56_RS02790;Dbxref=Genbank:WP_004854539.1;Name=WP_004854539.1;Ontology_term=GO:0006353;gbkey=CDS;gene=nusA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005131833.1;locus_tag=PHA56_RS02790;product=transcription termination factor NusA;protein_id=WP_004854539.1;transl_table=11 NZ_CP116214.1 RefSeq gene 576894 579584 . + . ID=gene-PHA56_RS02795;Name=infB;gbkey=Gene;gene=infB;gene_biotype=protein_coding;locus_tag=PHA56_RS02795;old_locus_tag=PHA56_02795 NZ_CP116214.1 Protein Homology CDS 576894 579584 . + 0 ID=cds-WP_004106093.1;Parent=gene-PHA56_RS02795;Dbxref=Genbank:WP_004106093.1;Name=WP_004106093.1;Ontology_term=GO:0006413,GO:0003743,GO:0005737;gbkey=CDS;gene=infB;go_component=cytoplasm|0005737||IEA;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229014.1;locus_tag=PHA56_RS02795;product=translation initiation factor IF-2;protein_id=WP_004106093.1;transl_table=11 NZ_CP116214.1 RefSeq gene 579676 580077 . + . ID=gene-PHA56_RS02800;Name=rbfA;gbkey=Gene;gene=rbfA;gene_biotype=protein_coding;locus_tag=PHA56_RS02800;old_locus_tag=PHA56_02800 NZ_CP116214.1 Protein Homology CDS 579676 580077 . + 0 ID=cds-WP_004106092.1;Parent=gene-PHA56_RS02800;Dbxref=Genbank:WP_004106092.1;Name=WP_004106092.1;Ontology_term=GO:0006396,GO:0019843;gbkey=CDS;gene=rbfA;go_function=rRNA binding|0019843||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001712908.1;locus_tag=PHA56_RS02800;product=30S ribosome-binding factor RbfA;protein_id=WP_004106092.1;transl_table=11 NZ_CP116214.1 RefSeq gene 580077 581021 . + . ID=gene-PHA56_RS02805;Name=truB;gbkey=Gene;gene=truB;gene_biotype=protein_coding;locus_tag=PHA56_RS02805;old_locus_tag=PHA56_02805 NZ_CP116214.1 Protein Homology CDS 580077 581021 . + 0 ID=cds-WP_014839629.1;Parent=gene-PHA56_RS02805;Dbxref=Genbank:WP_014839629.1;Name=WP_014839629.1;Ontology_term=GO:0006400,GO:0004730;gbkey=CDS;gene=truB;go_function=pseudouridylate synthase activity|0004730||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004854537.1;locus_tag=PHA56_RS02805;product=tRNA pseudouridine(55) synthase TruB;protein_id=WP_014839629.1;transl_table=11 NZ_CP116214.1 RefSeq gene 581169 581438 . + . ID=gene-PHA56_RS02810;Name=rpsO;gbkey=Gene;gene=rpsO;gene_biotype=protein_coding;locus_tag=PHA56_RS02810;old_locus_tag=PHA56_02810 NZ_CP116214.1 Protein Homology CDS 581169 581438 . + 0 ID=cds-WP_002918244.1;Parent=gene-PHA56_RS02810;Dbxref=Genbank:WP_002918244.1;Name=WP_002918244.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsO;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933502.1;locus_tag=PHA56_RS02810;product=30S ribosomal protein S15;protein_id=WP_002918244.1;transl_table=11 NZ_CP116214.1 RefSeq gene 581680 583818 . + . ID=gene-PHA56_RS02815;Name=pnp;gbkey=Gene;gene=pnp;gene_biotype=protein_coding;locus_tag=PHA56_RS02815;old_locus_tag=PHA56_02815 NZ_CP116214.1 Protein Homology CDS 581680 583818 . + 0 ID=cds-WP_009651902.1;Parent=gene-PHA56_RS02815;Dbxref=Genbank:WP_009651902.1;Name=WP_009651902.1;Ontology_term=GO:0006402,GO:0004654;gbkey=CDS;gene=pnp;go_function=polyribonucleotide nucleotidyltransferase activity|0004654||IEA;go_process=mRNA catabolic process|0006402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229009.1;locus_tag=PHA56_RS02815;product=polyribonucleotide nucleotidyltransferase;protein_id=WP_009651902.1;transl_table=11 NZ_CP116214.1 RefSeq gene 583926 584810 . + . ID=gene-PHA56_RS02820;Name=nlpI;gbkey=Gene;gene=nlpI;gene_biotype=protein_coding;locus_tag=PHA56_RS02820;old_locus_tag=PHA56_02820 NZ_CP116214.1 Protein Homology CDS 583926 584810 . + 0 ID=cds-WP_004854535.1;Parent=gene-PHA56_RS02820;Dbxref=Genbank:WP_004854535.1;Name=WP_004854535.1;Ontology_term=GO:0005515;gbkey=CDS;gene=nlpI;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020802045.1;locus_tag=PHA56_RS02820;product=lipoprotein NlpI;protein_id=WP_004854535.1;transl_table=11 NZ_CP116214.1 RefSeq gene 584911 584991 . + . ID=gene-PHA56_RS02825;Name=yrbN;gbkey=Gene;gene=yrbN;gene_biotype=protein_coding;locus_tag=PHA56_RS02825;old_locus_tag=PHA56_02825 NZ_CP116214.1 Protein Homology CDS 584911 584991 . + 0 ID=cds-WP_085903200.1;Parent=gene-PHA56_RS02825;Dbxref=Genbank:WP_085903200.1;Name=WP_085903200.1;gbkey=CDS;gene=yrbN;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791258.1;locus_tag=PHA56_RS02825;product=protein YrbN;protein_id=WP_085903200.1;transl_table=11 NZ_CP116214.1 RefSeq gene 584984 586945 . + . ID=gene-PHA56_RS02830;Name=PHA56_RS02830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS02830;old_locus_tag=PHA56_02830 NZ_CP116214.1 Protein Homology CDS 584984 586945 . + 0 ID=cds-WP_014839626.1;Parent=gene-PHA56_RS02830;Dbxref=Genbank:WP_014839626.1;Name=WP_014839626.1;Ontology_term=GO:0000027,GO:0003724,GO:0005524;gbkey=CDS;go_function=RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;go_process=ribosomal large subunit assembly|0000027||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229007.1;locus_tag=PHA56_RS02830;product=DEAD/DEAH family ATP-dependent RNA helicase;protein_id=WP_014839626.1;transl_table=11 NZ_CP116214.1 RefSeq gene 587090 588334 . + . ID=gene-PHA56_RS02835;Name=mtr;gbkey=Gene;gene=mtr;gene_biotype=protein_coding;locus_tag=PHA56_RS02835;old_locus_tag=PHA56_02835 NZ_CP116214.1 Protein Homology CDS 587090 588334 . + 0 ID=cds-WP_038423732.1;Parent=gene-PHA56_RS02835;Dbxref=Genbank:WP_038423732.1;Name=WP_038423732.1;Ontology_term=GO:0015801,GO:0015173,GO:0005886;gbkey=CDS;gene=mtr;go_component=plasma membrane|0005886||IEA;go_function=aromatic amino acid transmembrane transporter activity|0015173||IEA;go_process=aromatic amino acid transport|0015801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004854531.1;locus_tag=PHA56_RS02835;product=tryptophan permease;protein_id=WP_038423732.1;transl_table=11 NZ_CP116214.1 RefSeq gene 588367 589374 . - . ID=gene-PHA56_RS02840;Name=PHA56_RS02840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS02840;old_locus_tag=PHA56_02840 NZ_CP116214.1 Protein Homology CDS 588367 589374 . - 0 ID=cds-WP_032693258.1;Parent=gene-PHA56_RS02840;Dbxref=Genbank:WP_032693258.1;Name=WP_032693258.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229005.1;locus_tag=PHA56_RS02840;product=LLM class flavin-dependent oxidoreductase;protein_id=WP_032693258.1;transl_table=11 NZ_CP116214.1 RefSeq gene 589518 590396 . - . ID=gene-PHA56_RS02845;Name=PHA56_RS02845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS02845;old_locus_tag=PHA56_02845 NZ_CP116214.1 Protein Homology CDS 589518 590396 . - 0 ID=cds-WP_032720215.1;Parent=gene-PHA56_RS02845;Dbxref=Genbank:WP_032720215.1;Name=WP_032720215.1;Ontology_term=GO:0006744;gbkey=CDS;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229004.1;locus_tag=PHA56_RS02845;product=U32 family peptidase;protein_id=WP_032720215.1;transl_table=11 NZ_CP116214.1 RefSeq gene 590405 591400 . - . ID=gene-PHA56_RS02850;Name=PHA56_RS02850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS02850;old_locus_tag=PHA56_02850 NZ_CP116214.1 Protein Homology CDS 590405 591400 . - 0 ID=cds-WP_004106058.1;Parent=gene-PHA56_RS02850;Dbxref=Genbank:WP_004106058.1;Name=WP_004106058.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017457364.1;locus_tag=PHA56_RS02850;product=peptidase U32 family protein;protein_id=WP_004106058.1;transl_table=11 NZ_CP116214.1 RefSeq gene 591622 592146 . + . ID=gene-PHA56_RS02855;Name=PHA56_RS02855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS02855;old_locus_tag=PHA56_02855 NZ_CP116214.1 Protein Homology CDS 591622 592146 . + 0 ID=cds-WP_004854523.1;Parent=gene-PHA56_RS02855;Dbxref=Genbank:WP_004854523.1;Name=WP_004854523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229002.1;locus_tag=PHA56_RS02855;product=SCP2 domain-containing protein;protein_id=WP_004854523.1;transl_table=11 NZ_CP116214.1 RefSeq gene 592140 592643 . + . ID=gene-PHA56_RS02860;Name=PHA56_RS02860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS02860;old_locus_tag=PHA56_02860 NZ_CP116214.1 Protein Homology CDS 592140 592643 . + 0 ID=cds-WP_032693256.1;Parent=gene-PHA56_RS02860;Dbxref=Genbank:WP_032693256.1;Name=WP_032693256.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020883545.1;locus_tag=PHA56_RS02860;product=N-acetyltransferase;protein_id=WP_032693256.1;transl_table=11 NZ_CP116214.1 RefSeq gene 592630 592914 . - . ID=gene-PHA56_RS02865;Name=PHA56_RS02865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS02865;old_locus_tag=PHA56_02865 NZ_CP116214.1 Protein Homology CDS 592630 592914 . - 0 ID=cds-WP_014226970.1;Parent=gene-PHA56_RS02865;Dbxref=Genbank:WP_014226970.1;Name=WP_014226970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004854522.1;locus_tag=PHA56_RS02865;product=GIY-YIG nuclease family protein;protein_id=WP_014226970.1;transl_table=11 NZ_CP116214.1 RefSeq gene 592970 593413 . + . ID=gene-PHA56_RS02870;Name=PHA56_RS02870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS02870;old_locus_tag=PHA56_02870 NZ_CP116214.1 Protein Homology CDS 592970 593413 . + 0 ID=cds-WP_014226969.1;Parent=gene-PHA56_RS02870;Dbxref=Genbank:WP_014226969.1;Name=WP_014226969.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228999.1;locus_tag=PHA56_RS02870;product=YhbP family protein;protein_id=WP_014226969.1;transl_table=11 NZ_CP116214.1 RefSeq gene 593393 593911 . - . ID=gene-PHA56_RS02875;Name=PHA56_RS02875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS02875;old_locus_tag=PHA56_02875 NZ_CP116214.1 Protein Homology CDS 593393 593911 . - 0 ID=cds-WP_004854517.1;Parent=gene-PHA56_RS02875;Dbxref=Genbank:WP_004854517.1;Name=WP_004854517.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417622.2;locus_tag=PHA56_RS02875;product=type 1 glutamine amidotransferase;protein_id=WP_004854517.1;transl_table=11 NZ_CP116214.1 RefSeq gene 594040 594690 . + . ID=gene-PHA56_RS02880;Name=PHA56_RS02880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS02880;old_locus_tag=PHA56_02880 NZ_CP116214.1 Protein Homology CDS 594040 594690 . + 0 ID=cds-WP_032693255.1;Parent=gene-PHA56_RS02880;Dbxref=Genbank:WP_032693255.1;Name=WP_032693255.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004106052.1;locus_tag=PHA56_RS02880;product=NAD(P)H-binding protein;protein_id=WP_032693255.1;transl_table=11 NZ_CP116214.1 RefSeq gene 594760 595800 . + . ID=gene-PHA56_RS02885;Name=PHA56_RS02885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS02885;old_locus_tag=PHA56_02885 NZ_CP116214.1 Protein Homology CDS 594760 595800 . + 0 ID=cds-WP_038423731.1;Parent=gene-PHA56_RS02885;Dbxref=Genbank:WP_038423731.1;Name=WP_038423731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228996.1;locus_tag=PHA56_RS02885;product=permease;protein_id=WP_038423731.1;transl_table=11 NZ_CP116214.1 RefSeq gene 595908 596483 . - . ID=gene-PHA56_RS02890;Name=dolP;gbkey=Gene;gene=dolP;gene_biotype=protein_coding;locus_tag=PHA56_RS02890;old_locus_tag=PHA56_02890 NZ_CP116214.1 Protein Homology CDS 595908 596483 . - 0 ID=cds-WP_004125578.1;Parent=gene-PHA56_RS02890;Dbxref=Genbank:WP_004125578.1;Name=WP_004125578.1;Ontology_term=GO:0006970;gbkey=CDS;gene=dolP;go_process=response to osmotic stress|0006970||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228995.1;locus_tag=PHA56_RS02890;product=division/outer membrane stress-associated lipid-binding lipoprotein;protein_id=WP_004125578.1;transl_table=11 NZ_CP116214.1 RefSeq gene 596493 597083 . - . ID=gene-PHA56_RS02895;Name=diaA;gbkey=Gene;gene=diaA;gene_biotype=protein_coding;locus_tag=PHA56_RS02895;old_locus_tag=PHA56_02895 NZ_CP116214.1 Protein Homology CDS 596493 597083 . - 0 ID=cds-WP_002918211.1;Parent=gene-PHA56_RS02895;Dbxref=Genbank:WP_002918211.1;Name=WP_002918211.1;gbkey=CDS;gene=diaA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228994.1;locus_tag=PHA56_RS02895;product=DnaA initiator-associating protein DiaA;protein_id=WP_002918211.1;transl_table=11 NZ_CP116214.1 RefSeq gene 597106 597492 . - . ID=gene-PHA56_RS02900;Name=PHA56_RS02900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS02900;old_locus_tag=PHA56_02900 NZ_CP116214.1 Protein Homology CDS 597106 597492 . - 0 ID=cds-WP_038423729.1;Parent=gene-PHA56_RS02900;Dbxref=Genbank:WP_038423729.1;Name=WP_038423729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228993.1;locus_tag=PHA56_RS02900;product=YraN family protein;protein_id=WP_038423729.1;transl_table=11 NZ_CP116214.1 RefSeq gene 597450 599531 . - . ID=gene-PHA56_RS02905;Name=PHA56_RS02905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS02905;old_locus_tag=PHA56_02905 NZ_CP116214.1 Protein Homology CDS 597450 599531 . - 0 ID=cds-WP_038423727.1;Parent=gene-PHA56_RS02905;Dbxref=Genbank:WP_038423727.1;Name=WP_038423727.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228992.1;locus_tag=PHA56_RS02905;product=penicillin-binding protein activator;protein_id=WP_038423727.1;transl_table=11 NZ_CP116214.1 RefSeq gene 599595 600455 . + . ID=gene-PHA56_RS02910;Name=rsmI;gbkey=Gene;gene=rsmI;gene_biotype=protein_coding;locus_tag=PHA56_RS02910;old_locus_tag=PHA56_02910 NZ_CP116214.1 Protein Homology CDS 599595 600455 . + 0 ID=cds-WP_009651852.1;Parent=gene-PHA56_RS02910;Dbxref=Genbank:WP_009651852.1;Name=WP_009651852.1;Ontology_term=GO:0008168;gbkey=CDS;gene=rsmI;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312054.1;locus_tag=PHA56_RS02910;product=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;protein_id=WP_009651852.1;transl_table=11 NZ_CP116214.1 RefSeq gene 600490 602379 . - . ID=gene-PHA56_RS02915;Name=PHA56_RS02915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS02915;old_locus_tag=PHA56_02915 NZ_CP116214.1 Protein Homology CDS 600490 602379 . - 0 ID=cds-WP_038423725.1;Parent=gene-PHA56_RS02915;Dbxref=Genbank:WP_038423725.1;Name=WP_038423725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003861746.1;locus_tag=PHA56_RS02915;product=enterotoxin;protein_id=WP_038423725.1;transl_table=11 NZ_CP116214.1 RefSeq gene 602472 603344 . - . ID=gene-PHA56_RS02920;Name=kbaY;gbkey=Gene;gene=kbaY;gene_biotype=protein_coding;locus_tag=PHA56_RS02920;old_locus_tag=PHA56_02920 NZ_CP116214.1 Protein Homology CDS 602472 603344 . - 0 ID=cds-WP_004125566.1;Parent=gene-PHA56_RS02920;Dbxref=Genbank:WP_004125566.1;Name=WP_004125566.1;gbkey=CDS;gene=kbaY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003861740.1;locus_tag=PHA56_RS02920;product=tagatose-bisphosphate aldolase subunit KbaY;protein_id=WP_004125566.1;transl_table=11 NZ_CP116214.1 RefSeq gene 603357 604511 . - . ID=gene-PHA56_RS02925;Name=PHA56_RS02925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS02925;old_locus_tag=PHA56_02925 NZ_CP116214.1 Protein Homology CDS 603357 604511 . - 0 ID=cds-WP_025108320.1;Parent=gene-PHA56_RS02925;Dbxref=Genbank:WP_025108320.1;Name=WP_025108320.1;Ontology_term=GO:1901135,GO:0097367;gbkey=CDS;go_function=carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417605.1;locus_tag=PHA56_RS02925;product=SIS domain-containing protein;protein_id=WP_025108320.1;transl_table=11 NZ_CP116214.1 RefSeq gene 604816 605949 . - . ID=gene-PHA56_RS02930;Name=nagA;gbkey=Gene;gene=nagA;gene_biotype=protein_coding;locus_tag=PHA56_RS02930;old_locus_tag=PHA56_02930 NZ_CP116214.1 Protein Homology CDS 604816 605949 . - 0 ID=cds-WP_038423723.1;Parent=gene-PHA56_RS02930;Dbxref=Genbank:WP_038423723.1;Name=WP_038423723.1;Ontology_term=GO:0006040,GO:0008448;gbkey=CDS;gene=nagA;go_function=N-acetylglucosamine-6-phosphate deacetylase activity|0008448||IEA;go_process=amino sugar metabolic process|0006040||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003839995.1;locus_tag=PHA56_RS02930;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=WP_038423723.1;transl_table=11 NZ_CP116214.1 RefSeq gene 605946 606380 . - . ID=gene-PHA56_RS02935;Name=agaF;gbkey=Gene;gene=agaF;gene_biotype=protein_coding;locus_tag=PHA56_RS02935;old_locus_tag=PHA56_02935 NZ_CP116214.1 Protein Homology CDS 605946 606380 . - 0 ID=cds-WP_004125557.1;Parent=gene-PHA56_RS02935;Dbxref=Genbank:WP_004125557.1;Name=WP_004125557.1;gbkey=CDS;gene=agaF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312041.1;locus_tag=PHA56_RS02935;product=PTS galactosamine/N-acetylgalactosamine transporter subunit IIA;protein_id=WP_004125557.1;transl_table=11 NZ_CP116214.1 RefSeq gene 606398 607276 . - . ID=gene-PHA56_RS02940;Name=agaE;gbkey=Gene;gene=agaE;gene_biotype=protein_coding;locus_tag=PHA56_RS02940;old_locus_tag=PHA56_02940 NZ_CP116214.1 Protein Homology CDS 606398 607276 . - 0 ID=cds-WP_004125554.1;Parent=gene-PHA56_RS02940;Dbxref=Genbank:WP_004125554.1;Name=WP_004125554.1;gbkey=CDS;gene=agaE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818163.1;locus_tag=PHA56_RS02940;product=PTS N-acetylgalactosamine transporter subunit IID;protein_id=WP_004125554.1;transl_table=11 NZ_CP116214.1 RefSeq gene 607266 608045 . - . ID=gene-PHA56_RS02945;Name=agaW;gbkey=Gene;gene=agaW;gene_biotype=protein_coding;locus_tag=PHA56_RS02945;old_locus_tag=PHA56_02945 NZ_CP116214.1 Protein Homology CDS 607266 608045 . - 0 ID=cds-WP_038423721.1;Parent=gene-PHA56_RS02945;Dbxref=Genbank:WP_038423721.1;Name=WP_038423721.1;gbkey=CDS;gene=agaW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312039.1;locus_tag=PHA56_RS02945;product=PTS N-acetylgalactosamine transporter subunit IIC;protein_id=WP_038423721.1;transl_table=11 NZ_CP116214.1 RefSeq gene 608056 608529 . - . ID=gene-PHA56_RS02950;Name=agaV;gbkey=Gene;gene=agaV;gene_biotype=protein_coding;locus_tag=PHA56_RS02950;old_locus_tag=PHA56_02950 NZ_CP116214.1 Protein Homology CDS 608056 608529 . - 0 ID=cds-WP_038423719.1;Parent=gene-PHA56_RS02950;Dbxref=Genbank:WP_038423719.1;Name=WP_038423719.1;gbkey=CDS;gene=agaV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312038.2;locus_tag=PHA56_RS02950;product=PTS N-acetylgalactosamine transporter subunit IIB;protein_id=WP_038423719.1;transl_table=11 NZ_CP116214.1 RefSeq gene 608542 609825 . - . ID=gene-PHA56_RS02955;Name=kbaZ;gbkey=Gene;gene=kbaZ;gene_biotype=protein_coding;locus_tag=PHA56_RS02955;old_locus_tag=PHA56_02955 NZ_CP116214.1 Protein Homology CDS 608542 609825 . - 0 ID=cds-WP_057173196.1;Parent=gene-PHA56_RS02955;Dbxref=Genbank:WP_057173196.1;Name=WP_057173196.1;gbkey=CDS;gene=kbaZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009651889.1;locus_tag=PHA56_RS02955;product=tagatose-bisphosphate aldolase subunit KbaZ;protein_id=WP_057173196.1;transl_table=11 NZ_CP116214.1 RefSeq gene 610094 610903 . + . ID=gene-PHA56_RS02960;Name=PHA56_RS02960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS02960;old_locus_tag=PHA56_02960 NZ_CP116214.1 Protein Homology CDS 610094 610903 . + 0 ID=cds-WP_025108325.1;Parent=gene-PHA56_RS02960;Dbxref=Genbank:WP_025108325.1;Name=WP_025108325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004125543.1;locus_tag=PHA56_RS02960;product=DeoR family transcriptional regulator;protein_id=WP_025108325.1;transl_table=11 NZ_CP116214.1 RefSeq gene 610964 612535 . - . ID=gene-PHA56_RS02965;Name=garD;gbkey=Gene;gene=garD;gene_biotype=protein_coding;locus_tag=PHA56_RS02965;old_locus_tag=PHA56_02965 NZ_CP116214.1 Protein Homology CDS 610964 612535 . - 0 ID=cds-WP_032693246.1;Parent=gene-PHA56_RS02965;Dbxref=Genbank:WP_032693246.1;Name=WP_032693246.1;Ontology_term=GO:0046392,GO:0008867;gbkey=CDS;gene=garD;go_function=galactarate dehydratase activity|0008867||IEA;go_process=galactarate catabolic process|0046392||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228976.1;locus_tag=PHA56_RS02965;product=galactarate dehydratase;protein_id=WP_032693246.1;transl_table=11 NZ_CP116214.1 RefSeq gene 613054 614388 . + . ID=gene-PHA56_RS02970;Name=garP;gbkey=Gene;gene=garP;gene_biotype=protein_coding;locus_tag=PHA56_RS02970;old_locus_tag=PHA56_02970 NZ_CP116214.1 Protein Homology CDS 613054 614388 . + 0 ID=cds-WP_014226950.1;Parent=gene-PHA56_RS02970;Dbxref=Genbank:WP_014226950.1;Name=WP_014226950.1;gbkey=CDS;gene=garP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228974.1;locus_tag=PHA56_RS02970;product=galactarate/glucarate/glycerate transporter GarP;protein_id=WP_014226950.1;transl_table=11 NZ_CP116214.1 RefSeq gene 614417 615187 . + . ID=gene-PHA56_RS02975;Name=garL;gbkey=Gene;gene=garL;gene_biotype=protein_coding;locus_tag=PHA56_RS02975;old_locus_tag=PHA56_02975 NZ_CP116214.1 Protein Homology CDS 614417 615187 . + 0 ID=cds-WP_014226949.1;Parent=gene-PHA56_RS02975;Dbxref=Genbank:WP_014226949.1;Name=WP_014226949.1;Ontology_term=GO:0019394,GO:0008672;gbkey=CDS;gene=garL;go_function=2-dehydro-3-deoxyglucarate aldolase activity|0008672||IEA;go_process=glucarate catabolic process|0019394||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312031.1;locus_tag=PHA56_RS02975;product=2-dehydro-3-deoxyglucarate aldolase;protein_id=WP_014226949.1;transl_table=11 NZ_CP116214.1 RefSeq gene 615216 616106 . + . ID=gene-PHA56_RS02980;Name=garR;gbkey=Gene;gene=garR;gene_biotype=protein_coding;locus_tag=PHA56_RS02980;old_locus_tag=PHA56_02980 NZ_CP116214.1 Protein Homology CDS 615216 616106 . + 0 ID=cds-WP_004105999.1;Parent=gene-PHA56_RS02980;Dbxref=Genbank:WP_004105999.1;Name=WP_004105999.1;Ontology_term=GO:0046487,GO:0008679;gbkey=CDS;gene=garR;go_function=2-hydroxy-3-oxopropionate reductase activity|0008679||IEA;go_process=glyoxylate metabolic process|0046487||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312030.2;locus_tag=PHA56_RS02980;product=2-hydroxy-3-oxopropionate reductase;protein_id=WP_004105999.1;transl_table=11 NZ_CP116214.1 RefSeq gene 616172 617317 . + . ID=gene-PHA56_RS02985;Name=garK;gbkey=Gene;gene=garK;gene_biotype=protein_coding;locus_tag=PHA56_RS02985;old_locus_tag=PHA56_02985 NZ_CP116214.1 Protein Homology CDS 616172 617317 . + 0 ID=cds-WP_014226948.1;Parent=gene-PHA56_RS02985;Dbxref=Genbank:WP_014226948.1;Name=WP_014226948.1;Ontology_term=GO:0031388,GO:0008887;gbkey=CDS;gene=garK;go_function=glycerate kinase activity|0008887||IEA;go_process=organic acid phosphorylation|0031388||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228971.1;locus_tag=PHA56_RS02985;product=glycerate 2-kinase;protein_id=WP_014226948.1;transl_table=11 NZ_CP116214.1 RefSeq gene 617350 617728 . + . ID=gene-PHA56_RS02990;Name=rnpB;gbkey=Gene;gene=rnpB;gene_biotype=RNase_P_RNA;locus_tag=PHA56_RS02990;old_locus_tag=PHA56_02990 NZ_CP116214.1 cmsearch RNase_P_RNA 617350 617728 . + . ID=rna-PHA56_RS02990;Parent=gene-PHA56_RS02990;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA56_RS02990;product=RNase P RNA component class A NZ_CP116214.1 cmsearch exon 617350 617728 . + . ID=exon-PHA56_RS02990-1;Parent=rna-PHA56_RS02990;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA56_RS02990;product=RNase P RNA component class A NZ_CP116214.1 RefSeq gene 618071 618481 . + . ID=gene-PHA56_RS02995;Name=PHA56_RS02995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS02995;old_locus_tag=PHA56_02995 NZ_CP116214.1 Protein Homology CDS 618071 618481 . + 0 ID=cds-WP_014226947.1;Parent=gene-PHA56_RS02995;Dbxref=Genbank:WP_014226947.1;Name=WP_014226947.1;Ontology_term=GO:0042597;gbkey=CDS;go_component=periplasmic space|0042597||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228968.1;locus_tag=PHA56_RS02995;product=Spy/CpxP family protein refolding chaperone;protein_id=WP_014226947.1;transl_table=11 NZ_CP116214.1 RefSeq gene 618515 618676 . - . ID=gene-PHA56_RS03000;Name=PHA56_RS03000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS03000;old_locus_tag=PHA56_03000 NZ_CP116214.1 Protein Homology CDS 618515 618676 . - 0 ID=cds-WP_271292956.1;Parent=gene-PHA56_RS03000;Dbxref=Genbank:WP_271292956.1;Name=WP_271292956.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226946.1;locus_tag=PHA56_RS03000;product=hypothetical protein;protein_id=WP_271292956.1;transl_table=11 NZ_CP116214.1 RefSeq gene 618701 619402 . - . ID=gene-PHA56_RS03005;Name=PHA56_RS03005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS03005;old_locus_tag=PHA56_03005 NZ_CP116214.1 Protein Homology CDS 618701 619402 . - 0 ID=cds-WP_014226945.1;Parent=gene-PHA56_RS03005;Dbxref=Genbank:WP_014226945.1;Name=WP_014226945.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228966.1;locus_tag=PHA56_RS03005;product=pirin family protein;protein_id=WP_014226945.1;transl_table=11 NZ_CP116214.1 RefSeq gene 619507 620403 . + . ID=gene-PHA56_RS03010;Name=PHA56_RS03010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS03010;old_locus_tag=PHA56_03010 NZ_CP116214.1 Protein Homology CDS 619507 620403 . + 0 ID=cds-WP_014226944.1;Parent=gene-PHA56_RS03010;Dbxref=Genbank:WP_014226944.1;Name=WP_014226944.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228965.1;locus_tag=PHA56_RS03010;product=LysR family transcriptional regulator;protein_id=WP_014226944.1;transl_table=11 NZ_CP116214.1 RefSeq gene 620440 620808 . - . ID=gene-PHA56_RS03015;Name=PHA56_RS03015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS03015;old_locus_tag=PHA56_03015 NZ_CP116214.1 Protein Homology CDS 620440 620808 . - 0 ID=cds-WP_004105984.1;Parent=gene-PHA56_RS03015;Dbxref=Genbank:WP_004105984.1;Name=WP_004105984.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228964.1;locus_tag=PHA56_RS03015;product=DUF805 domain-containing protein;protein_id=WP_004105984.1;transl_table=11 NZ_CP116214.1 RefSeq gene 620935 621921 . - . ID=gene-PHA56_RS03020;Name=PHA56_RS03020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS03020;old_locus_tag=PHA56_03020 NZ_CP116214.1 Protein Homology CDS 620935 621921 . - 0 ID=cds-WP_032693245.1;Parent=gene-PHA56_RS03020;Dbxref=Genbank:WP_032693245.1;Name=WP_032693245.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228963.1;locus_tag=PHA56_RS03020;product=glutathione S-transferase family protein;protein_id=WP_032693245.1;transl_table=11 NZ_CP116214.1 RefSeq gene 621991 622383 . - . ID=gene-PHA56_RS03025;Name=PHA56_RS03025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS03025;old_locus_tag=PHA56_03025 NZ_CP116214.1 Protein Homology CDS 621991 622383 . - 0 ID=cds-WP_004125512.1;Parent=gene-PHA56_RS03025;Dbxref=Genbank:WP_004125512.1;Name=WP_004125512.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008503138.1;locus_tag=PHA56_RS03025;product=DoxX family protein;protein_id=WP_004125512.1;transl_table=11 NZ_CP116214.1 RefSeq gene 622728 623027 . - . ID=gene-PHA56_RS03030;Name=PHA56_RS03030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS03030;old_locus_tag=PHA56_03030 NZ_CP116214.1 Protein Homology CDS 622728 623027 . - 0 ID=cds-WP_014226942.1;Parent=gene-PHA56_RS03030;Dbxref=Genbank:WP_014226942.1;Name=WP_014226942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004115736.1;locus_tag=PHA56_RS03030;product=YqjK-like family protein;protein_id=WP_014226942.1;transl_table=11 NZ_CP116214.1 RefSeq gene 623024 623422 . - . ID=gene-PHA56_RS03035;Name=PHA56_RS03035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS03035;old_locus_tag=PHA56_03035 NZ_CP116214.1 Protein Homology CDS 623024 623422 . - 0 ID=cds-WP_004854455.1;Parent=gene-PHA56_RS03035;Dbxref=Genbank:WP_004854455.1;Name=WP_004854455.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004854455.1;locus_tag=PHA56_RS03035;product=phage holin family protein;protein_id=WP_004854455.1;transl_table=11 NZ_CP116214.1 RefSeq gene 623425 623730 . - . ID=gene-PHA56_RS03040;Name=PHA56_RS03040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS03040;old_locus_tag=PHA56_03040 NZ_CP116214.1 Protein Homology CDS 623425 623730 . - 0 ID=cds-WP_014226940.1;Parent=gene-PHA56_RS03040;Dbxref=Genbank:WP_014226940.1;Name=WP_014226940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228959.1;locus_tag=PHA56_RS03040;product=YqjD family protein;protein_id=WP_014226940.1;transl_table=11 NZ_CP116214.1 RefSeq gene 623776 624144 . - . ID=gene-PHA56_RS03045;Name=PHA56_RS03045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS03045;old_locus_tag=PHA56_03045 NZ_CP116214.1 Protein Homology CDS 623776 624144 . - 0 ID=cds-WP_014226939.1;Parent=gene-PHA56_RS03045;Dbxref=Genbank:WP_014226939.1;Name=WP_014226939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228958.1;locus_tag=PHA56_RS03045;product=DUF1090 domain-containing protein;protein_id=WP_014226939.1;transl_table=11 NZ_CP116214.1 RefSeq gene 624294 624671 . - . ID=gene-PHA56_RS03050;Name=mzrA;gbkey=Gene;gene=mzrA;gene_biotype=protein_coding;locus_tag=PHA56_RS03050;old_locus_tag=PHA56_03050 NZ_CP116214.1 Protein Homology CDS 624294 624671 . - 0 ID=cds-WP_161506366.1;Parent=gene-PHA56_RS03050;Dbxref=Genbank:WP_161506366.1;Name=WP_161506366.1;gbkey=CDS;gene=mzrA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228957.1;locus_tag=PHA56_RS03050;product=EnvZ/OmpR regulon moderator MzrA;protein_id=WP_161506366.1;transl_table=11 NZ_CP116214.1 RefSeq gene 624680 625342 . - . ID=gene-PHA56_RS03055;Name=PHA56_RS03055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS03055;old_locus_tag=PHA56_03055 NZ_CP116214.1 Protein Homology CDS 624680 625342 . - 0 ID=cds-WP_014226938.1;Parent=gene-PHA56_RS03055;Dbxref=Genbank:WP_014226938.1;Name=WP_014226938.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228956.1;locus_tag=PHA56_RS03055;product=DedA family general envelope maintenance protein YqjA;protein_id=WP_014226938.1;transl_table=11 NZ_CP116214.1 RefSeq gene 625679 626455 . - . ID=gene-PHA56_RS03060;Name=exuR;gbkey=Gene;gene=exuR;gene_biotype=protein_coding;locus_tag=PHA56_RS03060;old_locus_tag=PHA56_03060 NZ_CP116214.1 Protein Homology CDS 625679 626455 . - 0 ID=cds-WP_004854448.1;Parent=gene-PHA56_RS03060;Dbxref=Genbank:WP_004854448.1;Name=WP_004854448.1;gbkey=CDS;gene=exuR;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228955.1;locus_tag=PHA56_RS03060;product=transcriptional regulator ExuR;protein_id=WP_004854448.1;transl_table=11 NZ_CP116214.1 RefSeq gene 626583 627884 . - . ID=gene-PHA56_RS03065;Name=PHA56_RS03065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS03065;old_locus_tag=PHA56_03065 NZ_CP116214.1 Protein Homology CDS 626583 627884 . - 0 ID=cds-WP_032693243.1;Parent=gene-PHA56_RS03065;Dbxref=Genbank:WP_032693243.1;Name=WP_032693243.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228954.1;locus_tag=PHA56_RS03065;product=MFS transporter;protein_id=WP_032693243.1;transl_table=11 NZ_CP116214.1 RefSeq gene 628366 629778 . + . ID=gene-PHA56_RS03070;Name=uxaC;gbkey=Gene;gene=uxaC;gene_biotype=protein_coding;locus_tag=PHA56_RS03070;old_locus_tag=PHA56_03070 NZ_CP116214.1 Protein Homology CDS 628366 629778 . + 0 ID=cds-WP_038423714.1;Parent=gene-PHA56_RS03070;Dbxref=Genbank:WP_038423714.1;Name=WP_038423714.1;Ontology_term=GO:0006064,GO:0008880;gbkey=CDS;gene=uxaC;go_function=glucuronate isomerase activity|0008880||IEA;go_process=glucuronate catabolic process|0006064||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019077755.1;locus_tag=PHA56_RS03070;product=glucuronate isomerase;protein_id=WP_038423714.1;transl_table=11 NZ_CP116214.1 RefSeq gene 629797 631284 . + . ID=gene-PHA56_RS03075;Name=PHA56_RS03075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS03075;old_locus_tag=PHA56_03075 NZ_CP116214.1 Protein Homology CDS 629797 631284 . + 0 ID=cds-WP_014226935.1;Parent=gene-PHA56_RS03075;Dbxref=Genbank:WP_014226935.1;Name=WP_014226935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001199350.1;locus_tag=PHA56_RS03075;product=altronate dehydratase family protein;protein_id=WP_014226935.1;transl_table=11 NZ_CP116214.1 RefSeq gene 631529 632083 . + . ID=gene-PHA56_RS03080;Name=PHA56_RS03080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS03080;old_locus_tag=PHA56_03080 NZ_CP116214.1 Protein Homology CDS 631529 632083 . + 0 ID=cds-WP_038423712.1;Parent=gene-PHA56_RS03080;Dbxref=Genbank:WP_038423712.1;Name=WP_038423712.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228951.1;locus_tag=PHA56_RS03080;product=YgjV family protein;protein_id=WP_038423712.1;transl_table=11 NZ_CP116214.1 RefSeq gene 632102 633349 . - . ID=gene-PHA56_RS03085;Name=sstT;gbkey=Gene;gene=sstT;gene_biotype=protein_coding;locus_tag=PHA56_RS03085;old_locus_tag=PHA56_03085 NZ_CP116214.1 Protein Homology CDS 632102 633349 . - 0 ID=cds-WP_038423706.1;Parent=gene-PHA56_RS03085;Dbxref=Genbank:WP_038423706.1;Name=WP_038423706.1;Ontology_term=GO:0015826,GO:0032329,GO:0015293,GO:0016020;gbkey=CDS;gene=sstT;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=threonine transport|0015826||IEA,serine transport|0032329||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014839615.1;locus_tag=PHA56_RS03085;product=serine/threonine transporter SstT;protein_id=WP_038423706.1;transl_table=11 NZ_CP116214.1 RefSeq gene 633604 634572 . - . ID=gene-PHA56_RS03090;Name=PHA56_RS03090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS03090;old_locus_tag=PHA56_03090 NZ_CP116214.1 Protein Homology CDS 633604 634572 . - 0 ID=cds-WP_014839614.1;Parent=gene-PHA56_RS03090;Dbxref=Genbank:WP_014839614.1;Name=WP_014839614.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014839614.1;locus_tag=PHA56_RS03090;product=TerC family protein;protein_id=WP_014839614.1;transl_table=11 NZ_CP116214.1 RefSeq gene 634823 635812 . - . ID=gene-PHA56_RS03095;Name=PHA56_RS03095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS03095;old_locus_tag=PHA56_03095 NZ_CP116214.1 Protein Homology CDS 634823 635812 . - 0 ID=cds-WP_038423704.1;Parent=gene-PHA56_RS03095;Dbxref=Genbank:WP_038423704.1;Name=WP_038423704.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228948.1;locus_tag=PHA56_RS03095;product=Gfo/Idh/MocA family oxidoreductase;protein_id=WP_038423704.1;transl_table=11 NZ_CP116214.1 RefSeq gene 635882 636385 . - . ID=gene-PHA56_RS03100;Name=PHA56_RS03100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS03100;old_locus_tag=PHA56_03100 NZ_CP116214.1 Protein Homology CDS 635882 636385 . - 0 ID=cds-WP_014226931.1;Parent=gene-PHA56_RS03100;Dbxref=Genbank:WP_014226931.1;Name=WP_014226931.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004135921.1;locus_tag=PHA56_RS03100;product=M48 family metallopeptidase;protein_id=WP_014226931.1;transl_table=11 NZ_CP116214.1 RefSeq gene 636464 638107 . - . ID=gene-PHA56_RS03105;Name=PHA56_RS03105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS03105;old_locus_tag=PHA56_03105 NZ_CP116214.1 Protein Homology CDS 636464 638107 . - 0 ID=cds-WP_038423703.1;Parent=gene-PHA56_RS03105;Dbxref=Genbank:WP_038423703.1;Name=WP_038423703.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012967192.1;locus_tag=PHA56_RS03105;product=glycoside hydrolase family 43 protein;protein_id=WP_038423703.1;transl_table=11 NZ_CP116214.1 RefSeq gene 638236 639102 . - . ID=gene-PHA56_RS03110;Name=PHA56_RS03110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS03110;old_locus_tag=PHA56_03110 NZ_CP116214.1 Protein Homology CDS 638236 639102 . - 0 ID=cds-WP_038423701.1;Parent=gene-PHA56_RS03110;Dbxref=Genbank:WP_038423701.1;Name=WP_038423701.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004115708.1;locus_tag=PHA56_RS03110;product=AraC family transcriptional regulator;protein_id=WP_038423701.1;transl_table=11 NZ_CP116214.1 RefSeq gene 639210 640553 . + . ID=gene-PHA56_RS03115;Name=PHA56_RS03115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS03115;old_locus_tag=PHA56_03115 NZ_CP116214.1 Protein Homology CDS 639210 640553 . + 0 ID=cds-WP_004854424.1;Parent=gene-PHA56_RS03115;Dbxref=Genbank:WP_004854424.1;Name=WP_004854424.1;Ontology_term=GO:0006812,GO:0008643,GO:0015486,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=glycoside-pentoside-hexuronide:cation symporter activity|0015486||IEA;go_process=monoatomic cation transport|0006812||IEA,carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004854424.1;locus_tag=PHA56_RS03115;product=glycoside-pentoside-hexuronide (GPH):cation symporter;protein_id=WP_004854424.1;transl_table=11 NZ_CP116214.1 RefSeq gene 640658 641788 . + . ID=gene-PHA56_RS03120;Name=rlmG;gbkey=Gene;gene=rlmG;gene_biotype=protein_coding;locus_tag=PHA56_RS03120;old_locus_tag=PHA56_03120 NZ_CP116214.1 Protein Homology CDS 640658 641788 . + 0 ID=cds-WP_014839608.1;Parent=gene-PHA56_RS03120;Dbxref=Genbank:WP_014839608.1;Name=WP_014839608.1;Ontology_term=GO:0031167,GO:0003676,GO:0008990;gbkey=CDS;gene=rlmG;go_function=nucleic acid binding|0003676||IEA,rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228944.1;locus_tag=PHA56_RS03120;product=23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG;protein_id=WP_014839608.1;transl_table=11 NZ_CP116214.1 RefSeq gene 641911 643932 . - . ID=gene-PHA56_RS03125;Name=PHA56_RS03125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS03125;old_locus_tag=PHA56_03125 NZ_CP116214.1 Protein Homology CDS 641911 643932 . - 0 ID=cds-WP_038423698.1;Parent=gene-PHA56_RS03125;Dbxref=Genbank:WP_038423698.1;Name=WP_038423698.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228943.1;locus_tag=PHA56_RS03125;product=NADPH-dependent 2%2C4-dienoyl-CoA reductase;protein_id=WP_038423698.1;transl_table=11 NZ_CP116214.1 RefSeq gene 644156 645748 . - . ID=gene-PHA56_RS03130;Name=lsrK;gbkey=Gene;gene=lsrK;gene_biotype=protein_coding;locus_tag=PHA56_RS03130;old_locus_tag=PHA56_03130 NZ_CP116214.1 Protein Homology CDS 644156 645748 . - 0 ID=cds-WP_038423696.1;Parent=gene-PHA56_RS03130;Dbxref=Genbank:WP_038423696.1;Name=WP_038423696.1;Ontology_term=GO:0005975,GO:0009372,GO:0071518;gbkey=CDS;gene=lsrK;go_function=autoinducer-2 kinase activity|0071518||IEA;go_process=carbohydrate metabolic process|0005975||IEA,quorum sensing|0009372||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014839606.1;locus_tag=PHA56_RS03130;product=autoinducer-2 kinase;protein_id=WP_038423696.1;transl_table=11 NZ_CP116214.1 RefSeq gene 645786 646757 . - . ID=gene-PHA56_RS03135;Name=lsrR;gbkey=Gene;gene=lsrR;gene_biotype=protein_coding;locus_tag=PHA56_RS03135;old_locus_tag=PHA56_03135 NZ_CP116214.1 Protein Homology CDS 645786 646757 . - 0 ID=cds-WP_004105944.1;Parent=gene-PHA56_RS03135;Dbxref=Genbank:WP_004105944.1;Name=WP_004105944.1;gbkey=CDS;gene=lsrR;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228941.1;locus_tag=PHA56_RS03135;product=transcriptional regulator LsrR;protein_id=WP_004105944.1;transl_table=11 NZ_CP116214.1 RefSeq gene 646977 648464 . + . ID=gene-PHA56_RS03140;Name=lsrA;gbkey=Gene;gene=lsrA;gene_biotype=protein_coding;locus_tag=PHA56_RS03140;old_locus_tag=PHA56_03140 NZ_CP116214.1 Protein Homology CDS 646977 648464 . + 0 ID=cds-WP_038424922.1;Parent=gene-PHA56_RS03140;Dbxref=Genbank:WP_038424922.1;Name=WP_038424922.1;Ontology_term=GO:1905887,GO:0005524,GO:0042626,GO:0016020;gbkey=CDS;gene=lsrA;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=autoinducer AI-2 transmembrane transport|1905887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228940.1;locus_tag=PHA56_RS03140;product=autoinducer 2 ABC transporter ATP-binding protein LsrA;protein_id=WP_038424922.1;transl_table=11 NZ_CP116214.1 RefSeq gene 648461 649495 . + . ID=gene-PHA56_RS03145;Name=lsrC;gbkey=Gene;gene=lsrC;gene_biotype=protein_coding;locus_tag=PHA56_RS03145;old_locus_tag=PHA56_03145 NZ_CP116214.1 Protein Homology CDS 648461 649495 . + 0 ID=cds-WP_014226924.1;Parent=gene-PHA56_RS03145;Dbxref=Genbank:WP_014226924.1;Name=WP_014226924.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=lsrC;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228939.1;locus_tag=PHA56_RS03145;product=autoinducer 2 ABC transporter permease LsrC;protein_id=WP_014226924.1;transl_table=11 NZ_CP116214.1 RefSeq gene 649496 650488 . + . ID=gene-PHA56_RS03150;Name=PHA56_RS03150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS03150;old_locus_tag=PHA56_03150 NZ_CP116214.1 Protein Homology CDS 649496 650488 . + 0 ID=cds-WP_014226923.1;Parent=gene-PHA56_RS03150;Dbxref=Genbank:WP_014226923.1;Name=WP_014226923.1;Note=with IsrABC is involved with autoinducer 2 import;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004854413.1;locus_tag=PHA56_RS03150;product=histidine kinase;protein_id=WP_014226923.1;transl_table=11 NZ_CP116214.1 RefSeq gene 650490 651491 . + . ID=gene-PHA56_RS03155;Name=lsrB;gbkey=Gene;gene=lsrB;gene_biotype=protein_coding;locus_tag=PHA56_RS03155;old_locus_tag=PHA56_03155 NZ_CP116214.1 Protein Homology CDS 650490 651491 . + 0 ID=cds-WP_032693233.1;Parent=gene-PHA56_RS03155;Dbxref=Genbank:WP_032693233.1;Name=WP_032693233.1;gbkey=CDS;gene=lsrB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228937.1;locus_tag=PHA56_RS03155;product=autoinducer 2 ABC transporter substrate-binding protein LsrB;protein_id=WP_032693233.1;transl_table=11 NZ_CP116214.1 RefSeq gene 651503 652390 . + . ID=gene-PHA56_RS03160;Name=lsrF;gbkey=Gene;gene=lsrF;gene_biotype=protein_coding;locus_tag=PHA56_RS03160;old_locus_tag=PHA56_03160 NZ_CP116214.1 Protein Homology CDS 651503 652390 . + 0 ID=cds-WP_038423694.1;Parent=gene-PHA56_RS03160;Dbxref=Genbank:WP_038423694.1;Name=WP_038423694.1;Ontology_term=GO:0016829;gbkey=CDS;gene=lsrF;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228936.1;locus_tag=PHA56_RS03160;product=3-hydroxy-5-phosphonooxypentane-2%2C4-dione thiolase;protein_id=WP_038423694.1;transl_table=11 NZ_CP116214.1 RefSeq gene 652387 652683 . + . ID=gene-PHA56_RS03165;Name=lsrG;gbkey=Gene;gene=lsrG;gene_biotype=protein_coding;locus_tag=PHA56_RS03165;old_locus_tag=PHA56_03165 NZ_CP116214.1 Protein Homology CDS 652387 652683 . + 0 ID=cds-WP_032693232.1;Parent=gene-PHA56_RS03165;Dbxref=Genbank:WP_032693232.1;Name=WP_032693232.1;gbkey=CDS;gene=lsrG;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228935.1;locus_tag=PHA56_RS03165;product=(4S)-4-hydroxy-5-phosphonooxypentane-2%2C3-dione isomerase;protein_id=WP_032693232.1;transl_table=11 NZ_CP116214.1 RefSeq gene 652723 655071 . - . ID=gene-PHA56_RS03170;Name=ygjK;gbkey=Gene;gene=ygjK;gene_biotype=protein_coding;locus_tag=PHA56_RS03170;old_locus_tag=PHA56_03170 NZ_CP116214.1 Protein Homology CDS 652723 655071 . - 0 ID=cds-WP_038423692.1;Parent=gene-PHA56_RS03170;Dbxref=Genbank:WP_038423692.1;Name=WP_038423692.1;Ontology_term=GO:0005991,GO:0004555;gbkey=CDS;gene=ygjK;go_function=alpha%2Calpha-trehalase activity|0004555||IEA;go_process=trehalose metabolic process|0005991||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004854406.1;locus_tag=PHA56_RS03170;product=alpha-glucosidase;protein_id=WP_038423692.1;transl_table=11 NZ_CP116214.1 RefSeq gene 655089 656147 . - . ID=gene-PHA56_RS03175;Name=ygjJ;gbkey=Gene;gene=ygjJ;gene_biotype=protein_coding;locus_tag=PHA56_RS03175;old_locus_tag=PHA56_03175 NZ_CP116214.1 Protein Homology CDS 655089 656147 . - 0 ID=cds-WP_038423690.1;Parent=gene-PHA56_RS03175;Dbxref=Genbank:WP_038423690.1;Name=WP_038423690.1;gbkey=CDS;gene=ygjJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004900787.1;locus_tag=PHA56_RS03175;product=protein YgjJ;protein_id=WP_038423690.1;transl_table=11 NZ_CP116214.1 RefSeq gene 656194 657627 . - . ID=gene-PHA56_RS03180;Name=PHA56_RS03180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS03180;old_locus_tag=PHA56_03180 NZ_CP116214.1 Protein Homology CDS 656194 657627 . - 0 ID=cds-WP_038423688.1;Parent=gene-PHA56_RS03180;Dbxref=Genbank:WP_038423688.1;Name=WP_038423688.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226914.1;locus_tag=PHA56_RS03180;product=amino acid permease;protein_id=WP_038423688.1;transl_table=11 NZ_CP116214.1 RefSeq gene 657856 659289 . - . ID=gene-PHA56_RS03185;Name=PHA56_RS03185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS03185;old_locus_tag=PHA56_03185 NZ_CP116214.1 Protein Homology CDS 657856 659289 . - 0 ID=cds-WP_014226913.1;Parent=gene-PHA56_RS03185;Dbxref=Genbank:WP_014226913.1;Name=WP_014226913.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009651868.1;locus_tag=PHA56_RS03185;product=amino acid permease;protein_id=WP_014226913.1;transl_table=11 NZ_CP116214.1 RefSeq gene 659383 659832 . - . ID=gene-PHA56_RS03190;Name=PHA56_RS03190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS03190;old_locus_tag=PHA56_03190 NZ_CP116214.1 Protein Homology CDS 659383 659832 . - 0 ID=cds-WP_014226912.1;Parent=gene-PHA56_RS03190;Dbxref=Genbank:WP_014226912.1;Name=WP_014226912.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417548.1;locus_tag=PHA56_RS03190;product=beta-galactosidase subunit beta;protein_id=WP_014226912.1;transl_table=11 NZ_CP116214.1 RefSeq gene 659829 662921 . - . ID=gene-PHA56_RS03195;Name=ebgA;gbkey=Gene;gene=ebgA;gene_biotype=protein_coding;locus_tag=PHA56_RS03195;old_locus_tag=PHA56_03195 NZ_CP116214.1 Protein Homology CDS 659829 662921 . - 0 ID=cds-WP_038423686.1;Parent=gene-PHA56_RS03195;Dbxref=Genbank:WP_038423686.1;Name=WP_038423686.1;Ontology_term=GO:0004565;gbkey=CDS;gene=ebgA;go_function=beta-galactosidase activity|0004565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026199.1;locus_tag=PHA56_RS03195;product=beta-galactosidase subunit alpha;protein_id=WP_038423686.1;transl_table=11 NZ_CP116214.1 RefSeq gene 663679 664662 . - . ID=gene-PHA56_RS03200;Name=ebgR;gbkey=Gene;gene=ebgR;gene_biotype=protein_coding;locus_tag=PHA56_RS03200;old_locus_tag=PHA56_03200 NZ_CP116214.1 Protein Homology CDS 663679 664662 . - 0 ID=cds-WP_032720237.1;Parent=gene-PHA56_RS03200;Dbxref=Genbank:WP_032720237.1;Name=WP_032720237.1;gbkey=CDS;gene=ebgR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417546.1;locus_tag=PHA56_RS03200;product=transcriptional regulator EbgR;protein_id=WP_032720237.1;transl_table=11 NZ_CP116214.1 RefSeq gene 664882 665214 . + . ID=gene-PHA56_RS03205;Name=PHA56_RS03205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS03205;old_locus_tag=PHA56_03205 NZ_CP116214.1 Protein Homology CDS 664882 665214 . + 0 ID=cds-WP_014226909.1;Parent=gene-PHA56_RS03205;Dbxref=Genbank:WP_014226909.1;Name=WP_014226909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417545.1;locus_tag=PHA56_RS03205;product=tRNA-binding protein;protein_id=WP_014226909.1;transl_table=11 NZ_CP116214.1 RefSeq gene 665252 666631 . - . ID=gene-PHA56_RS03210;Name=ygjG;gbkey=Gene;gene=ygjG;gene_biotype=protein_coding;locus_tag=PHA56_RS03210;old_locus_tag=PHA56_03210 NZ_CP116214.1 Protein Homology CDS 665252 666631 . - 0 ID=cds-WP_004854393.1;Parent=gene-PHA56_RS03210;Dbxref=Genbank:WP_004854393.1;Name=WP_004854393.1;Ontology_term=GO:0009447,GO:0033094;gbkey=CDS;gene=ygjG;go_function=butane-1%2C4-diamine:2-oxoglutarate aminotransferase activity|0033094||IEA;go_process=putrescine catabolic process|0009447||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228934.1;locus_tag=PHA56_RS03210;product=putrescine aminotransferase;protein_id=WP_004854393.1;transl_table=11 NZ_CP116214.1 RefSeq gene 666872 667426 . - . ID=gene-PHA56_RS03215;Name=PHA56_RS03215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS03215;old_locus_tag=PHA56_03215 NZ_CP116214.1 Protein Homology CDS 666872 667426 . - 0 ID=cds-WP_004854392.1;Parent=gene-PHA56_RS03215;Dbxref=Genbank:WP_004854392.1;Name=WP_004854392.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228933.1;locus_tag=PHA56_RS03215;product=PadR family transcriptional regulator;protein_id=WP_004854392.1;transl_table=11 NZ_CP116214.1 RefSeq gene 667665 668438 . + . ID=gene-PHA56_RS03220;Name=PHA56_RS03220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS03220;old_locus_tag=PHA56_03220 NZ_CP116214.1 Protein Homology CDS 667665 668438 . + 0 ID=cds-WP_032720239.1;Parent=gene-PHA56_RS03220;Dbxref=Genbank:WP_032720239.1;Name=WP_032720239.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002917716.1;locus_tag=PHA56_RS03220;product=siderophore-interacting protein;protein_id=WP_032720239.1;transl_table=11 NZ_CP116214.1 RefSeq gene 668902 670551 . - . ID=gene-PHA56_RS03225;Name=PHA56_RS03225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS03225;old_locus_tag=PHA56_03225 NZ_CP116214.1 Protein Homology CDS 668902 670551 . - 0 ID=cds-WP_014839591.1;Parent=gene-PHA56_RS03225;Dbxref=Genbank:WP_014839591.1;Name=WP_014839591.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228930.1;locus_tag=PHA56_RS03225;product=glycerone kinase;protein_id=WP_014839591.1;transl_table=11 NZ_CP116214.1 RefSeq gene 670619 672037 . - . ID=gene-PHA56_RS03230;Name=dhaM;gbkey=Gene;gene=dhaM;gene_biotype=protein_coding;locus_tag=PHA56_RS03230;old_locus_tag=PHA56_03230 NZ_CP116214.1 Protein Homology CDS 670619 672037 . - 0 ID=cds-WP_119834408.1;Parent=gene-PHA56_RS03230;Dbxref=Genbank:WP_119834408.1;Name=WP_119834408.1;Ontology_term=GO:0009401,GO:0016310,GO:0019563,GO:0047324,GO:0016020;gbkey=CDS;gene=dhaM;go_component=membrane|0016020||IEA;go_function=phosphoenolpyruvate-glycerone phosphotransferase activity|0047324||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA,glycerol catabolic process|0019563||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004854383.1;locus_tag=PHA56_RS03230;product=dihydroxyacetone kinase phosphoryl donor subunit DhaM;protein_id=WP_119834408.1;transl_table=11 NZ_CP116214.1 RefSeq gene 672048 672680 . - . ID=gene-PHA56_RS03235;Name=dhaL;gbkey=Gene;gene=dhaL;gene_biotype=protein_coding;locus_tag=PHA56_RS03235;old_locus_tag=PHA56_03235 NZ_CP116214.1 Protein Homology CDS 672048 672680 . - 0 ID=cds-WP_014226902.1;Parent=gene-PHA56_RS03235;Dbxref=Genbank:WP_014226902.1;Name=WP_014226902.1;Ontology_term=GO:0006071,GO:0004371;gbkey=CDS;gene=dhaL;go_function=glycerone kinase activity|0004371||IEA;go_process=glycerol metabolic process|0006071||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228928.1;locus_tag=PHA56_RS03235;product=dihydroxyacetone kinase subunit DhaL;protein_id=WP_014226902.1;transl_table=11 NZ_CP116214.1 RefSeq gene 672692 673762 . - . ID=gene-PHA56_RS03240;Name=dhaK;gbkey=Gene;gene=dhaK;gene_biotype=protein_coding;locus_tag=PHA56_RS03240;old_locus_tag=PHA56_03240 NZ_CP116214.1 Protein Homology CDS 672692 673762 . - 0 ID=cds-WP_009651831.1;Parent=gene-PHA56_RS03240;Dbxref=Genbank:WP_009651831.1;Name=WP_009651831.1;Ontology_term=GO:0006071,GO:0004371;gbkey=CDS;gene=dhaK;go_function=glycerone kinase activity|0004371||IEA;go_process=glycerol metabolic process|0006071||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415718.6;locus_tag=PHA56_RS03240;product=dihydroxyacetone kinase subunit DhaK;protein_id=WP_009651831.1;transl_table=11 NZ_CP116214.1 RefSeq gene 674359 675456 . + . ID=gene-PHA56_RS03245;Name=PHA56_RS03245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS03245;old_locus_tag=PHA56_03245 NZ_CP116214.1 Protein Homology CDS 674359 675456 . + 0 ID=cds-WP_009651847.1;Parent=gene-PHA56_RS03245;Dbxref=Genbank:WP_009651847.1;Name=WP_009651847.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228925.1;locus_tag=PHA56_RS03245;product=glycerol dehydrogenase;protein_id=WP_009651847.1;transl_table=11 NZ_CP116214.1 RefSeq gene 675561 677474 . + . ID=gene-PHA56_RS03250;Name=dhaR;gbkey=Gene;gene=dhaR;gene_biotype=protein_coding;locus_tag=PHA56_RS03250;old_locus_tag=PHA56_03250 NZ_CP116214.1 Protein Homology CDS 675561 677474 . + 0 ID=cds-WP_119834407.1;Parent=gene-PHA56_RS03250;Dbxref=Genbank:WP_119834407.1;Name=WP_119834407.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134,GO:0043565;gbkey=CDS;gene=dhaR;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004125399.1;locus_tag=PHA56_RS03250;product=dihydroxyacetone kinase operon transcriptional regulator DhaR;protein_id=WP_119834407.1;transl_table=11 NZ_CP116214.1 RefSeq gene 677614 677937 . + . ID=gene-PHA56_RS03255;Name=PHA56_RS03255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS03255;old_locus_tag=PHA56_03255 NZ_CP116214.1 Protein Homology CDS 677614 677937 . + 0 ID=cds-WP_071886345.1;Parent=gene-PHA56_RS03255;Dbxref=Genbank:WP_071886345.1;Name=WP_071886345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459322.1;locus_tag=PHA56_RS03255;product=DUF1889 family protein;protein_id=WP_071886345.1;transl_table=11 NZ_CP116214.1 RefSeq gene 678071 679191 . - . ID=gene-PHA56_RS03260;Name=PHA56_RS03260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS03260;old_locus_tag=PHA56_03260 NZ_CP116214.1 Protein Homology CDS 678933 679191 . - 0 ID=cds-WP_085956072.1;Parent=gene-PHA56_RS03260;Dbxref=Genbank:WP_085956072.1;Name=WP_085956072.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611473.1;locus_tag=PHA56_RS03260;product=IS3-like element ISKpn34 family transposase;protein_id=WP_085956072.1;transl_table=11 NZ_CP116214.1 Protein Homology CDS 678071 678933 . - 2 ID=cds-WP_085956072.1;Parent=gene-PHA56_RS03260;Dbxref=Genbank:WP_085956072.1;Name=WP_085956072.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611473.1;locus_tag=PHA56_RS03260;product=IS3-like element ISKpn34 family transposase;protein_id=WP_085956072.1;transl_table=11 NZ_CP116214.1 RefSeq gene 679283 679690 . + . ID=gene-PHA56_RS03265;Name=PHA56_RS03265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS03265;old_locus_tag=PHA56_03265 NZ_CP116214.1 Protein Homology CDS 679283 679690 . + 0 ID=cds-WP_042928425.1;Parent=gene-PHA56_RS03265;Dbxref=Genbank:WP_042928425.1;Name=WP_042928425.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000708197.1;locus_tag=PHA56_RS03265;product=DUF6375 family protein;protein_id=WP_042928425.1;transl_table=11 NZ_CP116214.1 RefSeq gene 679705 683763 . + . ID=gene-PHA56_RS03270;Name=PHA56_RS03270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS03270;old_locus_tag=PHA56_03270 NZ_CP116214.1 Protein Homology CDS 679705 683763 . + 0 ID=cds-WP_119834394.1;Parent=gene-PHA56_RS03270;Dbxref=Genbank:WP_119834394.1;Name=WP_119834394.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009654281.1;locus_tag=PHA56_RS03270;product=hypothetical protein;protein_id=WP_119834394.1;transl_table=11 NZ_CP116214.1 RefSeq gene 684287 685515 . - . ID=gene-PHA56_RS03275;Name=PHA56_RS03275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS03275;old_locus_tag=PHA56_03275 NZ_CP116214.1 Protein Homology CDS 685200 685515 . - 0 ID=cds-WP_104159316.1;Parent=gene-PHA56_RS03275;Dbxref=Genbank:WP_104159316.1;Name=WP_104159316.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558215.1;locus_tag=PHA56_RS03275;product=IS3 family transposase;protein_id=WP_104159316.1;transl_table=11 NZ_CP116214.1 Protein Homology CDS 684287 685200 . - 2 ID=cds-WP_104159316.1;Parent=gene-PHA56_RS03275;Dbxref=Genbank:WP_104159316.1;Name=WP_104159316.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558215.1;locus_tag=PHA56_RS03275;product=IS3 family transposase;protein_id=WP_104159316.1;transl_table=11 NZ_CP116214.1 RefSeq pseudogene 685614 686387 . + . ID=gene-PHA56_RS03280;Name=PHA56_RS03280;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS03280;old_locus_tag=PHA56_03280;partial=true;pseudo=true;start_range=.,685614 NZ_CP116214.1 Protein Homology CDS 685614 686387 . + 0 ID=cds-PHA56_RS03280;Parent=gene-PHA56_RS03280;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000165430.1;locus_tag=PHA56_RS03280;partial=true;product=GTPase family protein;pseudo=true;start_range=.,685614;transl_table=11 NZ_CP116214.1 RefSeq gene 686588 687292 . + . ID=gene-PHA56_RS03285;Name=PHA56_RS03285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS03285;old_locus_tag=PHA56_03285 NZ_CP116214.1 Protein Homology CDS 686588 687292 . + 0 ID=cds-WP_119834393.1;Parent=gene-PHA56_RS03285;Dbxref=Genbank:WP_119834393.1;Name=WP_119834393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000083853.1;locus_tag=PHA56_RS03285;product=WYL domain-containing protein;protein_id=WP_119834393.1;transl_table=11 NZ_CP116214.1 RefSeq gene 687292 687861 . + . ID=gene-PHA56_RS03290;Name=PHA56_RS03290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS03290;old_locus_tag=PHA56_03290 NZ_CP116214.1 Protein Homology CDS 687292 687861 . + 0 ID=cds-WP_119834392.1;Parent=gene-PHA56_RS03290;Dbxref=Genbank:WP_119834392.1;Name=WP_119834392.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015699706.1;locus_tag=PHA56_RS03290;product=hypothetical protein;protein_id=WP_119834392.1;transl_table=11 NZ_CP116214.1 RefSeq gene 687876 688328 . + . ID=gene-PHA56_RS03295;Name=PHA56_RS03295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS03295;old_locus_tag=PHA56_03295 NZ_CP116214.1 Protein Homology CDS 687876 688328 . + 0 ID=cds-WP_100168667.1;Parent=gene-PHA56_RS03295;Dbxref=Genbank:WP_100168667.1;Name=WP_100168667.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000737910.1;locus_tag=PHA56_RS03295;product=hypothetical protein;protein_id=WP_100168667.1;transl_table=11 NZ_CP116214.1 RefSeq gene 688325 688774 . + . ID=gene-PHA56_RS03300;Name=PHA56_RS03300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS03300;old_locus_tag=PHA56_03300 NZ_CP116214.1 Protein Homology CDS 688325 688774 . + 0 ID=cds-WP_071199563.1;Parent=gene-PHA56_RS03300;Dbxref=Genbank:WP_071199563.1;Name=WP_071199563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004215773.1;locus_tag=PHA56_RS03300;product=IrmA family protein;protein_id=WP_071199563.1;transl_table=11 NZ_CP116214.1 RefSeq gene 688846 689076 . + . ID=gene-PHA56_RS03305;Name=PHA56_RS03305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS03305;old_locus_tag=PHA56_03305 NZ_CP116214.1 Protein Homology CDS 688846 689076 . + 0 ID=cds-WP_119834391.1;Parent=gene-PHA56_RS03305;Dbxref=Genbank:WP_119834391.1;Name=WP_119834391.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683448.1;locus_tag=PHA56_RS03305;product=DUF905 domain-containing protein;protein_id=WP_119834391.1;transl_table=11 NZ_CP116214.1 RefSeq gene 689175 689996 . + . ID=gene-PHA56_RS03310;Name=PHA56_RS03310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS03310;old_locus_tag=PHA56_03310 NZ_CP116214.1 Protein Homology CDS 689175 689996 . + 0 ID=cds-WP_119834390.1;Parent=gene-PHA56_RS03310;Dbxref=Genbank:WP_119834390.1;Name=WP_119834390.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001546956.1;locus_tag=PHA56_RS03310;product=DUF932 domain-containing protein;protein_id=WP_119834390.1;transl_table=11 NZ_CP116214.1 RefSeq gene 690027 690470 . + . ID=gene-PHA56_RS03315;Name=PHA56_RS03315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS03315;old_locus_tag=PHA56_03315 NZ_CP116214.1 Protein Homology CDS 690027 690470 . + 0 ID=cds-WP_025205062.1;Parent=gene-PHA56_RS03315;Dbxref=Genbank:WP_025205062.1;Name=WP_025205062.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004128347.1;locus_tag=PHA56_RS03315;product=antirestriction protein;protein_id=WP_025205062.1;transl_table=11 NZ_CP116214.1 RefSeq gene 690483 691025 . + . ID=gene-PHA56_RS03320;Name=radC;gbkey=Gene;gene=radC;gene_biotype=protein_coding;locus_tag=PHA56_RS03320;old_locus_tag=PHA56_03320 NZ_CP116214.1 Protein Homology CDS 690483 691025 . + 0 ID=cds-WP_119834389.1;Parent=gene-PHA56_RS03320;Dbxref=Genbank:WP_119834389.1;Name=WP_119834389.1;Ontology_term=GO:0006281;gbkey=CDS;gene=radC;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017694582.1;locus_tag=PHA56_RS03320;product=DNA repair protein RadC;protein_id=WP_119834389.1;transl_table=11 NZ_CP116214.1 RefSeq gene 691036 691377 . + . ID=gene-PHA56_RS03325;Name=PHA56_RS03325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS03325;old_locus_tag=PHA56_03325 NZ_CP116214.1 Protein Homology CDS 691036 691377 . + 0 ID=cds-WP_119834410.1;Parent=gene-PHA56_RS03325;Dbxref=Genbank:WP_119834410.1;Name=WP_119834410.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017694581.1;locus_tag=PHA56_RS03325;product=type IV toxin-antitoxin system YeeU family antitoxin;protein_id=WP_119834410.1;transl_table=11 NZ_CP116214.1 RefSeq gene 691398 691739 . + . ID=gene-PHA56_RS03330;Name=PHA56_RS03330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS03330;old_locus_tag=PHA56_03330 NZ_CP116214.1 Protein Homology CDS 691398 691739 . + 0 ID=cds-WP_119834388.1;Parent=gene-PHA56_RS03330;Dbxref=Genbank:WP_119834388.1;Name=WP_119834388.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004854307.1;locus_tag=PHA56_RS03330;product=TA system toxin CbtA family protein;protein_id=WP_119834388.1;transl_table=11 NZ_CP116214.1 RefSeq gene 691901 691976 . - . ID=gene-PHA56_RS03335;Name=PHA56_RS03335;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA56_RS03335;old_locus_tag=PHA56_03335 NZ_CP116214.1 tRNAscan-SE tRNA 691901 691976 . - . ID=rna-PHA56_RS03335;Parent=gene-PHA56_RS03335;anticodon=(pos:complement(691941..691943));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS03335;product=tRNA-Ile NZ_CP116214.1 tRNAscan-SE exon 691901 691976 . - . ID=exon-PHA56_RS03335-1;Parent=rna-PHA56_RS03335;anticodon=(pos:complement(691941..691943));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS03335;product=tRNA-Ile NZ_CP116214.1 RefSeq gene 692101 692607 . + . ID=gene-PHA56_RS03340;Name=mug;gbkey=Gene;gene=mug;gene_biotype=protein_coding;locus_tag=PHA56_RS03340;old_locus_tag=PHA56_03340 NZ_CP116214.1 Protein Homology CDS 692101 692607 . + 0 ID=cds-WP_009651862.1;Parent=gene-PHA56_RS03340;Dbxref=Genbank:WP_009651862.1;Name=WP_009651862.1;Ontology_term=GO:0006285,GO:0000700;gbkey=CDS;gene=mug;go_function=mismatch base pair DNA N-glycosylase activity|0000700||IEA;go_process=base-excision repair%2C AP site formation|0006285||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384024.1;locus_tag=PHA56_RS03340;product=G/U mismatch-specific DNA glycosylase;protein_id=WP_009651862.1;transl_table=11 NZ_CP116214.1 RefSeq gene 692677 693339 . - . ID=gene-PHA56_RS03345;Name=PHA56_RS03345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS03345;old_locus_tag=PHA56_03345 NZ_CP116214.1 Protein Homology CDS 692677 693339 . - 0 ID=cds-WP_032692890.1;Parent=gene-PHA56_RS03345;Dbxref=Genbank:WP_032692890.1;Name=WP_032692890.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004854303.1;locus_tag=PHA56_RS03345;product=TetR/AcrR family transcriptional regulator;protein_id=WP_032692890.1;transl_table=11 NZ_CP116214.1 RefSeq gene 693580 695424 . - . ID=gene-PHA56_RS03350;Name=rpoD;gbkey=Gene;gene=rpoD;gene_biotype=protein_coding;locus_tag=PHA56_RS03350;old_locus_tag=PHA56_03350 NZ_CP116214.1 Protein Homology CDS 693580 695424 . - 0 ID=cds-WP_004105908.1;Parent=gene-PHA56_RS03350;Dbxref=Genbank:WP_004105908.1;Name=WP_004105908.1;Ontology_term=GO:0006355,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoD;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228906.1;locus_tag=PHA56_RS03350;product=RNA polymerase sigma factor RpoD;protein_id=WP_004105908.1;transl_table=11 NZ_CP116214.1 RefSeq gene 695698 697443 . - . ID=gene-PHA56_RS03355;Name=dnaG;gbkey=Gene;gene=dnaG;gene_biotype=protein_coding;locus_tag=PHA56_RS03355;old_locus_tag=PHA56_03355 NZ_CP116214.1 Protein Homology CDS 695698 697443 . - 0 ID=cds-WP_014226898.1;Parent=gene-PHA56_RS03355;Dbxref=Genbank:WP_014226898.1;Name=WP_014226898.1;Ontology_term=GO:0006269,GO:0003896;gbkey=CDS;gene=dnaG;go_function=DNA primase activity|0003896||IEA;go_process=DNA replication%2C synthesis of RNA primer|0006269||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228905.1;locus_tag=PHA56_RS03355;product=DNA primase;protein_id=WP_014226898.1;transl_table=11 NZ_CP116214.1 RefSeq gene 697678 697893 . - . ID=gene-PHA56_RS03360;Name=rpsU;gbkey=Gene;gene=rpsU;gene_biotype=protein_coding;locus_tag=PHA56_RS03360;old_locus_tag=PHA56_03360 NZ_CP116214.1 Protein Homology CDS 697678 697893 . - 0 ID=cds-WP_001144069.1;Parent=gene-PHA56_RS03360;Dbxref=Genbank:WP_001144069.1;Name=WP_001144069.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsU;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311975.1;locus_tag=PHA56_RS03360;product=30S ribosomal protein S21;protein_id=WP_001144069.1;transl_table=11 NZ_CP116214.1 RefSeq gene 698131 699144 . + . ID=gene-PHA56_RS03365;Name=tsaD;gbkey=Gene;gene=tsaD;gene_biotype=protein_coding;locus_tag=PHA56_RS03365;old_locus_tag=PHA56_03365 NZ_CP116214.1 Protein Homology CDS 698131 699144 . + 0 ID=cds-WP_014226897.1;Parent=gene-PHA56_RS03365;Dbxref=Genbank:WP_014226897.1;Name=WP_014226897.1;Ontology_term=GO:0006400;gbkey=CDS;gene=tsaD;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001264383.1;locus_tag=PHA56_RS03365;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD;protein_id=WP_014226897.1;transl_table=11 NZ_CP116214.1 RefSeq gene 699192 700799 . - . ID=gene-PHA56_RS03370;Name=PHA56_RS03370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS03370;old_locus_tag=PHA56_03370 NZ_CP116214.1 Protein Homology CDS 699192 700799 . - 0 ID=cds-WP_014226896.1;Parent=gene-PHA56_RS03370;Dbxref=Genbank:WP_014226896.1;Name=WP_014226896.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228902.1;locus_tag=PHA56_RS03370;product=cytosine permease;protein_id=WP_014226896.1;transl_table=11 NZ_CP116214.1 RefSeq gene 700951 701568 . - . ID=gene-PHA56_RS03375;Name=ureG;gbkey=Gene;gene=ureG;gene_biotype=protein_coding;locus_tag=PHA56_RS03375;old_locus_tag=PHA56_03375 NZ_CP116214.1 Protein Homology CDS 700951 701568 . - 0 ID=cds-WP_004105899.1;Parent=gene-PHA56_RS03375;Dbxref=Genbank:WP_004105899.1;Name=WP_004105899.1;Ontology_term=GO:0019627,GO:0016530,GO:0046872;gbkey=CDS;gene=ureG;go_function=metallochaperone activity|0016530||IEA,metal ion binding|0046872||IEA;go_process=urea metabolic process|0019627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309354.1;locus_tag=PHA56_RS03375;product=urease accessory protein UreG;protein_id=WP_004105899.1;transl_table=11 NZ_CP116214.1 RefSeq gene 701577 702251 . - . ID=gene-PHA56_RS03380;Name=PHA56_RS03380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS03380;old_locus_tag=PHA56_03380 NZ_CP116214.1 Protein Homology CDS 701577 702251 . - 0 ID=cds-WP_014226895.1;Parent=gene-PHA56_RS03380;Dbxref=Genbank:WP_014226895.1;Name=WP_014226895.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309353.1;locus_tag=PHA56_RS03380;product=urease accessory protein UreF;protein_id=WP_014226895.1;transl_table=11 NZ_CP116214.1 RefSeq gene 702252 702725 . - . ID=gene-PHA56_RS03385;Name=ureE;gbkey=Gene;gene=ureE;gene_biotype=protein_coding;locus_tag=PHA56_RS03385;old_locus_tag=PHA56_03385 NZ_CP116214.1 Protein Homology CDS 702252 702725 . - 0 ID=cds-WP_014226894.1;Parent=gene-PHA56_RS03385;Dbxref=Genbank:WP_014226894.1;Name=WP_014226894.1;Ontology_term=GO:0006457,GO:0019627,GO:0065003,GO:0016151;gbkey=CDS;gene=ureE;go_function=nickel cation binding|0016151||IEA;go_process=protein folding|0006457||IEA,urea metabolic process|0019627||IEA,protein-containing complex assembly|0065003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309352.1;locus_tag=PHA56_RS03385;product=urease accessory protein UreE;protein_id=WP_014226894.1;transl_table=11 NZ_CP116214.1 RefSeq gene 702735 704438 . - . ID=gene-PHA56_RS03390;Name=ureC;gbkey=Gene;gene=ureC;gene_biotype=protein_coding;locus_tag=PHA56_RS03390;old_locus_tag=PHA56_03390 NZ_CP116214.1 Protein Homology CDS 702735 704438 . - 0 ID=cds-WP_032720245.1;Parent=gene-PHA56_RS03390;Dbxref=Genbank:WP_032720245.1;Name=WP_032720245.1;Ontology_term=GO:0019627,GO:0009039,GO:0016151;gbkey=CDS;gene=ureC;go_function=urease activity|0009039||IEA,nickel cation binding|0016151||IEA;go_process=urea metabolic process|0019627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228898.1;locus_tag=PHA56_RS03390;product=urease subunit alpha;protein_id=WP_032720245.1;transl_table=11 NZ_CP116214.1 RefSeq gene 704431 704751 . - . ID=gene-PHA56_RS03395;Name=PHA56_RS03395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS03395;old_locus_tag=PHA56_03395 NZ_CP116214.1 Protein Homology CDS 704431 704751 . - 0 ID=cds-WP_032720246.1;Parent=gene-PHA56_RS03395;Dbxref=Genbank:WP_032720246.1;Name=WP_032720246.1;Ontology_term=GO:0043419,GO:0035550;gbkey=CDS;go_component=urease complex|0035550||IEA;go_process=urea catabolic process|0043419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309350.1;locus_tag=PHA56_RS03395;product=urease subunit beta;protein_id=WP_032720246.1;transl_table=11 NZ_CP116214.1 RefSeq gene 704761 705063 . - . ID=gene-PHA56_RS03400;Name=PHA56_RS03400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS03400;old_locus_tag=PHA56_03400 NZ_CP116214.1 Protein Homology CDS 704761 705063 . - 0 ID=cds-WP_025105909.1;Parent=gene-PHA56_RS03400;Dbxref=Genbank:WP_025105909.1;Name=WP_025105909.1;Ontology_term=GO:0043419,GO:0009039,GO:0016151;gbkey=CDS;go_function=urease activity|0009039||IEA,nickel cation binding|0016151||IEA;go_process=urea catabolic process|0043419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309349.1;locus_tag=PHA56_RS03400;product=urease subunit gamma;protein_id=WP_025105909.1;transl_table=11 NZ_CP116214.1 RefSeq gene 705073 705897 . - . ID=gene-PHA56_RS03405;Name=PHA56_RS03405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS03405;old_locus_tag=PHA56_03405 NZ_CP116214.1 Protein Homology CDS 705073 705897 . - 0 ID=cds-WP_014839579.1;Parent=gene-PHA56_RS03405;Dbxref=Genbank:WP_014839579.1;Name=WP_014839579.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228895.1;locus_tag=PHA56_RS03405;product=urease accessory protein UreD;protein_id=WP_014839579.1;transl_table=11 NZ_CP116214.1 RefSeq pseudogene 705887 705970 . + . ID=gene-PHA56_RS03410;Name=PHA56_RS03410;end_range=705970,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS03410;old_locus_tag=PHA56_03410;partial=true;pseudo=true NZ_CP116214.1 Protein Homology CDS 705887 705970 . + 0 ID=cds-PHA56_RS03410;Parent=gene-PHA56_RS03410;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=705970,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228894.1;locus_tag=PHA56_RS03410;partial=true;product=short-chain dehydrogenase;pseudo=true;transl_table=11 NZ_CP116214.1 RefSeq gene 706068 706688 . - . ID=gene-PHA56_RS03415;Name=plsY;gbkey=Gene;gene=plsY;gene_biotype=protein_coding;locus_tag=PHA56_RS03415;old_locus_tag=PHA56_03415 NZ_CP116214.1 Protein Homology CDS 706068 706688 . - 0 ID=cds-WP_004854283.1;Parent=gene-PHA56_RS03415;Dbxref=Genbank:WP_004854283.1;Name=WP_004854283.1;Ontology_term=GO:0006654,GO:0008374,GO:0005886;gbkey=CDS;gene=plsY;go_component=plasma membrane|0005886||IEA;go_function=O-acyltransferase activity|0008374||IEA;go_process=phosphatidic acid biosynthetic process|0006654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228892.1;locus_tag=PHA56_RS03415;product=glycerol-3-phosphate 1-O-acyltransferase PlsY;protein_id=WP_004854283.1;transl_table=11 NZ_CP116214.1 RefSeq gene 706910 707293 . + . ID=gene-PHA56_RS03420;Name=folB;gbkey=Gene;gene=folB;gene_biotype=protein_coding;locus_tag=PHA56_RS03420;old_locus_tag=PHA56_03420 NZ_CP116214.1 Protein Homology CDS 706910 707293 . + 0 ID=cds-WP_014226889.1;Parent=gene-PHA56_RS03420;Dbxref=Genbank:WP_014226889.1;Name=WP_014226889.1;Ontology_term=GO:0006760,GO:0004150;gbkey=CDS;gene=folB;go_function=dihydroneopterin aldolase activity|0004150||IEA;go_process=folic acid-containing compound metabolic process|0006760||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004105881.1;locus_tag=PHA56_RS03420;product=bifunctional dihydroneopterin aldolase/7%2C8-dihydroneopterin epimerase;protein_id=WP_014226889.1;transl_table=11 NZ_CP116214.1 RefSeq gene 707497 708318 . + . ID=gene-PHA56_RS03425;Name=bacA;gbkey=Gene;gene=bacA;gene_biotype=protein_coding;locus_tag=PHA56_RS03425;old_locus_tag=PHA56_03425 NZ_CP116214.1 Protein Homology CDS 707497 708318 . + 0 ID=cds-WP_004854277.1;Parent=gene-PHA56_RS03425;Dbxref=Genbank:WP_004854277.1;Name=WP_004854277.1;Ontology_term=GO:0016311,GO:0050380,GO:0016020;gbkey=CDS;gene=bacA;go_component=membrane|0016020||IEA;go_function=undecaprenyl-diphosphatase activity|0050380||IEA;go_process=dephosphorylation|0016311||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311967.1;locus_tag=PHA56_RS03425;product=undecaprenyl-diphosphate phosphatase;protein_id=WP_004854277.1;transl_table=11 NZ_CP116214.1 RefSeq gene 708329 709570 . - . ID=gene-PHA56_RS03430;Name=PHA56_RS03430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS03430;old_locus_tag=PHA56_03430 NZ_CP116214.1 Protein Homology CDS 708329 709570 . - 0 ID=cds-WP_119834387.1;Parent=gene-PHA56_RS03430;Dbxref=Genbank:WP_119834387.1;Name=WP_119834387.1;Ontology_term=GO:0001680,GO:0003723,GO:0004810,GO:0005524;gbkey=CDS;go_function=RNA binding|0003723||IEA,CCA tRNA nucleotidyltransferase activity|0004810||IEA,ATP binding|0005524||IEA;go_process=tRNA 3'-terminal CCA addition|0001680||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003862543.1;locus_tag=PHA56_RS03430;product=multifunctional CCA addition/repair protein;protein_id=WP_119834387.1;transl_table=11 NZ_CP116214.1 RefSeq gene 709631 710251 . - . ID=gene-PHA56_RS03435;Name=PHA56_RS03435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS03435;old_locus_tag=PHA56_03435 NZ_CP116214.1 Protein Homology CDS 709631 710251 . - 0 ID=cds-WP_014226886.1;Parent=gene-PHA56_RS03435;Dbxref=Genbank:WP_014226886.1;Name=WP_014226886.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228888.1;locus_tag=PHA56_RS03435;product=TIGR04211 family SH3 domain-containing protein;protein_id=WP_014226886.1;transl_table=11 NZ_CP116214.1 RefSeq gene 710466 711764 . + . ID=gene-PHA56_RS03440;Name=PHA56_RS03440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS03440;old_locus_tag=PHA56_03440 NZ_CP116214.1 Protein Homology CDS 710466 711764 . + 0 ID=cds-WP_014226885.1;Parent=gene-PHA56_RS03440;Dbxref=Genbank:WP_014226885.1;Name=WP_014226885.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228887.1;locus_tag=PHA56_RS03440;product=inorganic triphosphatase;protein_id=WP_014226885.1;transl_table=11 NZ_CP116214.1 RefSeq gene 711788 714622 . + . ID=gene-PHA56_RS03445;Name=glnE;gbkey=Gene;gene=glnE;gene_biotype=protein_coding;locus_tag=PHA56_RS03445;old_locus_tag=PHA56_03445 NZ_CP116214.1 Protein Homology CDS 711788 714622 . + 0 ID=cds-WP_032720249.1;Parent=gene-PHA56_RS03445;Dbxref=Genbank:WP_032720249.1;Name=WP_032720249.1;Ontology_term=GO:0008882;gbkey=CDS;gene=glnE;go_function=[glutamate-ammonia-ligase] adenylyltransferase activity|0008882||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004854270.1;locus_tag=PHA56_RS03445;product=bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase;protein_id=WP_032720249.1;transl_table=11 NZ_CP116214.1 RefSeq gene 714681 716114 . + . ID=gene-PHA56_RS03450;Name=hldE;gbkey=Gene;gene=hldE;gene_biotype=protein_coding;locus_tag=PHA56_RS03450;old_locus_tag=PHA56_03450 NZ_CP116214.1 Protein Homology CDS 714681 716114 . + 0 ID=cds-WP_014226884.1;Parent=gene-PHA56_RS03450;Dbxref=Genbank:WP_014226884.1;Name=WP_014226884.1;Ontology_term=GO:0005975,GO:0009058,GO:0016779;gbkey=CDS;gene=hldE;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=carbohydrate metabolic process|0005975||IEA,biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228885.1;locus_tag=PHA56_RS03450;product=bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE;protein_id=WP_014226884.1;transl_table=11 NZ_CP116214.1 RefSeq gene 716388 716597 . + . ID=gene-PHA56_RS03455;Name=glgS;gbkey=Gene;gene=glgS;gene_biotype=protein_coding;locus_tag=PHA56_RS03455;old_locus_tag=PHA56_03455 NZ_CP116214.1 Protein Homology CDS 716388 716597 . + 0 ID=cds-WP_004854266.1;Parent=gene-PHA56_RS03455;Dbxref=Genbank:WP_004854266.1;Name=WP_004854266.1;gbkey=CDS;gene=glgS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228883.1;locus_tag=PHA56_RS03455;product=cell surface composition regulator GlgS;protein_id=WP_004854266.1;transl_table=11 NZ_CP116214.1 RefSeq gene 716652 716933 . - . ID=gene-PHA56_RS03460;Name=ubiK;gbkey=Gene;gene=ubiK;gene_biotype=protein_coding;locus_tag=PHA56_RS03460;old_locus_tag=PHA56_03460 NZ_CP116214.1 Protein Homology CDS 716652 716933 . - 0 ID=cds-WP_004854265.1;Parent=gene-PHA56_RS03460;Dbxref=Genbank:WP_004854265.1;Name=WP_004854265.1;gbkey=CDS;gene=ubiK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004854265.1;locus_tag=PHA56_RS03460;product=ubiquinone biosynthesis accessory factor UbiK;protein_id=WP_004854265.1;transl_table=11 NZ_CP116214.1 cmsearch riboswitch 717054 717205 . + . ID=id-NZ_CP116214.1:717054..717205;Dbxref=RFAM:RF00050;Note=FMN riboswitch;bound_moiety=flavin mononucleotide;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NZ_CP116214.1 RefSeq gene 717313 717966 . + . ID=gene-PHA56_RS03465;Name=ribB;gbkey=Gene;gene=ribB;gene_biotype=protein_coding;locus_tag=PHA56_RS03465;old_locus_tag=PHA56_03465 NZ_CP116214.1 Protein Homology CDS 717313 717966 . + 0 ID=cds-WP_004854262.1;Parent=gene-PHA56_RS03465;Dbxref=Genbank:WP_004854262.1;Name=WP_004854262.1;Ontology_term=GO:0008686;gbkey=CDS;gene=ribB;go_function=3%2C4-dihydroxy-2-butanone-4-phosphate synthase activity|0008686||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228881.1;locus_tag=PHA56_RS03465;product=3%2C4-dihydroxy-2-butanone-4-phosphate synthase;protein_id=WP_004854262.1;transl_table=11 NZ_CP116214.1 RefSeq gene 718043 719098 . - . ID=gene-PHA56_RS03470;Name=PHA56_RS03470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS03470;old_locus_tag=PHA56_03470 NZ_CP116214.1 Protein Homology CDS 718043 719098 . - 0 ID=cds-WP_014226882.1;Parent=gene-PHA56_RS03470;Dbxref=Genbank:WP_014226882.1;Name=WP_014226882.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013098752.1;locus_tag=PHA56_RS03470;product=pilus protein;protein_id=WP_014226882.1;transl_table=11 NZ_CP116214.1 RefSeq gene 719101 719835 . - . ID=gene-PHA56_RS03475;Name=PHA56_RS03475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS03475;old_locus_tag=PHA56_03475 NZ_CP116214.1 Protein Homology CDS 719101 719835 . - 0 ID=cds-WP_032720275.1;Parent=gene-PHA56_RS03475;Dbxref=Genbank:WP_032720275.1;Name=WP_032720275.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014068439.1;locus_tag=PHA56_RS03475;product=molecular chaperone;protein_id=WP_032720275.1;transl_table=11 NZ_CP116214.1 RefSeq gene 719852 722284 . - . ID=gene-PHA56_RS03480;Name=PHA56_RS03480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS03480;old_locus_tag=PHA56_03480 NZ_CP116214.1 Protein Homology CDS 719852 722284 . - 0 ID=cds-WP_223226799.1;Parent=gene-PHA56_RS03480;Dbxref=Genbank:WP_223226799.1;Name=WP_223226799.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001060690.1;locus_tag=PHA56_RS03480;product=fimbrial biogenesis outer membrane usher protein;protein_id=WP_223226799.1;transl_table=11 NZ_CP116214.1 RefSeq gene 722469 723041 . - . ID=gene-PHA56_RS03485;Name=PHA56_RS03485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS03485;old_locus_tag=PHA56_03485 NZ_CP116214.1 Protein Homology CDS 722469 723041 . - 0 ID=cds-WP_014226879.1;Parent=gene-PHA56_RS03485;Dbxref=Genbank:WP_014226879.1;Name=WP_014226879.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014839573.1;locus_tag=PHA56_RS03485;product=fimbrial-like protein;protein_id=WP_014226879.1;transl_table=11 NZ_CP116214.1 RefSeq gene 723498 724268 . - . ID=gene-PHA56_RS03490;Name=zupT;gbkey=Gene;gene=zupT;gene_biotype=protein_coding;locus_tag=PHA56_RS03490;old_locus_tag=PHA56_03490 NZ_CP116214.1 Protein Homology CDS 723498 724268 . - 0 ID=cds-WP_119834409.1;Parent=gene-PHA56_RS03490;Dbxref=Genbank:WP_119834409.1;Name=WP_119834409.1;gbkey=CDS;gene=zupT;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228880.1;locus_tag=PHA56_RS03490;product=zinc transporter ZupT;protein_id=WP_119834409.1;transl_table=11 NZ_CP116214.1 RefSeq gene 724462 725253 . + . ID=gene-PHA56_RS03495;Name=ygiD;gbkey=Gene;gene=ygiD;gene_biotype=protein_coding;locus_tag=PHA56_RS03495;old_locus_tag=PHA56_03495 NZ_CP116214.1 Protein Homology CDS 724462 725253 . + 0 ID=cds-WP_032720250.1;Parent=gene-PHA56_RS03495;Dbxref=Genbank:WP_032720250.1;Name=WP_032720250.1;gbkey=CDS;gene=ygiD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228879.1;locus_tag=PHA56_RS03495;product=4%2C5-DOPA dioxygenase extradiol;protein_id=WP_032720250.1;transl_table=11 NZ_CP116214.1 RefSeq gene 725299 726459 . - . ID=gene-PHA56_RS03500;Name=PHA56_RS03500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS03500;old_locus_tag=PHA56_03500 NZ_CP116214.1 Protein Homology CDS 725299 726459 . - 0 ID=cds-WP_032720251.1;Parent=gene-PHA56_RS03500;Dbxref=Genbank:WP_032720251.1;Name=WP_032720251.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228878.1;locus_tag=PHA56_RS03500;product=glutathionylspermidine synthase family protein;protein_id=WP_032720251.1;transl_table=11 NZ_CP116214.1 RefSeq gene 726465 727133 . - . ID=gene-PHA56_RS03505;Name=PHA56_RS03505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS03505;old_locus_tag=PHA56_03505 NZ_CP116214.1 Protein Homology CDS 726465 727133 . - 0 ID=cds-WP_004125303.1;Parent=gene-PHA56_RS03505;Dbxref=Genbank:WP_004125303.1;Name=WP_004125303.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462102.1;locus_tag=PHA56_RS03505;product=DUF1190 family protein;protein_id=WP_004125303.1;transl_table=11 NZ_CP116214.1 RefSeq gene 727303 728751 . - . ID=gene-PHA56_RS03510;Name=tolC;gbkey=Gene;gene=tolC;gene_biotype=protein_coding;locus_tag=PHA56_RS03510;old_locus_tag=PHA56_03510 NZ_CP116214.1 Protein Homology CDS 727303 728751 . - 0 ID=cds-WP_032720252.1;Parent=gene-PHA56_RS03510;Dbxref=Genbank:WP_032720252.1;Name=WP_032720252.1;Ontology_term=GO:0055085,GO:0015562;gbkey=CDS;gene=tolC;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228876.1;locus_tag=PHA56_RS03510;product=outer membrane channel protein TolC;protein_id=WP_032720252.1;transl_table=11 NZ_CP116214.1 RefSeq gene 728947 729579 . + . ID=gene-PHA56_RS03515;Name=nudF;gbkey=Gene;gene=nudF;gene_biotype=protein_coding;locus_tag=PHA56_RS03515;old_locus_tag=PHA56_03515 NZ_CP116214.1 Protein Homology CDS 728947 729579 . + 0 ID=cds-WP_038423669.1;Parent=gene-PHA56_RS03515;Dbxref=Genbank:WP_038423669.1;Name=WP_038423669.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;gene=nudF;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228875.1;locus_tag=PHA56_RS03515;product=ADP-ribose diphosphatase;protein_id=WP_038423669.1;transl_table=11 NZ_CP116214.1 RefSeq gene 729576 729998 . + . ID=gene-PHA56_RS03520;Name=PHA56_RS03520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS03520;old_locus_tag=PHA56_03520 NZ_CP116214.1 Protein Homology CDS 729576 729998 . + 0 ID=cds-WP_014226874.1;Parent=gene-PHA56_RS03520;Dbxref=Genbank:WP_014226874.1;Name=WP_014226874.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228874.1;locus_tag=PHA56_RS03520;product=DUF1249 family protein;protein_id=WP_014226874.1;transl_table=11 NZ_CP116214.1 RefSeq gene 730023 730850 . + . ID=gene-PHA56_RS03525;Name=cpdA;gbkey=Gene;gene=cpdA;gene_biotype=protein_coding;locus_tag=PHA56_RS03525;old_locus_tag=PHA56_03525 NZ_CP116214.1 Protein Homology CDS 730023 730850 . + 0 ID=cds-WP_014226873.1;Parent=gene-PHA56_RS03525;Dbxref=Genbank:WP_014226873.1;Name=WP_014226873.1;Ontology_term=GO:0004115;gbkey=CDS;gene=cpdA;go_function=3'%2C5'-cyclic-AMP phosphodiesterase activity|0004115||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228873.1;locus_tag=PHA56_RS03525;product=3'%2C5'-cyclic-AMP phosphodiesterase;protein_id=WP_014226873.1;transl_table=11 NZ_CP116214.1 RefSeq gene 730850 731425 . + . ID=gene-PHA56_RS03530;Name=yqiA;gbkey=Gene;gene=yqiA;gene_biotype=protein_coding;locus_tag=PHA56_RS03530;old_locus_tag=PHA56_03530 NZ_CP116214.1 Protein Homology CDS 730850 731425 . + 0 ID=cds-WP_004854243.1;Parent=gene-PHA56_RS03530;Dbxref=Genbank:WP_004854243.1;Name=WP_004854243.1;gbkey=CDS;gene=yqiA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228872.1;locus_tag=PHA56_RS03530;product=esterase YqiA;protein_id=WP_004854243.1;transl_table=11 NZ_CP116214.1 RefSeq gene 731456 733351 . + . ID=gene-PHA56_RS03535;Name=parE;gbkey=Gene;gene=parE;gene_biotype=protein_coding;locus_tag=PHA56_RS03535;old_locus_tag=PHA56_03535 NZ_CP116214.1 Protein Homology CDS 731456 733351 . + 0 ID=cds-WP_004854242.1;Parent=gene-PHA56_RS03535;Dbxref=Genbank:WP_004854242.1;Name=WP_004854242.1;Ontology_term=GO:0006265,GO:0003918,GO:0009340;gbkey=CDS;gene=parE;go_component=DNA topoisomerase IV complex|0009340||IEA;go_function=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003024571.1;locus_tag=PHA56_RS03535;product=DNA topoisomerase IV subunit B;protein_id=WP_004854242.1;transl_table=11 NZ_CP116214.1 RefSeq gene 733393 733707 . - . ID=gene-PHA56_RS03540;Name=PHA56_RS03540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS03540;old_locus_tag=PHA56_03540 NZ_CP116214.1 Protein Homology CDS 733393 733707 . - 0 ID=cds-WP_004125281.1;Parent=gene-PHA56_RS03540;Dbxref=Genbank:WP_004125281.1;Name=WP_004125281.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228870.1;locus_tag=PHA56_RS03540;product=putative quinol monooxygenase;protein_id=WP_004125281.1;transl_table=11 NZ_CP116214.1 RefSeq gene 733799 734380 . - . ID=gene-PHA56_RS03545;Name=PHA56_RS03545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS03545;old_locus_tag=PHA56_03545 NZ_CP116214.1 Protein Homology CDS 733799 734380 . - 0 ID=cds-WP_014226872.1;Parent=gene-PHA56_RS03545;Dbxref=Genbank:WP_014226872.1;Name=WP_014226872.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228869.1;locus_tag=PHA56_RS03545;product=NAD(P)H-dependent oxidoreductase;protein_id=WP_014226872.1;transl_table=11 NZ_CP116214.1 RefSeq gene 734487 735836 . - . ID=gene-PHA56_RS03550;Name=qseC;gbkey=Gene;gene=qseC;gene_biotype=protein_coding;locus_tag=PHA56_RS03550;old_locus_tag=PHA56_03550 NZ_CP116214.1 Protein Homology CDS 734487 735836 . - 0 ID=cds-WP_014839569.1;Parent=gene-PHA56_RS03550;Dbxref=Genbank:WP_014839569.1;Name=WP_014839569.1;Ontology_term=GO:0007165,GO:0000155;gbkey=CDS;gene=qseC;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228868.1;locus_tag=PHA56_RS03550;product=two-component system sensor histidine kinase QseC;protein_id=WP_014839569.1;transl_table=11 NZ_CP116214.1 RefSeq gene 735833 736492 . - . ID=gene-PHA56_RS03555;Name=qseB;gbkey=Gene;gene=qseB;gene_biotype=protein_coding;locus_tag=PHA56_RS03555;old_locus_tag=PHA56_03555 NZ_CP116214.1 Protein Homology CDS 735833 736492 . - 0 ID=cds-WP_014226870.1;Parent=gene-PHA56_RS03555;Dbxref=Genbank:WP_014226870.1;Name=WP_014226870.1;gbkey=CDS;gene=qseB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228867.1;locus_tag=PHA56_RS03555;product=two-component system response regulator QseB;protein_id=WP_014226870.1;transl_table=11 NZ_CP116214.1 RefSeq gene 736643 737050 . + . ID=gene-PHA56_RS03560;Name=PHA56_RS03560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS03560;old_locus_tag=PHA56_03560 NZ_CP116214.1 Protein Homology CDS 736643 737050 . + 0 ID=cds-WP_014839568.1;Parent=gene-PHA56_RS03560;Dbxref=Genbank:WP_014839568.1;Name=WP_014839568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228866.1;locus_tag=PHA56_RS03560;product=YgiW/YdeI family stress tolerance OB fold protein;protein_id=WP_014839568.1;transl_table=11 NZ_CP116214.1 RefSeq gene 737128 737997 . + . ID=gene-PHA56_RS03565;Name=PHA56_RS03565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS03565;old_locus_tag=PHA56_03565 NZ_CP116214.1 Protein Homology CDS 737128 737997 . + 0 ID=cds-WP_009651841.1;Parent=gene-PHA56_RS03565;Dbxref=Genbank:WP_009651841.1;Name=WP_009651841.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016507186.1;locus_tag=PHA56_RS03565;product=AraC family transcriptional regulator;protein_id=WP_009651841.1;transl_table=11 NZ_CP116214.1 RefSeq gene 738120 740378 . + . ID=gene-PHA56_RS03570;Name=parC;gbkey=Gene;gene=parC;gene_biotype=protein_coding;locus_tag=PHA56_RS03570;old_locus_tag=PHA56_03570 NZ_CP116214.1 Protein Homology CDS 738120 740378 . + 0 ID=cds-WP_014226868.1;Parent=gene-PHA56_RS03570;Dbxref=Genbank:WP_014226868.1;Name=WP_014226868.1;Ontology_term=GO:0006265,GO:0003918,GO:0009340;gbkey=CDS;gene=parC;go_component=DNA topoisomerase IV complex|0009340||IEA;go_function=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228864.1;locus_tag=PHA56_RS03570;product=DNA topoisomerase IV subunit A;protein_id=WP_014226868.1;transl_table=11 NZ_CP116214.1 RefSeq gene 740571 741308 . + . ID=gene-PHA56_RS03575;Name=plsC;gbkey=Gene;gene=plsC;gene_biotype=protein_coding;gene_synonym=parF;locus_tag=PHA56_RS03575;old_locus_tag=PHA56_03575 NZ_CP116214.1 Protein Homology CDS 740571 741308 . + 0 ID=cds-WP_004125254.1;Parent=gene-PHA56_RS03575;Dbxref=Genbank:WP_004125254.1;Name=WP_004125254.1;gbkey=CDS;gene=plsC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228863.1;locus_tag=PHA56_RS03575;product=1-acylglycerol-3-phosphate O-acyltransferase;protein_id=WP_004125254.1;transl_table=11 NZ_CP116214.1 RefSeq gene 741393 742805 . + . ID=gene-PHA56_RS03580;Name=ftsP;gbkey=Gene;gene=ftsP;gene_biotype=protein_coding;locus_tag=PHA56_RS03580;old_locus_tag=PHA56_03580 NZ_CP116214.1 Protein Homology CDS 741393 742805 . + 0 ID=cds-WP_004854230.1;Parent=gene-PHA56_RS03580;Dbxref=Genbank:WP_004854230.1;Name=WP_004854230.1;Ontology_term=GO:0043093,GO:0016491;gbkey=CDS;gene=ftsP;go_function=oxidoreductase activity|0016491||IEA;go_process=FtsZ-dependent cytokinesis|0043093||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228862.1;locus_tag=PHA56_RS03580;product=cell division protein FtsP;protein_id=WP_004854230.1;transl_table=11 NZ_CP116214.1 RefSeq pseudogene 742836 745049 . + . ID=gene-PHA56_RS03585;Name=PHA56_RS03585;end_range=745049,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS03585;old_locus_tag=PHA56_03585;partial=true;pseudo=true NZ_CP116214.1 Protein Homology CDS 742836 745049 . + 0 ID=cds-PHA56_RS03585;Parent=gene-PHA56_RS03585;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:1904047;end_range=745049,.;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228861.1;locus_tag=PHA56_RS03585;partial=true;product=YgiQ family radical SAM protein;pseudo=true;transl_table=11 NZ_CP116214.1 RefSeq gene 745203 745658 . - . ID=gene-PHA56_RS03590;Name=PHA56_RS03590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS03590;old_locus_tag=PHA56_03590 NZ_CP116214.1 Protein Homology CDS 745203 745658 . - 0 ID=cds-WP_014226866.1;Parent=gene-PHA56_RS03590;Dbxref=Genbank:WP_014226866.1;Name=WP_014226866.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462082.1;locus_tag=PHA56_RS03590;product=HIT family protein;protein_id=WP_014226866.1;transl_table=11 NZ_CP116214.1 RefSeq gene 745757 746584 . - . ID=gene-PHA56_RS03595;Name=dkgA;gbkey=Gene;gene=dkgA;gene_biotype=protein_coding;locus_tag=PHA56_RS03595;old_locus_tag=PHA56_03595 NZ_CP116214.1 Protein Homology CDS 745757 746584 . - 0 ID=cds-WP_014226865.1;Parent=gene-PHA56_RS03595;Dbxref=Genbank:WP_014226865.1;Name=WP_014226865.1;Ontology_term=GO:0050580;gbkey=CDS;gene=dkgA;go_function=2%2C5-didehydrogluconate reductase activity|0050580||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228859.1;locus_tag=PHA56_RS03595;product=2%2C5-didehydrogluconate reductase DkgA;protein_id=WP_014226865.1;transl_table=11 NZ_CP116214.1 RefSeq gene 746717 747880 . - . ID=gene-PHA56_RS03600;Name=yqhD;gbkey=Gene;gene=yqhD;gene_biotype=protein_coding;locus_tag=PHA56_RS03600;old_locus_tag=PHA56_03600 NZ_CP116214.1 Protein Homology CDS 746717 747880 . - 0 ID=cds-WP_038423643.1;Parent=gene-PHA56_RS03600;Dbxref=Genbank:WP_038423643.1;Name=WP_038423643.1;Ontology_term=GO:0046872,GO:1990362;gbkey=CDS;gene=yqhD;go_function=metal ion binding|0046872||IEA,butanol dehydrogenase activity|1990362||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228858.1;locus_tag=PHA56_RS03600;product=alcohol dehydrogenase;protein_id=WP_038423643.1;transl_table=11 NZ_CP116214.1 RefSeq gene 748077 748976 . + . ID=gene-PHA56_RS03605;Name=PHA56_RS03605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS03605;old_locus_tag=PHA56_03605 NZ_CP116214.1 Protein Homology CDS 748077 748976 . + 0 ID=cds-WP_014226863.1;Parent=gene-PHA56_RS03605;Dbxref=Genbank:WP_014226863.1;Name=WP_014226863.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228857.1;locus_tag=PHA56_RS03605;product=AraC family transcriptional regulator;protein_id=WP_014226863.1;transl_table=11 NZ_CP116214.1 RefSeq gene 749021 749680 . - . ID=gene-PHA56_RS03610;Name=PHA56_RS03610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS03610;old_locus_tag=PHA56_03610 NZ_CP116214.1 Protein Homology CDS 749021 749680 . - 0 ID=cds-WP_004125241.1;Parent=gene-PHA56_RS03610;Dbxref=Genbank:WP_004125241.1;Name=WP_004125241.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228856.1;locus_tag=PHA56_RS03610;product=DedA family general envelope maintenance protein YghB;protein_id=WP_004125241.1;transl_table=11 NZ_CP116214.1 RefSeq gene 749813 751000 . - . ID=gene-PHA56_RS03615;Name=metC;gbkey=Gene;gene=metC;gene_biotype=protein_coding;locus_tag=PHA56_RS03615;old_locus_tag=PHA56_03615 NZ_CP116214.1 Protein Homology CDS 749813 751000 . - 0 ID=cds-WP_004854212.1;Parent=gene-PHA56_RS03615;Dbxref=Genbank:WP_004854212.1;Name=WP_004854212.1;Ontology_term=GO:0006520,GO:0019346,GO:0004121,GO:0030170;gbkey=CDS;gene=metC;go_function=cystathionine beta-lyase activity|0004121||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=amino acid metabolic process|0006520||IEA,transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228855.1;locus_tag=PHA56_RS03615;product=cystathionine beta-lyase;protein_id=WP_004854212.1;transl_table=11 NZ_CP116214.1 RefSeq gene 751252 751983 . + . ID=gene-PHA56_RS03620;Name=exbB;gbkey=Gene;gene=exbB;gene_biotype=protein_coding;locus_tag=PHA56_RS03620;old_locus_tag=PHA56_03620 NZ_CP116214.1 Protein Homology CDS 751252 751983 . + 0 ID=cds-WP_004854209.1;Parent=gene-PHA56_RS03620;Dbxref=Genbank:WP_004854209.1;Name=WP_004854209.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=exbB;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228853.1;locus_tag=PHA56_RS03620;product=tol-pal system-associated acyl-CoA thioesterase;protein_id=WP_004854209.1;transl_table=11 NZ_CP116214.1 RefSeq gene 751990 752415 . + . ID=gene-PHA56_RS03625;Name=exbD;gbkey=Gene;gene=exbD;gene_biotype=protein_coding;locus_tag=PHA56_RS03625;old_locus_tag=PHA56_03625 NZ_CP116214.1 Protein Homology CDS 751990 752415 . + 0 ID=cds-WP_014226862.1;Parent=gene-PHA56_RS03625;Dbxref=Genbank:WP_014226862.1;Name=WP_014226862.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=exbD;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228852.1;locus_tag=PHA56_RS03625;product=TonB system transport protein ExbD;protein_id=WP_014226862.1;transl_table=11 NZ_CP116214.1 RefSeq gene 752558 753052 . + . ID=gene-PHA56_RS03630;Name=PHA56_RS03630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS03630;old_locus_tag=PHA56_03630 NZ_CP116214.1 Protein Homology CDS 752558 753052 . + 0 ID=cds-WP_004105804.1;Parent=gene-PHA56_RS03630;Dbxref=Genbank:WP_004105804.1;Name=WP_004105804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228849.1;locus_tag=PHA56_RS03630;product=TIGR00645 family protein;protein_id=WP_004105804.1;transl_table=11 NZ_CP116214.1 RefSeq gene 753174 754061 . + . ID=gene-PHA56_RS03635;Name=yghX;gbkey=Gene;gene=yghX;gene_biotype=protein_coding;locus_tag=PHA56_RS03635;old_locus_tag=PHA56_03635 NZ_CP116214.1 Protein Homology CDS 753174 754061 . + 0 ID=cds-WP_038423641.1;Parent=gene-PHA56_RS03635;Dbxref=Genbank:WP_038423641.1;Name=WP_038423641.1;gbkey=CDS;gene=yghX;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228848.1;locus_tag=PHA56_RS03635;product=YghX family hydrolase;protein_id=WP_038423641.1;transl_table=11 NZ_CP116214.1 RefSeq gene 754140 754427 . + . ID=gene-PHA56_RS03640;Name=PHA56_RS03640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS03640;old_locus_tag=PHA56_03640 NZ_CP116214.1 Protein Homology CDS 754140 754427 . + 0 ID=cds-WP_014226860.1;Parent=gene-PHA56_RS03640;Dbxref=Genbank:WP_014226860.1;Name=WP_014226860.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228847.1;locus_tag=PHA56_RS03640;product=DUF2623 family protein;protein_id=WP_014226860.1;transl_table=11 NZ_CP116214.1 RefSeq gene 754463 755329 . - . ID=gene-PHA56_RS03645;Name=yghU;gbkey=Gene;gene=yghU;gene_biotype=protein_coding;locus_tag=PHA56_RS03645;old_locus_tag=PHA56_03645 NZ_CP116214.1 Protein Homology CDS 754463 755329 . - 0 ID=cds-WP_038423640.1;Parent=gene-PHA56_RS03645;Dbxref=Genbank:WP_038423640.1;Name=WP_038423640.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=yghU;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228846.1;locus_tag=PHA56_RS03645;product=glutathione-dependent disulfide-bond oxidoreductase;protein_id=WP_038423640.1;transl_table=11 NZ_CP116214.1 RefSeq gene 755402 755962 . - . ID=gene-PHA56_RS03650;Name=PHA56_RS03650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS03650;old_locus_tag=PHA56_03650 NZ_CP116214.1 Protein Homology CDS 755402 755962 . - 0 ID=cds-WP_014839560.1;Parent=gene-PHA56_RS03650;Dbxref=Genbank:WP_014839560.1;Name=WP_014839560.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228845.1;locus_tag=PHA56_RS03650;product=thioredoxin domain-containing protein;protein_id=WP_014839560.1;transl_table=11 NZ_CP116214.1 RefSeq gene 756170 758041 . + . ID=gene-PHA56_RS03655;Name=gss;gbkey=Gene;gene=gss;gene_biotype=protein_coding;locus_tag=PHA56_RS03655;old_locus_tag=PHA56_03655 NZ_CP116214.1 Protein Homology CDS 756170 758041 . + 0 ID=cds-WP_009654105.1;Parent=gene-PHA56_RS03655;Dbxref=Genbank:WP_009654105.1;Name=WP_009654105.1;gbkey=CDS;gene=gss;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226857.1;locus_tag=PHA56_RS03655;product=bifunctional glutathionylspermidine amidase/synthase;protein_id=WP_009654105.1;transl_table=11 NZ_CP116214.1 RefSeq gene 758308 759489 . + . ID=gene-PHA56_RS03660;Name=PHA56_RS03660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS03660;old_locus_tag=PHA56_03660 NZ_CP116214.1 Protein Homology CDS 758308 759489 . + 0 ID=cds-WP_014226856.1;Parent=gene-PHA56_RS03660;Dbxref=Genbank:WP_014226856.1;Name=WP_014226856.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228842.1;locus_tag=PHA56_RS03660;product=PLP-dependent aminotransferase family protein;protein_id=WP_014226856.1;transl_table=11 NZ_CP116214.1 RefSeq gene 759824 760012 . - . ID=gene-PHA56_RS03665;Name=PHA56_RS03665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS03665;old_locus_tag=PHA56_03665 NZ_CP116214.1 Protein Homology CDS 759824 760012 . - 0 ID=cds-WP_014226855.1;Parent=gene-PHA56_RS03665;Dbxref=Genbank:WP_014226855.1;Name=WP_014226855.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226855.1;locus_tag=PHA56_RS03665;product=hypothetical protein;protein_id=WP_014226855.1;transl_table=11 NZ_CP116214.1 RefSeq gene 760283 762202 . - . ID=gene-PHA56_RS03670;Name=PHA56_RS03670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS03670;old_locus_tag=PHA56_03670 NZ_CP116214.1 Protein Homology CDS 760283 762202 . - 0 ID=cds-WP_271292957.1;Parent=gene-PHA56_RS03670;Dbxref=Genbank:WP_271292957.1;Name=WP_271292957.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004854194.1;locus_tag=PHA56_RS03670;product=tyrosine-protein phosphatase;protein_id=WP_271292957.1;transl_table=11 NZ_CP116214.1 RefSeq gene 762466 762804 . - . ID=gene-PHA56_RS03675;Name=PHA56_RS03675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS03675;old_locus_tag=PHA56_03675 NZ_CP116214.1 Protein Homology CDS 762466 762804 . - 0 ID=cds-WP_014839557.1;Parent=gene-PHA56_RS03675;Dbxref=Genbank:WP_014839557.1;Name=WP_014839557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014839557.1;locus_tag=PHA56_RS03675;product=hypothetical protein;protein_id=WP_014839557.1;transl_table=11 NZ_CP116214.1 RefSeq gene 762911 763513 . - . ID=gene-PHA56_RS03680;Name=PHA56_RS03680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS03680;old_locus_tag=PHA56_03680 NZ_CP116214.1 Protein Homology CDS 762911 763513 . - 0 ID=cds-WP_014226852.1;Parent=gene-PHA56_RS03680;Dbxref=Genbank:WP_014226852.1;Name=WP_014226852.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228839.1;locus_tag=PHA56_RS03680;product=short chain dehydrogenase;protein_id=WP_014226852.1;transl_table=11 NZ_CP116214.1 RefSeq gene 763612 764511 . + . ID=gene-PHA56_RS03685;Name=PHA56_RS03685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS03685;old_locus_tag=PHA56_03685 NZ_CP116214.1 Protein Homology CDS 763612 764511 . + 0 ID=cds-WP_014226851.1;Parent=gene-PHA56_RS03685;Dbxref=Genbank:WP_014226851.1;Name=WP_014226851.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004115604.1;locus_tag=PHA56_RS03685;product=LysR family transcriptional regulator;protein_id=WP_014226851.1;transl_table=11 NZ_CP116214.1 RefSeq gene 764591 765736 . - . ID=gene-PHA56_RS03690;Name=PHA56_RS03690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS03690;old_locus_tag=PHA56_03690 NZ_CP116214.1 Protein Homology CDS 764591 765736 . - 0 ID=cds-WP_038423636.1;Parent=gene-PHA56_RS03690;Dbxref=Genbank:WP_038423636.1;Name=WP_038423636.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226850.1;locus_tag=PHA56_RS03690;product=PLP-dependent aspartate aminotransferase family protein;protein_id=WP_038423636.1;transl_table=11 NZ_CP116214.1 RefSeq gene 765747 767117 . - . ID=gene-PHA56_RS03695;Name=PHA56_RS03695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS03695;old_locus_tag=PHA56_03695 NZ_CP116214.1 Protein Homology CDS 765747 767117 . - 0 ID=cds-WP_014226849.1;Parent=gene-PHA56_RS03695;Dbxref=Genbank:WP_014226849.1;Name=WP_014226849.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875164.1;locus_tag=PHA56_RS03695;product=cystathionine beta-synthase;protein_id=WP_014226849.1;transl_table=11 NZ_CP116214.1 RefSeq gene 767663 769051 . + . ID=gene-PHA56_RS03700;Name=PHA56_RS03700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS03700;old_locus_tag=PHA56_03700 NZ_CP116214.1 Protein Homology CDS 767663 769051 . + 0 ID=cds-WP_042946044.1;Parent=gene-PHA56_RS03700;Dbxref=Genbank:WP_042946044.1;Name=WP_042946044.1;Ontology_term=GO:0006820,GO:0008509,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=monoatomic anion transmembrane transporter activity|0008509||IEA;go_process=monoatomic anion transport|0006820||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014839550.1;locus_tag=PHA56_RS03700;product=DASS family sodium-coupled anion symporter;protein_id=WP_042946044.1;transl_table=11 NZ_CP116214.1 RefSeq gene 769513 769588 . - . ID=gene-PHA56_RS03705;Name=PHA56_RS03705;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA56_RS03705;old_locus_tag=PHA56_03705 NZ_CP116214.1 tRNAscan-SE tRNA 769513 769588 . - . ID=rna-PHA56_RS03705;Parent=gene-PHA56_RS03705;anticodon=(pos:complement(769553..769555));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS03705;product=tRNA-Phe NZ_CP116214.1 tRNAscan-SE exon 769513 769588 . - . ID=exon-PHA56_RS03705-1;Parent=rna-PHA56_RS03705;anticodon=(pos:complement(769553..769555));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS03705;product=tRNA-Phe NZ_CP116214.1 RefSeq gene 769694 770410 . - . ID=gene-PHA56_RS03710;Name=PHA56_RS03710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS03710;old_locus_tag=PHA56_03710 NZ_CP116214.1 Protein Homology CDS 769694 770410 . - 0 ID=cds-WP_004135818.1;Parent=gene-PHA56_RS03710;Dbxref=Genbank:WP_004135818.1;Name=WP_004135818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228769.1;locus_tag=PHA56_RS03710;product=DUF554 domain-containing protein;protein_id=WP_004135818.1;transl_table=11 NZ_CP116214.1 RefSeq gene 770848 772986 . + . ID=gene-PHA56_RS03715;Name=PHA56_RS03715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS03715;old_locus_tag=PHA56_03715 NZ_CP116214.1 Protein Homology CDS 770848 772986 . + 0 ID=cds-WP_014226846.1;Parent=gene-PHA56_RS03715;Dbxref=Genbank:WP_014226846.1;Name=WP_014226846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004125193.1;locus_tag=PHA56_RS03715;product=ornithine decarboxylase;protein_id=WP_014226846.1;transl_table=11 NZ_CP116214.1 RefSeq gene 773054 774310 . - . ID=gene-PHA56_RS03720;Name=PHA56_RS03720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS03720;old_locus_tag=PHA56_03720 NZ_CP116214.1 Protein Homology CDS 773054 774310 . - 0 ID=cds-WP_009651814.1;Parent=gene-PHA56_RS03720;Dbxref=Genbank:WP_009651814.1;Name=WP_009651814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462029.1;locus_tag=PHA56_RS03720;product=nucleoside permease;protein_id=WP_009651814.1;transl_table=11 NZ_CP116214.1 RefSeq gene 774504 775586 . - . ID=gene-PHA56_RS03725;Name=mltC;gbkey=Gene;gene=mltC;gene_biotype=protein_coding;locus_tag=PHA56_RS03725;old_locus_tag=PHA56_03725 NZ_CP116214.1 Protein Homology CDS 774504 775586 . - 0 ID=cds-WP_103433509.1;Parent=gene-PHA56_RS03725;Dbxref=Genbank:WP_103433509.1;Name=WP_103433509.1;Ontology_term=GO:0000270,GO:0008933,GO:0016020;gbkey=CDS;gene=mltC;go_component=membrane|0016020||IEA;go_function=lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417438.2;locus_tag=PHA56_RS03725;product=membrane-bound lytic murein transglycosylase MltC;protein_id=WP_103433509.1;transl_table=11 NZ_CP116214.1 RefSeq gene 775637 775912 . - . ID=gene-PHA56_RS03730;Name=PHA56_RS03730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS03730;old_locus_tag=PHA56_03730 NZ_CP116214.1 Protein Homology CDS 775637 775912 . - 0 ID=cds-WP_004854175.1;Parent=gene-PHA56_RS03730;Dbxref=Genbank:WP_004854175.1;Name=WP_004854175.1;Ontology_term=GO:0005506;gbkey=CDS;go_function=iron ion binding|0005506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228764.1;locus_tag=PHA56_RS03730;product=oxidative damage protection protein;protein_id=WP_004854175.1;transl_table=11 NZ_CP116214.1 RefSeq gene 775940 776998 . - . ID=gene-PHA56_RS03735;Name=mutY;gbkey=Gene;gene=mutY;gene_biotype=protein_coding;locus_tag=PHA56_RS03735;old_locus_tag=PHA56_03735 NZ_CP116214.1 Protein Homology CDS 775940 776998 . - 0 ID=cds-WP_032692855.1;Parent=gene-PHA56_RS03735;Dbxref=Genbank:WP_032692855.1;Name=WP_032692855.1;Ontology_term=GO:0006281,GO:0019104;gbkey=CDS;gene=mutY;go_function=DNA N-glycosylase activity|0019104||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228763.1;locus_tag=PHA56_RS03735;product=A/G-specific adenine glycosylase;protein_id=WP_032692855.1;transl_table=11 NZ_CP116214.1 RefSeq gene 777135 777854 . + . ID=gene-PHA56_RS03740;Name=trmB;gbkey=Gene;gene=trmB;gene_biotype=protein_coding;locus_tag=PHA56_RS03740;old_locus_tag=PHA56_03740 NZ_CP116214.1 Protein Homology CDS 777135 777854 . + 0 ID=cds-WP_004854170.1;Parent=gene-PHA56_RS03740;Dbxref=Genbank:WP_004854170.1;Name=WP_004854170.1;Ontology_term=GO:0006400,GO:0008176;gbkey=CDS;gene=trmB;go_function=tRNA (guanine-N7-)-methyltransferase activity|0008176||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228762.1;locus_tag=PHA56_RS03740;product=tRNA (guanosine(46)-N7)-methyltransferase TrmB;protein_id=WP_004854170.1;transl_table=11 NZ_CP116214.1 RefSeq gene 777854 778180 . + . ID=gene-PHA56_RS03745;Name=PHA56_RS03745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS03745;old_locus_tag=PHA56_03745 NZ_CP116214.1 Protein Homology CDS 777854 778180 . + 0 ID=cds-WP_004854168.1;Parent=gene-PHA56_RS03745;Dbxref=Genbank:WP_004854168.1;Name=WP_004854168.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228761.1;locus_tag=PHA56_RS03745;product=YggL family protein;protein_id=WP_004854168.1;transl_table=11 NZ_CP116214.1 RefSeq gene 778231 778950 . + . ID=gene-PHA56_RS03750;Name=PHA56_RS03750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS03750;old_locus_tag=PHA56_03750 NZ_CP116214.1 Protein Homology CDS 778231 778950 . + 0 ID=cds-WP_009651812.1;Parent=gene-PHA56_RS03750;Dbxref=Genbank:WP_009651812.1;Name=WP_009651812.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228760.1;locus_tag=PHA56_RS03750;product=DUF2884 domain-containing protein;protein_id=WP_009651812.1;transl_table=11 NZ_CP116214.1 RefSeq gene 778999 780300 . - . ID=gene-PHA56_RS03755;Name=PHA56_RS03755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS03755;old_locus_tag=PHA56_03755 NZ_CP116214.1 Protein Homology CDS 778999 780300 . - 0 ID=cds-WP_004105725.1;Parent=gene-PHA56_RS03755;Dbxref=Genbank:WP_004105725.1;Name=WP_004105725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708726.2;locus_tag=PHA56_RS03755;product=TRAP transporter large permease subunit;protein_id=WP_004105725.1;transl_table=11 NZ_CP116214.1 RefSeq gene 780300 780803 . - . ID=gene-PHA56_RS03760;Name=PHA56_RS03760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS03760;old_locus_tag=PHA56_03760 NZ_CP116214.1 Protein Homology CDS 780300 780803 . - 0 ID=cds-WP_014226842.1;Parent=gene-PHA56_RS03760;Dbxref=Genbank:WP_014226842.1;Name=WP_014226842.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004135834.1;locus_tag=PHA56_RS03760;product=TRAP transporter small permease;protein_id=WP_014226842.1;transl_table=11 NZ_CP116214.1 RefSeq gene 780850 781836 . - . ID=gene-PHA56_RS03765;Name=PHA56_RS03765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS03765;old_locus_tag=PHA56_03765 NZ_CP116214.1 Protein Homology CDS 780850 781836 . - 0 ID=cds-WP_014839537.1;Parent=gene-PHA56_RS03765;Dbxref=Genbank:WP_014839537.1;Name=WP_014839537.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016231167.1;locus_tag=PHA56_RS03765;product=TRAP transporter substrate-binding protein;protein_id=WP_014839537.1;transl_table=11 NZ_CP116214.1 RefSeq gene 782141 783277 . - . ID=gene-PHA56_RS03770;Name=hemW;gbkey=Gene;gene=hemW;gene_biotype=protein_coding;locus_tag=PHA56_RS03770;old_locus_tag=PHA56_03770 NZ_CP116214.1 Protein Homology CDS 782141 783277 . - 0 ID=cds-WP_014226840.1;Parent=gene-PHA56_RS03770;Dbxref=Genbank:WP_014226840.1;Name=WP_014226840.1;Ontology_term=GO:0006779,GO:0051989;gbkey=CDS;gene=hemW;go_function=coproporphyrinogen dehydrogenase activity|0051989||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228759.1;locus_tag=PHA56_RS03770;product=radical SAM family heme chaperone HemW;protein_id=WP_014226840.1;transl_table=11 NZ_CP116214.1 RefSeq gene 783270 783863 . - . ID=gene-PHA56_RS03775;Name=PHA56_RS03775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS03775;old_locus_tag=PHA56_03775 NZ_CP116214.1 Protein Homology CDS 783270 783863 . - 0 ID=cds-WP_004854157.1;Parent=gene-PHA56_RS03775;Dbxref=Genbank:WP_004854157.1;Name=WP_004854157.1;Ontology_term=GO:0009143,GO:0047429;gbkey=CDS;go_function=nucleoside triphosphate diphosphatase activity|0047429||IEA;go_process=nucleoside triphosphate catabolic process|0009143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228758.1;locus_tag=PHA56_RS03775;product=XTP/dITP diphosphatase;protein_id=WP_004854157.1;transl_table=11 NZ_CP116214.1 RefSeq gene 783876 784166 . - . ID=gene-PHA56_RS03780;Name=yggU;gbkey=Gene;gene=yggU;gene_biotype=protein_coding;locus_tag=PHA56_RS03780;old_locus_tag=PHA56_03780 NZ_CP116214.1 Protein Homology CDS 783876 784166 . - 0 ID=cds-WP_271292958.1;Parent=gene-PHA56_RS03780;Dbxref=Genbank:WP_271292958.1;Name=WP_271292958.1;gbkey=CDS;gene=yggU;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228757.1;locus_tag=PHA56_RS03780;product=DUF167 family protein YggU;protein_id=WP_271292958.1;transl_table=11 NZ_CP116214.1 RefSeq gene 784163 784729 . - . ID=gene-PHA56_RS03785;Name=PHA56_RS03785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS03785;old_locus_tag=PHA56_03785 NZ_CP116214.1 Protein Homology CDS 784163 784729 . - 0 ID=cds-WP_004105714.1;Parent=gene-PHA56_RS03785;Dbxref=Genbank:WP_004105714.1;Name=WP_004105714.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462017.1;locus_tag=PHA56_RS03785;product=YggT family protein;protein_id=WP_004105714.1;transl_table=11 NZ_CP116214.1 RefSeq gene 784747 785451 . - . ID=gene-PHA56_RS03790;Name=PHA56_RS03790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS03790;old_locus_tag=PHA56_03790 NZ_CP116214.1 Protein Homology CDS 784747 785451 . - 0 ID=cds-WP_032720266.1;Parent=gene-PHA56_RS03790;Dbxref=Genbank:WP_032720266.1;Name=WP_032720266.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004115386.1;locus_tag=PHA56_RS03790;product=YggS family pyridoxal phosphate-dependent enzyme;protein_id=WP_032720266.1;transl_table=11 NZ_CP116214.1 RefSeq gene 785468 786448 . + . ID=gene-PHA56_RS03795;Name=PHA56_RS03795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS03795;old_locus_tag=PHA56_03795 NZ_CP116214.1 Protein Homology CDS 785468 786448 . + 0 ID=cds-WP_119834385.1;Parent=gene-PHA56_RS03795;Dbxref=Genbank:WP_119834385.1;Name=WP_119834385.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228754.1;locus_tag=PHA56_RS03795;product=type IV pilus twitching motility protein PilT;protein_id=WP_119834385.1;transl_table=11 NZ_CP116214.1 RefSeq gene 786797 787450 . + . ID=gene-PHA56_RS03800;Name=PHA56_RS03800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS03800;old_locus_tag=PHA56_03800 NZ_CP116214.1 Protein Homology CDS 786797 787450 . + 0 ID=cds-WP_014226837.1;Parent=gene-PHA56_RS03800;Dbxref=Genbank:WP_014226837.1;Name=WP_014226837.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228752.1;locus_tag=PHA56_RS03800;product=LuxR C-terminal-related transcriptional regulator;protein_id=WP_014226837.1;transl_table=11 NZ_CP116214.1 RefSeq gene 787506 787922 . - . ID=gene-PHA56_RS03805;Name=ruvX;gbkey=Gene;gene=ruvX;gene_biotype=protein_coding;locus_tag=PHA56_RS03805;old_locus_tag=PHA56_03805 NZ_CP116214.1 Protein Homology CDS 787506 787922 . - 0 ID=cds-WP_014226836.1;Parent=gene-PHA56_RS03805;Dbxref=Genbank:WP_014226836.1;Name=WP_014226836.1;Ontology_term=GO:0008150,GO:0003674,GO:0005737;gbkey=CDS;gene=ruvX;go_component=cytoplasm|0005737||IEA;go_function=molecular_function|0003674||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228751.1;locus_tag=PHA56_RS03805;product=Holliday junction resolvase RuvX;protein_id=WP_014226836.1;transl_table=11 NZ_CP116214.1 RefSeq gene 787922 788485 . - . ID=gene-PHA56_RS03810;Name=PHA56_RS03810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS03810;old_locus_tag=PHA56_03810 NZ_CP116214.1 Protein Homology CDS 787922 788485 . - 0 ID=cds-WP_014226835.1;Parent=gene-PHA56_RS03810;Dbxref=Genbank:WP_014226835.1;Name=WP_014226835.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228750.1;locus_tag=PHA56_RS03810;product=YqgE/AlgH family protein;protein_id=WP_014226835.1;transl_table=11 NZ_CP116214.1 RefSeq gene 788662 789609 . - . ID=gene-PHA56_RS03815;Name=gshB;gbkey=Gene;gene=gshB;gene_biotype=protein_coding;locus_tag=PHA56_RS03815;old_locus_tag=PHA56_03815 NZ_CP116214.1 Protein Homology CDS 788662 789609 . - 0 ID=cds-WP_119834384.1;Parent=gene-PHA56_RS03815;Dbxref=Genbank:WP_119834384.1;Name=WP_119834384.1;Ontology_term=GO:0006750,GO:0004363,GO:0005524,GO:0046872;gbkey=CDS;gene=gshB;go_function=glutathione synthase activity|0004363||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228749.1;locus_tag=PHA56_RS03815;product=glutathione synthase;protein_id=WP_119834384.1;transl_table=11 NZ_CP116214.1 RefSeq gene 789630 790361 . - . ID=gene-PHA56_RS03820;Name=rsmE;gbkey=Gene;gene=rsmE;gene_biotype=protein_coding;locus_tag=PHA56_RS03820;old_locus_tag=PHA56_03820 NZ_CP116214.1 Protein Homology CDS 789630 790361 . - 0 ID=cds-WP_032720268.1;Parent=gene-PHA56_RS03820;Dbxref=Genbank:WP_032720268.1;Name=WP_032720268.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;gene=rsmE;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228748.1;locus_tag=PHA56_RS03820;product=16S rRNA (uracil(1498)-N(3))-methyltransferase;protein_id=WP_032720268.1;transl_table=11 NZ_CP116214.1 RefSeq gene 790453 791160 . - . ID=gene-PHA56_RS03825;Name=endA;gbkey=Gene;gene=endA;gene_biotype=protein_coding;locus_tag=PHA56_RS03825;old_locus_tag=PHA56_03825 NZ_CP116214.1 Protein Homology CDS 790453 791160 . - 0 ID=cds-WP_014226832.1;Parent=gene-PHA56_RS03825;Dbxref=Genbank:WP_014226832.1;Name=WP_014226832.1;Ontology_term=GO:0004518;gbkey=CDS;gene=endA;go_function=nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228747.1;locus_tag=PHA56_RS03825;product=deoxyribonuclease I;protein_id=WP_014226832.1;transl_table=11 NZ_CP116214.1 RefSeq gene 791255 791755 . - . ID=gene-PHA56_RS03830;Name=PHA56_RS03830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS03830;old_locus_tag=PHA56_03830 NZ_CP116214.1 Protein Homology CDS 791255 791755 . - 0 ID=cds-WP_014226831.1;Parent=gene-PHA56_RS03830;Dbxref=Genbank:WP_014226831.1;Name=WP_014226831.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228746.1;locus_tag=PHA56_RS03830;product=SprT family zinc-dependent metalloprotease;protein_id=WP_014226831.1;transl_table=11 NZ_CP116214.1 RefSeq gene 791831 793225 . - . ID=gene-PHA56_RS03835;Name=PHA56_RS03835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS03835;old_locus_tag=PHA56_03835 NZ_CP116214.1 Protein Homology CDS 791831 793225 . - 0 ID=cds-WP_004854145.1;Parent=gene-PHA56_RS03835;Dbxref=Genbank:WP_004854145.1;Name=WP_004854145.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228745.1;locus_tag=PHA56_RS03835;product=sugar porter family MFS transporter;protein_id=WP_004854145.1;transl_table=11 NZ_CP116214.1 RefSeq gene 793604 794758 . - . ID=gene-PHA56_RS03840;Name=metK;gbkey=Gene;gene=metK;gene_biotype=protein_coding;locus_tag=PHA56_RS03840;old_locus_tag=PHA56_03840 NZ_CP116214.1 Protein Homology CDS 793604 794758 . - 0 ID=cds-WP_014226830.1;Parent=gene-PHA56_RS03840;Dbxref=Genbank:WP_014226830.1;Name=WP_014226830.1;Ontology_term=GO:0006556,GO:0004478;gbkey=CDS;gene=metK;go_function=methionine adenosyltransferase activity|0004478||IEA;go_process=S-adenosylmethionine biosynthetic process|0006556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123306.1;locus_tag=PHA56_RS03840;product=methionine adenosyltransferase;protein_id=WP_014226830.1;transl_table=11 NZ_CP116214.1 RefSeq gene 795226 795375 . + . ID=gene-PHA56_RS03845;Name=PHA56_RS03845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS03845;old_locus_tag=PHA56_03845 NZ_CP116214.1 Protein Homology CDS 795226 795375 . + 0 ID=cds-WP_155774231.1;Parent=gene-PHA56_RS03845;Dbxref=Genbank:WP_155774231.1;Name=WP_155774231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051195.1;locus_tag=PHA56_RS03845;product=hypothetical protein;protein_id=WP_155774231.1;transl_table=11 NZ_CP116214.1 RefSeq gene 795461 795592 . + . ID=gene-PHA56_RS03850;Name=yqgB;gbkey=Gene;gene=yqgB;gene_biotype=protein_coding;locus_tag=PHA56_RS03850;old_locus_tag=PHA56_03850 NZ_CP116214.1 Protein Homology CDS 795461 795592 . + 0 ID=cds-WP_075210876.1;Parent=gene-PHA56_RS03850;Dbxref=Genbank:WP_075210876.1;Name=WP_075210876.1;gbkey=CDS;gene=yqgB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003027062.1;locus_tag=PHA56_RS03850;product=acid stress response protein YqgB;protein_id=WP_075210876.1;transl_table=11 NZ_CP116214.1 RefSeq gene 795601 797577 . + . ID=gene-PHA56_RS03855;Name=speA;gbkey=Gene;gene=speA;gene_biotype=protein_coding;locus_tag=PHA56_RS03855;old_locus_tag=PHA56_03855 NZ_CP116214.1 Protein Homology CDS 795601 797577 . + 0 ID=cds-WP_071889085.1;Parent=gene-PHA56_RS03855;Dbxref=Genbank:WP_071889085.1;Name=WP_071889085.1;Ontology_term=GO:0006527,GO:0008792;gbkey=CDS;gene=speA;go_function=arginine decarboxylase activity|0008792||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311841.1;locus_tag=PHA56_RS03855;product=biosynthetic arginine decarboxylase;protein_id=WP_071889085.1;transl_table=11 NZ_CP116214.1 RefSeq gene 797789 798709 . + . ID=gene-PHA56_RS03860;Name=speB;gbkey=Gene;gene=speB;gene_biotype=protein_coding;locus_tag=PHA56_RS03860;old_locus_tag=PHA56_03860 NZ_CP116214.1 Protein Homology CDS 797789 798709 . + 0 ID=cds-WP_004205166.1;Parent=gene-PHA56_RS03860;Dbxref=Genbank:WP_004205166.1;Name=WP_004205166.1;Ontology_term=GO:0008295,GO:0008783;gbkey=CDS;gene=speB;go_function=agmatinase activity|0008783||IEA;go_process=spermidine biosynthetic process|0008295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008499737.1;locus_tag=PHA56_RS03860;product=agmatinase;protein_id=WP_004205166.1;transl_table=11 NZ_CP116214.1 RefSeq gene 798877 799635 . - . ID=gene-PHA56_RS03865;Name=PHA56_RS03865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS03865;old_locus_tag=PHA56_03865 NZ_CP116214.1 Protein Homology CDS 798877 799635 . - 0 ID=cds-WP_032692845.1;Parent=gene-PHA56_RS03865;Dbxref=Genbank:WP_032692845.1;Name=WP_032692845.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461993.1;locus_tag=PHA56_RS03865;product=M48 family metallopeptidase;protein_id=WP_032692845.1;transl_table=11 NZ_CP116214.1 RefSeq gene 799915 801906 . + . ID=gene-PHA56_RS03870;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=PHA56_RS03870;old_locus_tag=PHA56_03870 NZ_CP116214.1 Protein Homology CDS 799915 801906 . + 0 ID=cds-WP_076752389.1;Parent=gene-PHA56_RS03870;Dbxref=Genbank:WP_076752389.1;Name=WP_076752389.1;Ontology_term=GO:0006098,GO:0004802,GO:0005737;gbkey=CDS;gene=tkt;go_component=cytoplasm|0005737||IEA;go_function=transketolase activity|0004802||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228723.1;locus_tag=PHA56_RS03870;product=transketolase;protein_id=WP_076752389.1;transl_table=11 NZ_CP116214.1 RefSeq gene 802036 802692 . - . ID=gene-PHA56_RS03875;Name=PHA56_RS03875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS03875;old_locus_tag=PHA56_03875 NZ_CP116214.1 Protein Homology CDS 802036 802692 . - 0 ID=cds-WP_076752388.1;Parent=gene-PHA56_RS03875;Dbxref=Genbank:WP_076752388.1;Name=WP_076752388.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017145440.1;locus_tag=PHA56_RS03875;product=ATP-binding cassette domain-containing protein;protein_id=WP_076752388.1;transl_table=11 NZ_CP116214.1 RefSeq gene 802686 803363 . - . ID=gene-PHA56_RS03880;Name=PHA56_RS03880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS03880;old_locus_tag=PHA56_03880 NZ_CP116214.1 Protein Homology CDS 802686 803363 . - 0 ID=cds-WP_032720077.1;Parent=gene-PHA56_RS03880;Dbxref=Genbank:WP_032720077.1;Name=WP_032720077.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311829.1;locus_tag=PHA56_RS03880;product=energy-coupling factor ABC transporter ATP-binding protein;protein_id=WP_032720077.1;transl_table=11 NZ_CP116214.1 RefSeq gene 803351 804058 . - . ID=gene-PHA56_RS03885;Name=PHA56_RS03885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS03885;old_locus_tag=PHA56_03885 NZ_CP116214.1 Protein Homology CDS 803351 804058 . - 0 ID=cds-WP_032720078.1;Parent=gene-PHA56_RS03885;Dbxref=Genbank:WP_032720078.1;Name=WP_032720078.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461989.1;locus_tag=PHA56_RS03885;product=energy-coupling factor transporter transmembrane component T;protein_id=WP_032720078.1;transl_table=11 NZ_CP116214.1 RefSeq gene 804058 804636 . - . ID=gene-PHA56_RS03890;Name=PHA56_RS03890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS03890;old_locus_tag=PHA56_03890 NZ_CP116214.1 Protein Homology CDS 804058 804636 . - 0 ID=cds-WP_014226821.1;Parent=gene-PHA56_RS03890;Dbxref=Genbank:WP_014226821.1;Name=WP_014226821.1;Ontology_term=GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461988.1;locus_tag=PHA56_RS03890;product=ECF transporter S component;protein_id=WP_014226821.1;transl_table=11 NZ_CP116214.1 RefSeq gene 804660 805085 . - . ID=gene-PHA56_RS03895;Name=PHA56_RS03895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS03895;old_locus_tag=PHA56_03895 NZ_CP116214.1 Protein Homology CDS 804660 805085 . - 0 ID=cds-WP_032693818.1;Parent=gene-PHA56_RS03895;Dbxref=Genbank:WP_032693818.1;Name=WP_032693818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461987.1;locus_tag=PHA56_RS03895;product=DNA-binding protein;protein_id=WP_032693818.1;transl_table=11 NZ_CP116214.1 RefSeq gene 805462 806481 . + . ID=gene-PHA56_RS03900;Name=epd;gbkey=Gene;gene=epd;gene_biotype=protein_coding;locus_tag=PHA56_RS03900;old_locus_tag=PHA56_03900 NZ_CP116214.1 Protein Homology CDS 805462 806481 . + 0 ID=cds-WP_014226819.1;Parent=gene-PHA56_RS03900;Dbxref=Genbank:WP_014226819.1;Name=WP_014226819.1;Ontology_term=GO:0042823,GO:0048001,GO:0051287;gbkey=CDS;gene=epd;go_function=erythrose-4-phosphate dehydrogenase activity|0048001||IEA,NAD binding|0051287||IEA;go_process=pyridoxal phosphate biosynthetic process|0042823||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311825.1;locus_tag=PHA56_RS03900;product=erythrose-4-phosphate dehydrogenase;protein_id=WP_014226819.1;transl_table=11 NZ_CP116214.1 RefSeq gene 806533 807696 . + . ID=gene-PHA56_RS03905;Name=pgk;gbkey=Gene;gene=pgk;gene_biotype=protein_coding;locus_tag=PHA56_RS03905;old_locus_tag=PHA56_03905 NZ_CP116214.1 Protein Homology CDS 806533 807696 . + 0 ID=cds-WP_014226818.1;Parent=gene-PHA56_RS03905;Dbxref=Genbank:WP_014226818.1;Name=WP_014226818.1;gbkey=CDS;gene=pgk;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005761248.1;locus_tag=PHA56_RS03905;product=phosphoglycerate kinase;protein_id=WP_014226818.1;transl_table=11 NZ_CP116214.1 RefSeq gene 807794 808873 . + . ID=gene-PHA56_RS03910;Name=fbaA;gbkey=Gene;gene=fbaA;gene_biotype=protein_coding;locus_tag=PHA56_RS03910;old_locus_tag=PHA56_03910 NZ_CP116214.1 Protein Homology CDS 807794 808873 . + 0 ID=cds-WP_009654956.1;Parent=gene-PHA56_RS03910;Dbxref=Genbank:WP_009654956.1;Name=WP_009654956.1;Ontology_term=GO:0005975,GO:0006096,GO:0004332,GO:0008270;gbkey=CDS;gene=fbaA;go_function=fructose-bisphosphate aldolase activity|0004332||IEA,zinc ion binding|0008270||IEA;go_process=carbohydrate metabolic process|0005975||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016505616.1;locus_tag=PHA56_RS03910;product=class II fructose-bisphosphate aldolase;protein_id=WP_009654956.1;transl_table=11 NZ_CP116214.1 RefSeq gene 809062 809919 . + . ID=gene-PHA56_RS03915;Name=PHA56_RS03915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS03915;old_locus_tag=PHA56_03915 NZ_CP116214.1 Protein Homology CDS 809062 809919 . + 0 ID=cds-WP_014839522.1;Parent=gene-PHA56_RS03915;Dbxref=Genbank:WP_014839522.1;Name=WP_014839522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228719.1;locus_tag=PHA56_RS03915;product=small-conductance mechanosensitive channel MscS;protein_id=WP_014839522.1;transl_table=11 NZ_CP116214.1 RefSeq gene 810069 810704 . + . ID=gene-PHA56_RS03920;Name=argO;gbkey=Gene;gene=argO;gene_biotype=protein_coding;locus_tag=PHA56_RS03920;old_locus_tag=PHA56_03920 NZ_CP116214.1 Protein Homology CDS 810069 810704 . + 0 ID=cds-WP_032693817.1;Parent=gene-PHA56_RS03920;Dbxref=Genbank:WP_032693817.1;Name=WP_032693817.1;Ontology_term=GO:1903826,GO:0061459,GO:0016020;gbkey=CDS;gene=argO;go_component=membrane|0016020||IEA;go_function=L-arginine transmembrane transporter activity|0061459||IEA;go_process=L-arginine transmembrane transport|1903826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461982.1;locus_tag=PHA56_RS03920;product=arginine exporter ArgO;protein_id=WP_032693817.1;transl_table=11 NZ_CP116214.1 RefSeq gene 810795 811562 . + . ID=gene-PHA56_RS03925;Name=PHA56_RS03925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS03925;old_locus_tag=PHA56_03925 NZ_CP116214.1 Protein Homology CDS 810795 811562 . + 0 ID=cds-WP_014226815.1;Parent=gene-PHA56_RS03925;Dbxref=Genbank:WP_014226815.1;Name=WP_014226815.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228716.1;locus_tag=PHA56_RS03925;product=oxidative stress defense protein;protein_id=WP_014226815.1;transl_table=11 NZ_CP116214.1 RefSeq gene 811683 812579 . + . ID=gene-PHA56_RS03930;Name=PHA56_RS03930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS03930;old_locus_tag=PHA56_03930 NZ_CP116214.1 Protein Homology CDS 811683 812579 . + 0 ID=cds-WP_014226814.1;Parent=gene-PHA56_RS03930;Dbxref=Genbank:WP_014226814.1;Name=WP_014226814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004854110.1;locus_tag=PHA56_RS03930;product=LysR family transcriptional regulator;protein_id=WP_014226814.1;transl_table=11 NZ_CP116214.1 RefSeq gene 812576 814042 . - . ID=gene-PHA56_RS03935;Name=PHA56_RS03935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS03935;old_locus_tag=PHA56_03935 NZ_CP116214.1 Protein Homology CDS 812576 814042 . - 0 ID=cds-WP_014226813.1;Parent=gene-PHA56_RS03935;Dbxref=Genbank:WP_014226813.1;Name=WP_014226813.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818384.1;locus_tag=PHA56_RS03935;product=acetyl-CoA hydrolase/transferase family protein;protein_id=WP_014226813.1;transl_table=11 NZ_CP116214.1 RefSeq gene 814067 814852 . - . ID=gene-PHA56_RS03940;Name=scpB;gbkey=Gene;gene=scpB;gene_biotype=protein_coding;locus_tag=PHA56_RS03940;old_locus_tag=PHA56_03940 NZ_CP116214.1 Protein Homology CDS 814067 814852 . - 0 ID=cds-WP_032693816.1;Parent=gene-PHA56_RS03940;Dbxref=Genbank:WP_032693816.1;Name=WP_032693816.1;gbkey=CDS;gene=scpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311816.2;locus_tag=PHA56_RS03940;product=methylmalonyl-CoA decarboxylase;protein_id=WP_032693816.1;transl_table=11 NZ_CP116214.1 RefSeq gene 814863 815858 . - . ID=gene-PHA56_RS03945;Name=meaB;gbkey=Gene;gene=meaB;gene_biotype=protein_coding;locus_tag=PHA56_RS03945;old_locus_tag=PHA56_03945 NZ_CP116214.1 Protein Homology CDS 814863 815858 . - 0 ID=cds-WP_032720079.1;Parent=gene-PHA56_RS03945;Dbxref=Genbank:WP_032720079.1;Name=WP_032720079.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=meaB;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014839520.1;locus_tag=PHA56_RS03945;product=methylmalonyl Co-A mutase-associated GTPase MeaB;protein_id=WP_032720079.1;transl_table=11 NZ_CP116214.1 RefSeq gene 815851 817995 . - . ID=gene-PHA56_RS03950;Name=scpA;gbkey=Gene;gene=scpA;gene_biotype=protein_coding;locus_tag=PHA56_RS03950;old_locus_tag=PHA56_03950 NZ_CP116214.1 Protein Homology CDS 815851 817995 . - 0 ID=cds-WP_032720080.1;Parent=gene-PHA56_RS03950;Dbxref=Genbank:WP_032720080.1;Name=WP_032720080.1;Ontology_term=GO:0004494,GO:0046872;gbkey=CDS;gene=scpA;go_function=methylmalonyl-CoA mutase activity|0004494||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417392.1;locus_tag=PHA56_RS03950;product=methylmalonyl-CoA mutase;protein_id=WP_032720080.1;transl_table=11 NZ_CP116214.1 RefSeq gene 818194 819087 . - . ID=gene-PHA56_RS03955;Name=argP;gbkey=Gene;gene=argP;gene_biotype=protein_coding;locus_tag=PHA56_RS03955;old_locus_tag=PHA56_03955 NZ_CP116214.1 Protein Homology CDS 818194 819087 . - 0 ID=cds-WP_004105608.1;Parent=gene-PHA56_RS03955;Dbxref=Genbank:WP_004105608.1;Name=WP_004105608.1;gbkey=CDS;gene=argP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228715.1;locus_tag=PHA56_RS03955;product=DNA-binding transcriptional regulator ArgP;protein_id=WP_004105608.1;transl_table=11 NZ_CP116214.1 RefSeq gene 819257 819916 . + . ID=gene-PHA56_RS03960;Name=rpiA;gbkey=Gene;gene=rpiA;gene_biotype=protein_coding;locus_tag=PHA56_RS03960;old_locus_tag=PHA56_03960 NZ_CP116214.1 Protein Homology CDS 819257 819916 . + 0 ID=cds-WP_004125006.1;Parent=gene-PHA56_RS03960;Dbxref=Genbank:WP_004125006.1;Name=WP_004125006.1;Ontology_term=GO:0009052,GO:0004751;gbkey=CDS;gene=rpiA;go_function=ribose-5-phosphate isomerase activity|0004751||IEA;go_process=pentose-phosphate shunt%2C non-oxidative branch|0009052||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228714.1;locus_tag=PHA56_RS03960;product=ribose-5-phosphate isomerase RpiA;protein_id=WP_004125006.1;transl_table=11 NZ_CP116214.1 RefSeq gene 820186 821418 . + . ID=gene-PHA56_RS03965;Name=serA;gbkey=Gene;gene=serA;gene_biotype=protein_coding;locus_tag=PHA56_RS03965;old_locus_tag=PHA56_03965 NZ_CP116214.1 Protein Homology CDS 820186 821418 . + 0 ID=cds-WP_004115297.1;Parent=gene-PHA56_RS03965;Dbxref=Genbank:WP_004115297.1;Name=WP_004115297.1;Ontology_term=GO:0016616,GO:0051287;gbkey=CDS;gene=serA;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228712.1;locus_tag=PHA56_RS03965;product=phosphoglycerate dehydrogenase;protein_id=WP_004115297.1;transl_table=11 NZ_CP116214.1 RefSeq gene 821796 822392 . - . ID=gene-PHA56_RS03970;Name=PHA56_RS03970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS03970;old_locus_tag=PHA56_03970 NZ_CP116214.1 Protein Homology CDS 821796 822392 . - 0 ID=cds-WP_032720082.1;Parent=gene-PHA56_RS03970;Dbxref=Genbank:WP_032720082.1;Name=WP_032720082.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228711.1;locus_tag=PHA56_RS03970;product=5-formyltetrahydrofolate cyclo-ligase;protein_id=WP_032720082.1;transl_table=11 NZ_CP116214.1 RefSeq gene 822494 822677 . - . ID=gene-PHA56_RS03975;Name=ssrS;gbkey=Gene;gene=ssrS;gene_biotype=ncRNA;locus_tag=PHA56_RS03975;old_locus_tag=PHA56_03975 NZ_CP116214.1 cmsearch ncRNA 822494 822677 . - . ID=rna-PHA56_RS03975;Parent=gene-PHA56_RS03975;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA56_RS03975;product=6S RNA NZ_CP116214.1 cmsearch exon 822494 822677 . - . ID=exon-PHA56_RS03975-1;Parent=rna-PHA56_RS03975;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA56_RS03975;product=6S RNA NZ_CP116214.1 RefSeq gene 822719 823048 . - . ID=gene-PHA56_RS03980;Name=zapA;gbkey=Gene;gene=zapA;gene_biotype=protein_coding;locus_tag=PHA56_RS03980;old_locus_tag=PHA56_03980 NZ_CP116214.1 Protein Homology CDS 822719 823048 . - 0 ID=cds-WP_004105598.1;Parent=gene-PHA56_RS03980;Dbxref=Genbank:WP_004105598.1;Name=WP_004105598.1;gbkey=CDS;gene=zapA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311808.1;locus_tag=PHA56_RS03980;product=cell division protein ZapA;protein_id=WP_004105598.1;transl_table=11 NZ_CP116214.1 RefSeq gene 823214 823792 . + . ID=gene-PHA56_RS03985;Name=PHA56_RS03985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS03985;old_locus_tag=PHA56_03985 NZ_CP116214.1 Protein Homology CDS 823214 823792 . + 0 ID=cds-WP_004133578.1;Parent=gene-PHA56_RS03985;Dbxref=Genbank:WP_004133578.1;Name=WP_004133578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708672.2;locus_tag=PHA56_RS03985;product=YecA family protein;protein_id=WP_004133578.1;transl_table=11 NZ_CP116214.1 RefSeq gene 823821 825134 . + . ID=gene-PHA56_RS03990;Name=pepP;gbkey=Gene;gene=pepP;gene_biotype=protein_coding;locus_tag=PHA56_RS03990;old_locus_tag=PHA56_03990 NZ_CP116214.1 Protein Homology CDS 823821 825134 . + 0 ID=cds-WP_038423614.1;Parent=gene-PHA56_RS03990;Dbxref=Genbank:WP_038423614.1;Name=WP_038423614.1;Ontology_term=GO:0070006;gbkey=CDS;gene=pepP;go_function=metalloaminopeptidase activity|0070006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226807.1;locus_tag=PHA56_RS03990;product=Xaa-Pro aminopeptidase;protein_id=WP_038423614.1;transl_table=11 NZ_CP116214.1 RefSeq gene 825131 826309 . + . ID=gene-PHA56_RS03995;Name=ubiH;gbkey=Gene;gene=ubiH;gene_biotype=protein_coding;gene_synonym=visB;locus_tag=PHA56_RS03995;old_locus_tag=PHA56_03995 NZ_CP116214.1 Protein Homology CDS 825131 826309 . + 0 ID=cds-WP_038423612.1;Parent=gene-PHA56_RS03995;Dbxref=Genbank:WP_038423612.1;Name=WP_038423612.1;Ontology_term=GO:0006744,GO:0008681,GO:0016709,GO:0071949;gbkey=CDS;gene=ubiH;go_function=2-octaprenyl-6-methoxyphenol hydroxylase activity|0008681||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA,FAD binding|0071949||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228708.1;locus_tag=PHA56_RS03995;product=2-octaprenyl-6-methoxyphenyl hydroxylase;protein_id=WP_038423612.1;transl_table=11 NZ_CP116214.1 RefSeq gene 826320 827522 . + . ID=gene-PHA56_RS04000;Name=ubiI;gbkey=Gene;gene=ubiI;gene_biotype=protein_coding;gene_synonym=visC;locus_tag=PHA56_RS04000;old_locus_tag=PHA56_04000 NZ_CP116214.1 Protein Homology CDS 826320 827522 . + 0 ID=cds-WP_004854091.1;Parent=gene-PHA56_RS04000;Dbxref=Genbank:WP_004854091.1;Name=WP_004854091.1;Ontology_term=GO:0006744,GO:0016709,GO:0071949;gbkey=CDS;gene=ubiI;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA,FAD binding|0071949||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228707.1;locus_tag=PHA56_RS04000;product=FAD-dependent 2-octaprenylphenol hydroxylase;protein_id=WP_004854091.1;transl_table=11 NZ_CP116214.1 RefSeq gene 827944 829038 . + . ID=gene-PHA56_RS04005;Name=gcvT;gbkey=Gene;gene=gcvT;gene_biotype=protein_coding;locus_tag=PHA56_RS04005;old_locus_tag=PHA56_04005 NZ_CP116214.1 Protein Homology CDS 827944 829038 . + 0 ID=cds-WP_009654955.1;Parent=gene-PHA56_RS04005;Dbxref=Genbank:WP_009654955.1;Name=WP_009654955.1;Ontology_term=GO:0019464,GO:0004047,GO:0005737;gbkey=CDS;gene=gcvT;go_component=cytoplasm|0005737||IEA;go_function=aminomethyltransferase activity|0004047||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228706.1;locus_tag=PHA56_RS04005;product=glycine cleavage system aminomethyltransferase GcvT;protein_id=WP_009654955.1;transl_table=11 NZ_CP116214.1 RefSeq gene 829061 829450 . + . ID=gene-PHA56_RS04010;Name=gcvH;gbkey=Gene;gene=gcvH;gene_biotype=protein_coding;locus_tag=PHA56_RS04010;old_locus_tag=PHA56_04010 NZ_CP116214.1 Protein Homology CDS 829061 829450 . + 0 ID=cds-WP_004854088.1;Parent=gene-PHA56_RS04010;Dbxref=Genbank:WP_004854088.1;Name=WP_004854088.1;Ontology_term=GO:0019464,GO:0003824;gbkey=CDS;gene=gcvH;go_function=catalytic activity|0003824||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123344.1;locus_tag=PHA56_RS04010;product=glycine cleavage system protein GcvH;protein_id=WP_004854088.1;transl_table=11 NZ_CP116214.1 RefSeq gene 829594 832467 . + . ID=gene-PHA56_RS04015;Name=gcvP;gbkey=Gene;gene=gcvP;gene_biotype=protein_coding;locus_tag=PHA56_RS04015;old_locus_tag=PHA56_04015 NZ_CP116214.1 Protein Homology CDS 829594 832467 . + 0 ID=cds-WP_014839514.1;Parent=gene-PHA56_RS04015;Dbxref=Genbank:WP_014839514.1;Name=WP_014839514.1;Ontology_term=GO:0019464,GO:0004375;gbkey=CDS;gene=gcvP;go_function=glycine dehydrogenase (decarboxylating) activity|0004375||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017457610.1;locus_tag=PHA56_RS04015;product=aminomethyl-transferring glycine dehydrogenase;protein_id=WP_014839514.1;transl_table=11 NZ_CP116214.1 RefSeq gene 832528 833271 . + . ID=gene-PHA56_RS04020;Name=PHA56_RS04020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04020;old_locus_tag=PHA56_04020 NZ_CP116214.1 Protein Homology CDS 832528 833271 . + 0 ID=cds-WP_025105965.1;Parent=gene-PHA56_RS04020;Dbxref=Genbank:WP_025105965.1;Name=WP_025105965.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228703.1;locus_tag=PHA56_RS04020;product=SDR family oxidoreductase;protein_id=WP_025105965.1;transl_table=11 NZ_CP116214.1 RefSeq gene 833380 833871 . - . ID=gene-PHA56_RS04025;Name=PHA56_RS04025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04025;old_locus_tag=PHA56_04025 NZ_CP116214.1 Protein Homology CDS 833380 833871 . - 0 ID=cds-WP_004854083.1;Parent=gene-PHA56_RS04025;Dbxref=Genbank:WP_004854083.1;Name=WP_004854083.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004124982.1;locus_tag=PHA56_RS04025;product=protein disulfide oxidoreductase;protein_id=WP_004854083.1;transl_table=11 NZ_CP116214.1 RefSeq gene 834062 835495 . - . ID=gene-PHA56_RS04030;Name=bglA;gbkey=Gene;gene=bglA;gene_biotype=protein_coding;locus_tag=PHA56_RS04030;old_locus_tag=PHA56_04030 NZ_CP116214.1 Protein Homology CDS 834062 835495 . - 0 ID=cds-WP_042946034.1;Parent=gene-PHA56_RS04030;Dbxref=Genbank:WP_042946034.1;Name=WP_042946034.1;gbkey=CDS;gene=bglA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228698.1;locus_tag=PHA56_RS04030;product=6-phospho-beta-glucosidase BglA;protein_id=WP_042946034.1;transl_table=11 NZ_CP116214.1 RefSeq gene 835617 836345 . - . ID=gene-PHA56_RS04035;Name=PHA56_RS04035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04035;old_locus_tag=PHA56_04035 NZ_CP116214.1 Protein Homology CDS 835617 836345 . - 0 ID=cds-WP_025105967.1;Parent=gene-PHA56_RS04035;Dbxref=Genbank:WP_025105967.1;Name=WP_025105967.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228697.1;locus_tag=PHA56_RS04035;product=MurR/RpiR family transcriptional regulator;protein_id=WP_025105967.1;transl_table=11 NZ_CP116214.1 RefSeq gene 836396 836707 . + . ID=gene-PHA56_RS04040;Name=yqfB;gbkey=Gene;gene=yqfB;gene_biotype=protein_coding;locus_tag=PHA56_RS04040;old_locus_tag=PHA56_04040 NZ_CP116214.1 Protein Homology CDS 836396 836707 . + 0 ID=cds-WP_014839510.1;Parent=gene-PHA56_RS04040;Dbxref=Genbank:WP_014839510.1;Name=WP_014839510.1;gbkey=CDS;gene=yqfB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228696.1;locus_tag=PHA56_RS04040;product=N(4)-acetylcytidine aminohydrolase;protein_id=WP_014839510.1;transl_table=11 NZ_CP116214.1 RefSeq gene 836869 837528 . + . ID=gene-PHA56_RS04045;Name=PHA56_RS04045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04045;old_locus_tag=PHA56_04045 NZ_CP116214.1 Protein Homology CDS 836869 837528 . + 0 ID=cds-WP_014839509.1;Parent=gene-PHA56_RS04045;Dbxref=Genbank:WP_014839509.1;Name=WP_014839509.1;Ontology_term=GO:0019835;gbkey=CDS;go_process=cytolysis|0019835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003863433.1;locus_tag=PHA56_RS04045;product=hemolysin III family protein;protein_id=WP_014839509.1;transl_table=11 NZ_CP116214.1 RefSeq gene 837688 838431 . - . ID=gene-PHA56_RS04050;Name=PHA56_RS04050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04050;old_locus_tag=PHA56_04050 NZ_CP116214.1 Protein Homology CDS 837688 838431 . - 0 ID=cds-WP_032693811.1;Parent=gene-PHA56_RS04050;Dbxref=Genbank:WP_032693811.1;Name=WP_032693811.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462666.1;locus_tag=PHA56_RS04050;product=2-dehydro-3-deoxy-phosphogluconate aldolase;protein_id=WP_032693811.1;transl_table=11 NZ_CP116214.1 RefSeq gene 838418 839527 . - . ID=gene-PHA56_RS04055;Name=dgaE;gbkey=Gene;gene=dgaE;gene_biotype=protein_coding;locus_tag=PHA56_RS04055;old_locus_tag=PHA56_04055 NZ_CP116214.1 Protein Homology CDS 838418 839527 . - 0 ID=cds-WP_032693810.1;Parent=gene-PHA56_RS04055;Dbxref=Genbank:WP_032693810.1;Name=WP_032693810.1;gbkey=CDS;gene=dgaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462667.1;locus_tag=PHA56_RS04055;product=D-glucosaminate-6-phosphate ammonia lyase;protein_id=WP_032693810.1;transl_table=11 NZ_CP116214.1 RefSeq gene 839531 840391 . - . ID=gene-PHA56_RS04060;Name=PHA56_RS04060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04060;old_locus_tag=PHA56_04060 NZ_CP116214.1 Protein Homology CDS 839531 840391 . - 0 ID=cds-WP_014839507.1;Parent=gene-PHA56_RS04060;Dbxref=Genbank:WP_014839507.1;Name=WP_014839507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462668.3;locus_tag=PHA56_RS04060;product=PTS system mannose/fructose/sorbose family transporter subunit IID;protein_id=WP_014839507.1;transl_table=11 NZ_CP116214.1 RefSeq gene 840388 841137 . - . ID=gene-PHA56_RS04065;Name=PHA56_RS04065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04065;old_locus_tag=PHA56_04065 NZ_CP116214.1 Protein Homology CDS 840388 841137 . - 0 ID=cds-WP_004124968.1;Parent=gene-PHA56_RS04065;Dbxref=Genbank:WP_004124968.1;Name=WP_004124968.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462669.1;locus_tag=PHA56_RS04065;product=PTS sugar transporter subunit IIC;protein_id=WP_004124968.1;transl_table=11 NZ_CP116214.1 RefSeq gene 841163 841648 . - . ID=gene-PHA56_RS04070;Name=PHA56_RS04070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04070;old_locus_tag=PHA56_04070 NZ_CP116214.1 Protein Homology CDS 841163 841648 . - 0 ID=cds-WP_032693808.1;Parent=gene-PHA56_RS04070;Dbxref=Genbank:WP_032693808.1;Name=WP_032693808.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462670.1;locus_tag=PHA56_RS04070;product=PTS system mannose/fructose/N-acetylgalactosamine-transporter subunit IIB;protein_id=WP_032693808.1;transl_table=11 NZ_CP116214.1 RefSeq gene 841661 842086 . - . ID=gene-PHA56_RS04075;Name=PHA56_RS04075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04075;old_locus_tag=PHA56_04075 NZ_CP116214.1 Protein Homology CDS 841661 842086 . - 0 ID=cds-WP_032720093.1;Parent=gene-PHA56_RS04075;Dbxref=Genbank:WP_032720093.1;Name=WP_032720093.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003840671.1;locus_tag=PHA56_RS04075;product=PTS sugar transporter subunit IIA;protein_id=WP_032720093.1;transl_table=11 NZ_CP116214.1 RefSeq gene 842207 845005 . - . ID=gene-PHA56_RS04080;Name=dagR;gbkey=Gene;gene=dagR;gene_biotype=protein_coding;locus_tag=PHA56_RS04080;old_locus_tag=PHA56_04080 NZ_CP116214.1 Protein Homology CDS 842207 845005 . - 0 ID=cds-WP_014226794.1;Parent=gene-PHA56_RS04080;Dbxref=Genbank:WP_014226794.1;Name=WP_014226794.1;gbkey=CDS;gene=dagR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226794.1;locus_tag=PHA56_RS04080;product=transcriptional regulator DagR;protein_id=WP_014226794.1;transl_table=11 NZ_CP116214.1 RefSeq gene 845199 846182 . - . ID=gene-PHA56_RS04085;Name=ygfZ;gbkey=Gene;gene=ygfZ;gene_biotype=protein_coding;locus_tag=PHA56_RS04085;old_locus_tag=PHA56_04085 NZ_CP116214.1 Protein Homology CDS 845199 846182 . - 0 ID=cds-WP_032720095.1;Parent=gene-PHA56_RS04085;Dbxref=Genbank:WP_032720095.1;Name=WP_032720095.1;Ontology_term=GO:0009451,GO:0005542;gbkey=CDS;gene=ygfZ;go_function=folic acid binding|0005542||IEA;go_process=RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228694.1;locus_tag=PHA56_RS04085;product=tRNA-modifying protein YgfZ;protein_id=WP_032720095.1;transl_table=11 NZ_CP116214.1 RefSeq gene 846427 846693 . + . ID=gene-PHA56_RS04090;Name=sdhE;gbkey=Gene;gene=sdhE;gene_biotype=protein_coding;locus_tag=PHA56_RS04090;old_locus_tag=PHA56_04090 NZ_CP116214.1 Protein Homology CDS 846427 846693 . + 0 ID=cds-WP_004124953.1;Parent=gene-PHA56_RS04090;Dbxref=Genbank:WP_004124953.1;Name=WP_004124953.1;gbkey=CDS;gene=sdhE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000354044.1;locus_tag=PHA56_RS04090;product=FAD assembly factor SdhE;protein_id=WP_004124953.1;transl_table=11 NZ_CP116214.1 RefSeq gene 846674 847084 . + . ID=gene-PHA56_RS04095;Name=PHA56_RS04095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04095;old_locus_tag=PHA56_04095 NZ_CP116214.1 Protein Homology CDS 846674 847084 . + 0 ID=cds-WP_004854060.1;Parent=gene-PHA56_RS04095;Dbxref=Genbank:WP_004854060.1;Name=WP_004854060.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228692.1;locus_tag=PHA56_RS04095;product=protein YgfX;protein_id=WP_004854060.1;transl_table=11 NZ_CP116214.1 RefSeq gene 847093 847614 . - . ID=gene-PHA56_RS04100;Name=fldB;gbkey=Gene;gene=fldB;gene_biotype=protein_coding;locus_tag=PHA56_RS04100;old_locus_tag=PHA56_04100 NZ_CP116214.1 Protein Homology CDS 847093 847614 . - 0 ID=cds-WP_014226792.1;Parent=gene-PHA56_RS04100;Dbxref=Genbank:WP_014226792.1;Name=WP_014226792.1;Ontology_term=GO:0009055,GO:0010181;gbkey=CDS;gene=fldB;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228691.1;locus_tag=PHA56_RS04100;product=flavodoxin FldB;protein_id=WP_014226792.1;transl_table=11 NZ_CP116214.1 RefSeq gene 847736 848632 . + . ID=gene-PHA56_RS04105;Name=xerD;gbkey=Gene;gene=xerD;gene_biotype=protein_coding;locus_tag=PHA56_RS04105;old_locus_tag=PHA56_04105 NZ_CP116214.1 Protein Homology CDS 847736 848632 . + 0 ID=cds-WP_004105555.1;Parent=gene-PHA56_RS04105;Dbxref=Genbank:WP_004105555.1;Name=WP_004105555.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;gene=xerD;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228690.1;locus_tag=PHA56_RS04105;product=site-specific tyrosine recombinase XerD;protein_id=WP_004105555.1;transl_table=11 NZ_CP116214.1 RefSeq gene 848655 849368 . + . ID=gene-PHA56_RS04110;Name=dsbC;gbkey=Gene;gene=dsbC;gene_biotype=protein_coding;locus_tag=PHA56_RS04110;old_locus_tag=PHA56_04110 NZ_CP116214.1 Protein Homology CDS 848655 849368 . + 0 ID=cds-WP_004854054.1;Parent=gene-PHA56_RS04110;Dbxref=Genbank:WP_004854054.1;Name=WP_004854054.1;Ontology_term=GO:0042597;gbkey=CDS;gene=dsbC;go_component=periplasmic space|0042597||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228689.1;locus_tag=PHA56_RS04110;product=bifunctional protein-disulfide isomerase/oxidoreductase DsbC;protein_id=WP_004854054.1;transl_table=11 NZ_CP116214.1 RefSeq gene 849374 851107 . + . ID=gene-PHA56_RS04115;Name=recJ;gbkey=Gene;gene=recJ;gene_biotype=protein_coding;locus_tag=PHA56_RS04115;old_locus_tag=PHA56_04115 NZ_CP116214.1 Protein Homology CDS 849374 851107 . + 0 ID=cds-WP_038423602.1;Parent=gene-PHA56_RS04115;Dbxref=Genbank:WP_038423602.1;Name=WP_038423602.1;Ontology_term=GO:0006281,GO:0006310,GO:0008409;gbkey=CDS;gene=recJ;go_function=5'-3' exonuclease activity|0008409||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228688.1;locus_tag=PHA56_RS04115;product=single-stranded-DNA-specific exonuclease RecJ;protein_id=WP_038423602.1;transl_table=11 NZ_CP116214.1 RefSeq gene 851193 852291 . + . ID=gene-PHA56_RS04120;Name=prfB;gbkey=Gene;gene=prfB;gene_biotype=protein_coding;locus_tag=PHA56_RS04120;old_locus_tag=PHA56_04120 NZ_CP116214.1 Protein Homology CDS 851193 851267 . + 0 ID=cds-WP_100248296.1;Parent=gene-PHA56_RS04120;Dbxref=Genbank:WP_100248296.1;Name=WP_100248296.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0003747;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311790.1;locus_tag=PHA56_RS04120;product=peptide chain release factor 2;protein_id=WP_100248296.1;transl_table=11 NZ_CP116214.1 Protein Homology CDS 851269 852291 . + 0 ID=cds-WP_100248296.1;Parent=gene-PHA56_RS04120;Dbxref=Genbank:WP_100248296.1;Name=WP_100248296.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0003747;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311790.1;locus_tag=PHA56_RS04120;product=peptide chain release factor 2;protein_id=WP_100248296.1;transl_table=11 NZ_CP116214.1 RefSeq gene 852301 853818 . + . ID=gene-PHA56_RS04125;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=PHA56_RS04125;old_locus_tag=PHA56_04125 NZ_CP116214.1 Protein Homology CDS 852301 853818 . + 0 ID=cds-WP_004134430.1;Parent=gene-PHA56_RS04125;Dbxref=Genbank:WP_004134430.1;Name=WP_004134430.1;Ontology_term=GO:0006430,GO:0004824,GO:0005737;gbkey=CDS;gene=lysS;go_component=cytoplasm|0005737||IEA;go_function=lysine-tRNA ligase activity|0004824||IEA;go_process=lysyl-tRNA aminoacylation|0006430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001740376.1;locus_tag=PHA56_RS04125;product=lysine--tRNA ligase;protein_id=WP_004134430.1;transl_table=11 NZ_CP116214.1 RefSeq gene 853859 854407 . - . ID=gene-PHA56_RS04130;Name=idi;gbkey=Gene;gene=idi;gene_biotype=protein_coding;locus_tag=PHA56_RS04130;old_locus_tag=PHA56_04130 NZ_CP116214.1 Protein Homology CDS 853859 854407 . - 0 ID=cds-WP_032720097.1;Parent=gene-PHA56_RS04130;Dbxref=Genbank:WP_032720097.1;Name=WP_032720097.1;Ontology_term=GO:0008299,GO:0004452;gbkey=CDS;gene=idi;go_function=isopentenyl-diphosphate delta-isomerase activity|0004452||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226788.1;locus_tag=PHA56_RS04130;product=isopentenyl-diphosphate Delta-isomerase;protein_id=WP_032720097.1;transl_table=11 NZ_CP116214.1 RefSeq gene 854460 855176 . - . ID=gene-PHA56_RS04135;Name=PHA56_RS04135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04135;old_locus_tag=PHA56_04135 NZ_CP116214.1 Protein Homology CDS 854460 855176 . - 0 ID=cds-WP_038423599.1;Parent=gene-PHA56_RS04135;Dbxref=Genbank:WP_038423599.1;Name=WP_038423599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004144724.1;locus_tag=PHA56_RS04135;product=DUF554 domain-containing protein;protein_id=WP_038423599.1;transl_table=11 NZ_CP116214.1 RefSeq gene 855191 855769 . - . ID=gene-PHA56_RS04140;Name=PHA56_RS04140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04140;old_locus_tag=PHA56_04140 NZ_CP116214.1 Protein Homology CDS 855191 855769 . - 0 ID=cds-WP_032693802.1;Parent=gene-PHA56_RS04140;Dbxref=Genbank:WP_032693802.1;Name=WP_032693802.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004134436.1;locus_tag=PHA56_RS04140;product=UbiX family flavin prenyltransferase;protein_id=WP_032693802.1;transl_table=11 NZ_CP116214.1 RefSeq gene 855782 857275 . - . ID=gene-PHA56_RS04145;Name=PHA56_RS04145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04145;old_locus_tag=PHA56_04145 NZ_CP116214.1 Protein Homology CDS 855782 857275 . - 0 ID=cds-WP_038423597.1;Parent=gene-PHA56_RS04145;Dbxref=Genbank:WP_038423597.1;Name=WP_038423597.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020324928.1;locus_tag=PHA56_RS04145;product=UbiD family decarboxylase;protein_id=WP_038423597.1;transl_table=11 NZ_CP116214.1 RefSeq gene 857491 858387 . + . ID=gene-PHA56_RS04150;Name=PHA56_RS04150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04150;old_locus_tag=PHA56_04150 NZ_CP116214.1 Protein Homology CDS 857491 858387 . + 0 ID=cds-WP_032693800.1;Parent=gene-PHA56_RS04150;Dbxref=Genbank:WP_032693800.1;Name=WP_032693800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226785.1;locus_tag=PHA56_RS04150;product=LysR family transcriptional regulator;protein_id=WP_032693800.1;transl_table=11 NZ_CP116214.1 RefSeq gene 858476 859201 . + . ID=gene-PHA56_RS04155;Name=actS;gbkey=Gene;gene=actS;gene_biotype=protein_coding;locus_tag=PHA56_RS04155;old_locus_tag=PHA56_04155 NZ_CP116214.1 Protein Homology CDS 858476 859201 . + 0 ID=cds-WP_004854045.1;Parent=gene-PHA56_RS04155;Dbxref=Genbank:WP_004854045.1;Name=WP_004854045.1;gbkey=CDS;gene=actS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228683.1;locus_tag=PHA56_RS04155;product=amidase activator ActS;protein_id=WP_004854045.1;transl_table=11 NZ_CP116214.1 RefSeq gene 859282 859355 . + . ID=gene-PHA56_RS04160;Name=PHA56_RS04160;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA56_RS04160;old_locus_tag=PHA56_04160 NZ_CP116214.1 tRNAscan-SE tRNA 859282 859355 . + . ID=rna-PHA56_RS04160;Parent=gene-PHA56_RS04160;anticodon=(pos:859314..859316);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS04160;product=tRNA-Gly NZ_CP116214.1 tRNAscan-SE exon 859282 859355 . + . ID=exon-PHA56_RS04160-1;Parent=rna-PHA56_RS04160;anticodon=(pos:859314..859316);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS04160;product=tRNA-Gly NZ_CP116214.1 RefSeq gene 859445 861373 . + . ID=gene-PHA56_RS04165;Name=PHA56_RS04165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04165;old_locus_tag=PHA56_04165 NZ_CP116214.1 Protein Homology CDS 859445 861373 . + 0 ID=cds-WP_119834383.1;Parent=gene-PHA56_RS04165;Dbxref=Genbank:WP_119834383.1;Name=WP_119834383.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000068778.1;locus_tag=PHA56_RS04165;product=site-specific integrase;protein_id=WP_119834383.1;transl_table=11 NZ_CP116214.1 RefSeq gene 862473 863393 . - . ID=gene-PHA56_RS04170;Name=PHA56_RS04170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04170;old_locus_tag=PHA56_04170 NZ_CP116214.1 Protein Homology CDS 862473 863393 . - 0 ID=cds-WP_119834382.1;Parent=gene-PHA56_RS04170;Dbxref=Genbank:WP_119834382.1;Name=WP_119834382.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001549653.1;locus_tag=PHA56_RS04170;product=hypothetical protein;protein_id=WP_119834382.1;transl_table=11 NZ_CP116214.1 RefSeq gene 863619 864179 . + . ID=gene-PHA56_RS04175;Name=PHA56_RS04175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04175;old_locus_tag=PHA56_04175 NZ_CP116214.1 Protein Homology CDS 863619 864179 . + 0 ID=cds-WP_119834381.1;Parent=gene-PHA56_RS04175;Dbxref=Genbank:WP_119834381.1;Name=WP_119834381.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001403343.1;locus_tag=PHA56_RS04175;product=recombinase family protein;protein_id=WP_119834381.1;transl_table=11 NZ_CP116214.1 RefSeq gene 864282 865034 . - . ID=gene-PHA56_RS04180;Name=PHA56_RS04180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04180;old_locus_tag=PHA56_04180 NZ_CP116214.1 Protein Homology CDS 864282 865034 . - 0 ID=cds-WP_224266803.1;Parent=gene-PHA56_RS04180;Dbxref=Genbank:WP_224266803.1;Name=WP_224266803.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015696816.1;locus_tag=PHA56_RS04180;product=N-acyl homoserine lactonase family protein;protein_id=WP_224266803.1;transl_table=11 NZ_CP116214.1 RefSeq gene 865170 865775 . + . ID=gene-PHA56_RS04185;Name=PHA56_RS04185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04185;old_locus_tag=PHA56_04185 NZ_CP116214.1 Protein Homology CDS 865170 865775 . + 0 ID=cds-WP_119834379.1;Parent=gene-PHA56_RS04185;Dbxref=Genbank:WP_119834379.1;Name=WP_119834379.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF028169.2;locus_tag=PHA56_RS04185;product=TetR/AcrR family transcriptional regulator;protein_id=WP_119834379.1;transl_table=11 NZ_CP116214.1 RefSeq gene 865814 866311 . - . ID=gene-PHA56_RS04190;Name=PHA56_RS04190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04190;old_locus_tag=PHA56_04190 NZ_CP116214.1 Protein Homology CDS 865814 866311 . - 0 ID=cds-WP_119834378.1;Parent=gene-PHA56_RS04190;Dbxref=Genbank:WP_119834378.1;Name=WP_119834378.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001691323.1;locus_tag=PHA56_RS04190;product=hypothetical protein;protein_id=WP_119834378.1;transl_table=11 NZ_CP116214.1 RefSeq gene 866551 867015 . + . ID=gene-PHA56_RS04195;Name=PHA56_RS04195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04195;old_locus_tag=PHA56_04195 NZ_CP116214.1 Protein Homology CDS 866551 867015 . + 0 ID=cds-WP_119834377.1;Parent=gene-PHA56_RS04195;Dbxref=Genbank:WP_119834377.1;Name=WP_119834377.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001301826.1;locus_tag=PHA56_RS04195;product=helix-turn-helix transcriptional regulator;protein_id=WP_119834377.1;transl_table=11 NZ_CP116214.1 RefSeq gene 867582 868778 . + . ID=gene-PHA56_RS04200;Name=PHA56_RS04200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04200;old_locus_tag=PHA56_04200 NZ_CP116214.1 Protein Homology CDS 867582 868778 . + 0 ID=cds-WP_038423595.1;Parent=gene-PHA56_RS04200;Dbxref=Genbank:WP_038423595.1;Name=WP_038423595.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000778549.1;locus_tag=PHA56_RS04200;product=tyrosine-type recombinase/integrase;protein_id=WP_038423595.1;transl_table=11 NZ_CP116214.1 RefSeq gene 869090 869953 . + . ID=gene-PHA56_RS04205;Name=PHA56_RS04205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04205;old_locus_tag=PHA56_04205 NZ_CP116214.1 Protein Homology CDS 869090 869953 . + 0 ID=cds-WP_038423593.1;Parent=gene-PHA56_RS04205;Dbxref=Genbank:WP_038423593.1;Name=WP_038423593.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012968583.1;locus_tag=PHA56_RS04205;product=arginase family protein;protein_id=WP_038423593.1;transl_table=11 NZ_CP116214.1 RefSeq gene 870040 870612 . + . ID=gene-PHA56_RS04210;Name=PHA56_RS04210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04210;old_locus_tag=PHA56_04210 NZ_CP116214.1 Protein Homology CDS 870040 870612 . + 0 ID=cds-WP_038423591.1;Parent=gene-PHA56_RS04210;Dbxref=Genbank:WP_038423591.1;Name=WP_038423591.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004141419.1;locus_tag=PHA56_RS04210;product=TetR/AcrR family transcriptional regulator;protein_id=WP_038423591.1;transl_table=11 NZ_CP116214.1 RefSeq gene 870771 871676 . - . ID=gene-PHA56_RS04215;Name=PHA56_RS04215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04215;old_locus_tag=PHA56_04215 NZ_CP116214.1 Protein Homology CDS 870771 871676 . - 0 ID=cds-WP_038423589.1;Parent=gene-PHA56_RS04215;Dbxref=Genbank:WP_038423589.1;Name=WP_038423589.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017146561.1;locus_tag=PHA56_RS04215;product=LysR family transcriptional regulator;protein_id=WP_038423589.1;transl_table=11 NZ_CP116214.1 RefSeq gene 871949 873091 . + . ID=gene-PHA56_RS04220;Name=PHA56_RS04220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04220;old_locus_tag=PHA56_04220 NZ_CP116214.1 Protein Homology CDS 871949 873091 . + 0 ID=cds-WP_196551785.1;Parent=gene-PHA56_RS04220;Dbxref=Genbank:WP_196551785.1;Name=WP_196551785.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012335.2;locus_tag=PHA56_RS04220;product=NAD(P)-dependent alcohol dehydrogenase;protein_id=WP_196551785.1;transl_table=11 NZ_CP116214.1 RefSeq gene 873133 873591 . + . ID=gene-PHA56_RS04225;Name=PHA56_RS04225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04225;old_locus_tag=PHA56_04225 NZ_CP116214.1 Protein Homology CDS 873133 873591 . + 0 ID=cds-WP_038423584.1;Parent=gene-PHA56_RS04225;Dbxref=Genbank:WP_038423584.1;Name=WP_038423584.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016809314.1;locus_tag=PHA56_RS04225;product=cupin domain-containing protein;protein_id=WP_038423584.1;transl_table=11 NZ_CP116214.1 RefSeq gene 873604 874380 . + . ID=gene-PHA56_RS04230;Name=PHA56_RS04230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04230;old_locus_tag=PHA56_04230 NZ_CP116214.1 Protein Homology CDS 873604 874380 . + 0 ID=cds-WP_038423582.1;Parent=gene-PHA56_RS04230;Dbxref=Genbank:WP_038423582.1;Name=WP_038423582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004110845.1;locus_tag=PHA56_RS04230;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_038423582.1;transl_table=11 NZ_CP116214.1 RefSeq gene 874403 875140 . + . ID=gene-PHA56_RS04235;Name=PHA56_RS04235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04235;old_locus_tag=PHA56_04235 NZ_CP116214.1 Protein Homology CDS 874403 875140 . + 0 ID=cds-WP_038423580.1;Parent=gene-PHA56_RS04235;Dbxref=Genbank:WP_038423580.1;Name=WP_038423580.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012968010.1;locus_tag=PHA56_RS04235;product=SDR family oxidoreductase;protein_id=WP_038423580.1;transl_table=11 NZ_CP116214.1 RefSeq gene 875339 876547 . + . ID=gene-PHA56_RS04240;Name=PHA56_RS04240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04240;old_locus_tag=PHA56_04240 NZ_CP116214.1 Protein Homology CDS 875339 876547 . + 0 ID=cds-WP_038423578.1;Parent=gene-PHA56_RS04240;Dbxref=Genbank:WP_038423578.1;Name=WP_038423578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004110839.1;locus_tag=PHA56_RS04240;product=MFS transporter;protein_id=WP_038423578.1;transl_table=11 NZ_CP116214.1 RefSeq gene 876633 877676 . + . ID=gene-PHA56_RS04245;Name=PHA56_RS04245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04245;old_locus_tag=PHA56_04245 NZ_CP116214.1 Protein Homology CDS 876633 877676 . + 0 ID=cds-WP_047068999.1;Parent=gene-PHA56_RS04245;Dbxref=Genbank:WP_047068999.1;Name=WP_047068999.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004110835.1;locus_tag=PHA56_RS04245;product=alpha/beta hydrolase;protein_id=WP_047068999.1;transl_table=11 NZ_CP116214.1 RefSeq gene 877741 878169 . + . ID=gene-PHA56_RS04250;Name=PHA56_RS04250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04250;old_locus_tag=PHA56_04250 NZ_CP116214.1 Protein Homology CDS 877741 878169 . + 0 ID=cds-WP_012968013.1;Parent=gene-PHA56_RS04250;Dbxref=Genbank:WP_012968013.1;Name=WP_012968013.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004110832.1;locus_tag=PHA56_RS04250;product=cyclophilin-like fold protein;protein_id=WP_012968013.1;transl_table=11 NZ_CP116214.1 RefSeq gene 878567 878866 . - . ID=gene-PHA56_RS04255;Name=PHA56_RS04255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04255;old_locus_tag=PHA56_04255 NZ_CP116214.1 Protein Homology CDS 878567 878866 . - 0 ID=cds-WP_224266805.1;Parent=gene-PHA56_RS04255;Dbxref=Genbank:WP_224266805.1;Name=WP_224266805.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016809779.1;locus_tag=PHA56_RS04255;product=helix-turn-helix domain-containing protein;protein_id=WP_224266805.1;transl_table=11 NZ_CP116214.1 RefSeq gene 878965 879216 . - . ID=gene-PHA56_RS04260;Name=PHA56_RS04260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04260;old_locus_tag=PHA56_04260 NZ_CP116214.1 Protein Homology CDS 878965 879216 . - 0 ID=cds-WP_038423574.1;Parent=gene-PHA56_RS04260;Dbxref=Genbank:WP_038423574.1;Name=WP_038423574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004110875.1;locus_tag=PHA56_RS04260;product=DUF1471 domain-containing protein;protein_id=WP_038423574.1;transl_table=11 NZ_CP116214.1 RefSeq gene 879340 880131 . - . ID=gene-PHA56_RS04265;Name=PHA56_RS04265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04265;old_locus_tag=PHA56_04265 NZ_CP116214.1 Protein Homology CDS 879340 880131 . - 0 ID=cds-WP_038423572.1;Parent=gene-PHA56_RS04265;Dbxref=Genbank:WP_038423572.1;Name=WP_038423572.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004110873.1;locus_tag=PHA56_RS04265;product=SDR family oxidoreductase;protein_id=WP_038423572.1;transl_table=11 NZ_CP116214.1 RefSeq gene 880280 881173 . + . ID=gene-PHA56_RS04270;Name=PHA56_RS04270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04270;old_locus_tag=PHA56_04270 NZ_CP116214.1 Protein Homology CDS 880280 881173 . + 0 ID=cds-WP_038423571.1;Parent=gene-PHA56_RS04270;Dbxref=Genbank:WP_038423571.1;Name=WP_038423571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017146556.1;locus_tag=PHA56_RS04270;product=LysR family transcriptional regulator;protein_id=WP_038423571.1;transl_table=11 NZ_CP116214.1 RefSeq gene 881208 882197 . - . ID=gene-PHA56_RS04275;Name=PHA56_RS04275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04275;old_locus_tag=PHA56_04275 NZ_CP116214.1 Protein Homology CDS 881208 882197 . - 0 ID=cds-WP_119834376.1;Parent=gene-PHA56_RS04275;Dbxref=Genbank:WP_119834376.1;Name=WP_119834376.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001172283.1;locus_tag=PHA56_RS04275;product=aldo/keto reductase;protein_id=WP_119834376.1;transl_table=11 NZ_CP116214.1 RefSeq gene 882224 883075 . - . ID=gene-PHA56_RS04280;Name=PHA56_RS04280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04280;old_locus_tag=PHA56_04280 NZ_CP116214.1 Protein Homology CDS 882224 883075 . - 0 ID=cds-WP_271292981.1;Parent=gene-PHA56_RS04280;Dbxref=Genbank:WP_271292981.1;Name=WP_271292981.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001195265.1;locus_tag=PHA56_RS04280;product=aldo/keto reductase;protein_id=WP_271292981.1;transl_table=11 NZ_CP116214.1 RefSeq gene 883674 884657 . + . ID=gene-PHA56_RS04285;Name=PHA56_RS04285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04285;old_locus_tag=PHA56_04285 NZ_CP116214.1 Protein Homology CDS 883674 884657 . + 0 ID=cds-WP_032694018.1;Parent=gene-PHA56_RS04285;Dbxref=Genbank:WP_032694018.1;Name=WP_032694018.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001608824.1;locus_tag=PHA56_RS04285;product=hypothetical protein;protein_id=WP_032694018.1;transl_table=11 NZ_CP116214.1 RefSeq gene 884859 885923 . - . ID=gene-PHA56_RS04290;Name=PHA56_RS04290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04290;old_locus_tag=PHA56_04290 NZ_CP116214.1 Protein Homology CDS 884859 885923 . - 0 ID=cds-WP_038423567.1;Parent=gene-PHA56_RS04290;Dbxref=Genbank:WP_038423567.1;Name=WP_038423567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007885537.1;locus_tag=PHA56_RS04290;product=alpha/beta fold hydrolase;protein_id=WP_038423567.1;transl_table=11 NZ_CP116214.1 RefSeq gene 886031 886615 . - . ID=gene-PHA56_RS04295;Name=PHA56_RS04295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04295;old_locus_tag=PHA56_04295 NZ_CP116214.1 Protein Homology CDS 886031 886615 . - 0 ID=cds-WP_032694020.1;Parent=gene-PHA56_RS04295;Dbxref=Genbank:WP_032694020.1;Name=WP_032694020.1;Ontology_term=GO:0010181;gbkey=CDS;go_function=FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818640.1;locus_tag=PHA56_RS04295;product=flavodoxin;protein_id=WP_032694020.1;transl_table=11 NZ_CP116214.1 RefSeq gene 886625 887386 . - . ID=gene-PHA56_RS04300;Name=PHA56_RS04300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04300;old_locus_tag=PHA56_04300 NZ_CP116214.1 Protein Homology CDS 886625 887386 . - 0 ID=cds-WP_038423565.1;Parent=gene-PHA56_RS04300;Dbxref=Genbank:WP_038423565.1;Name=WP_038423565.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818641.1;locus_tag=PHA56_RS04300;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_038423565.1;transl_table=11 NZ_CP116214.1 RefSeq gene 887364 887840 . - . ID=gene-PHA56_RS04305;Name=PHA56_RS04305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04305;old_locus_tag=PHA56_04305 NZ_CP116214.1 Protein Homology CDS 887364 887840 . - 0 ID=cds-WP_038423563.1;Parent=gene-PHA56_RS04305;Dbxref=Genbank:WP_038423563.1;Name=WP_038423563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008815061.1;locus_tag=PHA56_RS04305;product=cupin domain-containing protein;protein_id=WP_038423563.1;transl_table=11 NZ_CP116214.1 RefSeq gene 887906 889363 . - . ID=gene-PHA56_RS04310;Name=PHA56_RS04310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04310;old_locus_tag=PHA56_04310 NZ_CP116214.1 Protein Homology CDS 887906 889363 . - 0 ID=cds-WP_038423561.1;Parent=gene-PHA56_RS04310;Dbxref=Genbank:WP_038423561.1;Name=WP_038423561.1;Ontology_term=GO:0000160,GO:0016310,GO:0000155,GO:0004673,GO:0016772,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000920032.1;locus_tag=PHA56_RS04310;product=heavy metal sensor histidine kinase;protein_id=WP_038423561.1;transl_table=11 NZ_CP116214.1 RefSeq gene 889379 890059 . - . ID=gene-PHA56_RS04315;Name=PHA56_RS04315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04315;old_locus_tag=PHA56_04315 NZ_CP116214.1 Protein Homology CDS 889379 890059 . - 0 ID=cds-WP_038423559.1;Parent=gene-PHA56_RS04315;Dbxref=Genbank:WP_038423559.1;Name=WP_038423559.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226766.1;locus_tag=PHA56_RS04315;product=heavy metal response regulator transcription factor;protein_id=WP_038423559.1;transl_table=11 NZ_CP116214.1 RefSeq gene 890074 891240 . - . ID=gene-PHA56_RS04320;Name=PHA56_RS04320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04320;old_locus_tag=PHA56_04320 NZ_CP116214.1 Protein Homology CDS 890074 891240 . - 0 ID=cds-WP_171817008.1;Parent=gene-PHA56_RS04320;Dbxref=Genbank:WP_171817008.1;Name=WP_171817008.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014839487.1;locus_tag=PHA56_RS04320;product=aldo/keto reductase;protein_id=WP_171817008.1;transl_table=11 NZ_CP116214.1 RefSeq gene 891515 892540 . + . ID=gene-PHA56_RS04325;Name=PHA56_RS04325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04325;old_locus_tag=PHA56_04325 NZ_CP116214.1 Protein Homology CDS 891515 892540 . + 0 ID=cds-WP_223226772.1;Parent=gene-PHA56_RS04325;Dbxref=Genbank:WP_223226772.1;Name=WP_223226772.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019082642.1;locus_tag=PHA56_RS04325;product=alpha/beta hydrolase;protein_id=WP_223226772.1;transl_table=11 NZ_CP116214.1 RefSeq gene 892541 892693 . - . ID=gene-PHA56_RS04330;Name=PHA56_RS04330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04330;old_locus_tag=PHA56_04330 NZ_CP116214.1 GeneMarkS-2+ CDS 892541 892693 . - 0 ID=cds-WP_014839485.1;Parent=gene-PHA56_RS04330;Dbxref=Genbank:WP_014839485.1;Name=WP_014839485.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PHA56_RS04330;product=hypothetical protein;protein_id=WP_014839485.1;transl_table=11 NZ_CP116214.1 RefSeq gene 892799 893479 . + . ID=gene-PHA56_RS04335;Name=PHA56_RS04335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04335;old_locus_tag=PHA56_04335 NZ_CP116214.1 Protein Homology CDS 892799 893479 . + 0 ID=cds-WP_038423555.1;Parent=gene-PHA56_RS04335;Dbxref=Genbank:WP_038423555.1;Name=WP_038423555.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007885543.1;locus_tag=PHA56_RS04335;product=nitroreductase;protein_id=WP_038423555.1;transl_table=11 NZ_CP116214.1 RefSeq gene 893487 894689 . - . ID=gene-PHA56_RS04340;Name=PHA56_RS04340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04340;old_locus_tag=PHA56_04340 NZ_CP116214.1 Protein Homology CDS 893487 894689 . - 0 ID=cds-WP_038423553.1;Parent=gene-PHA56_RS04340;Dbxref=Genbank:WP_038423553.1;Name=WP_038423553.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014839484.1;locus_tag=PHA56_RS04340;product=multidrug effflux MFS transporter;protein_id=WP_038423553.1;transl_table=11 NZ_CP116214.1 RefSeq gene 894838 895122 . - . ID=gene-PHA56_RS04345;Name=PHA56_RS04345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04345;old_locus_tag=PHA56_04345 NZ_CP116214.1 Protein Homology CDS 894838 895122 . - 0 ID=cds-WP_232393358.1;Parent=gene-PHA56_RS04345;Dbxref=Genbank:WP_232393358.1;Name=WP_232393358.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023111.2;locus_tag=PHA56_RS04345;product=zinc-ribbon domain-containing protein;protein_id=WP_232393358.1;transl_table=11 NZ_CP116214.1 RefSeq gene 895349 895699 . + . ID=gene-PHA56_RS04350;Name=PHA56_RS04350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04350;old_locus_tag=PHA56_04350 NZ_CP116214.1 Protein Homology CDS 895349 895699 . + 0 ID=cds-WP_014839483.1;Parent=gene-PHA56_RS04350;Dbxref=Genbank:WP_014839483.1;Name=WP_014839483.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004124874.1;locus_tag=PHA56_RS04350;product=transcriptional regulator;protein_id=WP_014839483.1;transl_table=11 NZ_CP116214.1 RefSeq pseudogene 895752 897043 . + . ID=gene-PHA56_RS04355;Name=arsB;gbkey=Gene;gene=arsB;gene_biotype=pseudogene;locus_tag=PHA56_RS04355;old_locus_tag=PHA56_04355;pseudo=true NZ_CP116214.1 Protein Homology CDS 895752 897043 . + 0 ID=cds-PHA56_RS04355;Parent=gene-PHA56_RS04355;Note=frameshifted;gbkey=CDS;gene=arsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014839482.1;locus_tag=PHA56_RS04355;product=arsenite efflux transporter membrane subunit ArsB;pseudo=true;transl_table=11 NZ_CP116214.1 RefSeq gene 897057 897482 . + . ID=gene-PHA56_RS04360;Name=arsC;gbkey=Gene;gene=arsC;gene_biotype=protein_coding;locus_tag=PHA56_RS04360;old_locus_tag=PHA56_04360 NZ_CP116214.1 Protein Homology CDS 897057 897482 . + 0 ID=cds-WP_014839481.1;Parent=gene-PHA56_RS04360;Dbxref=Genbank:WP_014839481.1;Name=WP_014839481.1;Ontology_term=GO:0008794;gbkey=CDS;gene=arsC;go_function=arsenate reductase (glutaredoxin) activity|0008794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312402.1;locus_tag=PHA56_RS04360;product=glutaredoxin-dependent arsenate reductase;protein_id=WP_014839481.1;transl_table=11 NZ_CP116214.1 RefSeq pseudogene 897500 898768 . - . ID=gene-PHA56_RS04365;Name=PHA56_RS04365;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS04365;old_locus_tag=PHA56_04365;pseudo=true NZ_CP116214.1 Protein Homology CDS 897500 898768 . - 0 ID=cds-PHA56_RS04365;Parent=gene-PHA56_RS04365;Note=internal stop;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014839480.1;locus_tag=PHA56_RS04365;product=MFS transporter;pseudo=true;transl_table=11 NZ_CP116214.1 RefSeq gene 898982 899512 . + . ID=gene-PHA56_RS04370;Name=PHA56_RS04370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04370;old_locus_tag=PHA56_04370 NZ_CP116214.1 Protein Homology CDS 898982 899512 . + 0 ID=cds-WP_038423551.1;Parent=gene-PHA56_RS04370;Dbxref=Genbank:WP_038423551.1;Name=WP_038423551.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226732.1;locus_tag=PHA56_RS04370;product=AAA family ATPase;protein_id=WP_038423551.1;transl_table=11 NZ_CP116214.1 RefSeq gene 899541 901190 . - . ID=gene-PHA56_RS04375;Name=PHA56_RS04375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04375;old_locus_tag=PHA56_04375 NZ_CP116214.1 Protein Homology CDS 899541 901190 . - 0 ID=cds-WP_014226731.1;Parent=gene-PHA56_RS04375;Dbxref=Genbank:WP_014226731.1;Name=WP_014226731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226731.1;locus_tag=PHA56_RS04375;product=OFA family MFS transporter;protein_id=WP_014226731.1;transl_table=11 NZ_CP116214.1 RefSeq gene 901471 902628 . - . ID=gene-PHA56_RS04380;Name=PHA56_RS04380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04380;old_locus_tag=PHA56_04380 NZ_CP116214.1 Protein Homology CDS 901471 902628 . - 0 ID=cds-WP_032694027.1;Parent=gene-PHA56_RS04380;Dbxref=Genbank:WP_032694027.1;Name=WP_032694027.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226928.1;locus_tag=PHA56_RS04380;product=sugar diacid recognition domain-containing protein;protein_id=WP_032694027.1;transl_table=11 NZ_CP116214.1 RefSeq gene 902625 903800 . - . ID=gene-PHA56_RS04385;Name=PHA56_RS04385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04385;old_locus_tag=PHA56_04385 NZ_CP116214.1 Protein Homology CDS 902625 903800 . - 0 ID=cds-WP_032694028.1;Parent=gene-PHA56_RS04385;Dbxref=Genbank:WP_032694028.1;Name=WP_032694028.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226929.1;locus_tag=PHA56_RS04385;product=glycerate kinase;protein_id=WP_032694028.1;transl_table=11 NZ_CP116214.1 RefSeq gene 903814 905184 . - . ID=gene-PHA56_RS04390;Name=PHA56_RS04390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04390;old_locus_tag=PHA56_04390 NZ_CP116214.1 Protein Homology CDS 903814 905184 . - 0 ID=cds-WP_023321586.1;Parent=gene-PHA56_RS04390;Dbxref=Genbank:WP_023321586.1;Name=WP_023321586.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226930.1;locus_tag=PHA56_RS04390;product=MFS transporter;protein_id=WP_023321586.1;transl_table=11 NZ_CP116214.1 RefSeq gene 905261 906139 . - . ID=gene-PHA56_RS04395;Name=PHA56_RS04395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04395;old_locus_tag=PHA56_04395 NZ_CP116214.1 Protein Homology CDS 905261 906139 . - 0 ID=cds-WP_032694029.1;Parent=gene-PHA56_RS04395;Dbxref=Genbank:WP_032694029.1;Name=WP_032694029.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226931.1;locus_tag=PHA56_RS04395;product=SMP-30/gluconolactonase/LRE family protein;protein_id=WP_032694029.1;transl_table=11 NZ_CP116214.1 RefSeq gene 906153 907490 . - . ID=gene-PHA56_RS04400;Name=PHA56_RS04400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04400;old_locus_tag=PHA56_04400 NZ_CP116214.1 Protein Homology CDS 906153 907490 . - 0 ID=cds-WP_014226725.1;Parent=gene-PHA56_RS04400;Dbxref=Genbank:WP_014226725.1;Name=WP_014226725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016809701.1;locus_tag=PHA56_RS04400;product=MFS transporter;protein_id=WP_014226725.1;transl_table=11 NZ_CP116214.1 RefSeq gene 907626 908816 . - . ID=gene-PHA56_RS04405;Name=PHA56_RS04405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04405;old_locus_tag=PHA56_04405 NZ_CP116214.1 Protein Homology CDS 907626 908816 . - 0 ID=cds-WP_004105426.1;Parent=gene-PHA56_RS04405;Dbxref=Genbank:WP_004105426.1;Name=WP_004105426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226934.1;locus_tag=PHA56_RS04405;product=thiolase family protein;protein_id=WP_004105426.1;transl_table=11 NZ_CP116214.1 RefSeq gene 908828 909562 . - . ID=gene-PHA56_RS04410;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=PHA56_RS04410;old_locus_tag=PHA56_04410 NZ_CP116214.1 Protein Homology CDS 908828 909562 . - 0 ID=cds-WP_038423549.1;Parent=gene-PHA56_RS04410;Dbxref=Genbank:WP_038423549.1;Name=WP_038423549.1;Ontology_term=GO:0006633,GO:0004316,GO:0051287;gbkey=CDS;gene=fabG;go_function=3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity|0004316||IEA,NAD binding|0051287||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226935.1;locus_tag=PHA56_RS04410;product=3-oxoacyl-ACP reductase FabG;protein_id=WP_038423549.1;transl_table=11 NZ_CP116214.1 RefSeq gene 909574 911166 . - . ID=gene-PHA56_RS04415;Name=PHA56_RS04415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04415;old_locus_tag=PHA56_04415 NZ_CP116214.1 Protein Homology CDS 909574 911166 . - 0 ID=cds-WP_032694033.1;Parent=gene-PHA56_RS04415;Dbxref=Genbank:WP_032694033.1;Name=WP_032694033.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226936.1;locus_tag=PHA56_RS04415;product=CoA-transferase;protein_id=WP_032694033.1;transl_table=11 NZ_CP116214.1 RefSeq gene 911163 912719 . - . ID=gene-PHA56_RS04420;Name=PHA56_RS04420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04420;old_locus_tag=PHA56_04420 NZ_CP116214.1 Protein Homology CDS 911163 912719 . - 0 ID=cds-WP_014226721.1;Parent=gene-PHA56_RS04420;Dbxref=Genbank:WP_014226721.1;Name=WP_014226721.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012711.2;locus_tag=PHA56_RS04420;product=class I adenylate-forming enzyme family protein;protein_id=WP_014226721.1;transl_table=11 NZ_CP116214.1 RefSeq gene 912970 913359 . - . ID=gene-PHA56_RS04425;Name=PHA56_RS04425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04425;old_locus_tag=PHA56_04425 NZ_CP116214.1 Protein Homology CDS 912970 913359 . - 0 ID=cds-WP_032694034.1;Parent=gene-PHA56_RS04425;Dbxref=Genbank:WP_032694034.1;Name=WP_032694034.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226938.1;locus_tag=PHA56_RS04425;product=VOC family protein;protein_id=WP_032694034.1;transl_table=11 NZ_CP116214.1 RefSeq gene 913361 914695 . - . ID=gene-PHA56_RS04430;Name=fucP;gbkey=Gene;gene=fucP;gene_biotype=protein_coding;locus_tag=PHA56_RS04430;old_locus_tag=PHA56_04430 NZ_CP116214.1 Protein Homology CDS 913361 914695 . - 0 ID=cds-WP_014839471.1;Parent=gene-PHA56_RS04430;Dbxref=Genbank:WP_014839471.1;Name=WP_014839471.1;Ontology_term=GO:0015756,GO:0015535,GO:0005886;gbkey=CDS;gene=fucP;go_component=plasma membrane|0005886||IEA;go_function=fucose:proton symporter activity|0015535||IEA;go_process=fucose transmembrane transport|0015756||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009654976.1;locus_tag=PHA56_RS04430;product=L-fucose:H+ symporter permease;protein_id=WP_014839471.1;transl_table=11 NZ_CP116214.1 RefSeq gene 914732 915673 . - . ID=gene-PHA56_RS04435;Name=PHA56_RS04435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04435;old_locus_tag=PHA56_04435 NZ_CP116214.1 Protein Homology CDS 914732 915673 . - 0 ID=cds-WP_032694035.1;Parent=gene-PHA56_RS04435;Dbxref=Genbank:WP_032694035.1;Name=WP_032694035.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226941.1;locus_tag=PHA56_RS04435;product=ribokinase;protein_id=WP_032694035.1;transl_table=11 NZ_CP116214.1 RefSeq gene 915685 916374 . - . ID=gene-PHA56_RS04440;Name=alsE;gbkey=Gene;gene=alsE;gene_biotype=protein_coding;locus_tag=PHA56_RS04440;old_locus_tag=PHA56_04440 NZ_CP116214.1 Protein Homology CDS 915685 916374 . - 0 ID=cds-WP_032694037.1;Parent=gene-PHA56_RS04440;Dbxref=Genbank:WP_032694037.1;Name=WP_032694037.1;gbkey=CDS;gene=alsE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226942.1;locus_tag=PHA56_RS04440;product=D-allulose 6-phosphate 3-epimerase;protein_id=WP_032694037.1;transl_table=11 NZ_CP116214.1 RefSeq gene 916484 917284 . - . ID=gene-PHA56_RS04445;Name=PHA56_RS04445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04445;old_locus_tag=PHA56_04445 NZ_CP116214.1 Protein Homology CDS 916484 917284 . - 0 ID=cds-WP_014226717.1;Parent=gene-PHA56_RS04445;Dbxref=Genbank:WP_014226717.1;Name=WP_014226717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226943.1;locus_tag=PHA56_RS04445;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_014226717.1;transl_table=11 NZ_CP116214.1 RefSeq gene 917648 918397 . + . ID=gene-PHA56_RS04450;Name=deoC;gbkey=Gene;gene=deoC;gene_biotype=protein_coding;locus_tag=PHA56_RS04450;old_locus_tag=PHA56_04450 NZ_CP116214.1 Protein Homology CDS 917648 918397 . + 0 ID=cds-WP_014226716.1;Parent=gene-PHA56_RS04450;Dbxref=Genbank:WP_014226716.1;Name=WP_014226716.1;Ontology_term=GO:0009264,GO:0004139;gbkey=CDS;gene=deoC;go_function=deoxyribose-phosphate aldolase activity|0004139||IEA;go_process=deoxyribonucleotide catabolic process|0009264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226944.1;locus_tag=PHA56_RS04450;product=deoxyribose-phosphate aldolase;protein_id=WP_014226716.1;transl_table=11 NZ_CP116214.1 RefSeq gene 918451 919956 . + . ID=gene-PHA56_RS04455;Name=PHA56_RS04455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04455;old_locus_tag=PHA56_04455 NZ_CP116214.1 Protein Homology CDS 918451 919956 . + 0 ID=cds-WP_032694039.1;Parent=gene-PHA56_RS04455;Dbxref=Genbank:WP_032694039.1;Name=WP_032694039.1;Ontology_term=GO:0005975,GO:0016773;gbkey=CDS;go_function=phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226945.1;locus_tag=PHA56_RS04455;product=FGGY family carbohydrate kinase;protein_id=WP_032694039.1;transl_table=11 NZ_CP116214.1 RefSeq gene 920018 920791 . + . ID=gene-PHA56_RS04460;Name=PHA56_RS04460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04460;old_locus_tag=PHA56_04460 NZ_CP116214.1 Protein Homology CDS 920018 920791 . + 0 ID=cds-WP_009654966.1;Parent=gene-PHA56_RS04460;Dbxref=Genbank:WP_009654966.1;Name=WP_009654966.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226946.1;locus_tag=PHA56_RS04460;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_009654966.1;transl_table=11 NZ_CP116214.1 RefSeq gene 920772 921002 . + . ID=gene-PHA56_RS04465;Name=PHA56_RS04465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04465;old_locus_tag=PHA56_04465 NZ_CP116214.1 GeneMarkS-2+ CDS 920772 921002 . + 0 ID=cds-WP_014839463.1;Parent=gene-PHA56_RS04465;Dbxref=Genbank:WP_014839463.1;Name=WP_014839463.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PHA56_RS04465;product=hypothetical protein;protein_id=WP_014839463.1;transl_table=11 NZ_CP116214.1 RefSeq gene 921391 921813 . + . ID=gene-PHA56_RS04470;Name=PHA56_RS04470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04470;old_locus_tag=PHA56_04470 NZ_CP116214.1 Protein Homology CDS 921391 921813 . + 0 ID=cds-WP_014226713.1;Parent=gene-PHA56_RS04470;Dbxref=Genbank:WP_014226713.1;Name=WP_014226713.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004853991.1;locus_tag=PHA56_RS04470;product=hypothetical protein;protein_id=WP_014226713.1;transl_table=11 NZ_CP116214.1 RefSeq gene 922311 923864 . + . ID=gene-PHA56_RS04475;Name=PHA56_RS04475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04475;old_locus_tag=PHA56_04475 NZ_CP116214.1 Protein Homology CDS 922311 923864 . + 0 ID=cds-WP_004124798.1;Parent=gene-PHA56_RS04475;Dbxref=Genbank:WP_004124798.1;Name=WP_004124798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228670.1;locus_tag=PHA56_RS04475;product=peptide MFS transporter;protein_id=WP_004124798.1;transl_table=11 NZ_CP116214.1 RefSeq gene 923905 924684 . - . ID=gene-PHA56_RS04480;Name=PHA56_RS04480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04480;old_locus_tag=PHA56_04480 NZ_CP116214.1 Protein Homology CDS 923905 924684 . - 0 ID=cds-WP_014226712.1;Parent=gene-PHA56_RS04480;Dbxref=Genbank:WP_014226712.1;Name=WP_014226712.1;Ontology_term=GO:0045150,GO:0019152;gbkey=CDS;go_function=acetoin dehydrogenase activity|0019152||IEA;go_process=acetoin catabolic process|0045150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004867328.1;locus_tag=PHA56_RS04480;product=acetoin reductase;protein_id=WP_014226712.1;transl_table=11 NZ_CP116214.1 RefSeq gene 924852 927563 . + . ID=gene-PHA56_RS04485;Name=PHA56_RS04485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04485;old_locus_tag=PHA56_04485 NZ_CP116214.1 Protein Homology CDS 924852 927563 . + 0 ID=cds-WP_032694042.1;Parent=gene-PHA56_RS04485;Dbxref=Genbank:WP_032694042.1;Name=WP_032694042.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226711.1;locus_tag=PHA56_RS04485;product=LuxR C-terminal-related transcriptional regulator;protein_id=WP_032694042.1;transl_table=11 NZ_CP116214.1 RefSeq gene 927560 929038 . - . ID=gene-PHA56_RS04490;Name=PHA56_RS04490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04490;old_locus_tag=PHA56_04490 NZ_CP116214.1 Protein Homology CDS 927560 929038 . - 0 ID=cds-WP_032694044.1;Parent=gene-PHA56_RS04490;Dbxref=Genbank:WP_032694044.1;Name=WP_032694044.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014839459.1;locus_tag=PHA56_RS04490;product=MdtP family multidrug efflux transporter outer membrane subunit;protein_id=WP_032694044.1;transl_table=11 NZ_CP116214.1 RefSeq gene 929035 930972 . - . ID=gene-PHA56_RS04495;Name=PHA56_RS04495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04495;old_locus_tag=PHA56_04495 NZ_CP116214.1 Protein Homology CDS 929035 930972 . - 0 ID=cds-WP_014226709.1;Parent=gene-PHA56_RS04495;Dbxref=Genbank:WP_014226709.1;Name=WP_014226709.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009654954.1;locus_tag=PHA56_RS04495;product=multidrug transporter subunit MdtO;protein_id=WP_014226709.1;transl_table=11 NZ_CP116214.1 RefSeq gene 930982 932010 . - . ID=gene-PHA56_RS04500;Name=mdtN;gbkey=Gene;gene=mdtN;gene_biotype=protein_coding;locus_tag=PHA56_RS04500;old_locus_tag=PHA56_04500 NZ_CP116214.1 Protein Homology CDS 930982 932010 . - 0 ID=cds-WP_088167857.1;Parent=gene-PHA56_RS04500;Dbxref=Genbank:WP_088167857.1;Name=WP_088167857.1;gbkey=CDS;gene=mdtN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004124783.1;locus_tag=PHA56_RS04500;product=multidrug transporter subunit MdtN;protein_id=WP_088167857.1;transl_table=11 NZ_CP116214.1 RefSeq gene 932017 932289 . - . ID=gene-PHA56_RS04505;Name=PHA56_RS04505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04505;old_locus_tag=PHA56_04505 NZ_CP116214.1 Protein Homology CDS 932017 932289 . - 0 ID=cds-WP_088167856.1;Parent=gene-PHA56_RS04505;Dbxref=Genbank:WP_088167856.1;Name=WP_088167856.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228665.1;locus_tag=PHA56_RS04505;product=YtcA family lipoprotein;protein_id=WP_088167856.1;transl_table=11 NZ_CP116214.1 RefSeq gene 932559 932789 . + . ID=gene-PHA56_RS04510;Name=PHA56_RS04510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04510;old_locus_tag=PHA56_04510 NZ_CP116214.1 Protein Homology CDS 932559 932789 . + 0 ID=cds-WP_085520419.1;Parent=gene-PHA56_RS04510;Dbxref=Genbank:WP_085520419.1;Name=WP_085520419.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313135.1;locus_tag=PHA56_RS04510;product=4Fe-4S mono-cluster protein YjdI;protein_id=WP_085520419.1;transl_table=11 NZ_CP116214.1 RefSeq gene 932801 933073 . + . ID=gene-PHA56_RS04515;Name=PHA56_RS04515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04515;old_locus_tag=PHA56_04515 NZ_CP116214.1 Protein Homology CDS 932801 933073 . + 0 ID=cds-WP_014226706.1;Parent=gene-PHA56_RS04515;Dbxref=Genbank:WP_014226706.1;Name=WP_014226706.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228663.1;locus_tag=PHA56_RS04515;product=GNAT family N-acetyltransferase;protein_id=WP_014226706.1;transl_table=11 NZ_CP116214.1 RefSeq gene 933187 933798 . - . ID=gene-PHA56_RS04520;Name=PHA56_RS04520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04520;old_locus_tag=PHA56_04520 NZ_CP116214.1 Protein Homology CDS 933187 933798 . - 0 ID=cds-WP_032694048.1;Parent=gene-PHA56_RS04520;Dbxref=Genbank:WP_032694048.1;Name=WP_032694048.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226705.1;locus_tag=PHA56_RS04520;product=LysE family translocator;protein_id=WP_032694048.1;transl_table=11 NZ_CP116214.1 RefSeq gene 933948 934409 . + . ID=gene-PHA56_RS04525;Name=PHA56_RS04525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04525;old_locus_tag=PHA56_04525 NZ_CP116214.1 Protein Homology CDS 933948 934409 . + 0 ID=cds-WP_014226704.1;Parent=gene-PHA56_RS04525;Dbxref=Genbank:WP_014226704.1;Name=WP_014226704.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226704.1;locus_tag=PHA56_RS04525;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_014226704.1;transl_table=11 NZ_CP116214.1 RefSeq gene 934711 935217 . - . ID=gene-PHA56_RS04530;Name=PHA56_RS04530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04530;old_locus_tag=PHA56_04530 NZ_CP116214.1 Protein Homology CDS 934711 935217 . - 0 ID=cds-WP_088167905.1;Parent=gene-PHA56_RS04530;Dbxref=Genbank:WP_088167905.1;Name=WP_088167905.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226703.1;locus_tag=PHA56_RS04530;product=MarR family transcriptional regulator;protein_id=WP_088167905.1;transl_table=11 NZ_CP116214.1 RefSeq gene 935298 936182 . + . ID=gene-PHA56_RS04535;Name=PHA56_RS04535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04535;old_locus_tag=PHA56_04535 NZ_CP116214.1 Protein Homology CDS 935298 936182 . + 0 ID=cds-WP_119834375.1;Parent=gene-PHA56_RS04535;Dbxref=Genbank:WP_119834375.1;Name=WP_119834375.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004853943.1;locus_tag=PHA56_RS04535;product=EamA family transporter;protein_id=WP_119834375.1;transl_table=11 NZ_CP116214.1 RefSeq gene 936633 936842 . - . ID=gene-PHA56_RS04540;Name=PHA56_RS04540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04540;old_locus_tag=PHA56_04540 NZ_CP116214.1 Protein Homology CDS 936633 936842 . - 0 ID=cds-WP_014226701.1;Parent=gene-PHA56_RS04540;Dbxref=Genbank:WP_014226701.1;Name=WP_014226701.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228648.1;locus_tag=PHA56_RS04540;product=DUF1471 domain-containing protein;protein_id=WP_014226701.1;transl_table=11 NZ_CP116214.1 RefSeq gene 937226 937525 . + . ID=gene-PHA56_RS04545;Name=PHA56_RS04545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04545;old_locus_tag=PHA56_04545 NZ_CP116214.1 Protein Homology CDS 937226 937525 . + 0 ID=cds-WP_014226700.1;Parent=gene-PHA56_RS04545;Dbxref=Genbank:WP_014226700.1;Name=WP_014226700.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226700.1;locus_tag=PHA56_RS04545;product=antibiotic biosynthesis monooxygenase;protein_id=WP_014226700.1;transl_table=11 NZ_CP116214.1 RefSeq gene 937585 938298 . + . ID=gene-PHA56_RS04550;Name=PHA56_RS04550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04550;old_locus_tag=PHA56_04550 NZ_CP116214.1 Protein Homology CDS 937585 938298 . + 0 ID=cds-WP_042946022.1;Parent=gene-PHA56_RS04550;Dbxref=Genbank:WP_042946022.1;Name=WP_042946022.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226699.1;locus_tag=PHA56_RS04550;product=winged helix-turn-helix domain-containing protein;protein_id=WP_042946022.1;transl_table=11 NZ_CP116214.1 RefSeq gene 938701 939309 . + . ID=gene-PHA56_RS04555;Name=mrkA;gbkey=Gene;gene=mrkA;gene_biotype=protein_coding;locus_tag=PHA56_RS04555;old_locus_tag=PHA56_04555 NZ_CP116214.1 Protein Homology CDS 938701 939309 . + 0 ID=cds-WP_001493056.1;Parent=gene-PHA56_RS04555;Dbxref=Genbank:WP_001493056.1;Name=WP_001493056.1;gbkey=CDS;gene=mrkA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228647.1;locus_tag=PHA56_RS04555;product=type 3 fimbria major subunit MrkA;protein_id=WP_001493056.1;transl_table=11 NZ_CP116214.1 RefSeq gene 939503 940204 . + . ID=gene-PHA56_RS04560;Name=PHA56_RS04560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04560;old_locus_tag=PHA56_04560 NZ_CP116214.1 Protein Homology CDS 939503 940204 . + 0 ID=cds-WP_000820820.1;Parent=gene-PHA56_RS04560;Dbxref=Genbank:WP_000820820.1;Name=WP_000820820.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004211921.1;locus_tag=PHA56_RS04560;product=molecular chaperone;protein_id=WP_000820820.1;transl_table=11 NZ_CP116214.1 RefSeq gene 940216 942702 . + . ID=gene-PHA56_RS04565;Name=PHA56_RS04565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04565;old_locus_tag=PHA56_04565 NZ_CP116214.1 Protein Homology CDS 940216 942702 . + 0 ID=cds-WP_032720122.1;Parent=gene-PHA56_RS04565;Dbxref=Genbank:WP_032720122.1;Name=WP_032720122.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228645.1;locus_tag=PHA56_RS04565;product=fimbrial biogenesis outer membrane usher protein;protein_id=WP_032720122.1;transl_table=11 NZ_CP116214.1 RefSeq gene 942693 943688 . + . ID=gene-PHA56_RS04570;Name=PHA56_RS04570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04570;old_locus_tag=PHA56_04570 NZ_CP116214.1 Protein Homology CDS 942693 943688 . + 0 ID=cds-WP_004124708.1;Parent=gene-PHA56_RS04570;Dbxref=Genbank:WP_004124708.1;Name=WP_004124708.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228644.1;locus_tag=PHA56_RS04570;product=fimbrial protein;protein_id=WP_004124708.1;transl_table=11 NZ_CP116214.1 RefSeq gene 943766 944353 . + . ID=gene-PHA56_RS04575;Name=PHA56_RS04575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04575;old_locus_tag=PHA56_04575 NZ_CP116214.1 Protein Homology CDS 943766 944353 . + 0 ID=cds-WP_142395354.1;Parent=gene-PHA56_RS04575;Dbxref=Genbank:WP_142395354.1;Name=WP_142395354.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004867215.1;locus_tag=PHA56_RS04575;product=type 1 fimbrial protein;protein_id=WP_142395354.1;transl_table=11 NZ_CP116214.1 RefSeq gene 944411 945127 . - . ID=gene-PHA56_RS04580;Name=PHA56_RS04580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04580;old_locus_tag=PHA56_04580 NZ_CP116214.1 Protein Homology CDS 944411 945127 . - 0 ID=cds-WP_032694725.1;Parent=gene-PHA56_RS04580;Dbxref=Genbank:WP_032694725.1;Name=WP_032694725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004853928.1;locus_tag=PHA56_RS04580;product=EAL domain-containing protein;protein_id=WP_032694725.1;transl_table=11 NZ_CP116214.1 RefSeq gene 945266 945850 . - . ID=gene-PHA56_RS04585;Name=PHA56_RS04585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04585;old_locus_tag=PHA56_04585 NZ_CP116214.1 Protein Homology CDS 945266 945850 . - 0 ID=cds-WP_038422996.1;Parent=gene-PHA56_RS04585;Dbxref=Genbank:WP_038422996.1;Name=WP_038422996.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004105341.1;locus_tag=PHA56_RS04585;product=helix-turn-helix transcriptional regulator;protein_id=WP_038422996.1;transl_table=11 NZ_CP116214.1 RefSeq gene 945855 946556 . - . ID=gene-PHA56_RS04590;Name=PHA56_RS04590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04590;old_locus_tag=PHA56_04590 NZ_CP116214.1 Protein Homology CDS 945855 946556 . - 0 ID=cds-WP_014226694.1;Parent=gene-PHA56_RS04590;Dbxref=Genbank:WP_014226694.1;Name=WP_014226694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228640.1;locus_tag=PHA56_RS04590;product=pilus assembly protein PilZ;protein_id=WP_014226694.1;transl_table=11 NZ_CP116214.1 RefSeq gene 946945 947817 . - . ID=gene-PHA56_RS04595;Name=PHA56_RS04595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04595;old_locus_tag=PHA56_04595 NZ_CP116214.1 Protein Homology CDS 946945 947817 . - 0 ID=cds-WP_038423534.1;Parent=gene-PHA56_RS04595;Dbxref=Genbank:WP_038423534.1;Name=WP_038423534.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004105336.1;locus_tag=PHA56_RS04595;product=aldo/keto reductase family oxidoreductase;protein_id=WP_038423534.1;transl_table=11 NZ_CP116214.1 RefSeq gene 947934 949163 . - . ID=gene-PHA56_RS04600;Name=PHA56_RS04600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04600;old_locus_tag=PHA56_04600 NZ_CP116214.1 Protein Homology CDS 947934 949163 . - 0 ID=cds-WP_014226692.1;Parent=gene-PHA56_RS04600;Dbxref=Genbank:WP_014226692.1;Name=WP_014226692.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311729.1;locus_tag=PHA56_RS04600;product=amino acid permease;protein_id=WP_014226692.1;transl_table=11 NZ_CP116214.1 RefSeq gene 949300 949761 . - . ID=gene-PHA56_RS04605;Name=PHA56_RS04605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04605;old_locus_tag=PHA56_04605 NZ_CP116214.1 Protein Homology CDS 949300 949761 . - 0 ID=cds-WP_009651689.1;Parent=gene-PHA56_RS04605;Dbxref=Genbank:WP_009651689.1;Name=WP_009651689.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016808900.1;locus_tag=PHA56_RS04605;product=multidrug/biocide efflux PACE transporter;protein_id=WP_009651689.1;transl_table=11 NZ_CP116214.1 RefSeq gene 949858 950730 . + . ID=gene-PHA56_RS04610;Name=PHA56_RS04610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04610;old_locus_tag=PHA56_04610 NZ_CP116214.1 Protein Homology CDS 949858 950730 . + 0 ID=cds-WP_014226691.1;Parent=gene-PHA56_RS04610;Dbxref=Genbank:WP_014226691.1;Name=WP_014226691.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226691.1;locus_tag=PHA56_RS04610;product=LysR family transcriptional regulator;protein_id=WP_014226691.1;transl_table=11 NZ_CP116214.1 RefSeq gene 950861 952039 . + . ID=gene-PHA56_RS04615;Name=PHA56_RS04615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04615;old_locus_tag=PHA56_04615 NZ_CP116214.1 Protein Homology CDS 950861 952039 . + 0 ID=cds-WP_014226690.1;Parent=gene-PHA56_RS04615;Dbxref=Genbank:WP_014226690.1;Name=WP_014226690.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004853912.1;locus_tag=PHA56_RS04615;product=acetyl-CoA C-acetyltransferase;protein_id=WP_014226690.1;transl_table=11 NZ_CP116214.1 RefSeq gene 952282 952977 . + . ID=gene-PHA56_RS04620;Name=PHA56_RS04620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04620;old_locus_tag=PHA56_04620 NZ_CP116214.1 Protein Homology CDS 952282 952977 . + 0 ID=cds-WP_032720124.1;Parent=gene-PHA56_RS04620;Dbxref=Genbank:WP_032720124.1;Name=WP_032720124.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228634.1;locus_tag=PHA56_RS04620;product=oligogalacturonate-specific porin KdgM family protein;protein_id=WP_032720124.1;transl_table=11 NZ_CP116214.1 RefSeq gene 953194 954369 . - . ID=gene-PHA56_RS04625;Name=PHA56_RS04625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04625;old_locus_tag=PHA56_04625 NZ_CP116214.1 Protein Homology CDS 953194 954369 . - 0 ID=cds-WP_038423532.1;Parent=gene-PHA56_RS04625;Dbxref=Genbank:WP_038423532.1;Name=WP_038423532.1;Ontology_term=GO:0045490,GO:0047487;gbkey=CDS;go_function=oligogalacturonide lyase activity|0047487||IEA;go_process=pectin catabolic process|0045490||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228633.1;locus_tag=PHA56_RS04625;product=oligogalacturonate lyase family protein;protein_id=WP_038423532.1;transl_table=11 NZ_CP116214.1 RefSeq gene 954912 955673 . + . ID=gene-PHA56_RS04630;Name=kduD;gbkey=Gene;gene=kduD;gene_biotype=protein_coding;locus_tag=PHA56_RS04630;old_locus_tag=PHA56_04630 NZ_CP116214.1 Protein Homology CDS 954912 955673 . + 0 ID=cds-WP_004124661.1;Parent=gene-PHA56_RS04630;Dbxref=Genbank:WP_004124661.1;Name=WP_004124661.1;Ontology_term=GO:0000272,GO:0008678,GO:0016491,GO:0051287;gbkey=CDS;gene=kduD;go_function=2-deoxy-D-gluconate 3-dehydrogenase activity|0008678||IEA,oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA;go_process=polysaccharide catabolic process|0000272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228631.1;locus_tag=PHA56_RS04630;product=2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD;protein_id=WP_004124661.1;transl_table=11 NZ_CP116214.1 RefSeq gene 955985 957403 . + . ID=gene-PHA56_RS04635;Name=PHA56_RS04635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04635;old_locus_tag=PHA56_04635 NZ_CP116214.1 Protein Homology CDS 955985 957403 . + 0 ID=cds-WP_014226687.1;Parent=gene-PHA56_RS04635;Dbxref=Genbank:WP_014226687.1;Name=WP_014226687.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014839446.1;locus_tag=PHA56_RS04635;product=sugar porter family MFS transporter;protein_id=WP_014226687.1;transl_table=11 NZ_CP116214.1 RefSeq gene 957404 958399 . - . ID=gene-PHA56_RS04640;Name=PHA56_RS04640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04640;old_locus_tag=PHA56_04640 NZ_CP116214.1 Protein Homology CDS 957404 958399 . - 0 ID=cds-WP_014226686.1;Parent=gene-PHA56_RS04640;Dbxref=Genbank:WP_014226686.1;Name=WP_014226686.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004853905.1;locus_tag=PHA56_RS04640;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_014226686.1;transl_table=11 NZ_CP116214.1 RefSeq gene 958640 959881 . + . ID=gene-PHA56_RS04645;Name=PHA56_RS04645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04645;old_locus_tag=PHA56_04645 NZ_CP116214.1 Protein Homology CDS 958640 959881 . + 0 ID=cds-WP_014226685.1;Parent=gene-PHA56_RS04645;Dbxref=Genbank:WP_014226685.1;Name=WP_014226685.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228627.1;locus_tag=PHA56_RS04645;product=MFS transporter;protein_id=WP_014226685.1;transl_table=11 NZ_CP116214.1 RefSeq gene 959900 961333 . + . ID=gene-PHA56_RS04650;Name=PHA56_RS04650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04650;old_locus_tag=PHA56_04650 NZ_CP116214.1 Protein Homology CDS 959900 961333 . + 0 ID=cds-WP_038423531.1;Parent=gene-PHA56_RS04650;Dbxref=Genbank:WP_038423531.1;Name=WP_038423531.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228626.1;locus_tag=PHA56_RS04650;product=glycoside hydrolase family 32 protein;protein_id=WP_038423531.1;transl_table=11 NZ_CP116214.1 RefSeq gene 961456 962802 . + . ID=gene-PHA56_RS04655;Name=PHA56_RS04655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04655;old_locus_tag=PHA56_04655 NZ_CP116214.1 Protein Homology CDS 961456 962802 . + 0 ID=cds-WP_014226683.1;Parent=gene-PHA56_RS04655;Dbxref=Genbank:WP_014226683.1;Name=WP_014226683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228625.1;locus_tag=PHA56_RS04655;product=carbohydrate porin;protein_id=WP_014226683.1;transl_table=11 NZ_CP116214.1 RefSeq gene 962914 964041 . - . ID=gene-PHA56_RS04660;Name=PHA56_RS04660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04660;old_locus_tag=PHA56_04660 NZ_CP116214.1 Protein Homology CDS 962914 964041 . - 0 ID=cds-WP_077255401.1;Parent=gene-PHA56_RS04660;Dbxref=Genbank:WP_077255401.1;Name=WP_077255401.1;Ontology_term=GO:0045490,GO:0047487;gbkey=CDS;go_function=oligogalacturonide lyase activity|0047487||IEA;go_process=pectin catabolic process|0045490||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004124647.1;locus_tag=PHA56_RS04660;product=oligogalacturonate lyase family protein;protein_id=WP_077255401.1;transl_table=11 NZ_CP116214.1 RefSeq gene 964112 965398 . - . ID=gene-PHA56_RS04665;Name=PHA56_RS04665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04665;old_locus_tag=PHA56_04665 NZ_CP116214.1 Protein Homology CDS 964112 965398 . - 0 ID=cds-WP_004105307.1;Parent=gene-PHA56_RS04665;Dbxref=Genbank:WP_004105307.1;Name=WP_004105307.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228624.1;locus_tag=PHA56_RS04665;product=ABC transporter substrate-binding protein;protein_id=WP_004105307.1;transl_table=11 NZ_CP116214.1 RefSeq gene 965415 966542 . - . ID=gene-PHA56_RS04670;Name=PHA56_RS04670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04670;old_locus_tag=PHA56_04670 NZ_CP116214.1 Protein Homology CDS 965415 966542 . - 0 ID=cds-WP_014226681.1;Parent=gene-PHA56_RS04670;Dbxref=Genbank:WP_014226681.1;Name=WP_014226681.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228623.1;locus_tag=PHA56_RS04670;product=ABC transporter ATP-binding protein;protein_id=WP_014226681.1;transl_table=11 NZ_CP116214.1 RefSeq gene 966555 967457 . - . ID=gene-PHA56_RS04675;Name=PHA56_RS04675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04675;old_locus_tag=PHA56_04675 NZ_CP116214.1 Protein Homology CDS 966555 967457 . - 0 ID=cds-WP_014226680.1;Parent=gene-PHA56_RS04675;Dbxref=Genbank:WP_014226680.1;Name=WP_014226680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228622.1;locus_tag=PHA56_RS04675;product=carbohydrate ABC transporter permease;protein_id=WP_014226680.1;transl_table=11 NZ_CP116214.1 RefSeq gene 967450 968340 . - . ID=gene-PHA56_RS04680;Name=PHA56_RS04680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04680;old_locus_tag=PHA56_04680 NZ_CP116214.1 Protein Homology CDS 967450 968340 . - 0 ID=cds-WP_014226679.1;Parent=gene-PHA56_RS04680;Dbxref=Genbank:WP_014226679.1;Name=WP_014226679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228621.1;locus_tag=PHA56_RS04680;product=sugar ABC transporter permease;protein_id=WP_014226679.1;transl_table=11 NZ_CP116214.1 RefSeq gene 968836 969162 . - . ID=gene-PHA56_RS04685;Name=PHA56_RS04685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04685;old_locus_tag=PHA56_04685 NZ_CP116214.1 Protein Homology CDS 968836 969162 . - 0 ID=cds-WP_004853896.1;Parent=gene-PHA56_RS04685;Dbxref=Genbank:WP_004853896.1;Name=WP_004853896.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004853896.1;locus_tag=PHA56_RS04685;product=cupin domain-containing protein;protein_id=WP_004853896.1;transl_table=11 NZ_CP116214.1 RefSeq gene 969299 969991 . + . ID=gene-PHA56_RS04690;Name=PHA56_RS04690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04690;old_locus_tag=PHA56_04690 NZ_CP116214.1 Protein Homology CDS 969299 969991 . + 0 ID=cds-WP_014226678.1;Parent=gene-PHA56_RS04690;Dbxref=Genbank:WP_014226678.1;Name=WP_014226678.1;Ontology_term=GO:0006807,GO:0016855;gbkey=CDS;go_function=racemase and epimerase activity%2C acting on amino acids and derivatives|0016855||IEA;go_process=nitrogen compound metabolic process|0006807||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226678.1;locus_tag=PHA56_RS04690;product=aspartate/glutamate racemase;protein_id=WP_014226678.1;transl_table=11 NZ_CP116214.1 RefSeq gene 970091 970666 . - . ID=gene-PHA56_RS04695;Name=PHA56_RS04695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04695;old_locus_tag=PHA56_04695 NZ_CP116214.1 Protein Homology CDS 970091 970666 . - 0 ID=cds-WP_032694716.1;Parent=gene-PHA56_RS04695;Dbxref=Genbank:WP_032694716.1;Name=WP_032694716.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006686948.1;locus_tag=PHA56_RS04695;product=hypothetical protein;protein_id=WP_032694716.1;transl_table=11 NZ_CP116214.1 RefSeq gene 970657 973053 . - . ID=gene-PHA56_RS04700;Name=PHA56_RS04700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04700;old_locus_tag=PHA56_04700 NZ_CP116214.1 Protein Homology CDS 970657 973053 . - 0 ID=cds-WP_032694715.1;Parent=gene-PHA56_RS04700;Dbxref=Genbank:WP_032694715.1;Name=WP_032694715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006686949.1;locus_tag=PHA56_RS04700;product=fimbrial biogenesis usher protein;protein_id=WP_032694715.1;transl_table=11 NZ_CP116214.1 RefSeq gene 973065 973742 . - . ID=gene-PHA56_RS04705;Name=PHA56_RS04705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04705;old_locus_tag=PHA56_04705 NZ_CP116214.1 Protein Homology CDS 973065 973742 . - 0 ID=cds-WP_042946249.1;Parent=gene-PHA56_RS04705;Dbxref=Genbank:WP_042946249.1;Name=WP_042946249.1;Ontology_term=GO:0061077;gbkey=CDS;go_process=chaperone-mediated protein folding|0061077||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006686950.1;locus_tag=PHA56_RS04705;product=fimbria/pilus chaperone family protein;protein_id=WP_042946249.1;transl_table=11 NZ_CP116214.1 RefSeq gene 973865 974554 . - . ID=gene-PHA56_RS04710;Name=PHA56_RS04710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04710;old_locus_tag=PHA56_04710 NZ_CP116214.1 Protein Homology CDS 973865 974554 . - 0 ID=cds-WP_038423526.1;Parent=gene-PHA56_RS04710;Dbxref=Genbank:WP_038423526.1;Name=WP_038423526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003860449.1;locus_tag=PHA56_RS04710;product=DUF1120 domain-containing protein;protein_id=WP_038423526.1;transl_table=11 NZ_CP116214.1 RefSeq gene 974594 975265 . - . ID=gene-PHA56_RS04715;Name=PHA56_RS04715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04715;old_locus_tag=PHA56_04715 NZ_CP116214.1 Protein Homology CDS 974594 975265 . - 0 ID=cds-WP_032694713.1;Parent=gene-PHA56_RS04715;Dbxref=Genbank:WP_032694713.1;Name=WP_032694713.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014171839.1;locus_tag=PHA56_RS04715;product=DUF1120 domain-containing protein;protein_id=WP_032694713.1;transl_table=11 NZ_CP116214.1 RefSeq gene 975613 976638 . - . ID=gene-PHA56_RS04720;Name=PHA56_RS04720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04720;old_locus_tag=PHA56_04720 NZ_CP116214.1 Protein Homology CDS 975613 976638 . - 0 ID=cds-WP_040118421.1;Parent=gene-PHA56_RS04720;Dbxref=Genbank:WP_040118421.1;Name=WP_040118421.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011144720.1;locus_tag=PHA56_RS04720;product=IS630 family transposase;protein_id=WP_040118421.1;transl_table=11 NZ_CP116214.1 RefSeq gene 976670 977599 . - . ID=gene-PHA56_RS04725;Name=PHA56_RS04725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04725;old_locus_tag=PHA56_04725 NZ_CP116214.1 Protein Homology CDS 976670 977599 . - 0 ID=cds-WP_271292959.1;Parent=gene-PHA56_RS04725;Dbxref=Genbank:WP_271292959.1;Name=WP_271292959.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004115115.1;locus_tag=PHA56_RS04725;product=LysR family transcriptional regulator;protein_id=WP_271292959.1;transl_table=11 NZ_CP116214.1 RefSeq gene 977733 978995 . + . ID=gene-PHA56_RS04730;Name=lysA;gbkey=Gene;gene=lysA;gene_biotype=protein_coding;locus_tag=PHA56_RS04730;old_locus_tag=PHA56_04730 NZ_CP116214.1 Protein Homology CDS 977733 978995 . + 0 ID=cds-WP_042946013.1;Parent=gene-PHA56_RS04730;Dbxref=Genbank:WP_042946013.1;Name=WP_042946013.1;Ontology_term=GO:0009089,GO:0008836;gbkey=CDS;gene=lysA;go_function=diaminopimelate decarboxylase activity|0008836||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228617.1;locus_tag=PHA56_RS04730;product=diaminopimelate decarboxylase;protein_id=WP_042946013.1;transl_table=11 NZ_CP116214.1 RefSeq gene 979035 980036 . - . ID=gene-PHA56_RS04735;Name=PHA56_RS04735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04735;old_locus_tag=PHA56_04735 NZ_CP116214.1 Protein Homology CDS 979035 980036 . - 0 ID=cds-WP_162763199.1;Parent=gene-PHA56_RS04735;Dbxref=Genbank:WP_162763199.1;Name=WP_162763199.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004853887.1;locus_tag=PHA56_RS04735;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_162763199.1;transl_table=11 NZ_CP116214.1 RefSeq gene 980340 981677 . + . ID=gene-PHA56_RS04740;Name=PHA56_RS04740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04740;old_locus_tag=PHA56_04740 NZ_CP116214.1 Protein Homology CDS 980340 981677 . + 0 ID=cds-WP_014226668.1;Parent=gene-PHA56_RS04740;Dbxref=Genbank:WP_014226668.1;Name=WP_014226668.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228615.1;locus_tag=PHA56_RS04740;product=PTS transporter subunit EIIC;protein_id=WP_014226668.1;transl_table=11 NZ_CP116214.1 RefSeq gene 981685 983112 . + . ID=gene-PHA56_RS04745;Name=PHA56_RS04745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04745;old_locus_tag=PHA56_04745 NZ_CP116214.1 Protein Homology CDS 981685 983112 . + 0 ID=cds-WP_042946011.1;Parent=gene-PHA56_RS04745;Dbxref=Genbank:WP_042946011.1;Name=WP_042946011.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228614.1;locus_tag=PHA56_RS04745;product=glycoside hydrolase family 1 protein;protein_id=WP_042946011.1;transl_table=11 NZ_CP116214.1 RefSeq gene 983181 983954 . + . ID=gene-PHA56_RS04750;Name=PHA56_RS04750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04750;old_locus_tag=PHA56_04750 NZ_CP116214.1 Protein Homology CDS 983181 983954 . + 0 ID=cds-WP_004105268.1;Parent=gene-PHA56_RS04750;Dbxref=Genbank:WP_004105268.1;Name=WP_004105268.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228613.1;locus_tag=PHA56_RS04750;product=GntR family transcriptional regulator;protein_id=WP_004105268.1;transl_table=11 NZ_CP116214.1 RefSeq gene 983951 984430 . + . ID=gene-PHA56_RS04755;Name=PHA56_RS04755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04755;old_locus_tag=PHA56_04755 NZ_CP116214.1 Protein Homology CDS 983951 984430 . + 0 ID=cds-WP_014226666.1;Parent=gene-PHA56_RS04755;Dbxref=Genbank:WP_014226666.1;Name=WP_014226666.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228612.1;locus_tag=PHA56_RS04755;product=GNAT family N-acetyltransferase;protein_id=WP_014226666.1;transl_table=11 NZ_CP116214.1 RefSeq gene 984391 985407 . - . ID=gene-PHA56_RS04760;Name=galR;gbkey=Gene;gene=galR;gene_biotype=protein_coding;locus_tag=PHA56_RS04760;old_locus_tag=PHA56_04760 NZ_CP116214.1 Protein Homology CDS 984391 985407 . - 0 ID=cds-WP_014226665.1;Parent=gene-PHA56_RS04760;Dbxref=Genbank:WP_014226665.1;Name=WP_014226665.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=galR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228611.1;locus_tag=PHA56_RS04760;product=HTH-type transcriptional regulator GalR;protein_id=WP_014226665.1;transl_table=11 NZ_CP116214.1 RefSeq gene 986030 988189 . + . ID=gene-PHA56_RS04765;Name=aas;gbkey=Gene;gene=aas;gene_biotype=protein_coding;locus_tag=PHA56_RS04765;old_locus_tag=PHA56_04765 NZ_CP116214.1 Protein Homology CDS 986030 988189 . + 0 ID=cds-WP_032694707.1;Parent=gene-PHA56_RS04765;Dbxref=Genbank:WP_032694707.1;Name=WP_032694707.1;Ontology_term=GO:0006631,GO:0008654,GO:0008779,GO:0008922;gbkey=CDS;gene=aas;go_function=acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase activity|0008779||IEA,long-chain fatty acid [acyl-carrier-protein] ligase activity|0008922||IEA;go_process=fatty acid metabolic process|0006631||IEA,phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228609.1;locus_tag=PHA56_RS04765;product=bifunctional acyl-ACP--phospholipid O-acyltransferase/long-chain-fatty-acid--ACP ligase;protein_id=WP_032694707.1;transl_table=11 NZ_CP116214.1 RefSeq gene 988182 989375 . + . ID=gene-PHA56_RS04770;Name=lplT;gbkey=Gene;gene=lplT;gene_biotype=protein_coding;locus_tag=PHA56_RS04770;old_locus_tag=PHA56_04770 NZ_CP116214.1 Protein Homology CDS 988182 989375 . + 0 ID=cds-WP_032694706.1;Parent=gene-PHA56_RS04770;Dbxref=Genbank:WP_032694706.1;Name=WP_032694706.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=lplT;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228608.1;locus_tag=PHA56_RS04770;product=lysophospholipid transporter LplT;protein_id=WP_032694706.1;transl_table=11 NZ_CP116214.1 RefSeq gene 989475 990515 . - . ID=gene-PHA56_RS04775;Name=PHA56_RS04775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04775;old_locus_tag=PHA56_04775 NZ_CP116214.1 Protein Homology CDS 989475 990515 . - 0 ID=cds-WP_014226662.1;Parent=gene-PHA56_RS04775;Dbxref=Genbank:WP_014226662.1;Name=WP_014226662.1;Ontology_term=GO:0047834;gbkey=CDS;go_function=D-threo-aldose 1-dehydrogenase activity|0047834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228607.1;locus_tag=PHA56_RS04775;product=NADP(H)-dependent aldo-keto reductase;protein_id=WP_014226662.1;transl_table=11 NZ_CP116214.1 RefSeq gene 990753 990971 . - . ID=gene-PHA56_RS04780;Name=PHA56_RS04780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04780;old_locus_tag=PHA56_04780 NZ_CP116214.1 Protein Homology CDS 990753 990971 . - 0 ID=cds-WP_004105255.1;Parent=gene-PHA56_RS04780;Dbxref=Genbank:WP_004105255.1;Name=WP_004105255.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228606.1;locus_tag=PHA56_RS04780;product=YgdI/YgdR family lipoprotein;protein_id=WP_004105255.1;transl_table=11 NZ_CP116214.1 RefSeq gene 991096 991809 . - . ID=gene-PHA56_RS04785;Name=PHA56_RS04785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04785;old_locus_tag=PHA56_04785 NZ_CP116214.1 Protein Homology CDS 991096 991809 . - 0 ID=cds-WP_004105253.1;Parent=gene-PHA56_RS04785;Dbxref=Genbank:WP_004105253.1;Name=WP_004105253.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228605.1;locus_tag=PHA56_RS04785;product=TerC family protein;protein_id=WP_004105253.1;transl_table=11 NZ_CP116214.1 RefSeq gene 991891 992586 . - . ID=gene-PHA56_RS04790;Name=mutH;gbkey=Gene;gene=mutH;gene_biotype=protein_coding;locus_tag=PHA56_RS04790;old_locus_tag=PHA56_04790 NZ_CP116214.1 Protein Homology CDS 991891 992586 . - 0 ID=cds-WP_038423524.1;Parent=gene-PHA56_RS04790;Dbxref=Genbank:WP_038423524.1;Name=WP_038423524.1;Ontology_term=GO:0006304,GO:0004519;gbkey=CDS;gene=mutH;go_function=endonuclease activity|0004519||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014839430.1;locus_tag=PHA56_RS04790;product=DNA mismatch repair endonuclease MutH;protein_id=WP_038423524.1;transl_table=11 NZ_CP116214.1 RefSeq gene 993269 993799 . + . ID=gene-PHA56_RS04795;Name=rppH;gbkey=Gene;gene=rppH;gene_biotype=protein_coding;locus_tag=PHA56_RS04795;old_locus_tag=PHA56_04795 NZ_CP116214.1 Protein Homology CDS 993269 993799 . + 0 ID=cds-WP_004124593.1;Parent=gene-PHA56_RS04795;Dbxref=Genbank:WP_004124593.1;Name=WP_004124593.1;Ontology_term=GO:0016787;gbkey=CDS;gene=rppH;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001655775.1;locus_tag=PHA56_RS04795;product=RNA pyrophosphohydrolase;protein_id=WP_004124593.1;transl_table=11 NZ_CP116214.1 RefSeq gene 993812 996058 . + . ID=gene-PHA56_RS04800;Name=ptsP;gbkey=Gene;gene=ptsP;gene_biotype=protein_coding;locus_tag=PHA56_RS04800;old_locus_tag=PHA56_04800 NZ_CP116214.1 Protein Homology CDS 993812 996058 . + 0 ID=cds-WP_014226660.1;Parent=gene-PHA56_RS04800;Dbxref=Genbank:WP_014226660.1;Name=WP_014226660.1;gbkey=CDS;gene=ptsP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228601.1;locus_tag=PHA56_RS04800;product=phosphoenolpyruvate--protein phosphotransferase;protein_id=WP_014226660.1;transl_table=11 NZ_CP116214.1 RefSeq gene 996354 997229 . + . ID=gene-PHA56_RS04805;Name=lgt;gbkey=Gene;gene=lgt;gene_biotype=protein_coding;locus_tag=PHA56_RS04805;old_locus_tag=PHA56_04805 NZ_CP116214.1 Protein Homology CDS 996354 997229 . + 0 ID=cds-WP_014226659.1;Parent=gene-PHA56_RS04805;Dbxref=Genbank:WP_014226659.1;Name=WP_014226659.1;Ontology_term=GO:0009249,GO:0008961,GO:0016020;gbkey=CDS;gene=lgt;go_component=membrane|0016020||IEA;go_function=phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity|0008961||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228600.1;locus_tag=PHA56_RS04805;product=prolipoprotein diacylglyceryl transferase;protein_id=WP_014226659.1;transl_table=11 NZ_CP116214.1 RefSeq gene 997236 998030 . + . ID=gene-PHA56_RS04810;Name=thyA;gbkey=Gene;gene=thyA;gene_biotype=protein_coding;locus_tag=PHA56_RS04810;old_locus_tag=PHA56_04810 NZ_CP116214.1 Protein Homology CDS 997236 998030 . + 0 ID=cds-WP_271292960.1;Parent=gene-PHA56_RS04810;Dbxref=Genbank:WP_271292960.1;Name=WP_271292960.1;Ontology_term=GO:0006231,GO:0004799;gbkey=CDS;gene=thyA;go_function=thymidylate synthase activity|0004799||IEA;go_process=dTMP biosynthetic process|0006231||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123418.1;locus_tag=PHA56_RS04810;product=thymidylate synthase;protein_id=WP_271292960.1;transl_table=11 NZ_CP116214.1 RefSeq gene 998251 998718 . + . ID=gene-PHA56_RS04815;Name=PHA56_RS04815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04815;old_locus_tag=PHA56_04815 NZ_CP116214.1 Protein Homology CDS 998251 998718 . + 0 ID=cds-WP_038423523.1;Parent=gene-PHA56_RS04815;Dbxref=Genbank:WP_038423523.1;Name=WP_038423523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004115082.1;locus_tag=PHA56_RS04815;product=prepilin peptidase-dependent protein;protein_id=WP_038423523.1;transl_table=11 NZ_CP116214.1 RefSeq gene 998709 999272 . + . ID=gene-PHA56_RS04820;Name=PHA56_RS04820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04820;old_locus_tag=PHA56_04820 NZ_CP116214.1 Protein Homology CDS 998709 999272 . + 0 ID=cds-WP_014226658.1;Parent=gene-PHA56_RS04820;Dbxref=Genbank:WP_014226658.1;Name=WP_014226658.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004115079.1;locus_tag=PHA56_RS04820;product=prepilin peptidase-dependent protein;protein_id=WP_014226658.1;transl_table=11 NZ_CP116214.1 RefSeq gene 999269 999682 . + . ID=gene-PHA56_RS04825;Name=PHA56_RS04825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04825;old_locus_tag=PHA56_04825 NZ_CP116214.1 Protein Homology CDS 999269 999682 . + 0 ID=cds-WP_038423522.1;Parent=gene-PHA56_RS04825;Dbxref=Genbank:WP_038423522.1;Name=WP_038423522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012967286.1;locus_tag=PHA56_RS04825;product=DUF2509 family protein;protein_id=WP_038423522.1;transl_table=11 NZ_CP116214.1 RefSeq gene 999667 999990 . + . ID=gene-PHA56_RS04830;Name=PHA56_RS04830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04830;old_locus_tag=PHA56_04830 NZ_CP116214.1 Protein Homology CDS 999667 999990 . + 0 ID=cds-WP_038423521.1;Parent=gene-PHA56_RS04830;Dbxref=Genbank:WP_038423521.1;Name=WP_038423521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004205450.1;locus_tag=PHA56_RS04830;product=prepilin-type N-terminal cleavage/methylation domain-containing protein;protein_id=WP_038423521.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1000003 1003377 . + . ID=gene-PHA56_RS04835;Name=recC;gbkey=Gene;gene=recC;gene_biotype=protein_coding;locus_tag=PHA56_RS04835;old_locus_tag=PHA56_04835 NZ_CP116214.1 Protein Homology CDS 1000003 1003377 . + 0 ID=cds-WP_038423520.1;Parent=gene-PHA56_RS04835;Dbxref=Genbank:WP_038423520.1;Name=WP_038423520.1;Ontology_term=GO:0008854,GO:0009338;gbkey=CDS;gene=recC;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=exodeoxyribonuclease V activity|0008854||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226655.1;locus_tag=PHA56_RS04835;product=exodeoxyribonuclease V subunit gamma;protein_id=WP_038423520.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1003505 1006390 . + . ID=gene-PHA56_RS04840;Name=ptrA;gbkey=Gene;gene=ptrA;gene_biotype=protein_coding;locus_tag=PHA56_RS04840;old_locus_tag=PHA56_04840 NZ_CP116214.1 Protein Homology CDS 1003505 1006390 . + 0 ID=cds-WP_038423519.1;Parent=gene-PHA56_RS04840;Dbxref=Genbank:WP_038423519.1;Name=WP_038423519.1;Ontology_term=GO:0006508,GO:0004222,GO:0046872;gbkey=CDS;gene=ptrA;go_function=metalloendopeptidase activity|0004222||IEA,metal ion binding|0046872||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311705.1;locus_tag=PHA56_RS04840;product=pitrilysin;protein_id=WP_038423519.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1006387 1009932 . + . ID=gene-PHA56_RS04845;Name=recB;gbkey=Gene;gene=recB;gene_biotype=protein_coding;locus_tag=PHA56_RS04845;old_locus_tag=PHA56_04845 NZ_CP116214.1 Protein Homology CDS 1006387 1009932 . + 0 ID=cds-WP_038423518.1;Parent=gene-PHA56_RS04845;Dbxref=Genbank:WP_038423518.1;Name=WP_038423518.1;Ontology_term=GO:0006281,GO:0003677,GO:0003678,GO:0005524,GO:0008854;gbkey=CDS;gene=recB;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,exodeoxyribonuclease V activity|0008854||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009654247.1;locus_tag=PHA56_RS04845;product=exodeoxyribonuclease V subunit beta;protein_id=WP_038423518.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1009929 1011764 . + . ID=gene-PHA56_RS04850;Name=recD;gbkey=Gene;gene=recD;gene_biotype=protein_coding;locus_tag=PHA56_RS04850;old_locus_tag=PHA56_04850 NZ_CP116214.1 Protein Homology CDS 1009929 1011764 . + 0 ID=cds-WP_038423517.1;Parent=gene-PHA56_RS04850;Dbxref=Genbank:WP_038423517.1;Name=WP_038423517.1;Ontology_term=GO:0006302,GO:0006310,GO:0004386,GO:0008854,GO:0009338;gbkey=CDS;gene=recD;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=helicase activity|0004386||IEA,exodeoxyribonuclease V activity|0008854||IEA;go_process=double-strand break repair|0006302||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004853842.1;locus_tag=PHA56_RS04850;product=exodeoxyribonuclease V subunit alpha;protein_id=WP_038423517.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1011806 1013137 . - . ID=gene-PHA56_RS04855;Name=argA;gbkey=Gene;gene=argA;gene_biotype=protein_coding;locus_tag=PHA56_RS04855;old_locus_tag=PHA56_04855 NZ_CP116214.1 Protein Homology CDS 1011806 1013137 . - 0 ID=cds-WP_004853841.1;Parent=gene-PHA56_RS04855;Dbxref=Genbank:WP_004853841.1;Name=WP_004853841.1;Ontology_term=GO:0006526,GO:0004042;gbkey=CDS;gene=argA;go_function=acetyl-CoA:L-glutamate N-acetyltransferase activity|0004042||IEA;go_process=arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228589.1;locus_tag=PHA56_RS04855;product=amino-acid N-acetyltransferase;protein_id=WP_004853841.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1013365 1014618 . + . ID=gene-PHA56_RS04860;Name=amiC;gbkey=Gene;gene=amiC;gene_biotype=protein_coding;locus_tag=PHA56_RS04860;old_locus_tag=PHA56_04860 NZ_CP116214.1 Protein Homology CDS 1013365 1014618 . + 0 ID=cds-WP_014226651.1;Parent=gene-PHA56_RS04860;Dbxref=Genbank:WP_014226651.1;Name=WP_014226651.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=amiC;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228588.1;locus_tag=PHA56_RS04860;product=N-acetylmuramoyl-L-alanine amidase AmiC;protein_id=WP_014226651.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1014636 1015715 . + . ID=gene-PHA56_RS04865;Name=cobD;gbkey=Gene;gene=cobD;gene_biotype=protein_coding;locus_tag=PHA56_RS04865;old_locus_tag=PHA56_04865 NZ_CP116214.1 Protein Homology CDS 1014636 1015715 . + 0 ID=cds-WP_038423515.1;Parent=gene-PHA56_RS04865;Dbxref=Genbank:WP_038423515.1;Name=WP_038423515.1;Ontology_term=GO:0009236,GO:0048472,GO:0005737;gbkey=CDS;gene=cobD;go_component=cytoplasm|0005737||IEA;go_function=threonine-phosphate decarboxylase activity|0048472||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004105223.1;locus_tag=PHA56_RS04865;product=threonine-phosphate decarboxylase CobD;protein_id=WP_038423515.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1016712 1017578 . - . ID=gene-PHA56_RS04870;Name=PHA56_RS04870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04870;old_locus_tag=PHA56_04870 NZ_CP116214.1 Protein Homology CDS 1016712 1017578 . - 0 ID=cds-WP_032694696.1;Parent=gene-PHA56_RS04870;Dbxref=Genbank:WP_032694696.1;Name=WP_032694696.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004133635.1;locus_tag=PHA56_RS04870;product=L-threonine kinase;protein_id=WP_032694696.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1017670 1018884 . - . ID=gene-PHA56_RS04875;Name=PHA56_RS04875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04875;old_locus_tag=PHA56_04875 NZ_CP116214.1 Protein Homology CDS 1017670 1018884 . - 0 ID=cds-WP_038424912.1;Parent=gene-PHA56_RS04875;Dbxref=Genbank:WP_038424912.1;Name=WP_038424912.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228585.1;locus_tag=PHA56_RS04875;product=acetate/propionate family kinase;protein_id=WP_038424912.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1018869 1019321 . - . ID=gene-PHA56_RS04880;Name=pduV;gbkey=Gene;gene=pduV;gene_biotype=protein_coding;locus_tag=PHA56_RS04880;old_locus_tag=PHA56_04880 NZ_CP116214.1 Protein Homology CDS 1018869 1019321 . - 0 ID=cds-WP_014226647.1;Parent=gene-PHA56_RS04880;Dbxref=Genbank:WP_014226647.1;Name=WP_014226647.1;gbkey=CDS;gene=pduV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461001.1;locus_tag=PHA56_RS04880;product=propanediol utilization protein PduV;protein_id=WP_014226647.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1019326 1019676 . - . ID=gene-PHA56_RS04885;Name=pduU;gbkey=Gene;gene=pduU;gene_biotype=protein_coding;locus_tag=PHA56_RS04885;old_locus_tag=PHA56_04885 NZ_CP116214.1 Protein Homology CDS 1019326 1019676 . - 0 ID=cds-WP_000441103.1;Parent=gene-PHA56_RS04885;Dbxref=Genbank:WP_000441103.1;Name=WP_000441103.1;gbkey=CDS;gene=pduU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461000.1;locus_tag=PHA56_RS04885;product=propanediol utilization microcompartment protein PduU;protein_id=WP_000441103.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1019676 1020230 . - . ID=gene-PHA56_RS04890;Name=pduT;gbkey=Gene;gene=pduT;gene_biotype=protein_coding;locus_tag=PHA56_RS04890;old_locus_tag=PHA56_04890 NZ_CP116214.1 Protein Homology CDS 1019676 1020230 . - 0 ID=cds-WP_004124543.1;Parent=gene-PHA56_RS04890;Dbxref=Genbank:WP_004124543.1;Name=WP_004124543.1;gbkey=CDS;gene=pduT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460999.1;locus_tag=PHA56_RS04890;product=propanediol utilization microcompartment protein PduT;protein_id=WP_004124543.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1020233 1021588 . - . ID=gene-PHA56_RS04895;Name=pduS;gbkey=Gene;gene=pduS;gene_biotype=protein_coding;locus_tag=PHA56_RS04895;old_locus_tag=PHA56_04895 NZ_CP116214.1 Protein Homology CDS 1020233 1021588 . - 0 ID=cds-WP_038424910.1;Parent=gene-PHA56_RS04895;Dbxref=Genbank:WP_038424910.1;Name=WP_038424910.1;gbkey=CDS;gene=pduS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460998.1;locus_tag=PHA56_RS04895;product=cobalamin reductase PduS;protein_id=WP_038424910.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1021585 1022697 . - . ID=gene-PHA56_RS04900;Name=pduQ;gbkey=Gene;gene=pduQ;gene_biotype=protein_coding;locus_tag=PHA56_RS04900;old_locus_tag=PHA56_04900 NZ_CP116214.1 Protein Homology CDS 1021585 1022697 . - 0 ID=cds-WP_032694693.1;Parent=gene-PHA56_RS04900;Dbxref=Genbank:WP_032694693.1;Name=WP_032694693.1;gbkey=CDS;gene=pduQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460997.1;locus_tag=PHA56_RS04900;product=1-propanol dehydrogenase PduQ;protein_id=WP_032694693.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1022709 1024100 . - . ID=gene-PHA56_RS04905;Name=pduP;gbkey=Gene;gene=pduP;gene_biotype=protein_coding;locus_tag=PHA56_RS04905;old_locus_tag=PHA56_04905 NZ_CP116214.1 Protein Homology CDS 1022709 1024100 . - 0 ID=cds-WP_014226644.1;Parent=gene-PHA56_RS04905;Dbxref=Genbank:WP_014226644.1;Name=WP_014226644.1;gbkey=CDS;gene=pduP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460996.1;locus_tag=PHA56_RS04905;product=CoA-acylating propionaldehyde dehydrogenase PduP;protein_id=WP_014226644.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1024097 1025107 . - . ID=gene-PHA56_RS04910;Name=pduO;gbkey=Gene;gene=pduO;gene_biotype=protein_coding;locus_tag=PHA56_RS04910;old_locus_tag=PHA56_04910 NZ_CP116214.1 Protein Homology CDS 1024097 1025107 . - 0 ID=cds-WP_038424909.1;Parent=gene-PHA56_RS04910;Dbxref=Genbank:WP_038424909.1;Name=WP_038424909.1;gbkey=CDS;gene=pduO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460995.1;locus_tag=PHA56_RS04910;product=two-domain cob(I)yrinic acid a%2Cc-diamide adenosyltransferase PduO;protein_id=WP_038424909.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1025117 1025392 . - . ID=gene-PHA56_RS04915;Name=pduN;gbkey=Gene;gene=pduN;gene_biotype=protein_coding;locus_tag=PHA56_RS04915;old_locus_tag=PHA56_04915 NZ_CP116214.1 Protein Homology CDS 1025117 1025392 . - 0 ID=cds-WP_004133641.1;Parent=gene-PHA56_RS04915;Dbxref=Genbank:WP_004133641.1;Name=WP_004133641.1;gbkey=CDS;gene=pduN;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228577.1;locus_tag=PHA56_RS04915;product=propanediol utilization microcompartment protein PduN;protein_id=WP_004133641.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1025396 1025887 . - . ID=gene-PHA56_RS04920;Name=pduM;gbkey=Gene;gene=pduM;gene_biotype=protein_coding;locus_tag=PHA56_RS04920;old_locus_tag=PHA56_04920 NZ_CP116214.1 Protein Homology CDS 1025396 1025887 . - 0 ID=cds-WP_038424908.1;Parent=gene-PHA56_RS04920;Dbxref=Genbank:WP_038424908.1;Name=WP_038424908.1;gbkey=CDS;gene=pduM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460993.1;locus_tag=PHA56_RS04920;product=microcompartment protein PduM;protein_id=WP_038424908.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1025884 1026516 . - . ID=gene-PHA56_RS04925;Name=PHA56_RS04925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04925;old_locus_tag=PHA56_04925 NZ_CP116214.1 Protein Homology CDS 1025884 1026516 . - 0 ID=cds-WP_014226641.1;Parent=gene-PHA56_RS04925;Dbxref=Genbank:WP_014226641.1;Name=WP_014226641.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460992.1;locus_tag=PHA56_RS04925;product=phosphate propanoyltransferase;protein_id=WP_014226641.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1026516 1026998 . - . ID=gene-PHA56_RS04930;Name=PHA56_RS04930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04930;old_locus_tag=PHA56_04930 NZ_CP116214.1 Protein Homology CDS 1026516 1026998 . - 0 ID=cds-WP_088167888.1;Parent=gene-PHA56_RS04930;Dbxref=Genbank:WP_088167888.1;Name=WP_088167888.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460991.3;locus_tag=PHA56_RS04930;product=BMC domain-containing protein;protein_id=WP_088167888.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1027002 1027277 . - . ID=gene-PHA56_RS04935;Name=pduJ;gbkey=Gene;gene=pduJ;gene_biotype=protein_coding;locus_tag=PHA56_RS04935;old_locus_tag=PHA56_04935 NZ_CP116214.1 Protein Homology CDS 1027002 1027277 . - 0 ID=cds-WP_004853788.1;Parent=gene-PHA56_RS04935;Dbxref=Genbank:WP_004853788.1;Name=WP_004853788.1;gbkey=CDS;gene=pduJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460990.1;locus_tag=PHA56_RS04935;product=propanediol utilization microcompartment protein PduJ;protein_id=WP_004853788.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1027270 1027647 . - . ID=gene-PHA56_RS04940;Name=pduH;gbkey=Gene;gene=pduH;gene_biotype=protein_coding;locus_tag=PHA56_RS04940;old_locus_tag=PHA56_04940 NZ_CP116214.1 Protein Homology CDS 1027270 1027647 . - 0 ID=cds-WP_014839408.1;Parent=gene-PHA56_RS04940;Dbxref=Genbank:WP_014839408.1;Name=WP_014839408.1;gbkey=CDS;gene=pduH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014839408.1;locus_tag=PHA56_RS04940;product=propanediol dehydratase reactivase beta subunit PduH;protein_id=WP_014839408.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1027637 1029469 . - . ID=gene-PHA56_RS04945;Name=pduG;gbkey=Gene;gene=pduG;gene_biotype=protein_coding;locus_tag=PHA56_RS04945;old_locus_tag=PHA56_04945 NZ_CP116214.1 Protein Homology CDS 1027637 1029469 . - 0 ID=cds-WP_014226638.1;Parent=gene-PHA56_RS04945;Dbxref=Genbank:WP_014226638.1;Name=WP_014226638.1;gbkey=CDS;gene=pduG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460988.1;locus_tag=PHA56_RS04945;product=propanediol dehydratase reactivase alpha subunit PduG;protein_id=WP_014226638.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1029675 1030196 . - . ID=gene-PHA56_RS04950;Name=pduE;gbkey=Gene;gene=pduE;gene_biotype=protein_coding;locus_tag=PHA56_RS04950;old_locus_tag=PHA56_04950 NZ_CP116214.1 Protein Homology CDS 1029675 1030196 . - 0 ID=cds-WP_004133648.1;Parent=gene-PHA56_RS04950;Dbxref=Genbank:WP_004133648.1;Name=WP_004133648.1;gbkey=CDS;gene=pduE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460987.1;locus_tag=PHA56_RS04950;product=propanediol dehydratase small subunit PduE;protein_id=WP_004133648.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1030211 1030876 . - . ID=gene-PHA56_RS04955;Name=pduD;gbkey=Gene;gene=pduD;gene_biotype=protein_coding;locus_tag=PHA56_RS04955;old_locus_tag=PHA56_04955 NZ_CP116214.1 Protein Homology CDS 1030211 1030876 . - 0 ID=cds-WP_038424907.1;Parent=gene-PHA56_RS04955;Dbxref=Genbank:WP_038424907.1;Name=WP_038424907.1;gbkey=CDS;gene=pduD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460986.1;locus_tag=PHA56_RS04955;product=propanediol dehydratase medium subunit PduD;protein_id=WP_038424907.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1030887 1032551 . - . ID=gene-PHA56_RS04960;Name=pduC;gbkey=Gene;gene=pduC;gene_biotype=protein_coding;locus_tag=PHA56_RS04960;old_locus_tag=PHA56_04960 NZ_CP116214.1 Protein Homology CDS 1030887 1032551 . - 0 ID=cds-WP_004105132.1;Parent=gene-PHA56_RS04960;Dbxref=Genbank:WP_004105132.1;Name=WP_004105132.1;gbkey=CDS;gene=pduC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460985.1;locus_tag=PHA56_RS04960;product=propanediol dehydratase large subunit PduC;protein_id=WP_004105132.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1032570 1033382 . - . ID=gene-PHA56_RS04965;Name=pduB;gbkey=Gene;gene=pduB;gene_biotype=protein_coding;locus_tag=PHA56_RS04965;old_locus_tag=PHA56_04965 NZ_CP116214.1 Protein Homology CDS 1032570 1033382 . - 0 ID=cds-WP_004205485.1;Parent=gene-PHA56_RS04965;Dbxref=Genbank:WP_004205485.1;Name=WP_004205485.1;Ontology_term=GO:0005198,GO:0031469;gbkey=CDS;gene=pduB;go_component=bacterial microcompartment|0031469||IEA;go_function=structural molecule activity|0005198||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228567.1;locus_tag=PHA56_RS04965;product=propanediol utilization microcompartment protein PduB;protein_id=WP_004205485.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1033379 1033663 . - . ID=gene-PHA56_RS04970;Name=pduA;gbkey=Gene;gene=pduA;gene_biotype=protein_coding;locus_tag=PHA56_RS04970;old_locus_tag=PHA56_04970 NZ_CP116214.1 Protein Homology CDS 1033379 1033663 . - 0 ID=cds-WP_001183618.1;Parent=gene-PHA56_RS04970;Dbxref=Genbank:WP_001183618.1;Name=WP_001183618.1;gbkey=CDS;gene=pduA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460983.1;locus_tag=PHA56_RS04970;product=propanediol utilization microcompartment protein PduA;protein_id=WP_001183618.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1034188 1034988 . + . ID=gene-PHA56_RS04975;Name=pduF;gbkey=Gene;gene=pduF;gene_biotype=protein_coding;locus_tag=PHA56_RS04975;old_locus_tag=PHA56_04975 NZ_CP116214.1 Protein Homology CDS 1034188 1034988 . + 0 ID=cds-WP_004105118.1;Parent=gene-PHA56_RS04975;Dbxref=Genbank:WP_004105118.1;Name=WP_004105118.1;gbkey=CDS;gene=pduF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004105118.1;locus_tag=PHA56_RS04975;product=propanediol diffusion facilitator PduF;protein_id=WP_004105118.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1035177 1036088 . + . ID=gene-PHA56_RS04980;Name=pocR;gbkey=Gene;gene=pocR;gene_biotype=protein_coding;locus_tag=PHA56_RS04980;old_locus_tag=PHA56_04980 NZ_CP116214.1 Protein Homology CDS 1035177 1036088 . + 0 ID=cds-WP_038424906.1;Parent=gene-PHA56_RS04980;Dbxref=Genbank:WP_038424906.1;Name=WP_038424906.1;gbkey=CDS;gene=pocR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004143938.1;locus_tag=PHA56_RS04980;product=regulatory protein PocR;protein_id=WP_038424906.1;transl_table=11 NZ_CP116214.1 cmsearch riboswitch 1036389 1036557 . + . ID=id-NZ_CP116214.1:1036389..1036557;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NZ_CP116214.1 RefSeq gene 1036645 1038024 . + . ID=gene-PHA56_RS04985;Name=PHA56_RS04985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04985;old_locus_tag=PHA56_04985 NZ_CP116214.1 Protein Homology CDS 1036645 1038024 . + 0 ID=cds-WP_032694687.1;Parent=gene-PHA56_RS04985;Dbxref=Genbank:WP_032694687.1;Name=WP_032694687.1;Ontology_term=GO:0042242;gbkey=CDS;go_function=cobyrinic acid a%2Cc-diamide synthase activity|0042242||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228564.1;locus_tag=PHA56_RS04985;product=cobyrinate a%2Cc-diamide synthase;protein_id=WP_032694687.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1038021 1038980 . + . ID=gene-PHA56_RS04990;Name=cbiB;gbkey=Gene;gene=cbiB;gene_biotype=protein_coding;locus_tag=PHA56_RS04990;old_locus_tag=PHA56_04990 NZ_CP116214.1 Protein Homology CDS 1038021 1038980 . + 0 ID=cds-WP_014839404.1;Parent=gene-PHA56_RS04990;Dbxref=Genbank:WP_014839404.1;Name=WP_014839404.1;Ontology_term=GO:0009236,GO:0016880;gbkey=CDS;gene=cbiB;go_function=acid-ammonia (or amide) ligase activity|0016880||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228563.1;locus_tag=PHA56_RS04990;product=adenosylcobinamide-phosphate synthase CbiB;protein_id=WP_014839404.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1038991 1039623 . + . ID=gene-PHA56_RS04995;Name=PHA56_RS04995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS04995;old_locus_tag=PHA56_04995 NZ_CP116214.1 Protein Homology CDS 1038991 1039623 . + 0 ID=cds-WP_004133657.1;Parent=gene-PHA56_RS04995;Dbxref=Genbank:WP_004133657.1;Name=WP_004133657.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228562.1;locus_tag=PHA56_RS04995;product=cobalt-precorrin-8 methylmutase;protein_id=WP_004133657.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1039620 1040759 . + . ID=gene-PHA56_RS05000;Name=cbiD;gbkey=Gene;gene=cbiD;gene_biotype=protein_coding;locus_tag=PHA56_RS05000;old_locus_tag=PHA56_05000 NZ_CP116214.1 Protein Homology CDS 1039620 1040759 . + 0 ID=cds-WP_032694686.1;Parent=gene-PHA56_RS05000;Dbxref=Genbank:WP_032694686.1;Name=WP_032694686.1;Ontology_term=GO:0009236,GO:0005737;gbkey=CDS;gene=cbiD;go_component=cytoplasm|0005737||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460977.1;locus_tag=PHA56_RS05000;product=cobalt-precorrin-5B (C(1))-methyltransferase CbiD;protein_id=WP_032694686.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1040753 1041358 . + . ID=gene-PHA56_RS05005;Name=PHA56_RS05005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS05005;old_locus_tag=PHA56_05005 NZ_CP116214.1 Protein Homology CDS 1040753 1041358 . + 0 ID=cds-WP_025107434.1;Parent=gene-PHA56_RS05005;Dbxref=Genbank:WP_025107434.1;Name=WP_025107434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228560.1;locus_tag=PHA56_RS05005;product=cobalt-precorrin-7 (C(5))-methyltransferase;protein_id=WP_025107434.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1041348 1041917 . + . ID=gene-PHA56_RS05010;Name=PHA56_RS05010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS05010;old_locus_tag=PHA56_05010 NZ_CP116214.1 Protein Homology CDS 1041348 1041917 . + 0 ID=cds-WP_032694685.1;Parent=gene-PHA56_RS05010;Dbxref=Genbank:WP_032694685.1;Name=WP_032694685.1;Ontology_term=GO:0009236,GO:0008276;gbkey=CDS;go_function=protein methyltransferase activity|0008276||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228559.1;locus_tag=PHA56_RS05010;product=decarboxylating cobalt-precorrin-6B (C(15))-methyltransferase;protein_id=WP_032694685.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1041910 1042683 . + . ID=gene-PHA56_RS05015;Name=PHA56_RS05015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS05015;old_locus_tag=PHA56_05015 NZ_CP116214.1 Protein Homology CDS 1041910 1042683 . + 0 ID=cds-WP_014226631.1;Parent=gene-PHA56_RS05015;Dbxref=Genbank:WP_014226631.1;Name=WP_014226631.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228558.1;locus_tag=PHA56_RS05015;product=cobalt-precorrin-4 methyltransferase;protein_id=WP_014226631.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1042664 1043719 . + . ID=gene-PHA56_RS05020;Name=cbiG;gbkey=Gene;gene=cbiG;gene_biotype=protein_coding;locus_tag=PHA56_RS05020;old_locus_tag=PHA56_05020 NZ_CP116214.1 Protein Homology CDS 1042664 1043719 . + 0 ID=cds-WP_038424905.1;Parent=gene-PHA56_RS05020;Dbxref=Genbank:WP_038424905.1;Name=WP_038424905.1;gbkey=CDS;gene=cbiG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460973.1;locus_tag=PHA56_RS05020;product=cobalt-precorrin 5A hydrolase;protein_id=WP_038424905.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1043719 1044444 . + . ID=gene-PHA56_RS05025;Name=PHA56_RS05025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS05025;old_locus_tag=PHA56_05025 NZ_CP116214.1 Protein Homology CDS 1043719 1044444 . + 0 ID=cds-WP_004105101.1;Parent=gene-PHA56_RS05025;Dbxref=Genbank:WP_004105101.1;Name=WP_004105101.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460972.1;locus_tag=PHA56_RS05025;product=precorrin-3B C(17)-methyltransferase;protein_id=WP_004105101.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1044441 1045226 . + . ID=gene-PHA56_RS05030;Name=PHA56_RS05030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS05030;old_locus_tag=PHA56_05030 NZ_CP116214.1 Protein Homology CDS 1044441 1045226 . + 0 ID=cds-WP_032694683.1;Parent=gene-PHA56_RS05030;Dbxref=Genbank:WP_032694683.1;Name=WP_032694683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016156865.1;locus_tag=PHA56_RS05030;product=cobalt-precorrin-6A reductase;protein_id=WP_032694683.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1045237 1046031 . + . ID=gene-PHA56_RS05035;Name=PHA56_RS05035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS05035;old_locus_tag=PHA56_05035 NZ_CP116214.1 Protein Homology CDS 1045237 1046031 . + 0 ID=cds-WP_014226628.1;Parent=gene-PHA56_RS05035;Dbxref=Genbank:WP_014226628.1;Name=WP_014226628.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460970.1;locus_tag=PHA56_RS05035;product=sirohydrochlorin cobaltochelatase;protein_id=WP_014226628.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1046028 1046741 . + . ID=gene-PHA56_RS05040;Name=PHA56_RS05040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS05040;old_locus_tag=PHA56_05040 NZ_CP116214.1 Protein Homology CDS 1046028 1046741 . + 0 ID=cds-WP_014226627.1;Parent=gene-PHA56_RS05040;Dbxref=Genbank:WP_014226627.1;Name=WP_014226627.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460969.1;locus_tag=PHA56_RS05040;product=cobalt-factor II C(20)-methyltransferase;protein_id=WP_014226627.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1046738 1047475 . + . ID=gene-PHA56_RS05045;Name=cbiM;gbkey=Gene;gene=cbiM;gene_biotype=protein_coding;locus_tag=PHA56_RS05045;old_locus_tag=PHA56_05045 NZ_CP116214.1 Protein Homology CDS 1046738 1047475 . + 0 ID=cds-WP_004124457.1;Parent=gene-PHA56_RS05045;Dbxref=Genbank:WP_004124457.1;Name=WP_004124457.1;Ontology_term=GO:0009236;gbkey=CDS;gene=cbiM;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460968.3;locus_tag=PHA56_RS05045;product=cobalt ECF transporter S component CbiM;protein_id=WP_004124457.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1047477 1047758 . + . ID=gene-PHA56_RS05050;Name=PHA56_RS05050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS05050;old_locus_tag=PHA56_05050 NZ_CP116214.1 Protein Homology CDS 1047477 1047758 . + 0 ID=cds-WP_004133685.1;Parent=gene-PHA56_RS05050;Dbxref=Genbank:WP_004133685.1;Name=WP_004133685.1;Ontology_term=GO:0006824,GO:0009236,GO:0015087,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=cobalt ion transmembrane transporter activity|0015087||IEA;go_process=cobalt ion transport|0006824||IEA,cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228551.1;locus_tag=PHA56_RS05050;product=energy-coupling factor ABC transporter substrate-binding protein;protein_id=WP_004133685.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1047745 1048422 . + . ID=gene-PHA56_RS05055;Name=PHA56_RS05055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS05055;old_locus_tag=PHA56_05055 NZ_CP116214.1 Protein Homology CDS 1047745 1048422 . + 0 ID=cds-WP_038424904.1;Parent=gene-PHA56_RS05055;Dbxref=Genbank:WP_038424904.1;Name=WP_038424904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228550.1;locus_tag=PHA56_RS05055;product=energy-coupling factor ABC transporter transmembrane protein;protein_id=WP_038424904.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1048431 1049246 . + . ID=gene-PHA56_RS05060;Name=PHA56_RS05060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS05060;old_locus_tag=PHA56_05060 NZ_CP116214.1 Protein Homology CDS 1048431 1049246 . + 0 ID=cds-WP_038424903.1;Parent=gene-PHA56_RS05060;Dbxref=Genbank:WP_038424903.1;Name=WP_038424903.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228549.1;locus_tag=PHA56_RS05060;product=energy-coupling factor ABC transporter ATP-binding protein;protein_id=WP_038424903.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1049243 1050766 . + . ID=gene-PHA56_RS05065;Name=PHA56_RS05065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS05065;old_locus_tag=PHA56_05065 NZ_CP116214.1 Protein Homology CDS 1049243 1050766 . + 0 ID=cds-WP_038424902.1;Parent=gene-PHA56_RS05065;Dbxref=Genbank:WP_038424902.1;Name=WP_038424902.1;Ontology_term=GO:0009236,GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228548.1;locus_tag=PHA56_RS05065;product=cobyric acid synthase;protein_id=WP_038424902.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1050760 1051305 . + . ID=gene-PHA56_RS05070;Name=cobU;gbkey=Gene;gene=cobU;gene_biotype=protein_coding;locus_tag=PHA56_RS05070;old_locus_tag=PHA56_05070 NZ_CP116214.1 Protein Homology CDS 1050760 1051305 . + 0 ID=cds-WP_271292961.1;Parent=gene-PHA56_RS05070;Dbxref=Genbank:WP_271292961.1;Name=WP_271292961.1;Ontology_term=GO:0009236,GO:0000166,GO:0043752;gbkey=CDS;gene=cobU;go_function=nucleotide binding|0000166||IEA,adenosylcobinamide kinase activity|0043752||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228547.1;locus_tag=PHA56_RS05070;product=bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase;protein_id=WP_271292961.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1051380 1052435 . + . ID=gene-PHA56_RS05075;Name=cobT;gbkey=Gene;gene=cobT;gene_biotype=protein_coding;locus_tag=PHA56_RS05075;old_locus_tag=PHA56_05075 NZ_CP116214.1 Protein Homology CDS 1051380 1052435 . + 0 ID=cds-WP_014839394.1;Parent=gene-PHA56_RS05075;Dbxref=Genbank:WP_014839394.1;Name=WP_014839394.1;Ontology_term=GO:0009236,GO:0008939;gbkey=CDS;gene=cobT;go_function=nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity|0008939||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228546.1;locus_tag=PHA56_RS05075;product=nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase;protein_id=WP_014839394.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1052535 1052611 . - . ID=gene-PHA56_RS05080;Name=PHA56_RS05080;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA56_RS05080;old_locus_tag=PHA56_05080 NZ_CP116214.1 tRNAscan-SE tRNA 1052535 1052611 . - . ID=rna-PHA56_RS05080;Parent=gene-PHA56_RS05080;anticodon=(pos:complement(1052575..1052577));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS05080;product=tRNA-Met NZ_CP116214.1 tRNAscan-SE exon 1052535 1052611 . - . ID=exon-PHA56_RS05080-1;Parent=rna-PHA56_RS05080;anticodon=(pos:complement(1052575..1052577));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS05080;product=tRNA-Met NZ_CP116214.1 RefSeq gene 1052656 1052732 . - . ID=gene-PHA56_RS05085;Name=PHA56_RS05085;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA56_RS05085;old_locus_tag=PHA56_05085 NZ_CP116214.1 tRNAscan-SE tRNA 1052656 1052732 . - . ID=rna-PHA56_RS05085;Parent=gene-PHA56_RS05085;anticodon=(pos:complement(1052696..1052698));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS05085;product=tRNA-Met NZ_CP116214.1 tRNAscan-SE exon 1052656 1052732 . - . ID=exon-PHA56_RS05085-1;Parent=rna-PHA56_RS05085;anticodon=(pos:complement(1052696..1052698));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS05085;product=tRNA-Met NZ_CP116214.1 RefSeq gene 1052780 1052856 . - . ID=gene-PHA56_RS05090;Name=PHA56_RS05090;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA56_RS05090;old_locus_tag=PHA56_05090 NZ_CP116214.1 tRNAscan-SE tRNA 1052780 1052856 . - . ID=rna-PHA56_RS05090;Parent=gene-PHA56_RS05090;anticodon=(pos:complement(1052820..1052822));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS05090;product=tRNA-Met NZ_CP116214.1 tRNAscan-SE exon 1052780 1052856 . - . ID=exon-PHA56_RS05090-1;Parent=rna-PHA56_RS05090;anticodon=(pos:complement(1052820..1052822));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS05090;product=tRNA-Met NZ_CP116214.1 RefSeq gene 1053068 1054165 . + . ID=gene-PHA56_RS05095;Name=mltA;gbkey=Gene;gene=mltA;gene_biotype=protein_coding;locus_tag=PHA56_RS05095;old_locus_tag=PHA56_05095 NZ_CP116214.1 Protein Homology CDS 1053068 1054165 . + 0 ID=cds-WP_004124438.1;Parent=gene-PHA56_RS05095;Dbxref=Genbank:WP_004124438.1;Name=WP_004124438.1;Ontology_term=GO:0009254,GO:0004553,GO:0019867;gbkey=CDS;gene=mltA;go_component=outer membrane|0019867||IEA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=peptidoglycan turnover|0009254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008785702.1;locus_tag=PHA56_RS05095;product=murein transglycosylase A;protein_id=WP_004124438.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1054280 1055089 . + . ID=gene-PHA56_RS05100;Name=tcdA;gbkey=Gene;gene=tcdA;gene_biotype=protein_coding;locus_tag=PHA56_RS05100;old_locus_tag=PHA56_05100 NZ_CP116214.1 Protein Homology CDS 1054280 1055089 . + 0 ID=cds-WP_009651598.1;Parent=gene-PHA56_RS05100;Dbxref=Genbank:WP_009651598.1;Name=WP_009651598.1;Ontology_term=GO:0008641;gbkey=CDS;gene=tcdA;go_function=ubiquitin-like modifier activating enzyme activity|0008641||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009651598.1;locus_tag=PHA56_RS05100;product=tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA;protein_id=WP_009651598.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1055212 1055649 . - . ID=gene-PHA56_RS05105;Name=csdE;gbkey=Gene;gene=csdE;gene_biotype=protein_coding;locus_tag=PHA56_RS05105;old_locus_tag=PHA56_05105 NZ_CP116214.1 Protein Homology CDS 1055212 1055649 . - 0 ID=cds-WP_014839393.1;Parent=gene-PHA56_RS05105;Dbxref=Genbank:WP_014839393.1;Name=WP_014839393.1;gbkey=CDS;gene=csdE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226622.1;locus_tag=PHA56_RS05105;product=cysteine desulfurase sulfur acceptor subunit CsdE;protein_id=WP_014839393.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1055649 1056854 . - . ID=gene-PHA56_RS05110;Name=csdA;gbkey=Gene;gene=csdA;gene_biotype=protein_coding;locus_tag=PHA56_RS05110;old_locus_tag=PHA56_05110 NZ_CP116214.1 Protein Homology CDS 1055649 1056854 . - 0 ID=cds-WP_038424901.1;Parent=gene-PHA56_RS05110;Dbxref=Genbank:WP_038424901.1;Name=WP_038424901.1;Ontology_term=GO:0006534,GO:0016226,GO:0030170,GO:0031071;gbkey=CDS;gene=csdA;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine desulfurase activity|0031071||IEA;go_process=cysteine metabolic process|0006534||IEA,iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228542.1;locus_tag=PHA56_RS05110;product=cysteine desulfurase CsdA;protein_id=WP_038424901.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1057053 1057277 . + . ID=gene-PHA56_RS05115;Name=PHA56_RS05115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS05115;old_locus_tag=PHA56_05115 NZ_CP116214.1 Protein Homology CDS 1057053 1057277 . + 0 ID=cds-WP_014226620.1;Parent=gene-PHA56_RS05115;Dbxref=Genbank:WP_014226620.1;Name=WP_014226620.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417289.2;locus_tag=PHA56_RS05115;product=YgdI/YgdR family lipoprotein;protein_id=WP_014226620.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1057631 1058548 . + . ID=gene-PHA56_RS05120;Name=gcvA;gbkey=Gene;gene=gcvA;gene_biotype=protein_coding;locus_tag=PHA56_RS05120;old_locus_tag=PHA56_05120 NZ_CP116214.1 Protein Homology CDS 1057631 1058548 . + 0 ID=cds-WP_004114967.1;Parent=gene-PHA56_RS05120;Dbxref=Genbank:WP_004114967.1;Name=WP_004114967.1;gbkey=CDS;gene=gcvA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130970.1;locus_tag=PHA56_RS05120;product=glycine cleavage system transcriptional regulator GcvA;protein_id=WP_004114967.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1058568 1058963 . + . ID=gene-PHA56_RS05125;Name=PHA56_RS05125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS05125;old_locus_tag=PHA56_05125 NZ_CP116214.1 Protein Homology CDS 1058568 1058963 . + 0 ID=cds-WP_119834343.1;Parent=gene-PHA56_RS05125;Dbxref=Genbank:WP_119834343.1;Name=WP_119834343.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228539.1;locus_tag=PHA56_RS05125;product=DUF423 domain-containing protein;protein_id=WP_119834343.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1058956 1060056 . + . ID=gene-PHA56_RS05130;Name=rlmM;gbkey=Gene;gene=rlmM;gene_biotype=protein_coding;locus_tag=PHA56_RS05130;old_locus_tag=PHA56_05130 NZ_CP116214.1 Protein Homology CDS 1058956 1060056 . + 0 ID=cds-WP_014226619.1;Parent=gene-PHA56_RS05130;Dbxref=Genbank:WP_014226619.1;Name=WP_014226619.1;Ontology_term=GO:0008168;gbkey=CDS;gene=rlmM;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010435097.1;locus_tag=PHA56_RS05130;product=23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM;protein_id=WP_014226619.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1060117 1060827 . - . ID=gene-PHA56_RS05135;Name=fucR;gbkey=Gene;gene=fucR;gene_biotype=protein_coding;locus_tag=PHA56_RS05135;old_locus_tag=PHA56_05135 NZ_CP116214.1 Protein Homology CDS 1060117 1060827 . - 0 ID=cds-WP_032694679.1;Parent=gene-PHA56_RS05135;Dbxref=Genbank:WP_032694679.1;Name=WP_032694679.1;gbkey=CDS;gene=fucR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004105071.1;locus_tag=PHA56_RS05135;product=L-fucose operon activator;protein_id=WP_032694679.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1060885 1061307 . - . ID=gene-PHA56_RS05140;Name=fucU;gbkey=Gene;gene=fucU;gene_biotype=protein_coding;locus_tag=PHA56_RS05140;old_locus_tag=PHA56_05140 NZ_CP116214.1 Protein Homology CDS 1060885 1061307 . - 0 ID=cds-WP_004853682.1;Parent=gene-PHA56_RS05140;Dbxref=Genbank:WP_004853682.1;Name=WP_004853682.1;Ontology_term=GO:0042354,GO:0016854,GO:0042806;gbkey=CDS;gene=fucU;go_function=racemase and epimerase activity|0016854||IEA,fucose binding|0042806||IEA;go_process=L-fucose metabolic process|0042354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311691.1;locus_tag=PHA56_RS05140;product=L-fucose mutarotase;protein_id=WP_004853682.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1061309 1062727 . - . ID=gene-PHA56_RS05145;Name=fucK;gbkey=Gene;gene=fucK;gene_biotype=protein_coding;locus_tag=PHA56_RS05145;old_locus_tag=PHA56_05145 NZ_CP116214.1 Protein Homology CDS 1061309 1062727 . - 0 ID=cds-WP_014226617.1;Parent=gene-PHA56_RS05145;Dbxref=Genbank:WP_014226617.1;Name=WP_014226617.1;Ontology_term=GO:0042355,GO:0008737;gbkey=CDS;gene=fucK;go_function=L-fuculokinase activity|0008737||IEA;go_process=L-fucose catabolic process|0042355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461896.1;locus_tag=PHA56_RS05145;product=L-fuculokinase;protein_id=WP_014226617.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1062831 1064606 . - . ID=gene-PHA56_RS05150;Name=fucI;gbkey=Gene;gene=fucI;gene_biotype=protein_coding;locus_tag=PHA56_RS05150;old_locus_tag=PHA56_05150 NZ_CP116214.1 Protein Homology CDS 1062831 1064606 . - 0 ID=cds-WP_025108016.1;Parent=gene-PHA56_RS05150;Dbxref=Genbank:WP_025108016.1;Name=WP_025108016.1;Ontology_term=GO:0006005,GO:0008736;gbkey=CDS;gene=fucI;go_function=L-fucose isomerase activity|0008736||IEA;go_process=L-fucose biosynthetic process|0006005||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461895.1;locus_tag=PHA56_RS05150;product=L-fucose isomerase;protein_id=WP_025108016.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1064638 1065948 . - . ID=gene-PHA56_RS05155;Name=fucP;gbkey=Gene;gene=fucP;gene_biotype=protein_coding;locus_tag=PHA56_RS05155;old_locus_tag=PHA56_05155 NZ_CP116214.1 Protein Homology CDS 1064638 1065948 . - 0 ID=cds-WP_004853675.1;Parent=gene-PHA56_RS05155;Dbxref=Genbank:WP_004853675.1;Name=WP_004853675.1;Ontology_term=GO:0015756,GO:0015150;gbkey=CDS;gene=fucP;go_function=fucose transmembrane transporter activity|0015150||IEA;go_process=fucose transmembrane transport|0015756||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417281.1;locus_tag=PHA56_RS05155;product=L-fucose:H+ symporter permease;protein_id=WP_004853675.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1066509 1067156 . + . ID=gene-PHA56_RS05160;Name=fucA;gbkey=Gene;gene=fucA;gene_biotype=protein_coding;locus_tag=PHA56_RS05160;old_locus_tag=PHA56_05160 NZ_CP116214.1 Protein Homology CDS 1066509 1067156 . + 0 ID=cds-WP_004853673.1;Parent=gene-PHA56_RS05160;Dbxref=Genbank:WP_004853673.1;Name=WP_004853673.1;Ontology_term=GO:0042355;gbkey=CDS;gene=fucA;go_process=L-fucose catabolic process|0042355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461894.1;locus_tag=PHA56_RS05160;product=L-fuculose-phosphate aldolase;protein_id=WP_004853673.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1067450 1068205 . - . ID=gene-PHA56_RS05165;Name=xni;gbkey=Gene;gene=xni;gene_biotype=protein_coding;locus_tag=PHA56_RS05165;old_locus_tag=PHA56_05165 NZ_CP116214.1 Protein Homology CDS 1067450 1068205 . - 0 ID=cds-WP_025108014.1;Parent=gene-PHA56_RS05165;Dbxref=Genbank:WP_025108014.1;Name=WP_025108014.1;Ontology_term=GO:0033567,GO:0003677,GO:0017108;gbkey=CDS;gene=xni;go_function=DNA binding|0003677||IEA,5'-flap endonuclease activity|0017108||IEA;go_process=DNA replication%2C Okazaki fragment processing|0033567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228529.1;locus_tag=PHA56_RS05165;product=flap endonuclease Xni;protein_id=WP_025108014.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1068315 1070258 . - . ID=gene-PHA56_RS05170;Name=PHA56_RS05170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS05170;old_locus_tag=PHA56_05170 NZ_CP116214.1 Protein Homology CDS 1068315 1070258 . - 0 ID=cds-WP_014226612.1;Parent=gene-PHA56_RS05170;Dbxref=Genbank:WP_014226612.1;Name=WP_014226612.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004867018.1;locus_tag=PHA56_RS05170;product=sigma-54-dependent Fis family transcriptional regulator;protein_id=WP_014226612.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1070529 1071701 . + . ID=gene-PHA56_RS05175;Name=ssuD;gbkey=Gene;gene=ssuD;gene_biotype=protein_coding;locus_tag=PHA56_RS05175;old_locus_tag=PHA56_05175 NZ_CP116214.1 Protein Homology CDS 1070529 1071701 . + 0 ID=cds-WP_014226611.1;Parent=gene-PHA56_RS05175;Dbxref=Genbank:WP_014226611.1;Name=WP_014226611.1;Ontology_term=GO:0006790,GO:0008726,GO:0010181;gbkey=CDS;gene=ssuD;go_function=alkanesulfonate monooxygenase activity|0008726||IEA,FMN binding|0010181||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228526.1;locus_tag=PHA56_RS05175;product=FMNH2-dependent alkanesulfonate monooxygenase;protein_id=WP_014226611.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1071743 1073140 . + . ID=gene-PHA56_RS05180;Name=PHA56_RS05180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS05180;old_locus_tag=PHA56_05180 NZ_CP116214.1 Protein Homology CDS 1071743 1073140 . + 0 ID=cds-WP_038424900.1;Parent=gene-PHA56_RS05180;Dbxref=Genbank:WP_038424900.1;Name=WP_038424900.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004181126.1;locus_tag=PHA56_RS05180;product=FAD-dependent oxidoreductase;protein_id=WP_038424900.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1073214 1074620 . + . ID=gene-PHA56_RS05185;Name=PHA56_RS05185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS05185;old_locus_tag=PHA56_05185 NZ_CP116214.1 Protein Homology CDS 1073214 1074620 . + 0 ID=cds-WP_014226609.1;Parent=gene-PHA56_RS05185;Dbxref=Genbank:WP_014226609.1;Name=WP_014226609.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228524.1;locus_tag=PHA56_RS05185;product=LLM class flavin-dependent oxidoreductase;protein_id=WP_014226609.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1074786 1075727 . - . ID=gene-PHA56_RS05190;Name=PHA56_RS05190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS05190;old_locus_tag=PHA56_05190 NZ_CP116214.1 Protein Homology CDS 1074786 1075727 . - 0 ID=cds-WP_189087259.1;Parent=gene-PHA56_RS05190;Dbxref=Genbank:WP_189087259.1;Name=WP_189087259.1;Ontology_term=GO:0042626,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004124383.1;locus_tag=PHA56_RS05190;product=aliphatic sulfonate ABC transporter substrate-binding protein;protein_id=WP_189087259.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1075876 1077243 . - . ID=gene-PHA56_RS05195;Name=PHA56_RS05195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS05195;old_locus_tag=PHA56_05195 NZ_CP116214.1 Protein Homology CDS 1075876 1077243 . - 0 ID=cds-WP_014226607.1;Parent=gene-PHA56_RS05195;Dbxref=Genbank:WP_014226607.1;Name=WP_014226607.1;Ontology_term=GO:0009063,GO:0003941,GO:0051539;gbkey=CDS;go_function=L-serine ammonia-lyase activity|0003941||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=amino acid catabolic process|0009063||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228517.1;locus_tag=PHA56_RS05195;product=L-serine ammonia-lyase;protein_id=WP_014226607.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1077294 1078583 . - . ID=gene-PHA56_RS05200;Name=PHA56_RS05200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS05200;old_locus_tag=PHA56_05200 NZ_CP116214.1 Protein Homology CDS 1077294 1078583 . - 0 ID=cds-WP_004124376.1;Parent=gene-PHA56_RS05200;Dbxref=Genbank:WP_004124376.1;Name=WP_004124376.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228516.1;locus_tag=PHA56_RS05200;product=HAAAP family serine/threonine permease;protein_id=WP_004124376.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1079128 1080495 . - . ID=gene-PHA56_RS05205;Name=ppnN;gbkey=Gene;gene=ppnN;gene_biotype=protein_coding;locus_tag=PHA56_RS05205;old_locus_tag=PHA56_05205 NZ_CP116214.1 Protein Homology CDS 1079128 1080495 . - 0 ID=cds-WP_004853652.1;Parent=gene-PHA56_RS05205;Dbxref=Genbank:WP_004853652.1;Name=WP_004853652.1;gbkey=CDS;gene=ppnN;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228515.1;locus_tag=PHA56_RS05205;product=nucleotide 5'-monophosphate nucleosidase PpnN;protein_id=WP_004853652.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1080607 1081452 . - . ID=gene-PHA56_RS05210;Name=queF;gbkey=Gene;gene=queF;gene_biotype=protein_coding;locus_tag=PHA56_RS05210;old_locus_tag=PHA56_05210 NZ_CP116214.1 Protein Homology CDS 1080607 1081452 . - 0 ID=cds-WP_004853651.1;Parent=gene-PHA56_RS05210;Dbxref=Genbank:WP_004853651.1;Name=WP_004853651.1;Note=Catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis;Ontology_term=GO:0008616,GO:0033739,GO:0043867;gbkey=CDS;gene=queF;go_function=preQ1 synthase activity|0033739||IEA,7-cyano-7-deazaguanine tRNA-ribosyltransferase activity|0043867||IEA;go_process=queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228514.1;locus_tag=PHA56_RS05210;product=NADPH-dependent 7-cyano-7-deazaguanine reductase QueF;protein_id=WP_004853651.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1081522 1082079 . + . ID=gene-PHA56_RS05215;Name=syd;gbkey=Gene;gene=syd;gene_biotype=protein_coding;locus_tag=PHA56_RS05215;old_locus_tag=PHA56_05215 NZ_CP116214.1 Protein Homology CDS 1081522 1082079 . + 0 ID=cds-WP_014226606.1;Parent=gene-PHA56_RS05215;Dbxref=Genbank:WP_014226606.1;Name=WP_014226606.1;Ontology_term=GO:0009898;gbkey=CDS;gene=syd;go_component=cytoplasmic side of plasma membrane|0009898||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228513.1;locus_tag=PHA56_RS05215;product=SecY-interacting protein;protein_id=WP_014226606.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1082713 1083042 . + . ID=gene-PHA56_RS05220;Name=PHA56_RS05220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS05220;old_locus_tag=PHA56_05220 NZ_CP116214.1 Protein Homology CDS 1082713 1083042 . + 0 ID=cds-WP_038424898.1;Parent=gene-PHA56_RS05220;Dbxref=Genbank:WP_038424898.1;Name=WP_038424898.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228512.1;locus_tag=PHA56_RS05220;product=YqcC family protein;protein_id=WP_038424898.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1083042 1083836 . + . ID=gene-PHA56_RS05225;Name=truC;gbkey=Gene;gene=truC;gene_biotype=protein_coding;locus_tag=PHA56_RS05225;old_locus_tag=PHA56_05225 NZ_CP116214.1 Protein Homology CDS 1083042 1083836 . + 0 ID=cds-WP_014226603.1;Parent=gene-PHA56_RS05225;Dbxref=Genbank:WP_014226603.1;Name=WP_014226603.1;Ontology_term=GO:0001522,GO:0009982;gbkey=CDS;gene=truC;go_function=pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228511.1;locus_tag=PHA56_RS05225;product=tRNA pseudouridine(65) synthase TruC;protein_id=WP_014226603.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1083839 1084282 . + . ID=gene-PHA56_RS05230;Name=PHA56_RS05230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS05230;old_locus_tag=PHA56_05230 NZ_CP116214.1 Protein Homology CDS 1083839 1084282 . + 0 ID=cds-WP_014226602.1;Parent=gene-PHA56_RS05230;Dbxref=Genbank:WP_014226602.1;Name=WP_014226602.1;Ontology_term=GO:0010181;gbkey=CDS;go_function=FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012540723.1;locus_tag=PHA56_RS05230;product=flavodoxin;protein_id=WP_014226602.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1084767 1086125 . + . ID=gene-PHA56_RS05235;Name=gudP;gbkey=Gene;gene=gudP;gene_biotype=protein_coding;locus_tag=PHA56_RS05235;old_locus_tag=PHA56_05235 NZ_CP116214.1 Protein Homology CDS 1084767 1086125 . + 0 ID=cds-WP_004124361.1;Parent=gene-PHA56_RS05235;Dbxref=Genbank:WP_004124361.1;Name=WP_004124361.1;gbkey=CDS;gene=gudP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004124361.1;locus_tag=PHA56_RS05235;product=galactarate/glucarate/glycerate transporter GudP;protein_id=WP_004124361.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1086122 1087462 . + . ID=gene-PHA56_RS05240;Name=PHA56_RS05240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS05240;old_locus_tag=PHA56_05240 NZ_CP116214.1 Protein Homology CDS 1086122 1087462 . + 0 ID=cds-WP_014226601.1;Parent=gene-PHA56_RS05240;Dbxref=Genbank:WP_014226601.1;Name=WP_014226601.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461882.1;locus_tag=PHA56_RS05240;product=enolase C-terminal domain-like protein;protein_id=WP_014226601.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1087482 1088822 . + . ID=gene-PHA56_RS05245;Name=gudD;gbkey=Gene;gene=gudD;gene_biotype=protein_coding;locus_tag=PHA56_RS05245;old_locus_tag=PHA56_05245 NZ_CP116214.1 Protein Homology CDS 1087482 1088822 . + 0 ID=cds-WP_038424897.1;Parent=gene-PHA56_RS05245;Dbxref=Genbank:WP_038424897.1;Name=WP_038424897.1;Ontology_term=GO:0019394,GO:0000287,GO:0008872;gbkey=CDS;gene=gudD;go_function=magnesium ion binding|0000287||IEA,glucarate dehydratase activity|0008872||IEA;go_process=glucarate catabolic process|0019394||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311674.1;locus_tag=PHA56_RS05245;product=glucarate dehydratase;protein_id=WP_038424897.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1088894 1090033 . + . ID=gene-PHA56_RS05250;Name=PHA56_RS05250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS05250;old_locus_tag=PHA56_05250 NZ_CP116214.1 Protein Homology CDS 1088894 1090033 . + 0 ID=cds-WP_014226599.1;Parent=gene-PHA56_RS05250;Dbxref=Genbank:WP_014226599.1;Name=WP_014226599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009651594.1;locus_tag=PHA56_RS05250;product=glycerate kinase;protein_id=WP_014226599.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1090083 1092836 . - . ID=gene-PHA56_RS05255;Name=barA;gbkey=Gene;gene=barA;gene_biotype=protein_coding;locus_tag=PHA56_RS05255;old_locus_tag=PHA56_05255 NZ_CP116214.1 Protein Homology CDS 1090083 1092836 . - 0 ID=cds-WP_014226598.1;Parent=gene-PHA56_RS05255;Dbxref=Genbank:WP_014226598.1;Name=WP_014226598.1;Ontology_term=GO:0000160,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=barA;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228505.1;locus_tag=PHA56_RS05255;product=two-component sensor histidine kinase BarA;protein_id=WP_014226598.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1092959 1094302 . + . ID=gene-PHA56_RS05260;Name=rlmD;gbkey=Gene;gene=rlmD;gene_biotype=protein_coding;locus_tag=PHA56_RS05260;old_locus_tag=PHA56_05260 NZ_CP116214.1 Protein Homology CDS 1092959 1094302 . + 0 ID=cds-WP_014226597.1;Parent=gene-PHA56_RS05260;Dbxref=Genbank:WP_014226597.1;Name=WP_014226597.1;Ontology_term=GO:0006396,GO:0008173;gbkey=CDS;gene=rlmD;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016807597.1;locus_tag=PHA56_RS05260;product=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD;protein_id=WP_014226597.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1094400 1096637 . + . ID=gene-PHA56_RS05265;Name=relA;gbkey=Gene;gene=relA;gene_biotype=protein_coding;locus_tag=PHA56_RS05265;old_locus_tag=PHA56_05265 NZ_CP116214.1 Protein Homology CDS 1094400 1096637 . + 0 ID=cds-WP_004853643.1;Parent=gene-PHA56_RS05265;Dbxref=Genbank:WP_004853643.1;Name=WP_004853643.1;Ontology_term=GO:0015969;gbkey=CDS;gene=relA;go_process=guanosine tetraphosphate metabolic process|0015969||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228503.1;locus_tag=PHA56_RS05265;product=GTP diphosphokinase;protein_id=WP_004853643.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1096706 1097497 . + . ID=gene-PHA56_RS05270;Name=mazG;gbkey=Gene;gene=mazG;gene_biotype=protein_coding;locus_tag=PHA56_RS05270;old_locus_tag=PHA56_05270 NZ_CP116214.1 Protein Homology CDS 1096706 1097497 . + 0 ID=cds-WP_271292962.1;Parent=gene-PHA56_RS05270;Dbxref=Genbank:WP_271292962.1;Name=WP_271292962.1;gbkey=CDS;gene=mazG;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228502.1;locus_tag=PHA56_RS05270;product=nucleoside triphosphate pyrophosphohydrolase;protein_id=WP_271292962.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1097725 1099362 . + . ID=gene-PHA56_RS05275;Name=pyrG;gbkey=Gene;gene=pyrG;gene_biotype=protein_coding;locus_tag=PHA56_RS05275;old_locus_tag=PHA56_05275 NZ_CP116214.1 Protein Homology CDS 1097725 1099362 . + 0 ID=cds-WP_004105009.1;Parent=gene-PHA56_RS05275;Dbxref=Genbank:WP_004105009.1;Name=WP_004105009.1;Ontology_term=GO:0009220,GO:0003883;gbkey=CDS;gene=pyrG;go_function=CTP synthase activity|0003883||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130912.1;locus_tag=PHA56_RS05275;product=CTP synthase (glutamine hydrolyzing);protein_id=WP_004105009.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1099443 1100741 . + . ID=gene-PHA56_RS05280;Name=eno;gbkey=Gene;gene=eno;gene_biotype=protein_coding;locus_tag=PHA56_RS05280;old_locus_tag=PHA56_05280 NZ_CP116214.1 Protein Homology CDS 1099443 1100741 . + 0 ID=cds-WP_004105008.1;Parent=gene-PHA56_RS05280;Dbxref=Genbank:WP_004105008.1;Name=WP_004105008.1;Ontology_term=GO:0006096,GO:0004634;gbkey=CDS;gene=eno;go_function=phosphopyruvate hydratase activity|0004634||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020456663.1;locus_tag=PHA56_RS05280;product=phosphopyruvate hydratase;protein_id=WP_004105008.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1100808 1101917 . - . ID=gene-PHA56_RS05285;Name=PHA56_RS05285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS05285;old_locus_tag=PHA56_05285 NZ_CP116214.1 Protein Homology CDS 1100808 1101917 . - 0 ID=cds-WP_014226595.1;Parent=gene-PHA56_RS05285;Dbxref=Genbank:WP_014226595.1;Name=WP_014226595.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228499.1;locus_tag=PHA56_RS05285;product=SDR family oxidoreductase;protein_id=WP_014226595.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1102378 1103049 . + . ID=gene-PHA56_RS05290;Name=queE;gbkey=Gene;gene=queE;gene_biotype=protein_coding;locus_tag=PHA56_RS05290;old_locus_tag=PHA56_05290 NZ_CP116214.1 Protein Homology CDS 1102378 1103049 . + 0 ID=cds-WP_004124321.1;Parent=gene-PHA56_RS05290;Dbxref=Genbank:WP_004124321.1;Name=WP_004124321.1;Ontology_term=GO:0006400,GO:0051539,GO:1904047;gbkey=CDS;gene=queE;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001199960.1;locus_tag=PHA56_RS05290;product=7-carboxy-7-deazaguanine synthase QueE;protein_id=WP_004124321.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1103107 1103469 . - . ID=gene-PHA56_RS05295;Name=queD;gbkey=Gene;gene=queD;gene_biotype=protein_coding;locus_tag=PHA56_RS05295;old_locus_tag=PHA56_05295 NZ_CP116214.1 Protein Homology CDS 1103107 1103469 . - 0 ID=cds-WP_004853637.1;Parent=gene-PHA56_RS05295;Dbxref=Genbank:WP_004853637.1;Name=WP_004853637.1;Ontology_term=GO:0008616,GO:0003824;gbkey=CDS;gene=queD;go_function=catalytic activity|0003824||IEA;go_process=queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461870.1;locus_tag=PHA56_RS05295;product=6-carboxytetrahydropterin synthase QueD;protein_id=WP_004853637.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1103900 1105699 . + . ID=gene-PHA56_RS05300;Name=cysJ;gbkey=Gene;gene=cysJ;gene_biotype=protein_coding;locus_tag=PHA56_RS05300;old_locus_tag=PHA56_05300 NZ_CP116214.1 Protein Homology CDS 1103900 1105699 . + 0 ID=cds-WP_014226594.1;Parent=gene-PHA56_RS05300;Dbxref=Genbank:WP_014226594.1;Name=WP_014226594.1;Ontology_term=GO:0000103,GO:0019344,GO:0004783,GO:0010181,GO:0050660;gbkey=CDS;gene=cysJ;go_function=sulfite reductase (NADPH) activity|0004783||IEA,FMN binding|0010181||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=sulfate assimilation|0000103||IEA,cysteine biosynthetic process|0019344||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708562.1;locus_tag=PHA56_RS05300;product=NADPH-dependent assimilatory sulfite reductase flavoprotein subunit;protein_id=WP_014226594.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1105699 1107411 . + . ID=gene-PHA56_RS05305;Name=cysI;gbkey=Gene;gene=cysI;gene_biotype=protein_coding;locus_tag=PHA56_RS05305;old_locus_tag=PHA56_05305 NZ_CP116214.1 Protein Homology CDS 1105699 1107411 . + 0 ID=cds-WP_014226593.1;Parent=gene-PHA56_RS05305;Dbxref=Genbank:WP_014226593.1;Name=WP_014226593.1;Ontology_term=GO:0000103,GO:0004783;gbkey=CDS;gene=cysI;go_function=sulfite reductase (NADPH) activity|0004783||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001290736.1;locus_tag=PHA56_RS05305;product=assimilatory sulfite reductase (NADPH) hemoprotein subunit;protein_id=WP_014226593.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1107510 1108244 . + . ID=gene-PHA56_RS05310;Name=cysH;gbkey=Gene;gene=cysH;gene_biotype=protein_coding;locus_tag=PHA56_RS05310;old_locus_tag=PHA56_05310 NZ_CP116214.1 Protein Homology CDS 1107510 1108244 . + 0 ID=cds-WP_014226592.1;Parent=gene-PHA56_RS05310;Dbxref=Genbank:WP_014226592.1;Name=WP_014226592.1;Ontology_term=GO:0019379,GO:0004604;gbkey=CDS;gene=cysH;go_function=phosphoadenylyl-sulfate reductase (thioredoxin) activity|0004604||IEA;go_process=sulfate assimilation%2C phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin)|0019379||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461867.1;locus_tag=PHA56_RS05310;product=phosphoadenosine phosphosulfate reductase;protein_id=WP_014226592.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1108861 1109103 . + . ID=gene-PHA56_RS05315;Name=PHA56_RS05315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS05315;old_locus_tag=PHA56_05315 NZ_CP116214.1 GeneMarkS-2+ CDS 1108861 1109103 . + 0 ID=cds-WP_223226740.1;Parent=gene-PHA56_RS05315;Dbxref=Genbank:WP_223226740.1;Name=WP_223226740.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PHA56_RS05315;product=hypothetical protein;protein_id=WP_223226740.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1109328 1109702 . + . ID=gene-PHA56_RS05320;Name=PHA56_RS05320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS05320;old_locus_tag=PHA56_05320 NZ_CP116214.1 GeneMarkS-2+ CDS 1109328 1109702 . + 0 ID=cds-WP_128696480.1;Parent=gene-PHA56_RS05320;Dbxref=Genbank:WP_128696480.1;Name=WP_128696480.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PHA56_RS05320;product=hypothetical protein;protein_id=WP_128696480.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1109721 1110869 . + . ID=gene-PHA56_RS05325;Name=PHA56_RS05325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS05325;old_locus_tag=PHA56_05325 NZ_CP116214.1 Protein Homology CDS 1109721 1110869 . + 0 ID=cds-WP_119834346.1;Parent=gene-PHA56_RS05325;Dbxref=Genbank:WP_119834346.1;Name=WP_119834346.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015854871.1;locus_tag=PHA56_RS05325;product=cysteine desulfurase family protein;protein_id=WP_119834346.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1110866 1111783 . + . ID=gene-PHA56_RS05330;Name=PHA56_RS05330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS05330;old_locus_tag=PHA56_05330 NZ_CP116214.1 Protein Homology CDS 1110866 1111783 . + 0 ID=cds-WP_038424895.1;Parent=gene-PHA56_RS05330;Dbxref=Genbank:WP_038424895.1;Name=WP_038424895.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015854872.1;locus_tag=PHA56_RS05330;product=DMT family transporter;protein_id=WP_038424895.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1112117 1112638 . + . ID=gene-PHA56_RS05335;Name=PHA56_RS05335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS05335;old_locus_tag=PHA56_05335 NZ_CP116214.1 Protein Homology CDS 1112117 1112638 . + 0 ID=cds-WP_038424894.1;Parent=gene-PHA56_RS05335;Dbxref=Genbank:WP_038424894.1;Name=WP_038424894.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017145484.1;locus_tag=PHA56_RS05335;product=DUF3304 domain-containing protein;protein_id=WP_038424894.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1112737 1115220 . + . ID=gene-PHA56_RS05340;Name=PHA56_RS05340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS05340;old_locus_tag=PHA56_05340 NZ_CP116214.1 Protein Homology CDS 1112737 1115220 . + 0 ID=cds-WP_223239324.1;Parent=gene-PHA56_RS05340;Dbxref=Genbank:WP_223239324.1;Name=WP_223239324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004104986.1;locus_tag=PHA56_RS05340;product=DUF2235 domain-containing protein;protein_id=WP_223239324.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1115414 1116469 . - . ID=gene-PHA56_RS05345;Name=PHA56_RS05345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS05345;old_locus_tag=PHA56_05345 NZ_CP116214.1 Protein Homology CDS 1115414 1116469 . - 0 ID=cds-WP_025106436.1;Parent=gene-PHA56_RS05345;Dbxref=Genbank:WP_025106436.1;Name=WP_025106436.1;Ontology_term=GO:0008235;gbkey=CDS;go_function=metalloexopeptidase activity|0008235||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004142763.1;locus_tag=PHA56_RS05345;product=aminopeptidase;protein_id=WP_025106436.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1116716 1118122 . + . ID=gene-PHA56_RS05350;Name=cysG;gbkey=Gene;gene=cysG;gene_biotype=protein_coding;locus_tag=PHA56_RS05350;old_locus_tag=PHA56_05350 NZ_CP116214.1 Protein Homology CDS 1116716 1118122 . + 0 ID=cds-WP_162097155.1;Parent=gene-PHA56_RS05350;Dbxref=Genbank:WP_162097155.1;Name=WP_162097155.1;Ontology_term=GO:0019354,GO:0004851,GO:0043115,GO:0051266,GO:0051287;gbkey=CDS;gene=cysG;go_function=uroporphyrin-III C-methyltransferase activity|0004851||IEA,precorrin-2 dehydrogenase activity|0043115||IEA,sirohydrochlorin ferrochelatase activity|0051266||IEA,NAD binding|0051287||IEA;go_process=siroheme biosynthetic process|0019354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228490.1;locus_tag=PHA56_RS05350;product=siroheme synthase CysG;protein_id=WP_162097155.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1118132 1119040 . + . ID=gene-PHA56_RS05355;Name=cysD;gbkey=Gene;gene=cysD;gene_biotype=protein_coding;locus_tag=PHA56_RS05355;old_locus_tag=PHA56_05355 NZ_CP116214.1 Protein Homology CDS 1118132 1119040 . + 0 ID=cds-WP_004104981.1;Parent=gene-PHA56_RS05355;Dbxref=Genbank:WP_004104981.1;Name=WP_004104981.1;Ontology_term=GO:0019419,GO:0004781;gbkey=CDS;gene=cysD;go_function=sulfate adenylyltransferase (ATP) activity|0004781||IEA;go_process=sulfate reduction|0019419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130891.1;locus_tag=PHA56_RS05355;product=sulfate adenylyltransferase subunit CysD;protein_id=WP_004104981.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1119050 1120477 . + . ID=gene-PHA56_RS05360;Name=cysN;gbkey=Gene;gene=cysN;gene_biotype=protein_coding;locus_tag=PHA56_RS05360;old_locus_tag=PHA56_05360 NZ_CP116214.1 Protein Homology CDS 1119050 1120477 . + 0 ID=cds-WP_014226587.1;Parent=gene-PHA56_RS05360;Dbxref=Genbank:WP_014226587.1;Name=WP_014226587.1;Ontology_term=GO:0006790,GO:0003924,GO:0005525;gbkey=CDS;gene=cysN;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228488.1;locus_tag=PHA56_RS05360;product=sulfate adenylyltransferase subunit CysN;protein_id=WP_014226587.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1120477 1121082 . + . ID=gene-PHA56_RS05365;Name=cysC;gbkey=Gene;gene=cysC;gene_biotype=protein_coding;locus_tag=PHA56_RS05365;old_locus_tag=PHA56_05365 NZ_CP116214.1 Protein Homology CDS 1120477 1121082 . + 0 ID=cds-WP_004853621.1;Parent=gene-PHA56_RS05365;Dbxref=Genbank:WP_004853621.1;Name=WP_004853621.1;Ontology_term=GO:0006790,GO:0004020;gbkey=CDS;gene=cysC;go_function=adenylylsulfate kinase activity|0004020||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228487.1;locus_tag=PHA56_RS05365;product=adenylyl-sulfate kinase;protein_id=WP_004853621.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1121136 1121462 . + . ID=gene-PHA56_RS05370;Name=PHA56_RS05370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS05370;old_locus_tag=PHA56_05370 NZ_CP116214.1 Protein Homology CDS 1121136 1121462 . + 0 ID=cds-WP_004124286.1;Parent=gene-PHA56_RS05370;Dbxref=Genbank:WP_004124286.1;Name=WP_004124286.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228486.1;locus_tag=PHA56_RS05370;product=DUF3561 family protein;protein_id=WP_004124286.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1121603 1121920 . + . ID=gene-PHA56_RS05375;Name=ftsB;gbkey=Gene;gene=ftsB;gene_biotype=protein_coding;locus_tag=PHA56_RS05375;old_locus_tag=PHA56_05375 NZ_CP116214.1 Protein Homology CDS 1121603 1121920 . + 0 ID=cds-WP_004104977.1;Parent=gene-PHA56_RS05375;Dbxref=Genbank:WP_004104977.1;Name=WP_004104977.1;gbkey=CDS;gene=ftsB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228485.1;locus_tag=PHA56_RS05375;product=cell division protein FtsB;protein_id=WP_004104977.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1121940 1122650 . + . ID=gene-PHA56_RS05380;Name=ispD;gbkey=Gene;gene=ispD;gene_biotype=protein_coding;locus_tag=PHA56_RS05380;old_locus_tag=PHA56_05380 NZ_CP116214.1 Protein Homology CDS 1121940 1122650 . + 0 ID=cds-WP_004853617.1;Parent=gene-PHA56_RS05380;Dbxref=Genbank:WP_004853617.1;Name=WP_004853617.1;Ontology_term=GO:0019288,GO:0050518;gbkey=CDS;gene=ispD;go_function=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity|0050518||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228484.1;locus_tag=PHA56_RS05380;product=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;protein_id=WP_004853617.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1122650 1123129 . + . ID=gene-PHA56_RS05385;Name=ispF;gbkey=Gene;gene=ispF;gene_biotype=protein_coding;locus_tag=PHA56_RS05385;old_locus_tag=PHA56_05385 NZ_CP116214.1 Protein Homology CDS 1122650 1123129 . + 0 ID=cds-WP_004853615.1;Parent=gene-PHA56_RS05385;Dbxref=Genbank:WP_004853615.1;Name=WP_004853615.1;Ontology_term=GO:0019288,GO:0008685;gbkey=CDS;gene=ispF;go_function=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase activity|0008685||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311627.1;locus_tag=PHA56_RS05385;product=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase;protein_id=WP_004853615.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1123126 1124175 . + . ID=gene-PHA56_RS05390;Name=truD;gbkey=Gene;gene=truD;gene_biotype=protein_coding;locus_tag=PHA56_RS05390;old_locus_tag=PHA56_05390 NZ_CP116214.1 Protein Homology CDS 1123126 1124175 . + 0 ID=cds-WP_014226586.1;Parent=gene-PHA56_RS05390;Dbxref=Genbank:WP_014226586.1;Name=WP_014226586.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=truD;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228482.1;locus_tag=PHA56_RS05390;product=tRNA pseudouridine(13) synthase TruD;protein_id=WP_014226586.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1124156 1124917 . + . ID=gene-PHA56_RS05395;Name=surE;gbkey=Gene;gene=surE;gene_biotype=protein_coding;locus_tag=PHA56_RS05395;old_locus_tag=PHA56_05395 NZ_CP116214.1 Protein Homology CDS 1124156 1124917 . + 0 ID=cds-WP_004124266.1;Parent=gene-PHA56_RS05395;Dbxref=Genbank:WP_004124266.1;Name=WP_004124266.1;Ontology_term=GO:0008252;gbkey=CDS;gene=surE;go_function=nucleotidase activity|0008252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228481.1;locus_tag=PHA56_RS05395;product=5'/3'-nucleotidase SurE;protein_id=WP_004124266.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1124911 1125537 . + . ID=gene-PHA56_RS05400;Name=PHA56_RS05400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS05400;old_locus_tag=PHA56_05400 NZ_CP116214.1 Protein Homology CDS 1124911 1125537 . + 0 ID=cds-WP_009651549.1;Parent=gene-PHA56_RS05400;Dbxref=Genbank:WP_009651549.1;Name=WP_009651549.1;Ontology_term=GO:0036211,GO:0004719;gbkey=CDS;go_function=protein-L-isoaspartate (D-aspartate) O-methyltransferase activity|0004719||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130872.1;locus_tag=PHA56_RS05400;product=protein-L-isoaspartate(D-aspartate) O-methyltransferase;protein_id=WP_009651549.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1125720 1126778 . + . ID=gene-PHA56_RS05405;Name=nlpD;gbkey=Gene;gene=nlpD;gene_biotype=protein_coding;locus_tag=PHA56_RS05405;old_locus_tag=PHA56_05405 NZ_CP116214.1 Protein Homology CDS 1125720 1126778 . + 0 ID=cds-WP_223226746.1;Parent=gene-PHA56_RS05405;Dbxref=Genbank:WP_223226746.1;Name=WP_223226746.1;gbkey=CDS;gene=nlpD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228479.1;locus_tag=PHA56_RS05405;product=murein hydrolase activator NlpD;protein_id=WP_223226746.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1126938 1127930 . + . ID=gene-PHA56_RS05410;Name=rpoS;gbkey=Gene;gene=rpoS;gene_biotype=protein_coding;locus_tag=PHA56_RS05410;old_locus_tag=PHA56_05410 NZ_CP116214.1 Protein Homology CDS 1126938 1127930 . + 0 ID=cds-WP_004104962.1;Parent=gene-PHA56_RS05410;Dbxref=Genbank:WP_004104962.1;Name=WP_004104962.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000081498.1;locus_tag=PHA56_RS05410;product=RNA polymerase sigma factor RpoS;protein_id=WP_004104962.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1127996 1128373 . - . ID=gene-PHA56_RS05415;Name=PHA56_RS05415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS05415;old_locus_tag=PHA56_05415 NZ_CP116214.1 Protein Homology CDS 1127996 1128373 . - 0 ID=cds-WP_014839361.1;Parent=gene-PHA56_RS05415;Dbxref=Genbank:WP_014839361.1;Name=WP_014839361.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014839361.1;locus_tag=PHA56_RS05415;product=hypothetical protein;protein_id=WP_014839361.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1128370 1129584 . - . ID=gene-PHA56_RS05420;Name=PHA56_RS05420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS05420;old_locus_tag=PHA56_05420 NZ_CP116214.1 Protein Homology CDS 1128370 1129584 . - 0 ID=cds-WP_038424892.1;Parent=gene-PHA56_RS05420;Dbxref=Genbank:WP_038424892.1;Name=WP_038424892.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226583.1;locus_tag=PHA56_RS05420;product=MFS transporter;protein_id=WP_038424892.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1129692 1130579 . + . ID=gene-PHA56_RS05425;Name=PHA56_RS05425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS05425;old_locus_tag=PHA56_05425 NZ_CP116214.1 Protein Homology CDS 1129692 1130579 . + 0 ID=cds-WP_032694663.1;Parent=gene-PHA56_RS05425;Dbxref=Genbank:WP_032694663.1;Name=WP_032694663.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004114873.1;locus_tag=PHA56_RS05425;product=LysR family transcriptional regulator;protein_id=WP_032694663.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1130576 1130992 . - . ID=gene-PHA56_RS05430;Name=PHA56_RS05430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS05430;old_locus_tag=PHA56_05430 NZ_CP116214.1 Protein Homology CDS 1130576 1130992 . - 0 ID=cds-WP_004853601.1;Parent=gene-PHA56_RS05430;Dbxref=Genbank:WP_004853601.1;Name=WP_004853601.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004853601.1;locus_tag=PHA56_RS05430;product=MarR family transcriptional regulator;protein_id=WP_004853601.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1131162 1131755 . + . ID=gene-PHA56_RS05435;Name=PHA56_RS05435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS05435;old_locus_tag=PHA56_05435 NZ_CP116214.1 Protein Homology CDS 1131162 1131755 . + 0 ID=cds-WP_032694662.1;Parent=gene-PHA56_RS05435;Dbxref=Genbank:WP_032694662.1;Name=WP_032694662.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228473.1;locus_tag=PHA56_RS05435;product=non-oxidative hydroxyarylic acid decarboxylases subunit B;protein_id=WP_032694662.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1131755 1133182 . + . ID=gene-PHA56_RS05440;Name=PHA56_RS05440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS05440;old_locus_tag=PHA56_05440 NZ_CP116214.1 Protein Homology CDS 1131755 1133182 . + 0 ID=cds-WP_004853598.1;Parent=gene-PHA56_RS05440;Dbxref=Genbank:WP_004853598.1;Name=WP_004853598.1;Ontology_term=GO:0016831;gbkey=CDS;go_function=carboxy-lyase activity|0016831||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228472.1;locus_tag=PHA56_RS05440;product=non-oxidative hydroxyarylic acid decarboxylases subunit C;protein_id=WP_004853598.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1133193 1133429 . + . ID=gene-PHA56_RS05445;Name=PHA56_RS05445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS05445;old_locus_tag=PHA56_05445 NZ_CP116214.1 Protein Homology CDS 1133193 1133429 . + 0 ID=cds-WP_004853596.1;Parent=gene-PHA56_RS05445;Dbxref=Genbank:WP_004853596.1;Name=WP_004853596.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311618.1;locus_tag=PHA56_RS05445;product=non-oxidative hydroxyarylic acid decarboxylases subunit D;protein_id=WP_004853596.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1133768 1133920 . + . ID=gene-PHA56_RS05450;Name=PHA56_RS05450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS05450;old_locus_tag=PHA56_05450 NZ_CP116214.1 Protein Homology CDS 1133768 1133920 . + 0 ID=cds-WP_009651623.1;Parent=gene-PHA56_RS05450;Dbxref=Genbank:WP_009651623.1;Name=WP_009651623.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228470.1;locus_tag=PHA56_RS05450;product=Hok/Gef family protein;protein_id=WP_009651623.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1134040 1136601 . - . ID=gene-PHA56_RS05455;Name=mutS;gbkey=Gene;gene=mutS;gene_biotype=protein_coding;locus_tag=PHA56_RS05455;old_locus_tag=PHA56_05455 NZ_CP116214.1 Protein Homology CDS 1134040 1136601 . - 0 ID=cds-WP_038424891.1;Parent=gene-PHA56_RS05455;Dbxref=Genbank:WP_038424891.1;Name=WP_038424891.1;Ontology_term=GO:0006298,GO:0005524;gbkey=CDS;gene=mutS;go_function=ATP binding|0005524||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228469.1;locus_tag=PHA56_RS05455;product=DNA mismatch repair protein MutS;protein_id=WP_038424891.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1137318 1137857 . + . ID=gene-PHA56_RS05460;Name=PHA56_RS05460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS05460;old_locus_tag=PHA56_05460 NZ_CP116214.1 Protein Homology CDS 1137318 1137857 . + 0 ID=cds-WP_004124241.1;Parent=gene-PHA56_RS05460;Dbxref=Genbank:WP_004124241.1;Name=WP_004124241.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004124241.1;locus_tag=PHA56_RS05460;product=fimbrial protein;protein_id=WP_004124241.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1137937 1138491 . + . ID=gene-PHA56_RS05465;Name=PHA56_RS05465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS05465;old_locus_tag=PHA56_05465 NZ_CP116214.1 Protein Homology CDS 1137937 1138491 . + 0 ID=cds-WP_014226579.1;Parent=gene-PHA56_RS05465;Dbxref=Genbank:WP_014226579.1;Name=WP_014226579.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004853591.1;locus_tag=PHA56_RS05465;product=fimbrial protein;protein_id=WP_014226579.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1138567 1141035 . + . ID=gene-PHA56_RS05470;Name=PHA56_RS05470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS05470;old_locus_tag=PHA56_05470 NZ_CP116214.1 Protein Homology CDS 1138567 1141035 . + 0 ID=cds-WP_014839357.1;Parent=gene-PHA56_RS05470;Dbxref=Genbank:WP_014839357.1;Name=WP_014839357.1;Ontology_term=GO:0009297,GO:0015473,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004104940.1;locus_tag=PHA56_RS05470;product=fimbria/pilus outer membrane usher protein;protein_id=WP_014839357.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1141061 1141804 . + . ID=gene-PHA56_RS05475;Name=PHA56_RS05475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS05475;old_locus_tag=PHA56_05475 NZ_CP116214.1 Protein Homology CDS 1141061 1141804 . + 0 ID=cds-WP_032720410.1;Parent=gene-PHA56_RS05475;Dbxref=Genbank:WP_032720410.1;Name=WP_032720410.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004124233.1;locus_tag=PHA56_RS05475;product=molecular chaperone;protein_id=WP_032720410.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1141820 1142452 . + . ID=gene-PHA56_RS05480;Name=PHA56_RS05480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS05480;old_locus_tag=PHA56_05480 NZ_CP116214.1 Protein Homology CDS 1141820 1142452 . + 0 ID=cds-WP_032694652.1;Parent=gene-PHA56_RS05480;Dbxref=Genbank:WP_032694652.1;Name=WP_032694652.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014839355.1;locus_tag=PHA56_RS05480;product=fimbrial protein;protein_id=WP_032694652.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1142452 1143504 . + . ID=gene-PHA56_RS05485;Name=PHA56_RS05485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS05485;old_locus_tag=PHA56_05485 NZ_CP116214.1 Protein Homology CDS 1142452 1143504 . + 0 ID=cds-WP_014226576.1;Parent=gene-PHA56_RS05485;Dbxref=Genbank:WP_014226576.1;Name=WP_014226576.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017145490.1;locus_tag=PHA56_RS05485;product=fimbrial protein;protein_id=WP_014226576.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1143514 1144062 . + . ID=gene-PHA56_RS05490;Name=PHA56_RS05490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS05490;old_locus_tag=PHA56_05490 NZ_CP116214.1 Protein Homology CDS 1143514 1144062 . + 0 ID=cds-WP_014226575.1;Parent=gene-PHA56_RS05490;Dbxref=Genbank:WP_014226575.1;Name=WP_014226575.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226575.1;locus_tag=PHA56_RS05490;product=fimbrial protein;protein_id=WP_014226575.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1144085 1144756 . + . ID=gene-PHA56_RS05495;Name=PHA56_RS05495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS05495;old_locus_tag=PHA56_05495 NZ_CP116214.1 Protein Homology CDS 1144085 1144756 . + 0 ID=cds-WP_014226574.1;Parent=gene-PHA56_RS05495;Dbxref=Genbank:WP_014226574.1;Name=WP_014226574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004853585.1;locus_tag=PHA56_RS05495;product=transcriptional regulator;protein_id=WP_014226574.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1144861 1145067 . + . ID=gene-PHA56_RS05500;Name=PHA56_RS05500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS05500;old_locus_tag=PHA56_05500 NZ_CP116214.1 Protein Homology CDS 1144861 1145067 . + 0 ID=cds-WP_014226573.1;Parent=gene-PHA56_RS05500;Dbxref=Genbank:WP_014226573.1;Name=WP_014226573.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004104922.1;locus_tag=PHA56_RS05500;product=DUF4762 family protein;protein_id=WP_014226573.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1145138 1145806 . + . ID=gene-PHA56_RS05505;Name=PHA56_RS05505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS05505;old_locus_tag=PHA56_05505 NZ_CP116214.1 Protein Homology CDS 1145138 1145806 . + 0 ID=cds-WP_014226572.1;Parent=gene-PHA56_RS05505;Dbxref=Genbank:WP_014226572.1;Name=WP_014226572.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226572.1;locus_tag=PHA56_RS05505;product=DsbA family protein;protein_id=WP_014226572.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1145809 1146759 . + . ID=gene-PHA56_RS05510;Name=PHA56_RS05510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS05510;old_locus_tag=PHA56_05510 NZ_CP116214.1 Protein Homology CDS 1145809 1146759 . + 0 ID=cds-WP_014226571.1;Parent=gene-PHA56_RS05510;Dbxref=Genbank:WP_014226571.1;Name=WP_014226571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004104910.1;locus_tag=PHA56_RS05510;product=ABC transporter;protein_id=WP_014226571.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1146769 1148880 . + . ID=gene-PHA56_RS05515;Name=PHA56_RS05515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS05515;old_locus_tag=PHA56_05515 NZ_CP116214.1 Protein Homology CDS 1146769 1148880 . + 0 ID=cds-WP_014226570.1;Parent=gene-PHA56_RS05515;Dbxref=Genbank:WP_014226570.1;Name=WP_014226570.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004853581.1;locus_tag=PHA56_RS05515;product=ATP-binding cassette domain-containing protein;protein_id=WP_014226570.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1148877 1150037 . + . ID=gene-PHA56_RS05520;Name=PHA56_RS05520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS05520;old_locus_tag=PHA56_05520 NZ_CP116214.1 Protein Homology CDS 1148877 1150037 . + 0 ID=cds-WP_014226569.1;Parent=gene-PHA56_RS05520;Dbxref=Genbank:WP_014226569.1;Name=WP_014226569.1;Ontology_term=GO:0006810,GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017145493.1;locus_tag=PHA56_RS05520;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_014226569.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1150037 1151980 . + . ID=gene-PHA56_RS05525;Name=PHA56_RS05525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS05525;old_locus_tag=PHA56_05525 NZ_CP116214.1 Protein Homology CDS 1150037 1151980 . + 0 ID=cds-WP_014226568.1;Parent=gene-PHA56_RS05525;Dbxref=Genbank:WP_014226568.1;Name=WP_014226568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009651541.1;locus_tag=PHA56_RS05525;product=ABC transporter permease;protein_id=WP_014226568.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1151977 1153374 . + . ID=gene-PHA56_RS05530;Name=PHA56_RS05530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS05530;old_locus_tag=PHA56_05530 NZ_CP116214.1 Protein Homology CDS 1151977 1153374 . + 0 ID=cds-WP_119834347.1;Parent=gene-PHA56_RS05530;Dbxref=Genbank:WP_119834347.1;Name=WP_119834347.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004124201.1;locus_tag=PHA56_RS05530;product=TolC family protein;protein_id=WP_119834347.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1153361 1154614 . + . ID=gene-PHA56_RS05535;Name=PHA56_RS05535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS05535;old_locus_tag=PHA56_05535 NZ_CP116214.1 Protein Homology CDS 1153361 1154614 . + 0 ID=cds-WP_014226566.1;Parent=gene-PHA56_RS05535;Dbxref=Genbank:WP_014226566.1;Name=WP_014226566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004853573.1;locus_tag=PHA56_RS05535;product=beta-ketoacyl-[acyl-carrier-protein] synthase family protein;protein_id=WP_014226566.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1154611 1155405 . + . ID=gene-PHA56_RS05540;Name=PHA56_RS05540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS05540;old_locus_tag=PHA56_05540 NZ_CP116214.1 Protein Homology CDS 1154611 1155405 . + 0 ID=cds-WP_014226565.1;Parent=gene-PHA56_RS05540;Dbxref=Genbank:WP_014226565.1;Name=WP_014226565.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004853572.1;locus_tag=PHA56_RS05540;product=MaoC/PaaZ C-terminal domain-containing protein;protein_id=WP_014226565.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1155422 1155673 . + . ID=gene-PHA56_RS05545;Name=PHA56_RS05545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS05545;old_locus_tag=PHA56_05545 NZ_CP116214.1 Protein Homology CDS 1155422 1155673 . + 0 ID=cds-WP_004853570.1;Parent=gene-PHA56_RS05545;Dbxref=Genbank:WP_004853570.1;Name=WP_004853570.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004137379.1;locus_tag=PHA56_RS05545;product=acyl carrier protein;protein_id=WP_004853570.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1155675 1156406 . + . ID=gene-PHA56_RS05550;Name=PHA56_RS05550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS05550;old_locus_tag=PHA56_05550 NZ_CP116214.1 Protein Homology CDS 1155675 1156406 . + 0 ID=cds-WP_014839345.1;Parent=gene-PHA56_RS05550;Dbxref=Genbank:WP_014839345.1;Name=WP_014839345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017145497.1;locus_tag=PHA56_RS05550;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_014839345.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1156432 1157628 . - . ID=gene-PHA56_RS05555;Name=PHA56_RS05555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS05555;old_locus_tag=PHA56_05555 NZ_CP116214.1 Protein Homology CDS 1156432 1157628 . - 0 ID=cds-WP_223226742.1;Parent=gene-PHA56_RS05555;Dbxref=Genbank:WP_223226742.1;Name=WP_223226742.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226563.1;locus_tag=PHA56_RS05555;product=HD domain-containing protein;protein_id=WP_223226742.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1157667 1158152 . - . ID=gene-PHA56_RS05560;Name=PHA56_RS05560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS05560;old_locus_tag=PHA56_05560 NZ_CP116214.1 Protein Homology CDS 1157667 1158152 . - 0 ID=cds-WP_032694643.1;Parent=gene-PHA56_RS05560;Dbxref=Genbank:WP_032694643.1;Name=WP_032694643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014839344.1;locus_tag=PHA56_RS05560;product=hypothetical protein;protein_id=WP_032694643.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1158145 1158885 . - . ID=gene-PHA56_RS05565;Name=PHA56_RS05565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS05565;old_locus_tag=PHA56_05565 NZ_CP116214.1 Protein Homology CDS 1158145 1158885 . - 0 ID=cds-WP_014226561.1;Parent=gene-PHA56_RS05565;Dbxref=Genbank:WP_014226561.1;Name=WP_014226561.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009651614.1;locus_tag=PHA56_RS05565;product=winged helix-turn-helix domain-containing protein;protein_id=WP_014226561.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1159057 1159368 . + . ID=gene-PHA56_RS05570;Name=PHA56_RS05570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS05570;old_locus_tag=PHA56_05570 NZ_CP116214.1 Protein Homology CDS 1159057 1159368 . + 0 ID=cds-WP_014226560.1;Parent=gene-PHA56_RS05570;Dbxref=Genbank:WP_014226560.1;Name=WP_014226560.1;Ontology_term=GO:0006355,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004104889.1;locus_tag=PHA56_RS05570;product=FaeA/PapI family transcriptional regulator;protein_id=WP_014226560.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1159660 1159896 . - . ID=gene-PHA56_RS05575;Name=PHA56_RS05575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS05575;old_locus_tag=PHA56_05575 NZ_CP116214.1 GeneMarkS-2+ CDS 1159660 1159896 . - 0 ID=cds-WP_125908604.1;Parent=gene-PHA56_RS05575;Dbxref=Genbank:WP_125908604.1;Name=WP_125908604.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PHA56_RS05575;product=hypothetical protein;protein_id=WP_125908604.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1160267 1161418 . + . ID=gene-PHA56_RS05580;Name=fucO;gbkey=Gene;gene=fucO;gene_biotype=protein_coding;locus_tag=PHA56_RS05580;old_locus_tag=PHA56_05580 NZ_CP116214.1 Protein Homology CDS 1160267 1161418 . + 0 ID=cds-WP_014226559.1;Parent=gene-PHA56_RS05580;Dbxref=Genbank:WP_014226559.1;Name=WP_014226559.1;Ontology_term=GO:0016491;gbkey=CDS;gene=fucO;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004104888.1;locus_tag=PHA56_RS05580;product=lactaldehyde reductase;protein_id=WP_014226559.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1161492 1162208 . - . ID=gene-PHA56_RS05585;Name=PHA56_RS05585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS05585;old_locus_tag=PHA56_05585 NZ_CP116214.1 Protein Homology CDS 1161492 1162208 . - 0 ID=cds-WP_014226558.1;Parent=gene-PHA56_RS05585;Dbxref=Genbank:WP_014226558.1;Name=WP_014226558.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226558.1;locus_tag=PHA56_RS05585;product=FadR/GntR family transcriptional regulator;protein_id=WP_014226558.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1162297 1163346 . - . ID=gene-PHA56_RS05590;Name=idnD;gbkey=Gene;gene=idnD;gene_biotype=protein_coding;locus_tag=PHA56_RS05590;old_locus_tag=PHA56_05590 NZ_CP116214.1 Protein Homology CDS 1162297 1163346 . - 0 ID=cds-WP_042945946.1;Parent=gene-PHA56_RS05590;Dbxref=Genbank:WP_042945946.1;Name=WP_042945946.1;gbkey=CDS;gene=idnD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226557.1;locus_tag=PHA56_RS05590;product=L-idonate 5-dehydrogenase;protein_id=WP_042945946.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1163354 1164718 . - . ID=gene-PHA56_RS05595;Name=PHA56_RS05595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS05595;old_locus_tag=PHA56_05595 NZ_CP116214.1 Protein Homology CDS 1163354 1164718 . - 0 ID=cds-WP_041165253.1;Parent=gene-PHA56_RS05595;Dbxref=Genbank:WP_041165253.1;Name=WP_041165253.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000648132.1;locus_tag=PHA56_RS05595;product=MFS transporter;protein_id=WP_041165253.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1164811 1165578 . - . ID=gene-PHA56_RS05600;Name=PHA56_RS05600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS05600;old_locus_tag=PHA56_05600 NZ_CP116214.1 Protein Homology CDS 1164811 1165578 . - 0 ID=cds-WP_119834348.1;Parent=gene-PHA56_RS05600;Dbxref=Genbank:WP_119834348.1;Name=WP_119834348.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006894239.1;locus_tag=PHA56_RS05600;product=SDR family oxidoreductase;protein_id=WP_119834348.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1165916 1167169 . + . ID=gene-PHA56_RS05605;Name=PHA56_RS05605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS05605;old_locus_tag=PHA56_05605 NZ_CP116214.1 Protein Homology CDS 1165916 1167169 . + 0 ID=cds-WP_014226554.1;Parent=gene-PHA56_RS05605;Dbxref=Genbank:WP_014226554.1;Name=WP_014226554.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000067287.1;locus_tag=PHA56_RS05605;product=enolase C-terminal domain-like protein;protein_id=WP_014226554.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1167361 1168140 . - . ID=gene-PHA56_RS05610;Name=PHA56_RS05610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS05610;old_locus_tag=PHA56_05610 NZ_CP116214.1 Protein Homology CDS 1167361 1168140 . - 0 ID=cds-WP_049083788.1;Parent=gene-PHA56_RS05610;Dbxref=Genbank:WP_049083788.1;Name=WP_049083788.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228466.1;locus_tag=PHA56_RS05610;product=heme ABC transporter ATP-binding protein;protein_id=WP_049083788.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1168133 1169128 . - . ID=gene-PHA56_RS05615;Name=PHA56_RS05615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS05615;old_locus_tag=PHA56_05615 NZ_CP116214.1 Protein Homology CDS 1168133 1169128 . - 0 ID=cds-WP_119834349.1;Parent=gene-PHA56_RS05615;Dbxref=Genbank:WP_119834349.1;Name=WP_119834349.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009485526.1;locus_tag=PHA56_RS05615;product=iron ABC transporter permease;protein_id=WP_119834349.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1169128 1169946 . - . ID=gene-PHA56_RS05620;Name=PHA56_RS05620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS05620;old_locus_tag=PHA56_05620 NZ_CP116214.1 Protein Homology CDS 1169128 1169946 . - 0 ID=cds-WP_119834350.1;Parent=gene-PHA56_RS05620;Dbxref=Genbank:WP_119834350.1;Name=WP_119834350.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228464.1;locus_tag=PHA56_RS05620;product=hemin ABC transporter substrate-binding protein;protein_id=WP_119834350.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1169943 1170983 . - . ID=gene-PHA56_RS05625;Name=PHA56_RS05625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS05625;old_locus_tag=PHA56_05625 NZ_CP116214.1 Protein Homology CDS 1169943 1170983 . - 0 ID=cds-WP_014226550.1;Parent=gene-PHA56_RS05625;Dbxref=Genbank:WP_014226550.1;Name=WP_014226550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004104883.1;locus_tag=PHA56_RS05625;product=hemin-degrading factor;protein_id=WP_014226550.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1171055 1173424 . - . ID=gene-PHA56_RS05630;Name=PHA56_RS05630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS05630;old_locus_tag=PHA56_05630 NZ_CP116214.1 Protein Homology CDS 1171055 1173424 . - 0 ID=cds-WP_032694637.1;Parent=gene-PHA56_RS05630;Dbxref=Genbank:WP_032694637.1;Name=WP_032694637.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228462.1;locus_tag=PHA56_RS05630;product=TonB-dependent receptor;protein_id=WP_032694637.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1173640 1173924 . + . ID=gene-PHA56_RS05635;Name=PHA56_RS05635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS05635;old_locus_tag=PHA56_05635 NZ_CP116214.1 Protein Homology CDS 1173640 1173924 . + 0 ID=cds-WP_004853555.1;Parent=gene-PHA56_RS05635;Dbxref=Genbank:WP_004853555.1;Name=WP_004853555.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004124173.1;locus_tag=PHA56_RS05635;product=SelT/SelW/SelH family protein;protein_id=WP_004853555.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1174001 1174351 . + . ID=gene-PHA56_RS05640;Name=PHA56_RS05640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS05640;old_locus_tag=PHA56_05640 NZ_CP116214.1 Protein Homology CDS 1174001 1174351 . + 0 ID=cds-WP_014226548.1;Parent=gene-PHA56_RS05640;Dbxref=Genbank:WP_014226548.1;Name=WP_014226548.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226548.1;locus_tag=PHA56_RS05640;product=nitrous oxide-stimulated promoter family protein;protein_id=WP_014226548.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1174687 1175541 . - . ID=gene-PHA56_RS05645;Name=sitD;gbkey=Gene;gene=sitD;gene_biotype=protein_coding;locus_tag=PHA56_RS05645;old_locus_tag=PHA56_05645 NZ_CP116214.1 Protein Homology CDS 1174687 1175541 . - 0 ID=cds-WP_014226547.1;Parent=gene-PHA56_RS05645;Dbxref=Genbank:WP_014226547.1;Name=WP_014226547.1;gbkey=CDS;gene=sitD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009651625.1;locus_tag=PHA56_RS05645;product=iron/manganese ABC transporter permease subunit SitD;protein_id=WP_014226547.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1175535 1176383 . - . ID=gene-PHA56_RS05650;Name=sitC;gbkey=Gene;gene=sitC;gene_biotype=protein_coding;locus_tag=PHA56_RS05650;old_locus_tag=PHA56_05650 NZ_CP116214.1 Protein Homology CDS 1175535 1176383 . - 0 ID=cds-WP_014226546.1;Parent=gene-PHA56_RS05650;Dbxref=Genbank:WP_014226546.1;Name=WP_014226546.1;gbkey=CDS;gene=sitC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228455.1;locus_tag=PHA56_RS05650;product=iron/manganese ABC transporter permease subunit SitC;protein_id=WP_014226546.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1176380 1177201 . - . ID=gene-PHA56_RS05655;Name=PHA56_RS05655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS05655;old_locus_tag=PHA56_05655 NZ_CP116214.1 Protein Homology CDS 1176380 1177201 . - 0 ID=cds-WP_014226545.1;Parent=gene-PHA56_RS05655;Dbxref=Genbank:WP_014226545.1;Name=WP_014226545.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004124160.1;locus_tag=PHA56_RS05655;product=manganese/iron ABC transporter ATP-binding protein;protein_id=WP_014226545.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1177198 1178115 . - . ID=gene-PHA56_RS05660;Name=PHA56_RS05660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS05660;old_locus_tag=PHA56_05660 NZ_CP116214.1 Protein Homology CDS 1177198 1178115 . - 0 ID=cds-WP_014226544.1;Parent=gene-PHA56_RS05660;Dbxref=Genbank:WP_014226544.1;Name=WP_014226544.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226544.1;locus_tag=PHA56_RS05660;product=metal ABC transporter substrate-binding protein;protein_id=WP_014226544.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1178294 1179256 . - . ID=gene-PHA56_RS05665;Name=PHA56_RS05665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS05665;old_locus_tag=PHA56_05665 NZ_CP116214.1 Protein Homology CDS 1178294 1179256 . - 0 ID=cds-WP_119834351.1;Parent=gene-PHA56_RS05665;Dbxref=Genbank:WP_119834351.1;Name=WP_119834351.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002915031.1;locus_tag=PHA56_RS05665;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_119834351.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1179313 1180227 . - . ID=gene-PHA56_RS05670;Name=PHA56_RS05670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS05670;old_locus_tag=PHA56_05670 NZ_CP116214.1 Protein Homology CDS 1179313 1180227 . - 0 ID=cds-WP_119834352.1;Parent=gene-PHA56_RS05670;Dbxref=Genbank:WP_119834352.1;Name=WP_119834352.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016809476.1;locus_tag=PHA56_RS05670;product=ROK family protein;protein_id=WP_119834352.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1180416 1180730 . - . ID=gene-PHA56_RS05675;Name=PHA56_RS05675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS05675;old_locus_tag=PHA56_05675 NZ_CP116214.1 Protein Homology CDS 1180416 1180730 . - 0 ID=cds-WP_119834353.1;Parent=gene-PHA56_RS05675;Dbxref=Genbank:WP_119834353.1;Name=WP_119834353.1;Ontology_term=GO:0009401;gbkey=CDS;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228450.1;locus_tag=PHA56_RS05675;product=PTS lactose/cellobiose transporter subunit IIA;protein_id=WP_119834353.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1180754 1182076 . - . ID=gene-PHA56_RS05680;Name=PHA56_RS05680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS05680;old_locus_tag=PHA56_05680 NZ_CP116214.1 Protein Homology CDS 1180754 1182076 . - 0 ID=cds-WP_004134311.1;Parent=gene-PHA56_RS05680;Dbxref=Genbank:WP_004134311.1;Name=WP_004134311.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228449.1;locus_tag=PHA56_RS05680;product=PTS cellobiose transporter subunit IIC;protein_id=WP_004134311.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1182086 1182400 . - . ID=gene-PHA56_RS05685;Name=PHA56_RS05685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS05685;old_locus_tag=PHA56_05685 NZ_CP116214.1 Protein Homology CDS 1182086 1182400 . - 0 ID=cds-WP_004104871.1;Parent=gene-PHA56_RS05685;Dbxref=Genbank:WP_004104871.1;Name=WP_004104871.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228448.1;locus_tag=PHA56_RS05685;product=PTS sugar transporter subunit IIB;protein_id=WP_004104871.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1182575 1183846 . + . ID=gene-PHA56_RS05690;Name=PHA56_RS05690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS05690;old_locus_tag=PHA56_05690 NZ_CP116214.1 Protein Homology CDS 1182575 1183846 . + 0 ID=cds-WP_025106460.1;Parent=gene-PHA56_RS05690;Dbxref=Genbank:WP_025106460.1;Name=WP_025106460.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004900117.1;locus_tag=PHA56_RS05690;product=PTS transporter subunit EIIC;protein_id=WP_025106460.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1184070 1185407 . + . ID=gene-PHA56_RS05695;Name=PHA56_RS05695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS05695;old_locus_tag=PHA56_05695 NZ_CP116214.1 Protein Homology CDS 1184070 1185407 . + 0 ID=cds-WP_004853540.1;Parent=gene-PHA56_RS05695;Dbxref=Genbank:WP_004853540.1;Name=WP_004853540.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228445.1;locus_tag=PHA56_RS05695;product=carbohydrate porin;protein_id=WP_004853540.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1185423 1187615 . + . ID=gene-PHA56_RS05700;Name=PHA56_RS05700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS05700;old_locus_tag=PHA56_05700 NZ_CP116214.1 Protein Homology CDS 1185423 1187615 . + 0 ID=cds-WP_162933634.1;Parent=gene-PHA56_RS05700;Dbxref=Genbank:WP_162933634.1;Name=WP_162933634.1;Ontology_term=GO:0030246;gbkey=CDS;go_function=carbohydrate binding|0030246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228444.1;locus_tag=PHA56_RS05700;product=CBM35 domain-containing protein;protein_id=WP_162933634.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1187670 1189070 . + . ID=gene-PHA56_RS05705;Name=PHA56_RS05705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS05705;old_locus_tag=PHA56_05705 NZ_CP116214.1 Protein Homology CDS 1187670 1189070 . + 0 ID=cds-WP_025106462.1;Parent=gene-PHA56_RS05705;Dbxref=Genbank:WP_025106462.1;Name=WP_025106462.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228443.1;locus_tag=PHA56_RS05705;product=glycoside hydrolase family 1 protein;protein_id=WP_025106462.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1189259 1190206 . - . ID=gene-PHA56_RS05710;Name=PHA56_RS05710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS05710;old_locus_tag=PHA56_05710 NZ_CP116214.1 Protein Homology CDS 1189259 1190206 . - 0 ID=cds-WP_119834357.1;Parent=gene-PHA56_RS05710;Dbxref=Genbank:WP_119834357.1;Name=WP_119834357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014839324.1;locus_tag=PHA56_RS05710;product=alpha/beta hydrolase;protein_id=WP_119834357.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1190324 1192396 . - . ID=gene-PHA56_RS05715;Name=flhA;gbkey=Gene;gene=flhA;gene_biotype=protein_coding;locus_tag=PHA56_RS05715;old_locus_tag=PHA56_05715 NZ_CP116214.1 Protein Homology CDS 1190324 1192396 . - 0 ID=cds-WP_119834358.1;Parent=gene-PHA56_RS05715;Dbxref=Genbank:WP_119834358.1;Name=WP_119834358.1;Ontology_term=GO:0006355,GO:0005515,GO:0005524,GO:0008134,GO:0043565;gbkey=CDS;gene=flhA;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA,transcription factor binding|0008134||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004104864.1;locus_tag=PHA56_RS05715;product=formate hydrogenlyase transcriptional activator FlhA;protein_id=WP_119834358.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1192628 1193638 . - . ID=gene-PHA56_RS05720;Name=hypE;gbkey=Gene;gene=hypE;gene_biotype=protein_coding;locus_tag=PHA56_RS05720;old_locus_tag=PHA56_05720 NZ_CP116214.1 Protein Homology CDS 1192628 1193638 . - 0 ID=cds-WP_119834359.1;Parent=gene-PHA56_RS05720;Dbxref=Genbank:WP_119834359.1;Name=WP_119834359.1;gbkey=CDS;gene=hypE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228441.1;locus_tag=PHA56_RS05720;product=hydrogenase expression/formation protein HypE;protein_id=WP_119834359.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1193635 1194756 . - . ID=gene-PHA56_RS05725;Name=hypD;gbkey=Gene;gene=hypD;gene_biotype=protein_coding;locus_tag=PHA56_RS05725;old_locus_tag=PHA56_05725 NZ_CP116214.1 Protein Homology CDS 1193635 1194756 . - 0 ID=cds-WP_042945928.1;Parent=gene-PHA56_RS05725;Dbxref=Genbank:WP_042945928.1;Name=WP_042945928.1;Ontology_term=GO:0036211,GO:0016530;gbkey=CDS;gene=hypD;go_function=metallochaperone activity|0016530||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708530.1;locus_tag=PHA56_RS05725;product=hydrogenase formation protein HypD;protein_id=WP_042945928.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1194757 1195029 . - . ID=gene-PHA56_RS05730;Name=PHA56_RS05730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS05730;old_locus_tag=PHA56_05730 NZ_CP116214.1 Protein Homology CDS 1194757 1195029 . - 0 ID=cds-WP_014839320.1;Parent=gene-PHA56_RS05730;Dbxref=Genbank:WP_014839320.1;Name=WP_014839320.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228439.1;locus_tag=PHA56_RS05730;product=HypC/HybG/HupF family hydrogenase formation chaperone;protein_id=WP_014839320.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1195020 1195892 . - . ID=gene-PHA56_RS05735;Name=hypB;gbkey=Gene;gene=hypB;gene_biotype=protein_coding;locus_tag=PHA56_RS05735;old_locus_tag=PHA56_05735 NZ_CP116214.1 Protein Homology CDS 1195020 1195892 . - 0 ID=cds-WP_014226534.1;Parent=gene-PHA56_RS05735;Dbxref=Genbank:WP_014226534.1;Name=WP_014226534.1;Ontology_term=GO:0051604,GO:0003924,GO:0016151;gbkey=CDS;gene=hypB;go_function=GTPase activity|0003924||IEA,nickel cation binding|0016151||IEA;go_process=protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311610.1;locus_tag=PHA56_RS05735;product=hydrogenase nickel incorporation protein HypB;protein_id=WP_014226534.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1195900 1196244 . - . ID=gene-PHA56_RS05740;Name=hypA;gbkey=Gene;gene=hypA;gene_biotype=protein_coding;locus_tag=PHA56_RS05740;old_locus_tag=PHA56_05740 NZ_CP116214.1 Protein Homology CDS 1195900 1196244 . - 0 ID=cds-WP_004114752.1;Parent=gene-PHA56_RS05740;Dbxref=Genbank:WP_004114752.1;Name=WP_004114752.1;Ontology_term=GO:0036211,GO:0008901;gbkey=CDS;gene=hypA;go_function=ferredoxin hydrogenase activity|0008901||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228436.1;locus_tag=PHA56_RS05740;product=hydrogenase maturation nickel metallochaperone HypA;protein_id=WP_004114752.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1196453 1196902 . + . ID=gene-PHA56_RS05745;Name=hycA;gbkey=Gene;gene=hycA;gene_biotype=protein_coding;locus_tag=PHA56_RS05745;old_locus_tag=PHA56_05745 NZ_CP116214.1 Protein Homology CDS 1196453 1196902 . + 0 ID=cds-WP_004134329.1;Parent=gene-PHA56_RS05745;Dbxref=Genbank:WP_004134329.1;Name=WP_004134329.1;gbkey=CDS;gene=hycA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004853522.1;locus_tag=PHA56_RS05745;product=formate hydrogenlyase regulator HycA;protein_id=WP_004134329.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1196985 1197593 . + . ID=gene-PHA56_RS05750;Name=PHA56_RS05750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS05750;old_locus_tag=PHA56_05750 NZ_CP116214.1 Protein Homology CDS 1196985 1197593 . + 0 ID=cds-WP_014839318.1;Parent=gene-PHA56_RS05750;Dbxref=Genbank:WP_014839318.1;Name=WP_014839318.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228434.1;locus_tag=PHA56_RS05750;product=4Fe-4S dicluster domain-containing protein;protein_id=WP_014839318.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1197590 1199416 . + . ID=gene-PHA56_RS05755;Name=hycC;gbkey=Gene;gene=hycC;gene_biotype=protein_coding;locus_tag=PHA56_RS05755;old_locus_tag=PHA56_05755 NZ_CP116214.1 Protein Homology CDS 1197590 1199416 . + 0 ID=cds-WP_032720428.1;Parent=gene-PHA56_RS05755;Dbxref=Genbank:WP_032720428.1;Name=WP_032720428.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=hycC;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228433.1;locus_tag=PHA56_RS05755;product=formate hydrogenlyase subunit 3;protein_id=WP_032720428.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1199419 1200342 . + . ID=gene-PHA56_RS05760;Name=PHA56_RS05760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS05760;old_locus_tag=PHA56_05760 NZ_CP116214.1 Protein Homology CDS 1199419 1200342 . + 0 ID=cds-WP_004104852.1;Parent=gene-PHA56_RS05760;Dbxref=Genbank:WP_004104852.1;Name=WP_004104852.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228432.1;locus_tag=PHA56_RS05760;product=respiratory chain complex I subunit 1 family protein;protein_id=WP_004104852.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1200360 1202069 . + . ID=gene-PHA56_RS05765;Name=hycE;gbkey=Gene;gene=hycE;gene_biotype=protein_coding;locus_tag=PHA56_RS05765;old_locus_tag=PHA56_05765 NZ_CP116214.1 Protein Homology CDS 1200360 1202069 . + 0 ID=cds-WP_014839316.1;Parent=gene-PHA56_RS05765;Dbxref=Genbank:WP_014839316.1;Name=WP_014839316.1;gbkey=CDS;gene=hycE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130590.1;locus_tag=PHA56_RS05765;product=formate hydrogenlyase subunit HycE;protein_id=WP_014839316.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1202079 1202621 . + . ID=gene-PHA56_RS05770;Name=PHA56_RS05770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS05770;old_locus_tag=PHA56_05770 NZ_CP116214.1 Protein Homology CDS 1202079 1202621 . + 0 ID=cds-WP_009651597.1;Parent=gene-PHA56_RS05770;Dbxref=Genbank:WP_009651597.1;Name=WP_009651597.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228430.1;locus_tag=PHA56_RS05770;product=formate hydrogenlyase complex iron-sulfur subunit;protein_id=WP_009651597.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1202621 1203388 . + . ID=gene-PHA56_RS05775;Name=PHA56_RS05775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS05775;old_locus_tag=PHA56_05775 NZ_CP116214.1 Protein Homology CDS 1202621 1203388 . + 0 ID=cds-WP_014226531.1;Parent=gene-PHA56_RS05775;Dbxref=Genbank:WP_014226531.1;Name=WP_014226531.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228429.1;locus_tag=PHA56_RS05775;product=NADH-quinone oxidoreductase subunit B family protein;protein_id=WP_014226531.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1203385 1203795 . + . ID=gene-PHA56_RS05780;Name=PHA56_RS05780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS05780;old_locus_tag=PHA56_05780 NZ_CP116214.1 Protein Homology CDS 1203385 1203795 . + 0 ID=cds-WP_014226530.1;Parent=gene-PHA56_RS05780;Dbxref=Genbank:WP_014226530.1;Name=WP_014226530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228428.1;locus_tag=PHA56_RS05780;product=formate hydrogenlyase maturation HycH family protein;protein_id=WP_014226530.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1203788 1204273 . + . ID=gene-PHA56_RS05785;Name=hycI;gbkey=Gene;gene=hycI;gene_biotype=protein_coding;locus_tag=PHA56_RS05785;old_locus_tag=PHA56_05785 NZ_CP116214.1 Protein Homology CDS 1203788 1204273 . + 0 ID=cds-WP_032694626.1;Parent=gene-PHA56_RS05785;Dbxref=Genbank:WP_032694626.1;Name=WP_032694626.1;Ontology_term=GO:0036211,GO:0004190;gbkey=CDS;gene=hycI;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004124080.1;locus_tag=PHA56_RS05785;product=hydrogenase maturation peptidase HycI;protein_id=WP_032694626.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1204770 1206194 . - . ID=gene-PHA56_RS05790;Name=PHA56_RS05790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS05790;old_locus_tag=PHA56_05790 NZ_CP116214.1 Protein Homology CDS 1204770 1206194 . - 0 ID=cds-WP_032694625.1;Parent=gene-PHA56_RS05790;Dbxref=Genbank:WP_032694625.1;Name=WP_032694625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226528.1;locus_tag=PHA56_RS05790;product=6-phospho-beta-glucosidase;protein_id=WP_032694625.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1206221 1207663 . - . ID=gene-PHA56_RS05795;Name=ascF;gbkey=Gene;gene=ascF;gene_biotype=protein_coding;locus_tag=PHA56_RS05795;old_locus_tag=PHA56_05795 NZ_CP116214.1 Protein Homology CDS 1206221 1207663 . - 0 ID=cds-WP_004104835.1;Parent=gene-PHA56_RS05795;Dbxref=Genbank:WP_004104835.1;Name=WP_004104835.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;gene=ascF;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228424.1;locus_tag=PHA56_RS05795;product=PTS cellobiose/arbutin/salicin transporter subunit IIBC;protein_id=WP_004104835.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1207920 1208933 . + . ID=gene-PHA56_RS05800;Name=PHA56_RS05800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS05800;old_locus_tag=PHA56_05800 NZ_CP116214.1 Protein Homology CDS 1207920 1208933 . + 0 ID=cds-WP_014226526.1;Parent=gene-PHA56_RS05800;Dbxref=Genbank:WP_014226526.1;Name=WP_014226526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228422.1;locus_tag=PHA56_RS05800;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_014226526.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1209068 1209595 . + . ID=gene-PHA56_RS05805;Name=hydN;gbkey=Gene;gene=hydN;gene_biotype=protein_coding;locus_tag=PHA56_RS05805;old_locus_tag=PHA56_05805 NZ_CP116214.1 Protein Homology CDS 1209068 1209595 . + 0 ID=cds-WP_014226525.1;Parent=gene-PHA56_RS05805;Dbxref=Genbank:WP_014226525.1;Name=WP_014226525.1;gbkey=CDS;gene=hydN;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228421.1;locus_tag=PHA56_RS05805;product=electron transport protein HydN;protein_id=WP_014226525.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1209608 1211827 . + . ID=gene-PHA56_RS05810;Name=hypF;gbkey=Gene;gene=hypF;gene_biotype=protein_coding;locus_tag=PHA56_RS05810;old_locus_tag=PHA56_05810 NZ_CP116214.1 Protein Homology CDS 1209608 1211827 . + 0 ID=cds-WP_038424878.1;Parent=gene-PHA56_RS05810;Dbxref=Genbank:WP_038424878.1;Name=WP_038424878.1;Ontology_term=GO:0036211,GO:0003998;gbkey=CDS;gene=hypF;go_function=acylphosphatase activity|0003998||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004134352.1;locus_tag=PHA56_RS05810;product=carbamoyltransferase HypF;protein_id=WP_038424878.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1211839 1212852 . + . ID=gene-PHA56_RS05815;Name=PHA56_RS05815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS05815;old_locus_tag=PHA56_05815 NZ_CP116214.1 Protein Homology CDS 1211839 1212852 . + 0 ID=cds-WP_025107282.1;Parent=gene-PHA56_RS05815;Dbxref=Genbank:WP_025107282.1;Name=WP_025107282.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228419.1;locus_tag=PHA56_RS05815;product=HoxN/HupN/NixA family nickel/cobalt transporter;protein_id=WP_025107282.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1213310 1214443 . - . ID=gene-PHA56_RS05820;Name=norW;gbkey=Gene;gene=norW;gene_biotype=protein_coding;locus_tag=PHA56_RS05820;old_locus_tag=PHA56_05820 NZ_CP116214.1 Protein Homology CDS 1213310 1214443 . - 0 ID=cds-WP_038424877.1;Parent=gene-PHA56_RS05820;Dbxref=Genbank:WP_038424877.1;Name=WP_038424877.1;Ontology_term=GO:0016731;gbkey=CDS;gene=norW;go_function=oxidoreductase activity%2C acting on iron-sulfur proteins as donors%2C NAD or NADP as acceptor|0016731||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228418.1;locus_tag=PHA56_RS05820;product=NADH:flavorubredoxin reductase NorW;protein_id=WP_038424877.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1214440 1215885 . - . ID=gene-PHA56_RS05825;Name=norV;gbkey=Gene;gene=norV;gene_biotype=protein_coding;locus_tag=PHA56_RS05825;old_locus_tag=PHA56_05825 NZ_CP116214.1 Protein Homology CDS 1214440 1215885 . - 0 ID=cds-WP_038424876.1;Parent=gene-PHA56_RS05825;Dbxref=Genbank:WP_038424876.1;Name=WP_038424876.1;Ontology_term=GO:0009055,GO:0010181,GO:0016966,GO:0046872;gbkey=CDS;gene=norV;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA,nitric oxide reductase activity|0016966||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228417.1;locus_tag=PHA56_RS05825;product=anaerobic nitric oxide reductase flavorubredoxin;protein_id=WP_038424876.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1216073 1217617 . + . ID=gene-PHA56_RS05830;Name=norR;gbkey=Gene;gene=norR;gene_biotype=protein_coding;locus_tag=PHA56_RS05830;old_locus_tag=PHA56_05830 NZ_CP116214.1 Protein Homology CDS 1216073 1217617 . + 0 ID=cds-WP_038424875.1;Parent=gene-PHA56_RS05830;Dbxref=Genbank:WP_038424875.1;Name=WP_038424875.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=norR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228415.1;locus_tag=PHA56_RS05830;product=nitric oxide reductase transcriptional regulator NorR;protein_id=WP_038424875.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1217580 1218545 . - . ID=gene-PHA56_RS05835;Name=gutQ;gbkey=Gene;gene=gutQ;gene_biotype=protein_coding;locus_tag=PHA56_RS05835;old_locus_tag=PHA56_05835 NZ_CP116214.1 Protein Homology CDS 1217580 1218545 . - 0 ID=cds-WP_014226519.1;Parent=gene-PHA56_RS05835;Dbxref=Genbank:WP_014226519.1;Name=WP_014226519.1;gbkey=CDS;gene=gutQ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228414.1;locus_tag=PHA56_RS05835;product=arabinose-5-phosphate isomerase GutQ;protein_id=WP_014226519.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1218538 1219311 . - . ID=gene-PHA56_RS05840;Name=PHA56_RS05840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS05840;old_locus_tag=PHA56_05840 NZ_CP116214.1 Protein Homology CDS 1218538 1219311 . - 0 ID=cds-WP_004104826.1;Parent=gene-PHA56_RS05840;Dbxref=Genbank:WP_004104826.1;Name=WP_004104826.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228413.1;locus_tag=PHA56_RS05840;product=DNA-binding transcriptional repressor;protein_id=WP_004104826.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1219380 1219739 . - . ID=gene-PHA56_RS05845;Name=gutM;gbkey=Gene;gene=gutM;gene_biotype=protein_coding;locus_tag=PHA56_RS05845;old_locus_tag=PHA56_05845 NZ_CP116214.1 Protein Homology CDS 1219380 1219739 . - 0 ID=cds-WP_038424874.1;Parent=gene-PHA56_RS05845;Dbxref=Genbank:WP_038424874.1;Name=WP_038424874.1;gbkey=CDS;gene=gutM;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228412.1;locus_tag=PHA56_RS05845;product=transcriptional regulator GutM;protein_id=WP_038424874.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1219870 1220649 . - . ID=gene-PHA56_RS05850;Name=srlD;gbkey=Gene;gene=srlD;gene_biotype=protein_coding;locus_tag=PHA56_RS05850;old_locus_tag=PHA56_05850 NZ_CP116214.1 Protein Homology CDS 1219870 1220649 . - 0 ID=cds-WP_014226518.1;Parent=gene-PHA56_RS05850;Dbxref=Genbank:WP_014226518.1;Name=WP_014226518.1;Ontology_term=GO:0016491;gbkey=CDS;gene=srlD;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228411.1;locus_tag=PHA56_RS05850;product=sorbitol-6-phosphate dehydrogenase;protein_id=WP_014226518.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1220667 1221029 . - . ID=gene-PHA56_RS05855;Name=srlB;gbkey=Gene;gene=srlB;gene_biotype=protein_coding;gene_synonym=gutB;locus_tag=PHA56_RS05855;old_locus_tag=PHA56_05855 NZ_CP116214.1 Protein Homology CDS 1220667 1221029 . - 0 ID=cds-WP_004132227.1;Parent=gene-PHA56_RS05855;Dbxref=Genbank:WP_004132227.1;Name=WP_004132227.1;gbkey=CDS;gene=srlB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228410.1;locus_tag=PHA56_RS05855;product=PTS glucitol/sorbitol transporter subunit IIA;protein_id=WP_004132227.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1221043 1222020 . - . ID=gene-PHA56_RS05860;Name=PHA56_RS05860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS05860;old_locus_tag=PHA56_05860 NZ_CP116214.1 Protein Homology CDS 1221043 1222020 . - 0 ID=cds-WP_014226517.1;Parent=gene-PHA56_RS05860;Dbxref=Genbank:WP_014226517.1;Name=WP_014226517.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228409.1;locus_tag=PHA56_RS05860;product=PTS glucitol/sorbitol transporter subunit IIB;protein_id=WP_014226517.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1222017 1222580 . - . ID=gene-PHA56_RS05865;Name=srlA;gbkey=Gene;gene=srlA;gene_biotype=protein_coding;gene_synonym=gutA;locus_tag=PHA56_RS05865;old_locus_tag=PHA56_05865 NZ_CP116214.1 Protein Homology CDS 1222017 1222580 . - 0 ID=cds-WP_004104818.1;Parent=gene-PHA56_RS05865;Dbxref=Genbank:WP_004104818.1;Name=WP_004104818.1;gbkey=CDS;gene=srlA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228408.1;locus_tag=PHA56_RS05865;product=PTS glucitol/sorbitol transporter subunit IIC;protein_id=WP_004104818.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1222654 1223679 . - . ID=gene-PHA56_RS05870;Name=PHA56_RS05870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS05870;old_locus_tag=PHA56_05870 NZ_CP116214.1 Protein Homology CDS 1222654 1223679 . - 0 ID=cds-WP_040118421.1-2;Parent=gene-PHA56_RS05870;Dbxref=Genbank:WP_040118421.1;Name=WP_040118421.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011144720.1;locus_tag=PHA56_RS05870;product=IS630 family transposase;protein_id=WP_040118421.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1223941 1225017 . + . ID=gene-PHA56_RS05875;Name=mltB;gbkey=Gene;gene=mltB;gene_biotype=protein_coding;locus_tag=PHA56_RS05875;old_locus_tag=PHA56_05875 NZ_CP116214.1 Protein Homology CDS 1223941 1225017 . + 0 ID=cds-WP_009651581.1;Parent=gene-PHA56_RS05875;Dbxref=Genbank:WP_009651581.1;Name=WP_009651581.1;gbkey=CDS;gene=mltB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461752.1;locus_tag=PHA56_RS05875;product=lytic murein transglycosylase B;protein_id=WP_009651581.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1225221 1225931 . + . ID=gene-PHA56_RS05880;Name=PHA56_RS05880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS05880;old_locus_tag=PHA56_05880 NZ_CP116214.1 Protein Homology CDS 1225221 1225931 . + 0 ID=cds-WP_162557671.1;Parent=gene-PHA56_RS05880;Dbxref=Genbank:WP_162557671.1;Name=WP_162557671.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015585886.1;locus_tag=PHA56_RS05880;product=ATP-binding cassette domain-containing protein;protein_id=WP_162557671.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1225928 1226791 . + . ID=gene-PHA56_RS05885;Name=PHA56_RS05885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS05885;old_locus_tag=PHA56_05885 NZ_CP116214.1 Protein Homology CDS 1225928 1226791 . + 0 ID=cds-WP_038424873.1;Parent=gene-PHA56_RS05885;Dbxref=Genbank:WP_038424873.1;Name=WP_038424873.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228405.1;locus_tag=PHA56_RS05885;product=metal ABC transporter permease;protein_id=WP_038424873.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1226800 1227678 . + . ID=gene-PHA56_RS05890;Name=PHA56_RS05890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS05890;old_locus_tag=PHA56_05890 NZ_CP116214.1 Protein Homology CDS 1226800 1227678 . + 0 ID=cds-WP_014226514.1;Parent=gene-PHA56_RS05890;Dbxref=Genbank:WP_014226514.1;Name=WP_014226514.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228404.1;locus_tag=PHA56_RS05890;product=metal ABC transporter substrate-binding protein;protein_id=WP_014226514.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1227715 1227942 . - . ID=gene-PHA56_RS05895;Name=PHA56_RS05895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS05895;old_locus_tag=PHA56_05895 NZ_CP116214.1 Protein Homology CDS 1227715 1227942 . - 0 ID=cds-WP_014226513.1;Parent=gene-PHA56_RS05895;Dbxref=Genbank:WP_014226513.1;Name=WP_014226513.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226513.1;locus_tag=PHA56_RS05895;product=hypothetical protein;protein_id=WP_014226513.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1228147 1228644 . + . ID=gene-PHA56_RS05900;Name=pncC;gbkey=Gene;gene=pncC;gene_biotype=protein_coding;locus_tag=PHA56_RS05900;old_locus_tag=PHA56_05900 NZ_CP116214.1 Protein Homology CDS 1228147 1228644 . + 0 ID=cds-WP_014226512.1;Parent=gene-PHA56_RS05900;Dbxref=Genbank:WP_014226512.1;Name=WP_014226512.1;gbkey=CDS;gene=pncC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228403.1;locus_tag=PHA56_RS05900;product=nicotinamide-nucleotide amidase;protein_id=WP_014226512.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1228725 1229783 . + . ID=gene-PHA56_RS05905;Name=recA;gbkey=Gene;gene=recA;gene_biotype=protein_coding;locus_tag=PHA56_RS05905;old_locus_tag=PHA56_05905 NZ_CP116214.1 Protein Homology CDS 1228725 1229783 . + 0 ID=cds-WP_004104808.1;Parent=gene-PHA56_RS05905;Dbxref=Genbank:WP_004104808.1;Name=WP_004104808.1;Ontology_term=GO:0006281,GO:0006310,GO:0009432,GO:0003677,GO:0008094,GO:0005737;gbkey=CDS;gene=recA;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA,ATP-dependent activity%2C acting on DNA|0008094||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA,SOS response|0009432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228402.1;locus_tag=PHA56_RS05905;product=recombinase RecA;protein_id=WP_004104808.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1229855 1230355 . + . ID=gene-PHA56_RS05910;Name=recX;gbkey=Gene;gene=recX;gene_biotype=protein_coding;locus_tag=PHA56_RS05910;old_locus_tag=PHA56_05910 NZ_CP116214.1 Protein Homology CDS 1229855 1230355 . + 0 ID=cds-WP_014226510.1;Parent=gene-PHA56_RS05910;Dbxref=Genbank:WP_014226510.1;Name=WP_014226510.1;gbkey=CDS;gene=recX;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228401.1;locus_tag=PHA56_RS05910;product=recombination regulator RecX;protein_id=WP_014226510.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1230486 1233113 . + . ID=gene-PHA56_RS05915;Name=alaS;gbkey=Gene;gene=alaS;gene_biotype=protein_coding;locus_tag=PHA56_RS05915;old_locus_tag=PHA56_05915 NZ_CP116214.1 Protein Homology CDS 1230486 1233113 . + 0 ID=cds-WP_038424872.1;Parent=gene-PHA56_RS05915;Dbxref=Genbank:WP_038424872.1;Name=WP_038424872.1;Ontology_term=GO:0006419,GO:0004813,GO:0005737;gbkey=CDS;gene=alaS;go_component=cytoplasm|0005737||IEA;go_function=alanine-tRNA ligase activity|0004813||IEA;go_process=alanyl-tRNA aminoacylation|0006419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228400.1;locus_tag=PHA56_RS05915;product=alanine--tRNA ligase;protein_id=WP_038424872.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1233352 1233537 . + . ID=gene-PHA56_RS05920;Name=csrA;gbkey=Gene;gene=csrA;gene_biotype=protein_coding;locus_tag=PHA56_RS05920;old_locus_tag=PHA56_05920 NZ_CP116214.1 Protein Homology CDS 1233352 1233537 . + 0 ID=cds-WP_000906486.1;Parent=gene-PHA56_RS05920;Dbxref=Genbank:WP_000906486.1;Name=WP_000906486.1;gbkey=CDS;gene=csrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001774971.1;locus_tag=PHA56_RS05920;product=carbon storage regulator CsrA;protein_id=WP_000906486.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1233861 1233953 . + . ID=gene-PHA56_RS05925;Name=PHA56_RS05925;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA56_RS05925;old_locus_tag=PHA56_05925 NZ_CP116214.1 tRNAscan-SE tRNA 1233861 1233953 . + . ID=rna-PHA56_RS05925;Parent=gene-PHA56_RS05925;anticodon=(pos:1233895..1233897);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS05925;product=tRNA-Ser NZ_CP116214.1 tRNAscan-SE exon 1233861 1233953 . + . ID=exon-PHA56_RS05925-1;Parent=rna-PHA56_RS05925;anticodon=(pos:1233895..1233897);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS05925;product=tRNA-Ser NZ_CP116214.1 RefSeq gene 1233958 1234034 . + . ID=gene-PHA56_RS05930;Name=PHA56_RS05930;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA56_RS05930;old_locus_tag=PHA56_05930 NZ_CP116214.1 tRNAscan-SE tRNA 1233958 1234034 . + . ID=rna-PHA56_RS05930;Parent=gene-PHA56_RS05930;anticodon=(pos:1233992..1233994);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS05930;product=tRNA-Arg NZ_CP116214.1 tRNAscan-SE exon 1233958 1234034 . + . ID=exon-PHA56_RS05930-1;Parent=rna-PHA56_RS05930;anticodon=(pos:1233992..1233994);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS05930;product=tRNA-Arg NZ_CP116214.1 RefSeq gene 1234095 1234171 . + . ID=gene-PHA56_RS05935;Name=PHA56_RS05935;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA56_RS05935;old_locus_tag=PHA56_05935 NZ_CP116214.1 tRNAscan-SE tRNA 1234095 1234171 . + . ID=rna-PHA56_RS05935;Parent=gene-PHA56_RS05935;anticodon=(pos:1234129..1234131);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS05935;product=tRNA-Arg NZ_CP116214.1 tRNAscan-SE exon 1234095 1234171 . + . ID=exon-PHA56_RS05935-1;Parent=rna-PHA56_RS05935;anticodon=(pos:1234129..1234131);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS05935;product=tRNA-Arg NZ_CP116214.1 RefSeq gene 1234364 1234440 . + . ID=gene-PHA56_RS05940;Name=PHA56_RS05940;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA56_RS05940;old_locus_tag=PHA56_05940 NZ_CP116214.1 tRNAscan-SE tRNA 1234364 1234440 . + . ID=rna-PHA56_RS05940;Parent=gene-PHA56_RS05940;anticodon=(pos:1234398..1234400);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS05940;product=tRNA-Arg NZ_CP116214.1 tRNAscan-SE exon 1234364 1234440 . + . ID=exon-PHA56_RS05940-1;Parent=rna-PHA56_RS05940;anticodon=(pos:1234398..1234400);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS05940;product=tRNA-Arg NZ_CP116214.1 RefSeq gene 1234623 1234699 . + . ID=gene-PHA56_RS05945;Name=PHA56_RS05945;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA56_RS05945;old_locus_tag=PHA56_05945 NZ_CP116214.1 tRNAscan-SE tRNA 1234623 1234699 . + . ID=rna-PHA56_RS05945;Parent=gene-PHA56_RS05945;anticodon=(pos:1234657..1234659);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS05945;product=tRNA-Arg NZ_CP116214.1 tRNAscan-SE exon 1234623 1234699 . + . ID=exon-PHA56_RS05945-1;Parent=rna-PHA56_RS05945;anticodon=(pos:1234657..1234659);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS05945;product=tRNA-Arg NZ_CP116214.1 RefSeq gene 1235101 1235415 . + . ID=gene-PHA56_RS05950;Name=PHA56_RS05950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS05950;old_locus_tag=PHA56_05950 NZ_CP116214.1 Protein Homology CDS 1235101 1235415 . + 0 ID=cds-WP_004853477.1;Parent=gene-PHA56_RS05950;Dbxref=Genbank:WP_004853477.1;Name=WP_004853477.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228397.1;locus_tag=PHA56_RS05950;product=BON domain-containing protein;protein_id=WP_004853477.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1235543 1236109 . + . ID=gene-PHA56_RS05955;Name=yqaB;gbkey=Gene;gene=yqaB;gene_biotype=protein_coding;locus_tag=PHA56_RS05955;old_locus_tag=PHA56_05955 NZ_CP116214.1 Protein Homology CDS 1235543 1236109 . + 0 ID=cds-WP_014226508.1;Parent=gene-PHA56_RS05955;Dbxref=Genbank:WP_014226508.1;Name=WP_014226508.1;gbkey=CDS;gene=yqaB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228396.1;locus_tag=PHA56_RS05955;product=fructose-1-phosphate/6-phosphogluconate phosphatase;protein_id=WP_014226508.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1236106 1236534 . + . ID=gene-PHA56_RS05960;Name=PHA56_RS05960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS05960;old_locus_tag=PHA56_05960 NZ_CP116214.1 Protein Homology CDS 1236106 1236534 . + 0 ID=cds-WP_025107289.1;Parent=gene-PHA56_RS05960;Dbxref=Genbank:WP_025107289.1;Name=WP_025107289.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228395.1;locus_tag=PHA56_RS05960;product=YqaA family protein;protein_id=WP_025107289.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1236601 1238157 . + . ID=gene-PHA56_RS05965;Name=gshA;gbkey=Gene;gene=gshA;gene_biotype=protein_coding;locus_tag=PHA56_RS05965;old_locus_tag=PHA56_05965 NZ_CP116214.1 Protein Homology CDS 1236601 1238157 . + 0 ID=cds-WP_038424871.1;Parent=gene-PHA56_RS05965;Dbxref=Genbank:WP_038424871.1;Name=WP_038424871.1;Ontology_term=GO:0006750,GO:0004357;gbkey=CDS;gene=gshA;go_function=glutamate-cysteine ligase activity|0004357||IEA;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228394.1;locus_tag=PHA56_RS05965;product=glutamate--cysteine ligase;protein_id=WP_038424871.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1238323 1238838 . + . ID=gene-PHA56_RS05970;Name=luxS;gbkey=Gene;gene=luxS;gene_biotype=protein_coding;locus_tag=PHA56_RS05970;old_locus_tag=PHA56_05970 NZ_CP116214.1 Protein Homology CDS 1238323 1238838 . + 0 ID=cds-WP_004104795.1;Parent=gene-PHA56_RS05970;Dbxref=Genbank:WP_004104795.1;Name=WP_004104795.1;gbkey=CDS;gene=luxS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008458247.1;locus_tag=PHA56_RS05970;product=S-ribosylhomocysteine lyase;protein_id=WP_004104795.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1238893 1239660 . + . ID=gene-PHA56_RS05975;Name=PHA56_RS05975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS05975;old_locus_tag=PHA56_05975 NZ_CP116214.1 Protein Homology CDS 1238893 1239660 . + 0 ID=cds-WP_014839297.1;Parent=gene-PHA56_RS05975;Dbxref=Genbank:WP_014839297.1;Name=WP_014839297.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228392.1;locus_tag=PHA56_RS05975;product=helix-turn-helix transcriptional regulator;protein_id=WP_014839297.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1239639 1241315 . - . ID=gene-PHA56_RS05980;Name=leuA;gbkey=Gene;gene=leuA;gene_biotype=protein_coding;locus_tag=PHA56_RS05980;old_locus_tag=PHA56_05980 NZ_CP116214.1 Protein Homology CDS 1239639 1241315 . - 0 ID=cds-WP_076752374.1;Parent=gene-PHA56_RS05980;Dbxref=Genbank:WP_076752374.1;Name=WP_076752374.1;Ontology_term=GO:0009098,GO:0003852;gbkey=CDS;gene=leuA;go_function=2-isopropylmalate synthase activity|0003852||IEA;go_process=leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228391.1;locus_tag=PHA56_RS05980;product=2-isopropylmalate synthase;protein_id=WP_076752374.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1241460 1242995 . - . ID=gene-PHA56_RS05985;Name=emrB;gbkey=Gene;gene=emrB;gene_biotype=protein_coding;locus_tag=PHA56_RS05985;old_locus_tag=PHA56_05985 NZ_CP116214.1 Protein Homology CDS 1241460 1242995 . - 0 ID=cds-WP_119834361.1;Parent=gene-PHA56_RS05985;Dbxref=Genbank:WP_119834361.1;Name=WP_119834361.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=emrB;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228390.1;locus_tag=PHA56_RS05985;product=multidrug efflux MFS transporter permease subunit EmrB;protein_id=WP_119834361.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1243011 1244183 . - . ID=gene-PHA56_RS05990;Name=emrA;gbkey=Gene;gene=emrA;gene_biotype=protein_coding;locus_tag=PHA56_RS05990;old_locus_tag=PHA56_05990 NZ_CP116214.1 Protein Homology CDS 1243011 1244183 . - 0 ID=cds-WP_014226503.1;Parent=gene-PHA56_RS05990;Dbxref=Genbank:WP_014226503.1;Name=WP_014226503.1;gbkey=CDS;gene=emrA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228389.1;locus_tag=PHA56_RS05990;product=multidrug efflux MFS transporter periplasmic adaptor subunit EmrA;protein_id=WP_014226503.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1244316 1244846 . - . ID=gene-PHA56_RS05995;Name=mprA;gbkey=Gene;gene=mprA;gene_biotype=protein_coding;locus_tag=PHA56_RS05995;old_locus_tag=PHA56_05995 NZ_CP116214.1 Protein Homology CDS 1244316 1244846 . - 0 ID=cds-WP_004104785.1;Parent=gene-PHA56_RS05995;Dbxref=Genbank:WP_004104785.1;Name=WP_004104785.1;gbkey=CDS;gene=mprA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228387.1;locus_tag=PHA56_RS05995;product=transcriptional repressor MprA;protein_id=WP_004104785.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1244938 1245273 . - . ID=gene-PHA56_RS06000;Name=ygaH;gbkey=Gene;gene=ygaH;gene_biotype=protein_coding;locus_tag=PHA56_RS06000;old_locus_tag=PHA56_06000 NZ_CP116214.1 Protein Homology CDS 1244938 1245273 . - 0 ID=cds-WP_009652550.1;Parent=gene-PHA56_RS06000;Dbxref=Genbank:WP_009652550.1;Name=WP_009652550.1;gbkey=CDS;gene=ygaH;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228385.1;locus_tag=PHA56_RS06000;product=L-valine transporter subunit YgaH;protein_id=WP_009652550.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1245263 1246009 . - . ID=gene-PHA56_RS06005;Name=PHA56_RS06005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS06005;old_locus_tag=PHA56_06005 NZ_CP116214.1 Protein Homology CDS 1245263 1246009 . - 0 ID=cds-WP_014226501.1;Parent=gene-PHA56_RS06005;Dbxref=Genbank:WP_014226501.1;Name=WP_014226501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004123979.1;locus_tag=PHA56_RS06005;product=AzlC family ABC transporter permease;protein_id=WP_014226501.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1246288 1247283 . - . ID=gene-PHA56_RS06010;Name=proX;gbkey=Gene;gene=proX;gene_biotype=protein_coding;locus_tag=PHA56_RS06010;old_locus_tag=PHA56_06010 NZ_CP116214.1 Protein Homology CDS 1246288 1247283 . - 0 ID=cds-WP_004853458.1;Parent=gene-PHA56_RS06010;Dbxref=Genbank:WP_004853458.1;Name=WP_004853458.1;Ontology_term=GO:0055085,GO:0022857,GO:0043190;gbkey=CDS;gene=proX;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228383.1;locus_tag=PHA56_RS06010;product=glycine betaine/L-proline ABC transporter substrate-binding protein ProX;protein_id=WP_004853458.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1247346 1248410 . - . ID=gene-PHA56_RS06015;Name=proW;gbkey=Gene;gene=proW;gene_biotype=protein_coding;locus_tag=PHA56_RS06015;old_locus_tag=PHA56_06015 NZ_CP116214.1 Protein Homology CDS 1247346 1248410 . - 0 ID=cds-WP_004853456.1;Parent=gene-PHA56_RS06015;Dbxref=Genbank:WP_004853456.1;Name=WP_004853456.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=proW;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417164.1;locus_tag=PHA56_RS06015;product=glycine betaine/L-proline ABC transporter permease ProW;protein_id=WP_004853456.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1248403 1249605 . - . ID=gene-PHA56_RS06020;Name=proV;gbkey=Gene;gene=proV;gene_biotype=protein_coding;locus_tag=PHA56_RS06020;old_locus_tag=PHA56_06020 NZ_CP116214.1 Protein Homology CDS 1248403 1249605 . - 0 ID=cds-WP_038424869.1;Parent=gene-PHA56_RS06020;Dbxref=Genbank:WP_038424869.1;Name=WP_038424869.1;Ontology_term=GO:0031460,GO:0005524;gbkey=CDS;gene=proV;go_function=ATP binding|0005524||IEA;go_process=glycine betaine transport|0031460||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461735.1;locus_tag=PHA56_RS06020;product=glycine betaine/L-proline ABC transporter ATP-binding protein ProV;protein_id=WP_038424869.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1249951 1250913 . - . ID=gene-PHA56_RS06025;Name=nrdF;gbkey=Gene;gene=nrdF;gene_biotype=protein_coding;locus_tag=PHA56_RS06025;old_locus_tag=PHA56_06025 NZ_CP116214.1 Protein Homology CDS 1249951 1250913 . - 0 ID=cds-WP_014226498.1;Parent=gene-PHA56_RS06025;Dbxref=Genbank:WP_014226498.1;Name=WP_014226498.1;Ontology_term=GO:0009265,GO:0004748,GO:0030145,GO:0005971;gbkey=CDS;gene=nrdF;go_component=ribonucleoside-diphosphate reductase complex|0005971||IEA;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,manganese ion binding|0030145||IEA;go_process=2'-deoxyribonucleotide biosynthetic process|0009265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228380.1;locus_tag=PHA56_RS06025;product=class 1b ribonucleoside-diphosphate reductase subunit beta;protein_id=WP_014226498.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1250924 1253068 . - . ID=gene-PHA56_RS06030;Name=nrdE;gbkey=Gene;gene=nrdE;gene_biotype=protein_coding;locus_tag=PHA56_RS06030;old_locus_tag=PHA56_06030 NZ_CP116214.1 Protein Homology CDS 1250924 1253068 . - 0 ID=cds-WP_014839292.1;Parent=gene-PHA56_RS06030;Dbxref=Genbank:WP_014839292.1;Name=WP_014839292.1;Ontology_term=GO:0006260,GO:0004748,GO:0005524;gbkey=CDS;gene=nrdE;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228379.1;locus_tag=PHA56_RS06030;product=class 1b ribonucleoside-diphosphate reductase subunit alpha;protein_id=WP_014839292.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1253041 1253451 . - . ID=gene-PHA56_RS06035;Name=nrdI;gbkey=Gene;gene=nrdI;gene_biotype=protein_coding;locus_tag=PHA56_RS06035;old_locus_tag=PHA56_06035 NZ_CP116214.1 Protein Homology CDS 1253041 1253451 . - 0 ID=cds-WP_004104769.1;Parent=gene-PHA56_RS06035;Dbxref=Genbank:WP_004104769.1;Name=WP_004104769.1;Ontology_term=GO:0009263;gbkey=CDS;gene=nrdI;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228378.1;locus_tag=PHA56_RS06035;product=class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI;protein_id=WP_004104769.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1253448 1253693 . - . ID=gene-PHA56_RS06040;Name=nrdH;gbkey=Gene;gene=nrdH;gene_biotype=protein_coding;locus_tag=PHA56_RS06040;old_locus_tag=PHA56_06040 NZ_CP116214.1 Protein Homology CDS 1253448 1253693 . - 0 ID=cds-WP_004853449.1;Parent=gene-PHA56_RS06040;Dbxref=Genbank:WP_004853449.1;Name=WP_004853449.1;gbkey=CDS;gene=nrdH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004853449.1;locus_tag=PHA56_RS06040;product=glutaredoxin-like protein NrdH;protein_id=WP_004853449.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1253877 1254308 . - . ID=gene-PHA56_RS06045;Name=PHA56_RS06045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS06045;old_locus_tag=PHA56_06045 NZ_CP116214.1 Protein Homology CDS 1253877 1254308 . - 0 ID=cds-WP_004853446.1;Parent=gene-PHA56_RS06045;Dbxref=Genbank:WP_004853446.1;Name=WP_004853446.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228376.1;locus_tag=PHA56_RS06045;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_004853446.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1254396 1255754 . + . ID=gene-PHA56_RS06050;Name=PHA56_RS06050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS06050;old_locus_tag=PHA56_06050 NZ_CP116214.1 Protein Homology CDS 1254396 1255754 . + 0 ID=cds-WP_038424867.1;Parent=gene-PHA56_RS06050;Dbxref=Genbank:WP_038424867.1;Name=WP_038424867.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226495.1;locus_tag=PHA56_RS06050;product=PLP-dependent aminotransferase family protein;protein_id=WP_038424867.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1255818 1256144 . - . ID=gene-PHA56_RS06055;Name=PHA56_RS06055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS06055;old_locus_tag=PHA56_06055 NZ_CP116214.1 Protein Homology CDS 1255818 1256144 . - 0 ID=cds-WP_004123945.1;Parent=gene-PHA56_RS06055;Dbxref=Genbank:WP_004123945.1;Name=WP_004123945.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228374.1;locus_tag=PHA56_RS06055;product=DUF883 family protein;protein_id=WP_004123945.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1256294 1256644 . + . ID=gene-PHA56_RS06060;Name=PHA56_RS06060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS06060;old_locus_tag=PHA56_06060 NZ_CP116214.1 Protein Homology CDS 1256294 1256644 . + 0 ID=cds-WP_004123942.1;Parent=gene-PHA56_RS06060;Dbxref=Genbank:WP_004123942.1;Name=WP_004123942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004123942.1;locus_tag=PHA56_RS06060;product=DUF2002 family protein;protein_id=WP_004123942.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1256686 1257135 . - . ID=gene-PHA56_RS06065;Name=alaE;gbkey=Gene;gene=alaE;gene_biotype=protein_coding;locus_tag=PHA56_RS06065;old_locus_tag=PHA56_06065 NZ_CP116214.1 Protein Homology CDS 1256686 1257135 . - 0 ID=cds-WP_014839290.1;Parent=gene-PHA56_RS06065;Dbxref=Genbank:WP_014839290.1;Name=WP_014839290.1;gbkey=CDS;gene=alaE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228372.1;locus_tag=PHA56_RS06065;product=L-alanine exporter AlaE;protein_id=WP_014839290.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1257841 1258242 . + . ID=gene-PHA56_RS06070;Name=stpA;gbkey=Gene;gene=stpA;gene_biotype=protein_coding;locus_tag=PHA56_RS06070;old_locus_tag=PHA56_06070 NZ_CP116214.1 Protein Homology CDS 1257841 1258242 . + 0 ID=cds-WP_014839288.1;Parent=gene-PHA56_RS06070;Dbxref=Genbank:WP_014839288.1;Name=WP_014839288.1;gbkey=CDS;gene=stpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004205720.1;locus_tag=PHA56_RS06070;product=DNA-binding protein StpA;protein_id=WP_014839288.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1258289 1258468 . - . ID=gene-PHA56_RS06075;Name=PHA56_RS06075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS06075;old_locus_tag=PHA56_06075 NZ_CP116214.1 Protein Homology CDS 1258289 1258468 . - 0 ID=cds-WP_014226493.1;Parent=gene-PHA56_RS06075;Dbxref=Genbank:WP_014226493.1;Name=WP_014226493.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002914284.1;locus_tag=PHA56_RS06075;product=hypothetical protein;protein_id=WP_014226493.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1258559 1259080 . - . ID=gene-PHA56_RS06080;Name=PHA56_RS06080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS06080;old_locus_tag=PHA56_06080 NZ_CP116214.1 Protein Homology CDS 1258559 1259080 . - 0 ID=cds-WP_014839287.1;Parent=gene-PHA56_RS06080;Dbxref=Genbank:WP_014839287.1;Name=WP_014839287.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014839287.1;locus_tag=PHA56_RS06080;product=rhodanese family protein;protein_id=WP_014839287.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1259090 1259389 . - . ID=gene-PHA56_RS06085;Name=PHA56_RS06085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS06085;old_locus_tag=PHA56_06085 NZ_CP116214.1 Protein Homology CDS 1259090 1259389 . - 0 ID=cds-WP_014226491.1;Parent=gene-PHA56_RS06085;Dbxref=Genbank:WP_014226491.1;Name=WP_014226491.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228366.1;locus_tag=PHA56_RS06085;product=metalloregulator ArsR/SmtB family transcription factor;protein_id=WP_014226491.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1259572 1260168 . + . ID=gene-PHA56_RS06090;Name=PHA56_RS06090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS06090;old_locus_tag=PHA56_06090 NZ_CP116214.1 Protein Homology CDS 1259572 1260168 . + 0 ID=cds-WP_032694783.1;Parent=gene-PHA56_RS06090;Dbxref=Genbank:WP_032694783.1;Name=WP_032694783.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004205726.1;locus_tag=PHA56_RS06090;product=phosphatase PAP2 family protein;protein_id=WP_032694783.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1260182 1261969 . - . ID=gene-PHA56_RS06095;Name=PHA56_RS06095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS06095;old_locus_tag=PHA56_06095 NZ_CP116214.1 Protein Homology CDS 1260182 1261969 . - 0 ID=cds-WP_032694784.1;Parent=gene-PHA56_RS06095;Dbxref=Genbank:WP_032694784.1;Name=WP_032694784.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004123925.1;locus_tag=PHA56_RS06095;product=sigma-54-dependent Fis family transcriptional regulator;protein_id=WP_032694784.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1262219 1263739 . + . ID=gene-PHA56_RS06100;Name=PHA56_RS06100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS06100;old_locus_tag=PHA56_06100 NZ_CP116214.1 Protein Homology CDS 1262219 1263739 . + 0 ID=cds-WP_004853428.1;Parent=gene-PHA56_RS06100;Dbxref=Genbank:WP_004853428.1;Name=WP_004853428.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015370094.1;locus_tag=PHA56_RS06100;product=aldehyde dehydrogenase;protein_id=WP_004853428.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1264404 1265000 . + . ID=gene-PHA56_RS06105;Name=PHA56_RS06105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS06105;old_locus_tag=PHA56_06105 NZ_CP116214.1 Protein Homology CDS 1264404 1265000 . + 0 ID=cds-WP_014226488.1;Parent=gene-PHA56_RS06105;Dbxref=Genbank:WP_014226488.1;Name=WP_014226488.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002914266.1;locus_tag=PHA56_RS06105;product=fimbrial protein;protein_id=WP_014226488.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1265161 1265820 . + . ID=gene-PHA56_RS06110;Name=PHA56_RS06110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS06110;old_locus_tag=PHA56_06110 NZ_CP116214.1 Protein Homology CDS 1265161 1265820 . + 0 ID=cds-WP_032694785.1;Parent=gene-PHA56_RS06110;Dbxref=Genbank:WP_032694785.1;Name=WP_032694785.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004205730.1;locus_tag=PHA56_RS06110;product=molecular chaperone;protein_id=WP_032694785.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1265849 1268383 . + . ID=gene-PHA56_RS06115;Name=PHA56_RS06115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS06115;old_locus_tag=PHA56_06115 NZ_CP116214.1 Protein Homology CDS 1265849 1268383 . + 0 ID=cds-WP_038424865.1;Parent=gene-PHA56_RS06115;Dbxref=Genbank:WP_038424865.1;Name=WP_038424865.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004114682.1;locus_tag=PHA56_RS06115;product=fimbrial biogenesis outer membrane usher protein;protein_id=WP_038424865.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1268432 1269496 . + . ID=gene-PHA56_RS06120;Name=PHA56_RS06120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS06120;old_locus_tag=PHA56_06120 NZ_CP116214.1 Protein Homology CDS 1268432 1269496 . + 0 ID=cds-WP_050595154.1;Parent=gene-PHA56_RS06120;Dbxref=Genbank:WP_050595154.1;Name=WP_050595154.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004135073.1;locus_tag=PHA56_RS06120;product=fimbrial protein;protein_id=WP_050595154.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1269632 1270426 . + . ID=gene-PHA56_RS06125;Name=PHA56_RS06125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS06125;old_locus_tag=PHA56_06125 NZ_CP116214.1 Protein Homology CDS 1269632 1270426 . + 0 ID=cds-WP_032694788.1;Parent=gene-PHA56_RS06125;Dbxref=Genbank:WP_032694788.1;Name=WP_032694788.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004853416.1;locus_tag=PHA56_RS06125;product=CatB-related O-acetyltransferase;protein_id=WP_032694788.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1270462 1271235 . + . ID=gene-PHA56_RS06130;Name=PHA56_RS06130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS06130;old_locus_tag=PHA56_06130 NZ_CP116214.1 Protein Homology CDS 1270462 1271235 . + 0 ID=cds-WP_038424864.1;Parent=gene-PHA56_RS06130;Dbxref=Genbank:WP_038424864.1;Name=WP_038424864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009652524.1;locus_tag=PHA56_RS06130;product=transporter substrate-binding domain-containing protein;protein_id=WP_038424864.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1271275 1272195 . - . ID=gene-PHA56_RS06135;Name=PHA56_RS06135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS06135;old_locus_tag=PHA56_06135 NZ_CP116214.1 Protein Homology CDS 1271275 1272195 . - 0 ID=cds-WP_014839277.1;Parent=gene-PHA56_RS06135;Dbxref=Genbank:WP_014839277.1;Name=WP_014839277.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014839277.1;locus_tag=PHA56_RS06135;product=LysR substrate-binding domain-containing protein;protein_id=WP_014839277.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1272341 1273117 . + . ID=gene-PHA56_RS06140;Name=PHA56_RS06140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS06140;old_locus_tag=PHA56_06140 NZ_CP116214.1 Protein Homology CDS 1272341 1273117 . + 0 ID=cds-WP_014839276.1;Parent=gene-PHA56_RS06140;Dbxref=Genbank:WP_014839276.1;Name=WP_014839276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004123898.1;locus_tag=PHA56_RS06140;product=SDR family oxidoreductase;protein_id=WP_014839276.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1273181 1274374 . + . ID=gene-PHA56_RS06145;Name=PHA56_RS06145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS06145;old_locus_tag=PHA56_06145 NZ_CP116214.1 Protein Homology CDS 1273181 1274374 . + 0 ID=cds-WP_014839275.1;Parent=gene-PHA56_RS06145;Dbxref=Genbank:WP_014839275.1;Name=WP_014839275.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226481.1;locus_tag=PHA56_RS06145;product=MFS transporter;protein_id=WP_014839275.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1274780 1276174 . + . ID=gene-PHA56_RS06150;Name=PHA56_RS06150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS06150;old_locus_tag=PHA56_06150 NZ_CP116214.1 Protein Homology CDS 1274780 1276174 . + 0 ID=cds-WP_032694790.1;Parent=gene-PHA56_RS06150;Dbxref=Genbank:WP_032694790.1;Name=WP_032694790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012908228.1;locus_tag=PHA56_RS06150;product=cytochrome c peroxidase;protein_id=WP_032694790.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1276182 1276823 . + . ID=gene-PHA56_RS06155;Name=ccmA;gbkey=Gene;gene=ccmA;gene_biotype=protein_coding;locus_tag=PHA56_RS06155;old_locus_tag=PHA56_06155 NZ_CP116214.1 Protein Homology CDS 1276182 1276823 . + 0 ID=cds-WP_032694815.1;Parent=gene-PHA56_RS06155;Dbxref=Genbank:WP_032694815.1;Name=WP_032694815.1;Ontology_term=GO:0017004,GO:0005524,GO:0022857;gbkey=CDS;gene=ccmA;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226479.1;locus_tag=PHA56_RS06155;product=cytochrome c biogenesis heme-transporting ATPase CcmA;protein_id=WP_032694815.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1276823 1277479 . + . ID=gene-PHA56_RS06160;Name=ccmB;gbkey=Gene;gene=ccmB;gene_biotype=protein_coding;locus_tag=PHA56_RS06160;old_locus_tag=PHA56_06160 NZ_CP116214.1 Protein Homology CDS 1276823 1277479 . + 0 ID=cds-WP_086074038.1;Parent=gene-PHA56_RS06160;Dbxref=Genbank:WP_086074038.1;Name=WP_086074038.1;Ontology_term=GO:0015886,GO:0015232;gbkey=CDS;gene=ccmB;go_function=heme transmembrane transporter activity|0015232||IEA;go_process=heme transport|0015886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226478.1;locus_tag=PHA56_RS06160;product=heme exporter protein CcmB;protein_id=WP_086074038.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1277576 1278313 . + . ID=gene-PHA56_RS06165;Name=PHA56_RS06165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS06165;old_locus_tag=PHA56_06165 NZ_CP116214.1 Protein Homology CDS 1277576 1278313 . + 0 ID=cds-WP_014839270.1;Parent=gene-PHA56_RS06165;Dbxref=Genbank:WP_014839270.1;Name=WP_014839270.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311115.1;locus_tag=PHA56_RS06165;product=heme ABC transporter permease;protein_id=WP_014839270.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1278310 1278513 . + . ID=gene-PHA56_RS06170;Name=ccmD;gbkey=Gene;gene=ccmD;gene_biotype=protein_coding;locus_tag=PHA56_RS06170;old_locus_tag=PHA56_06170 NZ_CP116214.1 Protein Homology CDS 1278310 1278513 . + 0 ID=cds-WP_014839269.1;Parent=gene-PHA56_RS06170;Dbxref=Genbank:WP_014839269.1;Name=WP_014839269.1;Ontology_term=GO:0015886,GO:0017004,GO:0016020;gbkey=CDS;gene=ccmD;go_component=membrane|0016020||IEA;go_process=heme transport|0015886||IEA,cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226476.1;locus_tag=PHA56_RS06170;product=heme exporter protein CcmD;protein_id=WP_014839269.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1278510 1278989 . + . ID=gene-PHA56_RS06175;Name=ccmE;gbkey=Gene;gene=ccmE;gene_biotype=protein_coding;locus_tag=PHA56_RS06175;old_locus_tag=PHA56_06175 NZ_CP116214.1 Protein Homology CDS 1278510 1278989 . + 0 ID=cds-WP_014839268.1;Parent=gene-PHA56_RS06175;Dbxref=Genbank:WP_014839268.1;Name=WP_014839268.1;gbkey=CDS;gene=ccmE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226475.1;locus_tag=PHA56_RS06175;product=cytochrome c maturation protein CcmE;protein_id=WP_014839268.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1278986 1280923 . + . ID=gene-PHA56_RS06180;Name=PHA56_RS06180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS06180;old_locus_tag=PHA56_06180 NZ_CP116214.1 Protein Homology CDS 1278986 1280923 . + 0 ID=cds-WP_032694791.1;Parent=gene-PHA56_RS06180;Dbxref=Genbank:WP_032694791.1;Name=WP_032694791.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014839267.1;locus_tag=PHA56_RS06180;product=heme lyase CcmF/NrfE family subunit;protein_id=WP_032694791.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1280920 1281477 . + . ID=gene-PHA56_RS06185;Name=dsbE;gbkey=Gene;gene=dsbE;gene_biotype=protein_coding;locus_tag=PHA56_RS06185;old_locus_tag=PHA56_06185 NZ_CP116214.1 Protein Homology CDS 1280920 1281477 . + 0 ID=cds-WP_032694792.1;Parent=gene-PHA56_RS06185;Dbxref=Genbank:WP_032694792.1;Name=WP_032694792.1;gbkey=CDS;gene=dsbE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014839266.1;locus_tag=PHA56_RS06185;product=thiol:disulfide interchange protein DsbE;protein_id=WP_032694792.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1281474 1282529 . + . ID=gene-PHA56_RS06190;Name=PHA56_RS06190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS06190;old_locus_tag=PHA56_06190 NZ_CP116214.1 Protein Homology CDS 1281474 1282529 . + 0 ID=cds-WP_032694793.1;Parent=gene-PHA56_RS06190;Dbxref=Genbank:WP_032694793.1;Name=WP_032694793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226472.1;locus_tag=PHA56_RS06190;product=cytochrome c-type biogenesis protein CcmH;protein_id=WP_032694793.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1282526 1283458 . - . ID=gene-PHA56_RS06195;Name=PHA56_RS06195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS06195;old_locus_tag=PHA56_06195 NZ_CP116214.1 Protein Homology CDS 1282526 1283458 . - 0 ID=cds-WP_014839264.1;Parent=gene-PHA56_RS06195;Dbxref=Genbank:WP_014839264.1;Name=WP_014839264.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014907069.1;locus_tag=PHA56_RS06195;product=glyoxylate/hydroxypyruvate reductase A;protein_id=WP_014839264.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1283464 1284192 . - . ID=gene-PHA56_RS06200;Name=PHA56_RS06200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS06200;old_locus_tag=PHA56_06200 NZ_CP116214.1 Protein Homology CDS 1283464 1284192 . - 0 ID=cds-WP_014839263.1;Parent=gene-PHA56_RS06200;Dbxref=Genbank:WP_014839263.1;Name=WP_014839263.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004135089.1;locus_tag=PHA56_RS06200;product=class II aldolase/adducin family protein;protein_id=WP_014839263.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1284193 1285713 . - . ID=gene-PHA56_RS06205;Name=PHA56_RS06205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS06205;old_locus_tag=PHA56_06205 NZ_CP116214.1 Protein Homology CDS 1284193 1285713 . - 0 ID=cds-WP_032694794.1;Parent=gene-PHA56_RS06205;Dbxref=Genbank:WP_032694794.1;Name=WP_032694794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012967389.1;locus_tag=PHA56_RS06205;product=amino acid ABC transporter permease/ATP-binding protein;protein_id=WP_032694794.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1285738 1286541 . - . ID=gene-PHA56_RS06210;Name=PHA56_RS06210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS06210;old_locus_tag=PHA56_06210 NZ_CP116214.1 Protein Homology CDS 1285738 1286541 . - 0 ID=cds-WP_025107316.1;Parent=gene-PHA56_RS06210;Dbxref=Genbank:WP_025107316.1;Name=WP_025107316.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004180963.1;locus_tag=PHA56_RS06210;product=ABC transporter substrate-binding protein;protein_id=WP_025107316.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1286551 1287627 . - . ID=gene-PHA56_RS06215;Name=PHA56_RS06215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS06215;old_locus_tag=PHA56_06215 NZ_CP116214.1 Protein Homology CDS 1286551 1287627 . - 0 ID=cds-WP_009652534.1;Parent=gene-PHA56_RS06215;Dbxref=Genbank:WP_009652534.1;Name=WP_009652534.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004114667.1;locus_tag=PHA56_RS06215;product=2-oxoglutarate and iron-dependent oxygenase domain-containing protein;protein_id=WP_009652534.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1287640 1288488 . - . ID=gene-PHA56_RS06220;Name=PHA56_RS06220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS06220;old_locus_tag=PHA56_06220 NZ_CP116214.1 Protein Homology CDS 1287640 1288488 . - 0 ID=cds-WP_032720457.1;Parent=gene-PHA56_RS06220;Dbxref=Genbank:WP_032720457.1;Name=WP_032720457.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009652556.1;locus_tag=PHA56_RS06220;product=TIM barrel protein;protein_id=WP_032720457.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1288499 1289449 . - . ID=gene-PHA56_RS06225;Name=speB;gbkey=Gene;gene=speB;gene_biotype=protein_coding;locus_tag=PHA56_RS06225;old_locus_tag=PHA56_06225 NZ_CP116214.1 Protein Homology CDS 1288499 1289449 . - 0 ID=cds-WP_014839259.1;Parent=gene-PHA56_RS06225;Dbxref=Genbank:WP_014839259.1;Name=WP_014839259.1;Ontology_term=GO:0008295,GO:0008783;gbkey=CDS;gene=speB;go_function=agmatinase activity|0008783||IEA;go_process=spermidine biosynthetic process|0008295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014839259.1;locus_tag=PHA56_RS06225;product=agmatinase;protein_id=WP_014839259.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1289566 1290477 . + . ID=gene-PHA56_RS06230;Name=PHA56_RS06230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS06230;old_locus_tag=PHA56_06230 NZ_CP116214.1 Protein Homology CDS 1289566 1290477 . + 0 ID=cds-WP_004135102.1;Parent=gene-PHA56_RS06230;Dbxref=Genbank:WP_004135102.1;Name=WP_004135102.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009652526.1;locus_tag=PHA56_RS06230;product=LysR family transcriptional regulator;protein_id=WP_004135102.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1290774 1291178 . + . ID=gene-PHA56_RS06235;Name=PHA56_RS06235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS06235;old_locus_tag=PHA56_06235 NZ_CP116214.1 Protein Homology CDS 1290774 1291178 . + 0 ID=cds-WP_119834363.1;Parent=gene-PHA56_RS06235;Dbxref=Genbank:WP_119834363.1;Name=WP_119834363.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004853381.1;locus_tag=PHA56_RS06235;product=hypothetical protein;protein_id=WP_119834363.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1291175 1292938 . + . ID=gene-PHA56_RS06240;Name=PHA56_RS06240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS06240;old_locus_tag=PHA56_06240 NZ_CP116214.1 Protein Homology CDS 1291175 1292938 . + 0 ID=cds-WP_032694796.1;Parent=gene-PHA56_RS06240;Dbxref=Genbank:WP_032694796.1;Name=WP_032694796.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009652532.1;locus_tag=PHA56_RS06240;product=hypothetical protein;protein_id=WP_032694796.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1293100 1293246 . - . ID=gene-PHA56_RS06245;Name=PHA56_RS06245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS06245;old_locus_tag=PHA56_06245 NZ_CP116214.1 GeneMarkS-2+ CDS 1293100 1293246 . - 0 ID=cds-WP_223226782.1;Parent=gene-PHA56_RS06245;Dbxref=Genbank:WP_223226782.1;Name=WP_223226782.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PHA56_RS06245;product=hypothetical protein;protein_id=WP_223226782.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1293314 1293943 . + . ID=gene-PHA56_RS06250;Name=evgA;gbkey=Gene;gene=evgA;gene_biotype=protein_coding;locus_tag=PHA56_RS06250;old_locus_tag=PHA56_06250 NZ_CP116214.1 Protein Homology CDS 1293314 1293943 . + 0 ID=cds-WP_119834364.1;Parent=gene-PHA56_RS06250;Dbxref=Genbank:WP_119834364.1;Name=WP_119834364.1;gbkey=CDS;gene=evgA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004123841.1;locus_tag=PHA56_RS06250;product=acid-sensing system DNA-binding response regulator EvgA;protein_id=WP_119834364.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1293946 1297125 . + . ID=gene-PHA56_RS06255;Name=PHA56_RS06255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS06255;old_locus_tag=PHA56_06255 NZ_CP116214.1 Protein Homology CDS 1293946 1297125 . + 0 ID=cds-WP_032694798.1;Parent=gene-PHA56_RS06255;Dbxref=Genbank:WP_032694798.1;Name=WP_032694798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012135107.1;locus_tag=PHA56_RS06255;product=transporter substrate-binding domain-containing protein;protein_id=WP_032694798.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1297582 1298100 . + . ID=gene-PHA56_RS06260;Name=PHA56_RS06260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS06260;old_locus_tag=PHA56_06260 NZ_CP116214.1 Protein Homology CDS 1297582 1298100 . + 0 ID=cds-WP_032694799.1;Parent=gene-PHA56_RS06260;Dbxref=Genbank:WP_032694799.1;Name=WP_032694799.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013365085.1;locus_tag=PHA56_RS06260;product=LuxR C-terminal-related transcriptional regulator;protein_id=WP_032694799.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1298203 1298721 . + . ID=gene-PHA56_RS06265;Name=PHA56_RS06265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS06265;old_locus_tag=PHA56_06265 NZ_CP116214.1 Protein Homology CDS 1298203 1298721 . + 0 ID=cds-WP_032694800.1;Parent=gene-PHA56_RS06265;Dbxref=Genbank:WP_032694800.1;Name=WP_032694800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004123832.1;locus_tag=PHA56_RS06265;product=fimbrial protein;protein_id=WP_032694800.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1298768 1299445 . + . ID=gene-PHA56_RS06270;Name=PHA56_RS06270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS06270;old_locus_tag=PHA56_06270 NZ_CP116214.1 Protein Homology CDS 1298768 1299445 . + 0 ID=cds-WP_032694801.1;Parent=gene-PHA56_RS06270;Dbxref=Genbank:WP_032694801.1;Name=WP_032694801.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004853358.1;locus_tag=PHA56_RS06270;product=molecular chaperone;protein_id=WP_032694801.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1299457 1301958 . + . ID=gene-PHA56_RS06275;Name=PHA56_RS06275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS06275;old_locus_tag=PHA56_06275 NZ_CP116214.1 Protein Homology CDS 1299457 1301958 . + 0 ID=cds-WP_119834365.1;Parent=gene-PHA56_RS06275;Dbxref=Genbank:WP_119834365.1;Name=WP_119834365.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004123826.1;locus_tag=PHA56_RS06275;product=fimbrial biogenesis outer membrane usher protein;protein_id=WP_119834365.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1301976 1302989 . + . ID=gene-PHA56_RS06280;Name=PHA56_RS06280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS06280;old_locus_tag=PHA56_06280 NZ_CP116214.1 Protein Homology CDS 1301976 1302989 . + 0 ID=cds-WP_032694803.1;Parent=gene-PHA56_RS06280;Dbxref=Genbank:WP_032694803.1;Name=WP_032694803.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004853355.1;locus_tag=PHA56_RS06280;product=fimbrial protein;protein_id=WP_032694803.1;transl_table=11 NZ_CP116214.1 RefSeq pseudogene 1303957 1304043 . + . ID=gene-PHA56_RS06285;Name=PHA56_RS06285;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS06285;old_locus_tag=PHA56_06285;partial=true;pseudo=true;start_range=.,1303957 NZ_CP116214.1 Protein Homology CDS 1303957 1304043 . + 0 ID=cds-PHA56_RS06285;Parent=gene-PHA56_RS06285;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226597.1;locus_tag=PHA56_RS06285;partial=true;product=type VI secretion system contractile sheath small subunit;pseudo=true;start_range=.,1303957;transl_table=11 NZ_CP116214.1 RefSeq gene 1304161 1305735 . + . ID=gene-PHA56_RS06290;Name=tssA;gbkey=Gene;gene=tssA;gene_biotype=protein_coding;locus_tag=PHA56_RS06290;old_locus_tag=PHA56_06290 NZ_CP116214.1 Protein Homology CDS 1304161 1305735 . + 0 ID=cds-WP_032720459.1;Parent=gene-PHA56_RS06290;Dbxref=Genbank:WP_032720459.1;Name=WP_032720459.1;gbkey=CDS;gene=tssA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014839255.1;locus_tag=PHA56_RS06290;product=type VI secretion system protein TssA;protein_id=WP_032720459.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1305836 1306315 . + . ID=gene-PHA56_RS06295;Name=PHA56_RS06295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS06295;old_locus_tag=PHA56_06295 NZ_CP116214.1 Protein Homology CDS 1305836 1306315 . + 0 ID=cds-WP_032720465.1;Parent=gene-PHA56_RS06295;Dbxref=Genbank:WP_032720465.1;Name=WP_032720465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226459.1;locus_tag=PHA56_RS06295;product=hypothetical protein;protein_id=WP_032720465.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1306966 1307184 . - . ID=gene-PHA56_RS06300;Name=PHA56_RS06300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS06300;old_locus_tag=PHA56_06300 NZ_CP116214.1 Protein Homology CDS 1306966 1307184 . - 0 ID=cds-WP_010434242.1;Parent=gene-PHA56_RS06300;Dbxref=Genbank:WP_010434242.1;Name=WP_010434242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014832178.1;locus_tag=PHA56_RS06300;product=hypothetical protein;protein_id=WP_010434242.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1307485 1308183 . - . ID=gene-PHA56_RS06305;Name=arsH;gbkey=Gene;gene=arsH;gene_biotype=protein_coding;locus_tag=PHA56_RS06305;old_locus_tag=PHA56_06305 NZ_CP116214.1 Protein Homology CDS 1307485 1308183 . - 0 ID=cds-WP_032938044.1;Parent=gene-PHA56_RS06305;Dbxref=Genbank:WP_032938044.1;Name=WP_032938044.1;Ontology_term=GO:0003674;gbkey=CDS;gene=arsH;go_function=molecular_function|0003674||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013572668.1;locus_tag=PHA56_RS06305;product=arsenical resistance protein ArsH;protein_id=WP_032938044.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1308269 1308589 . + . ID=gene-PHA56_RS06310;Name=PHA56_RS06310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS06310;old_locus_tag=PHA56_06310 NZ_CP116214.1 Protein Homology CDS 1308269 1308589 . + 0 ID=cds-WP_032938043.1;Parent=gene-PHA56_RS06310;Dbxref=Genbank:WP_032938043.1;Name=WP_032938043.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013749489.1;locus_tag=PHA56_RS06310;product=metalloregulator ArsR/SmtB family transcription factor;protein_id=WP_032938043.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1308634 1309923 . + . ID=gene-PHA56_RS06315;Name=PHA56_RS06315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS06315;old_locus_tag=PHA56_06315 NZ_CP116214.1 Protein Homology CDS 1308634 1309923 . + 0 ID=cds-WP_024274589.1;Parent=gene-PHA56_RS06315;Dbxref=Genbank:WP_024274589.1;Name=WP_024274589.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312401.1;locus_tag=PHA56_RS06315;product=arsenic transporter;protein_id=WP_024274589.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1309936 1310361 . + . ID=gene-PHA56_RS06320;Name=arsC;gbkey=Gene;gene=arsC;gene_biotype=protein_coding;locus_tag=PHA56_RS06320;old_locus_tag=PHA56_06320 NZ_CP116214.1 Protein Homology CDS 1309936 1310361 . + 0 ID=cds-WP_024274588.1;Parent=gene-PHA56_RS06320;Dbxref=Genbank:WP_024274588.1;Name=WP_024274588.1;Ontology_term=GO:0008794;gbkey=CDS;gene=arsC;go_function=arsenate reductase (glutaredoxin) activity|0008794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000065799.1;locus_tag=PHA56_RS06320;product=glutaredoxin-dependent arsenate reductase;protein_id=WP_024274588.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1310665 1311069 . - . ID=gene-PHA56_RS06325;Name=PHA56_RS06325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS06325;old_locus_tag=PHA56_06325 NZ_CP116214.1 Protein Homology CDS 1310665 1311069 . - 0 ID=cds-WP_024274587.1;Parent=gene-PHA56_RS06325;Dbxref=Genbank:WP_024274587.1;Name=WP_024274587.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001519859.1;locus_tag=PHA56_RS06325;product=H-NS family nucleoid-associated regulatory protein;protein_id=WP_024274587.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1311632 1311859 . - . ID=gene-PHA56_RS06330;Name=PHA56_RS06330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS06330;old_locus_tag=PHA56_06330 NZ_CP116214.1 Protein Homology CDS 1311632 1311859 . - 0 ID=cds-WP_010434226.1;Parent=gene-PHA56_RS06330;Dbxref=Genbank:WP_010434226.1;Name=WP_010434226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010434226.1;locus_tag=PHA56_RS06330;product=hypothetical protein;protein_id=WP_010434226.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1312128 1312346 . - . ID=gene-PHA56_RS06335;Name=PHA56_RS06335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS06335;old_locus_tag=PHA56_06335 NZ_CP116214.1 Protein Homology CDS 1312128 1312346 . - 0 ID=cds-WP_039077582.1;Parent=gene-PHA56_RS06335;Dbxref=Genbank:WP_039077582.1;Name=WP_039077582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000203924.1;locus_tag=PHA56_RS06335;product=cold shock domain-containing protein;protein_id=WP_039077582.1;transl_table=11 NZ_CP116214.1 RefSeq pseudogene 1312625 1312837 . + . ID=gene-PHA56_RS06340;Name=cspF;gbkey=Gene;gene=cspF;gene_biotype=pseudogene;locus_tag=PHA56_RS06340;old_locus_tag=PHA56_06340;pseudo=true NZ_CP116214.1 Protein Homology CDS 1312625 1312837 . + 0 ID=cds-PHA56_RS06340;Parent=gene-PHA56_RS06340;Note=internal stop;gbkey=CDS;gene=cspF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011233070.1;locus_tag=PHA56_RS06340;product=cold shock-like protein CspF;pseudo=true;transl_table=11 NZ_CP116214.1 RefSeq gene 1312940 1313083 . + . ID=gene-PHA56_RS06345;Name=PHA56_RS06345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS06345;old_locus_tag=PHA56_06345 NZ_CP116214.1 Protein Homology CDS 1312940 1313083 . + 0 ID=cds-WP_228961026.1;Parent=gene-PHA56_RS06345;Dbxref=Genbank:WP_228961026.1;Name=WP_228961026.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF038384.1;locus_tag=PHA56_RS06345;product=YnfU family zinc-binding protein;protein_id=WP_228961026.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1313239 1321821 . + . ID=gene-PHA56_RS06350;Name=PHA56_RS06350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS06350;old_locus_tag=PHA56_06350 NZ_CP116214.1 Protein Homology CDS 1313239 1321821 . + 0 ID=cds-WP_119834366.1;Parent=gene-PHA56_RS06350;Dbxref=Genbank:WP_119834366.1;Name=WP_119834366.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015705673.1;locus_tag=PHA56_RS06350;product=glucoamylase family protein;protein_id=WP_119834366.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1321841 1322074 . - . ID=gene-PHA56_RS06355;Name=PHA56_RS06355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS06355;old_locus_tag=PHA56_06355 NZ_CP116214.1 Protein Homology CDS 1321841 1322074 . - 0 ID=cds-WP_004132711.1;Parent=gene-PHA56_RS06355;Dbxref=Genbank:WP_004132711.1;Name=WP_004132711.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226774.1;locus_tag=PHA56_RS06355;product=hypothetical protein;protein_id=WP_004132711.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1322474 1322746 . + . ID=gene-PHA56_RS06360;Name=PHA56_RS06360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS06360;old_locus_tag=PHA56_06360 NZ_CP116214.1 Protein Homology CDS 1322474 1322746 . + 0 ID=cds-WP_016247220.1;Parent=gene-PHA56_RS06360;Dbxref=Genbank:WP_016247220.1;Name=WP_016247220.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016247220.1;locus_tag=PHA56_RS06360;product=hypothetical protein;protein_id=WP_016247220.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1322949 1323857 . + . ID=gene-PHA56_RS06365;Name=lpxP;gbkey=Gene;gene=lpxP;gene_biotype=protein_coding;locus_tag=PHA56_RS06365;old_locus_tag=PHA56_06365 NZ_CP116214.1 Protein Homology CDS 1322949 1323857 . + 0 ID=cds-WP_032938037.1;Parent=gene-PHA56_RS06365;Dbxref=Genbank:WP_032938037.1;Name=WP_032938037.1;Ontology_term=GO:0009409,GO:0036104,GO:0008951,GO:0016020;gbkey=CDS;gene=lpxP;go_component=membrane|0016020||IEA;go_function=palmitoleoyl [acyl-carrier-protein]-dependent acyltransferase activity|0008951||IEA;go_process=response to cold|0009409||IEA,Kdo2-lipid A biosynthetic process|0036104||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818633.1;locus_tag=PHA56_RS06365;product=kdo(2)-lipid IV(A) palmitoleoyltransferase;protein_id=WP_032938037.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1324631 1325104 . + . ID=gene-PHA56_RS06370;Name=PHA56_RS06370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS06370;old_locus_tag=PHA56_06370 NZ_CP116214.1 Protein Homology CDS 1324631 1325104 . + 0 ID=cds-WP_228291928.1;Parent=gene-PHA56_RS06370;Dbxref=Genbank:WP_228291928.1;Name=WP_228291928.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025025.2;locus_tag=PHA56_RS06370;product=glycosyltransferase family 2 protein;protein_id=WP_228291928.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1325180 1326408 . + . ID=gene-PHA56_RS06375;Name=PHA56_RS06375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS06375;old_locus_tag=PHA56_06375 NZ_CP116214.1 Protein Homology CDS 1325180 1325495 . + 0 ID=cds-WP_104159316.1-2;Parent=gene-PHA56_RS06375;Dbxref=Genbank:WP_104159316.1;Name=WP_104159316.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558215.1;locus_tag=PHA56_RS06375;product=IS3 family transposase;protein_id=WP_104159316.1;transl_table=11 NZ_CP116214.1 Protein Homology CDS 1325495 1326408 . + 2 ID=cds-WP_104159316.1-2;Parent=gene-PHA56_RS06375;Dbxref=Genbank:WP_104159316.1;Name=WP_104159316.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558215.1;locus_tag=PHA56_RS06375;product=IS3 family transposase;protein_id=WP_104159316.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1326393 1326956 . + . ID=gene-PHA56_RS06380;Name=PHA56_RS06380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS06380;old_locus_tag=PHA56_06380 NZ_CP116214.1 GeneMarkS-2+ CDS 1326393 1326956 . + 0 ID=cds-WP_228291929.1;Parent=gene-PHA56_RS06380;Dbxref=Genbank:WP_228291929.1;Name=WP_228291929.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PHA56_RS06380;product=hypothetical protein;protein_id=WP_228291929.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1326960 1327418 . + . ID=gene-PHA56_RS06385;Name=PHA56_RS06385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS06385;old_locus_tag=PHA56_06385 NZ_CP116214.1 GeneMarkS-2+ CDS 1326960 1327418 . + 0 ID=cds-WP_224232182.1;Parent=gene-PHA56_RS06385;Dbxref=Genbank:WP_224232182.1;Name=WP_224232182.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PHA56_RS06385;product=hypothetical protein;protein_id=WP_224232182.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1327495 1327869 . - . ID=gene-PHA56_RS06390;Name=PHA56_RS06390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS06390;old_locus_tag=PHA56_06390 NZ_CP116214.1 Protein Homology CDS 1327495 1327869 . - 0 ID=cds-WP_039077579.1;Parent=gene-PHA56_RS06390;Dbxref=Genbank:WP_039077579.1;Name=WP_039077579.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004114636.1;locus_tag=PHA56_RS06390;product=TA system toxin CbtA family protein;protein_id=WP_039077579.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1327919 1328278 . - . ID=gene-PHA56_RS06395;Name=PHA56_RS06395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS06395;old_locus_tag=PHA56_06395 NZ_CP116214.1 Protein Homology CDS 1327919 1328278 . - 0 ID=cds-WP_039077578.1;Parent=gene-PHA56_RS06395;Dbxref=Genbank:WP_039077578.1;Name=WP_039077578.1;Ontology_term=GO:0051495;gbkey=CDS;go_process=positive regulation of cytoskeleton organization|0051495||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004136886.1;locus_tag=PHA56_RS06395;product=type IV toxin-antitoxin system YeeU family antitoxin;protein_id=WP_039077578.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1328301 1328522 . - . ID=gene-PHA56_RS06400;Name=PHA56_RS06400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS06400;old_locus_tag=PHA56_06400 NZ_CP116214.1 Protein Homology CDS 1328301 1328522 . - 0 ID=cds-WP_032938028.1;Parent=gene-PHA56_RS06400;Dbxref=Genbank:WP_032938028.1;Name=WP_032938028.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588435.1;locus_tag=PHA56_RS06400;product=DUF987 domain-containing protein;protein_id=WP_032938028.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1328536 1329018 . - . ID=gene-PHA56_RS06405;Name=radC;gbkey=Gene;gene=radC;gene_biotype=protein_coding;locus_tag=PHA56_RS06405;old_locus_tag=PHA56_06405 NZ_CP116214.1 Protein Homology CDS 1328536 1329018 . - 0 ID=cds-WP_039077577.1;Parent=gene-PHA56_RS06405;Dbxref=Genbank:WP_039077577.1;Name=WP_039077577.1;Ontology_term=GO:0006281;gbkey=CDS;gene=radC;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004136890.1;locus_tag=PHA56_RS06405;product=DNA repair protein RadC;protein_id=WP_039077577.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1329259 1329738 . - . ID=gene-PHA56_RS06410;Name=PHA56_RS06410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS06410;old_locus_tag=PHA56_06410 NZ_CP116214.1 Protein Homology CDS 1329259 1329738 . - 0 ID=cds-WP_082027055.1;Parent=gene-PHA56_RS06410;Dbxref=Genbank:WP_082027055.1;Name=WP_082027055.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010434186.1;locus_tag=PHA56_RS06410;product=antirestriction protein;protein_id=WP_082027055.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1329818 1330639 . - . ID=gene-PHA56_RS06415;Name=PHA56_RS06415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS06415;old_locus_tag=PHA56_06415 NZ_CP116214.1 Protein Homology CDS 1329818 1330639 . - 0 ID=cds-WP_039077576.1;Parent=gene-PHA56_RS06415;Dbxref=Genbank:WP_039077576.1;Name=WP_039077576.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004114624.1;locus_tag=PHA56_RS06415;product=DUF932 domain-containing protein;protein_id=WP_039077576.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1330750 1330962 . - . ID=gene-PHA56_RS06420;Name=PHA56_RS06420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS06420;old_locus_tag=PHA56_06420 NZ_CP116214.1 Protein Homology CDS 1330750 1330962 . - 0 ID=cds-WP_032938024.1;Parent=gene-PHA56_RS06420;Dbxref=Genbank:WP_032938024.1;Name=WP_032938024.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004114623.1;locus_tag=PHA56_RS06420;product=hypothetical protein;protein_id=WP_032938024.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1331072 1331545 . - . ID=gene-PHA56_RS06425;Name=PHA56_RS06425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS06425;old_locus_tag=PHA56_06425 NZ_CP116214.1 Protein Homology CDS 1331072 1331545 . - 0 ID=cds-WP_032938022.1;Parent=gene-PHA56_RS06425;Dbxref=Genbank:WP_032938022.1;Name=WP_032938022.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004265046.1;locus_tag=PHA56_RS06425;product=hypothetical protein;protein_id=WP_032938022.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1331619 1332248 . - . ID=gene-PHA56_RS06430;Name=PHA56_RS06430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS06430;old_locus_tag=PHA56_06430 NZ_CP116214.1 GeneMarkS-2+ CDS 1331619 1332248 . - 0 ID=cds-WP_039077575.1;Parent=gene-PHA56_RS06430;Dbxref=Genbank:WP_039077575.1;Name=WP_039077575.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PHA56_RS06430;product=hypothetical protein;protein_id=WP_039077575.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1332346 1333023 . - . ID=gene-PHA56_RS06435;Name=PHA56_RS06435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS06435;old_locus_tag=PHA56_06435 NZ_CP116214.1 Protein Homology CDS 1332346 1333023 . - 0 ID=cds-WP_039077574.1;Parent=gene-PHA56_RS06435;Dbxref=Genbank:WP_039077574.1;Name=WP_039077574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004139645.1;locus_tag=PHA56_RS06435;product=WYL domain-containing protein;protein_id=WP_039077574.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1333079 1333807 . - . ID=gene-PHA56_RS06440;Name=PHA56_RS06440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS06440;old_locus_tag=PHA56_06440 NZ_CP116214.1 Protein Homology CDS 1333079 1333807 . - 0 ID=cds-WP_039077573.1;Parent=gene-PHA56_RS06440;Dbxref=Genbank:WP_039077573.1;Name=WP_039077573.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004139644.1;locus_tag=PHA56_RS06440;product=DUF3944 domain-containing protein;protein_id=WP_039077573.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1334394 1335557 . - . ID=gene-PHA56_RS06445;Name=PHA56_RS06445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS06445;old_locus_tag=PHA56_06445 NZ_CP116214.1 Protein Homology CDS 1334394 1335557 . - 0 ID=cds-WP_224232184.1;Parent=gene-PHA56_RS06445;Dbxref=Genbank:WP_224232184.1;Name=WP_224232184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004114620.1;locus_tag=PHA56_RS06445;product=hypothetical protein;protein_id=WP_224232184.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1335749 1335973 . - . ID=gene-PHA56_RS06450;Name=PHA56_RS06450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS06450;old_locus_tag=PHA56_06450 NZ_CP116214.1 Protein Homology CDS 1335749 1335973 . - 0 ID=cds-WP_032938002.1;Parent=gene-PHA56_RS06450;Dbxref=Genbank:WP_032938002.1;Name=WP_032938002.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004104661.1;locus_tag=PHA56_RS06450;product=AlpA family phage regulatory protein;protein_id=WP_032938002.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1336289 1337035 . + . ID=gene-PHA56_RS06455;Name=PHA56_RS06455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS06455;old_locus_tag=PHA56_06455 NZ_CP116214.1 Protein Homology CDS 1336289 1337035 . + 0 ID=cds-WP_032938000.1;Parent=gene-PHA56_RS06455;Dbxref=Genbank:WP_032938000.1;Name=WP_032938000.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004114617.1;locus_tag=PHA56_RS06455;product=hypothetical protein;protein_id=WP_032938000.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1337362 1338015 . + . ID=gene-PHA56_RS06460;Name=PHA56_RS06460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS06460;old_locus_tag=PHA56_06460 NZ_CP116214.1 Protein Homology CDS 1337362 1338015 . + 0 ID=cds-WP_032937998.1;Parent=gene-PHA56_RS06460;Dbxref=Genbank:WP_032937998.1;Name=WP_032937998.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004139312.1;locus_tag=PHA56_RS06460;product=TetR/AcrR family transcriptional regulator;protein_id=WP_032937998.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1338088 1339071 . - . ID=gene-PHA56_RS06465;Name=PHA56_RS06465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS06465;old_locus_tag=PHA56_06465 NZ_CP116214.1 Protein Homology CDS 1338088 1339071 . - 0 ID=cds-WP_032938122.1;Parent=gene-PHA56_RS06465;Dbxref=Genbank:WP_032938122.1;Name=WP_032938122.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001724254.1;locus_tag=PHA56_RS06465;product=oxidoreductase;protein_id=WP_032938122.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1339704 1340138 . - . ID=gene-PHA56_RS06470;Name=PHA56_RS06470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS06470;old_locus_tag=PHA56_06470 NZ_CP116214.1 Protein Homology CDS 1339704 1340138 . - 0 ID=cds-WP_196560033.1;Parent=gene-PHA56_RS06470;Dbxref=Genbank:WP_196560033.1;Name=WP_196560033.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229935.1;locus_tag=PHA56_RS06470;product=helix-turn-helix domain-containing protein;protein_id=WP_196560033.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1340210 1341163 . + . ID=gene-PHA56_RS06475;Name=PHA56_RS06475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS06475;old_locus_tag=PHA56_06475 NZ_CP116214.1 Protein Homology CDS 1340210 1341163 . + 0 ID=cds-WP_032937994.1;Parent=gene-PHA56_RS06475;Dbxref=Genbank:WP_032937994.1;Name=WP_032937994.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012540026.1;locus_tag=PHA56_RS06475;product=aromatic alcohol reductase;protein_id=WP_032937994.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1341489 1341824 . + . ID=gene-PHA56_RS06480;Name=PHA56_RS06480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS06480;old_locus_tag=PHA56_06480 NZ_CP116214.1 Protein Homology CDS 1341489 1341824 . + 0 ID=cds-WP_032937991.1;Parent=gene-PHA56_RS06480;Dbxref=Genbank:WP_032937991.1;Name=WP_032937991.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001301033.1;locus_tag=PHA56_RS06480;product=FlxA-like family protein;protein_id=WP_032937991.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1342069 1342536 . - . ID=gene-PHA56_RS06485;Name=PHA56_RS06485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS06485;old_locus_tag=PHA56_06485 NZ_CP116214.1 Protein Homology CDS 1342069 1342536 . - 0 ID=cds-WP_032937984.1;Parent=gene-PHA56_RS06485;Dbxref=Genbank:WP_032937984.1;Name=WP_032937984.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004136855.1;locus_tag=PHA56_RS06485;product=DMT family transporter;protein_id=WP_032937984.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1342551 1343951 . - . ID=gene-PHA56_RS06490;Name=PHA56_RS06490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS06490;old_locus_tag=PHA56_06490 NZ_CP116214.1 Protein Homology CDS 1342551 1343951 . - 0 ID=cds-WP_032937983.1;Parent=gene-PHA56_RS06490;Dbxref=Genbank:WP_032937983.1;Name=WP_032937983.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229932.1;locus_tag=PHA56_RS06490;product=amidohydrolase family protein;protein_id=WP_032937983.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1344096 1344986 . + . ID=gene-PHA56_RS06495;Name=PHA56_RS06495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS06495;old_locus_tag=PHA56_06495 NZ_CP116214.1 Protein Homology CDS 1344096 1344986 . + 0 ID=cds-WP_032937982.1;Parent=gene-PHA56_RS06495;Dbxref=Genbank:WP_032937982.1;Name=WP_032937982.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013204490.1;locus_tag=PHA56_RS06495;product=LysR family transcriptional regulator;protein_id=WP_032937982.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1345128 1345709 . - . ID=gene-PHA56_RS06500;Name=PHA56_RS06500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS06500;old_locus_tag=PHA56_06500 NZ_CP116214.1 Protein Homology CDS 1345128 1345709 . - 0 ID=cds-WP_032937979.1;Parent=gene-PHA56_RS06500;Dbxref=Genbank:WP_032937979.1;Name=WP_032937979.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014605033.1;locus_tag=PHA56_RS06500;product=NAD(P)H-dependent oxidoreductase;protein_id=WP_032937979.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1345781 1346971 . - . ID=gene-PHA56_RS06505;Name=PHA56_RS06505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS06505;old_locus_tag=PHA56_06505 NZ_CP116214.1 Protein Homology CDS 1345781 1346971 . - 0 ID=cds-WP_032937978.1;Parent=gene-PHA56_RS06505;Dbxref=Genbank:WP_032937978.1;Name=WP_032937978.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004958545.1;locus_tag=PHA56_RS06505;product=MFS transporter;protein_id=WP_032937978.1;transl_table=11 NZ_CP116214.1 RefSeq pseudogene 1347169 1347270 . + . ID=gene-PHA56_RS06510;Name=PHA56_RS06510;end_range=1347270,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS06510;old_locus_tag=PHA56_06510;partial=true;pseudo=true NZ_CP116214.1 Protein Homology CDS 1347169 1347270 . + 0 ID=cds-PHA56_RS06510;Parent=gene-PHA56_RS06510;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1347270,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014376.2;locus_tag=PHA56_RS06510;partial=true;product=AraC family transcriptional regulator;pseudo=true;transl_table=11 NZ_CP116214.1 RefSeq gene 1347361 1347852 . + . ID=gene-PHA56_RS06515;Name=PHA56_RS06515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS06515;old_locus_tag=PHA56_06515 NZ_CP116214.1 Protein Homology CDS 1347361 1347852 . + 0 ID=cds-WP_223226961.1;Parent=gene-PHA56_RS06515;Dbxref=Genbank:WP_223226961.1;Name=WP_223226961.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024242.2;locus_tag=PHA56_RS06515;product=AraC family transcriptional regulator;protein_id=WP_223226961.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1348252 1349493 . - . ID=gene-PHA56_RS06520;Name=PHA56_RS06520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS06520;old_locus_tag=PHA56_06520 NZ_CP116214.1 Protein Homology CDS 1348252 1349493 . - 0 ID=cds-WP_039077571.1;Parent=gene-PHA56_RS06520;Dbxref=Genbank:WP_039077571.1;Name=WP_039077571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708468.1;locus_tag=PHA56_RS06520;product=integrase;protein_id=WP_039077571.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1349698 1350061 . - . ID=gene-PHA56_RS06525;Name=ssrA;gbkey=Gene;gene=ssrA;gene_biotype=tmRNA;locus_tag=PHA56_RS06525;old_locus_tag=PHA56_06525 NZ_CP116214.1 cmsearch tmRNA 1349698 1350061 . - . ID=rna-PHA56_RS06525;Parent=gene-PHA56_RS06525;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA56_RS06525;product=transfer-messenger RNA NZ_CP116214.1 cmsearch exon 1349698 1350061 . - . ID=exon-PHA56_RS06525-1;Parent=rna-PHA56_RS06525;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA56_RS06525;product=transfer-messenger RNA NZ_CP116214.1 RefSeq gene 1350206 1350688 . - . ID=gene-PHA56_RS06530;Name=smpB;gbkey=Gene;gene=smpB;gene_biotype=protein_coding;locus_tag=PHA56_RS06530;old_locus_tag=PHA56_06530 NZ_CP116214.1 Protein Homology CDS 1350206 1350688 . - 0 ID=cds-WP_004104655.1;Parent=gene-PHA56_RS06530;Dbxref=Genbank:WP_004104655.1;Name=WP_004104655.1;Ontology_term=GO:0003723;gbkey=CDS;gene=smpB;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228361.1;locus_tag=PHA56_RS06530;product=SsrA-binding protein SmpB;protein_id=WP_004104655.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1350838 1351275 . + . ID=gene-PHA56_RS06535;Name=PHA56_RS06535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS06535;old_locus_tag=PHA56_06535 NZ_CP116214.1 Protein Homology CDS 1350838 1351275 . + 0 ID=cds-WP_004123817.1;Parent=gene-PHA56_RS06535;Dbxref=Genbank:WP_004123817.1;Name=WP_004123817.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015963348.1;locus_tag=PHA56_RS06535;product=type II toxin-antitoxin system RatA family toxin;protein_id=WP_004123817.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1351265 1351555 . + . ID=gene-PHA56_RS06540;Name=PHA56_RS06540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS06540;old_locus_tag=PHA56_06540 NZ_CP116214.1 Protein Homology CDS 1351265 1351555 . + 0 ID=cds-WP_014226445.1;Parent=gene-PHA56_RS06540;Dbxref=Genbank:WP_014226445.1;Name=WP_014226445.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228359.1;locus_tag=PHA56_RS06540;product=RnfH family protein;protein_id=WP_014226445.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1351622 1351963 . - . ID=gene-PHA56_RS06545;Name=bamE;gbkey=Gene;gene=bamE;gene_biotype=protein_coding;locus_tag=PHA56_RS06545;old_locus_tag=PHA56_06545 NZ_CP116214.1 Protein Homology CDS 1351622 1351963 . - 0 ID=cds-WP_004123807.1;Parent=gene-PHA56_RS06545;Dbxref=Genbank:WP_004123807.1;Name=WP_004123807.1;gbkey=CDS;gene=bamE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228358.1;locus_tag=PHA56_RS06545;product=outer membrane protein assembly factor BamE;protein_id=WP_004123807.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1352111 1353772 . - . ID=gene-PHA56_RS06550;Name=recN;gbkey=Gene;gene=recN;gene_biotype=protein_coding;locus_tag=PHA56_RS06550;old_locus_tag=PHA56_06550 NZ_CP116214.1 Protein Homology CDS 1352111 1353772 . - 0 ID=cds-WP_014839242.1;Parent=gene-PHA56_RS06550;Dbxref=Genbank:WP_014839242.1;Name=WP_014839242.1;Ontology_term=GO:0006281,GO:0006310,GO:0005524;gbkey=CDS;gene=recN;go_function=ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228356.1;locus_tag=PHA56_RS06550;product=DNA repair protein RecN;protein_id=WP_014839242.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1353859 1354737 . - . ID=gene-PHA56_RS06555;Name=nadK;gbkey=Gene;gene=nadK;gene_biotype=protein_coding;locus_tag=PHA56_RS06555;old_locus_tag=PHA56_06555 NZ_CP116214.1 Protein Homology CDS 1353859 1354737 . - 0 ID=cds-WP_004123797.1;Parent=gene-PHA56_RS06555;Dbxref=Genbank:WP_004123797.1;Name=WP_004123797.1;Ontology_term=GO:0003951;gbkey=CDS;gene=nadK;go_function=NAD+ kinase activity|0003951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020239499.1;locus_tag=PHA56_RS06555;product=NAD(+) kinase;protein_id=WP_004123797.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1354863 1355453 . + . ID=gene-PHA56_RS06560;Name=grpE;gbkey=Gene;gene=grpE;gene_biotype=protein_coding;locus_tag=PHA56_RS06560;old_locus_tag=PHA56_06560 NZ_CP116214.1 Protein Homology CDS 1354863 1355453 . + 0 ID=cds-WP_004853330.1;Parent=gene-PHA56_RS06560;Dbxref=Genbank:WP_004853330.1;Name=WP_004853330.1;gbkey=CDS;gene=grpE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228354.1;locus_tag=PHA56_RS06560;product=nucleotide exchange factor GrpE;protein_id=WP_004853330.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1355518 1356807 . - . ID=gene-PHA56_RS06565;Name=PHA56_RS06565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS06565;old_locus_tag=PHA56_06565 NZ_CP116214.1 Protein Homology CDS 1355518 1356807 . - 0 ID=cds-WP_014839241.1;Parent=gene-PHA56_RS06565;Dbxref=Genbank:WP_014839241.1;Name=WP_014839241.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004123790.1;locus_tag=PHA56_RS06565;product=HlyC/CorC family transporter;protein_id=WP_014839241.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1356826 1357617 . - . ID=gene-PHA56_RS06570;Name=PHA56_RS06570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS06570;old_locus_tag=PHA56_06570 NZ_CP116214.1 Protein Homology CDS 1356826 1357617 . - 0 ID=cds-WP_004853326.1;Parent=gene-PHA56_RS06570;Dbxref=Genbank:WP_004853326.1;Name=WP_004853326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228349.1;locus_tag=PHA56_RS06570;product=inner membrane protein YpjD;protein_id=WP_004853326.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1357782 1359149 . + . ID=gene-PHA56_RS06575;Name=ffh;gbkey=Gene;gene=ffh;gene_biotype=protein_coding;locus_tag=PHA56_RS06575;old_locus_tag=PHA56_06575 NZ_CP116214.1 Protein Homology CDS 1357782 1359149 . + 0 ID=cds-WP_004123779.1;Parent=gene-PHA56_RS06575;Dbxref=Genbank:WP_004123779.1;Name=WP_004123779.1;Ontology_term=GO:0009306,GO:0003924,GO:0005048,GO:0048501;gbkey=CDS;gene=ffh;go_component=signal recognition particle%2C plasma membrane targeting|0048501||IEA;go_function=GTPase activity|0003924||IEA,signal sequence binding|0005048||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004104641.1;locus_tag=PHA56_RS06575;product=signal recognition particle protein;protein_id=WP_004123779.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1359386 1359634 . + . ID=gene-PHA56_RS06580;Name=rpsP;gbkey=Gene;gene=rpsP;gene_biotype=protein_coding;locus_tag=PHA56_RS06580;old_locus_tag=PHA56_06580 NZ_CP116214.1 Protein Homology CDS 1359386 1359634 . + 0 ID=cds-WP_004123777.1;Parent=gene-PHA56_RS06580;Dbxref=Genbank:WP_004123777.1;Name=WP_004123777.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsP;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000256453.1;locus_tag=PHA56_RS06580;product=30S ribosomal protein S16;protein_id=WP_004123777.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1359653 1360201 . + . ID=gene-PHA56_RS06585;Name=rimM;gbkey=Gene;gene=rimM;gene_biotype=protein_coding;locus_tag=PHA56_RS06585;old_locus_tag=PHA56_06585 NZ_CP116214.1 Protein Homology CDS 1359653 1360201 . + 0 ID=cds-WP_014226441.1;Parent=gene-PHA56_RS06585;Dbxref=Genbank:WP_014226441.1;Name=WP_014226441.1;Note=Essential for efficient processing of 16S rRNA;Ontology_term=GO:0006364,GO:0003723;gbkey=CDS;gene=rimM;go_function=RNA binding|0003723||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000043333.1;locus_tag=PHA56_RS06585;product=ribosome maturation factor RimM;protein_id=WP_014226441.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1360247 1361014 . + . ID=gene-PHA56_RS06590;Name=trmD;gbkey=Gene;gene=trmD;gene_biotype=protein_coding;locus_tag=PHA56_RS06590;old_locus_tag=PHA56_06590 NZ_CP116214.1 Protein Homology CDS 1360247 1361014 . + 0 ID=cds-WP_004104636.1;Parent=gene-PHA56_RS06590;Dbxref=Genbank:WP_004104636.1;Name=WP_004104636.1;Ontology_term=GO:0006400,GO:0009019;gbkey=CDS;gene=trmD;go_function=tRNA (guanine-N1-)-methyltransferase activity|0009019||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461604.1;locus_tag=PHA56_RS06590;product=tRNA (guanosine(37)-N1)-methyltransferase TrmD;protein_id=WP_004104636.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1361054 1361401 . + . ID=gene-PHA56_RS06595;Name=rplS;gbkey=Gene;gene=rplS;gene_biotype=protein_coding;locus_tag=PHA56_RS06595;old_locus_tag=PHA56_06595 NZ_CP116214.1 Protein Homology CDS 1361054 1361401 . + 0 ID=cds-WP_004104634.1;Parent=gene-PHA56_RS06595;Dbxref=Genbank:WP_004104634.1;Name=WP_004104634.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplS;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012768745.1;locus_tag=PHA56_RS06595;product=50S ribosomal protein L19;protein_id=WP_004104634.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1361522 1361959 . + . ID=gene-PHA56_RS06600;Name=PHA56_RS06600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS06600;old_locus_tag=PHA56_06600 NZ_CP116214.1 Protein Homology CDS 1361522 1361959 . + 0 ID=cds-WP_014839240.1;Parent=gene-PHA56_RS06600;Dbxref=Genbank:WP_014839240.1;Name=WP_014839240.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004853320.1;locus_tag=PHA56_RS06600;product=DUF2946 domain-containing protein;protein_id=WP_014839240.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1362014 1363384 . + . ID=gene-PHA56_RS06605;Name=PHA56_RS06605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS06605;old_locus_tag=PHA56_06605 NZ_CP116214.1 Protein Homology CDS 1362014 1363384 . + 0 ID=cds-WP_032720460.1;Parent=gene-PHA56_RS06605;Dbxref=Genbank:WP_032720460.1;Name=WP_032720460.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004853317.1;locus_tag=PHA56_RS06605;product=PepSY-associated TM helix domain-containing protein;protein_id=WP_032720460.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1363389 1363871 . - . ID=gene-PHA56_RS06610;Name=PHA56_RS06610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS06610;old_locus_tag=PHA56_06610 NZ_CP116214.1 Protein Homology CDS 1363389 1363871 . - 0 ID=cds-WP_014226437.1;Parent=gene-PHA56_RS06610;Dbxref=Genbank:WP_014226437.1;Name=WP_014226437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228296.1;locus_tag=PHA56_RS06610;product=OmpA family protein;protein_id=WP_014226437.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1363883 1365106 . - . ID=gene-PHA56_RS06615;Name=dgcN;gbkey=Gene;gene=dgcN;gene_biotype=protein_coding;locus_tag=PHA56_RS06615;old_locus_tag=PHA56_06615 NZ_CP116214.1 Protein Homology CDS 1363883 1365106 . - 0 ID=cds-WP_014839238.1;Parent=gene-PHA56_RS06615;Dbxref=Genbank:WP_014839238.1;Name=WP_014839238.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;gene=dgcN;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228295.1;locus_tag=PHA56_RS06615;product=diguanylate cyclase DgcN;protein_id=WP_014839238.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1365099 1365608 . - . ID=gene-PHA56_RS06620;Name=PHA56_RS06620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS06620;old_locus_tag=PHA56_06620 NZ_CP116214.1 Protein Homology CDS 1365099 1365608 . - 0 ID=cds-WP_004853313.1;Parent=gene-PHA56_RS06620;Dbxref=Genbank:WP_004853313.1;Name=WP_004853313.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228294.1;locus_tag=PHA56_RS06620;product=YfiR family protein;protein_id=WP_004853313.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1365953 1367023 . + . ID=gene-PHA56_RS06625;Name=aroF;gbkey=Gene;gene=aroF;gene_biotype=protein_coding;locus_tag=PHA56_RS06625;old_locus_tag=PHA56_06625 NZ_CP116214.1 Protein Homology CDS 1365953 1367023 . + 0 ID=cds-WP_014226435.1;Parent=gene-PHA56_RS06625;Dbxref=Genbank:WP_014226435.1;Name=WP_014226435.1;gbkey=CDS;gene=aroF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311491.1;locus_tag=PHA56_RS06625;product=3-deoxy-7-phosphoheptulonate synthase AroF;protein_id=WP_014226435.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1367033 1368154 . + . ID=gene-PHA56_RS06630;Name=tyrA;gbkey=Gene;gene=tyrA;gene_biotype=protein_coding;locus_tag=PHA56_RS06630;old_locus_tag=PHA56_06630 NZ_CP116214.1 Protein Homology CDS 1367033 1368154 . + 0 ID=cds-WP_014226434.1;Parent=gene-PHA56_RS06630;Dbxref=Genbank:WP_014226434.1;Name=WP_014226434.1;Ontology_term=GO:0006571,GO:0046417,GO:0004106,GO:0004665,GO:0008977;gbkey=CDS;gene=tyrA;go_function=chorismate mutase activity|0004106||IEA,prephenate dehydrogenase (NADP+) activity|0004665||IEA,prephenate dehydrogenase (NAD+) activity|0008977||IEA;go_process=tyrosine biosynthetic process|0006571||IEA,chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228292.1;locus_tag=PHA56_RS06630;product=bifunctional chorismate mutase/prephenate dehydrogenase;protein_id=WP_014226434.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1368223 1369095 . + . ID=gene-PHA56_RS06635;Name=PHA56_RS06635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS06635;old_locus_tag=PHA56_06635 NZ_CP116214.1 Protein Homology CDS 1368223 1369095 . + 0 ID=cds-WP_014226433.1;Parent=gene-PHA56_RS06635;Dbxref=Genbank:WP_014226433.1;Name=WP_014226433.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014839236.1;locus_tag=PHA56_RS06635;product=SMP-30/gluconolactonase/LRE family protein;protein_id=WP_014226433.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1369092 1370252 . - . ID=gene-PHA56_RS06640;Name=pheA;gbkey=Gene;gene=pheA;gene_biotype=protein_coding;locus_tag=PHA56_RS06640;old_locus_tag=PHA56_06640 NZ_CP116214.1 Protein Homology CDS 1369092 1370252 . - 0 ID=cds-WP_004853306.1;Parent=gene-PHA56_RS06640;Dbxref=Genbank:WP_004853306.1;Name=WP_004853306.1;Ontology_term=GO:0009094,GO:0046417,GO:0004106,GO:0004664;gbkey=CDS;gene=pheA;go_function=chorismate mutase activity|0004106||IEA,prephenate dehydratase activity|0004664||IEA;go_process=L-phenylalanine biosynthetic process|0009094||IEA,chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228290.1;locus_tag=PHA56_RS06640;product=bifunctional chorismate mutase/prephenate dehydratase;protein_id=WP_004853306.1;transl_table=11 NZ_CP116214.1 cmsearch sequence_feature 1370283 1370407 . - . ID=id-NZ_CP116214.1:1370283..1370407;Dbxref=RFAM:RF01859;Note=Phe leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.1 NZ_CP116214.1 RefSeq gene 1370359 1370406 . - . ID=gene-PHA56_RS06645;Name=pheL;gbkey=Gene;gene=pheL;gene_biotype=protein_coding;locus_tag=PHA56_RS06645;old_locus_tag=PHA56_06645 NZ_CP116214.1 Protein Homology CDS 1370359 1370406 . - 0 ID=cds-WP_101706155.1;Parent=gene-PHA56_RS06645;Dbxref=Genbank:WP_101706155.1;Name=WP_101706155.1;gbkey=CDS;gene=pheL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417089.1;locus_tag=PHA56_RS06645;product=pheA operon leader peptide PheL;protein_id=WP_101706155.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1370514 1370849 . - . ID=gene-PHA56_RS06650;Name=raiA;gbkey=Gene;gene=raiA;gene_biotype=protein_coding;locus_tag=PHA56_RS06650;old_locus_tag=PHA56_06650 NZ_CP116214.1 Protein Homology CDS 1370514 1370849 . - 0 ID=cds-WP_004104616.1;Parent=gene-PHA56_RS06650;Dbxref=Genbank:WP_004104616.1;Name=WP_004104616.1;gbkey=CDS;gene=raiA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228289.1;locus_tag=PHA56_RS06650;product=ribosome-associated translation inhibitor RaiA;protein_id=WP_004104616.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1371121 1371858 . - . ID=gene-PHA56_RS06655;Name=bamD;gbkey=Gene;gene=bamD;gene_biotype=protein_coding;locus_tag=PHA56_RS06655;old_locus_tag=PHA56_06655 NZ_CP116214.1 Protein Homology CDS 1371121 1371858 . - 0 ID=cds-WP_004853303.1;Parent=gene-PHA56_RS06655;Dbxref=Genbank:WP_004853303.1;Name=WP_004853303.1;gbkey=CDS;gene=bamD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228288.1;locus_tag=PHA56_RS06655;product=outer membrane protein assembly factor BamD;protein_id=WP_004853303.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1371991 1372971 . + . ID=gene-PHA56_RS06660;Name=rluD;gbkey=Gene;gene=rluD;gene_biotype=protein_coding;locus_tag=PHA56_RS06660;old_locus_tag=PHA56_06660 NZ_CP116214.1 Protein Homology CDS 1371991 1372971 . + 0 ID=cds-WP_004853302.1;Parent=gene-PHA56_RS06660;Dbxref=Genbank:WP_004853302.1;Name=WP_004853302.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=rluD;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017383977.1;locus_tag=PHA56_RS06660;product=23S rRNA pseudouridine(1911/1915/1917) synthase RluD;protein_id=WP_004853302.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1372968 1373699 . + . ID=gene-PHA56_RS06665;Name=yfiH;gbkey=Gene;gene=yfiH;gene_biotype=protein_coding;locus_tag=PHA56_RS06665;old_locus_tag=PHA56_06665 NZ_CP116214.1 Protein Homology CDS 1372968 1373699 . + 0 ID=cds-WP_032720461.1;Parent=gene-PHA56_RS06665;Dbxref=Genbank:WP_032720461.1;Name=WP_032720461.1;Ontology_term=GO:0004000,GO:0004731,GO:0042803;gbkey=CDS;gene=yfiH;go_function=adenosine deaminase activity|0004000||IEA,purine-nucleoside phosphorylase activity|0004731||IEA,protein homodimerization activity|0042803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004899919.1;locus_tag=PHA56_RS06665;product=purine nucleoside phosphorylase YfiH;protein_id=WP_032720461.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1373827 1376400 . + . ID=gene-PHA56_RS06670;Name=clpB;gbkey=Gene;gene=clpB;gene_biotype=protein_coding;locus_tag=PHA56_RS06670;old_locus_tag=PHA56_06670 NZ_CP116214.1 Protein Homology CDS 1373827 1376400 . + 0 ID=cds-WP_014226431.1;Parent=gene-PHA56_RS06670;Dbxref=Genbank:WP_014226431.1;Name=WP_014226431.1;Ontology_term=GO:0009408,GO:0042026,GO:0005524,GO:0016887;gbkey=CDS;gene=clpB;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=response to heat|0009408||IEA,protein refolding|0042026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002461515.1;locus_tag=PHA56_RS06670;product=ATP-dependent chaperone ClpB;protein_id=WP_014226431.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1376854 1378393 . + . ID=gene-PHA56_RS06675;Name=PHA56_RS06675;gbkey=Gene;gene_biotype=rRNA;locus_tag=PHA56_RS06675;old_locus_tag=PHA56_06675 NZ_CP116214.1 cmsearch rRNA 1376854 1378393 . + . ID=rna-PHA56_RS06675;Parent=gene-PHA56_RS06675;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA56_RS06675;product=16S ribosomal RNA NZ_CP116214.1 cmsearch exon 1376854 1378393 . + . ID=exon-PHA56_RS06675-1;Parent=rna-PHA56_RS06675;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA56_RS06675;product=16S ribosomal RNA NZ_CP116214.1 RefSeq gene 1378481 1378555 . + . ID=gene-PHA56_RS06680;Name=PHA56_RS06680;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA56_RS06680;old_locus_tag=PHA56_06680 NZ_CP116214.1 tRNAscan-SE tRNA 1378481 1378555 . + . ID=rna-PHA56_RS06680;Parent=gene-PHA56_RS06680;anticodon=(pos:1378514..1378516);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS06680;product=tRNA-Glu NZ_CP116214.1 tRNAscan-SE exon 1378481 1378555 . + . ID=exon-PHA56_RS06680-1;Parent=rna-PHA56_RS06680;anticodon=(pos:1378514..1378516);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS06680;product=tRNA-Glu NZ_CP116214.1 RefSeq gene 1378746 1381651 . + . ID=gene-PHA56_RS06685;Name=PHA56_RS06685;gbkey=Gene;gene_biotype=rRNA;locus_tag=PHA56_RS06685;old_locus_tag=PHA56_06685 NZ_CP116214.1 cmsearch rRNA 1378746 1381651 . + . ID=rna-PHA56_RS06685;Parent=gene-PHA56_RS06685;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA56_RS06685;product=23S ribosomal RNA NZ_CP116214.1 cmsearch exon 1378746 1381651 . + . ID=exon-PHA56_RS06685-1;Parent=rna-PHA56_RS06685;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA56_RS06685;product=23S ribosomal RNA NZ_CP116214.1 RefSeq gene 1381853 1381968 . + . ID=gene-PHA56_RS06690;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=PHA56_RS06690;old_locus_tag=PHA56_06690 NZ_CP116214.1 cmsearch rRNA 1381853 1381968 . + . ID=rna-PHA56_RS06690;Parent=gene-PHA56_RS06690;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA56_RS06690;product=5S ribosomal RNA NZ_CP116214.1 cmsearch exon 1381853 1381968 . + . ID=exon-PHA56_RS06690-1;Parent=rna-PHA56_RS06690;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA56_RS06690;product=5S ribosomal RNA NZ_CP116214.1 RefSeq gene 1382228 1382683 . + . ID=gene-PHA56_RS06695;Name=PHA56_RS06695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS06695;old_locus_tag=PHA56_06695 NZ_CP116214.1 Protein Homology CDS 1382228 1382683 . + 0 ID=cds-WP_032721880.1;Parent=gene-PHA56_RS06695;Dbxref=Genbank:WP_032721880.1;Name=WP_032721880.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461590.1;locus_tag=PHA56_RS06695;product=DUF4385 domain-containing protein;protein_id=WP_032721880.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1382957 1384255 . + . ID=gene-PHA56_RS06700;Name=PHA56_RS06700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS06700;old_locus_tag=PHA56_06700 NZ_CP116214.1 Protein Homology CDS 1382957 1384255 . + 0 ID=cds-WP_038424788.1;Parent=gene-PHA56_RS06700;Dbxref=Genbank:WP_038424788.1;Name=WP_038424788.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228282.1;locus_tag=PHA56_RS06700;product=MFS transporter;protein_id=WP_038424788.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1384258 1384584 . - . ID=gene-PHA56_RS06705;Name=PHA56_RS06705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS06705;old_locus_tag=PHA56_06705 NZ_CP116214.1 Protein Homology CDS 1384258 1384584 . - 0 ID=cds-WP_038424787.1;Parent=gene-PHA56_RS06705;Dbxref=Genbank:WP_038424787.1;Name=WP_038424787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228281.1;locus_tag=PHA56_RS06705;product=YfiM family lipoprotein;protein_id=WP_038424787.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1384624 1385979 . - . ID=gene-PHA56_RS06710;Name=pssA;gbkey=Gene;gene=pssA;gene_biotype=protein_coding;locus_tag=PHA56_RS06710;old_locus_tag=PHA56_06710 NZ_CP116214.1 Protein Homology CDS 1384624 1385979 . - 0 ID=cds-WP_014230410.1;Parent=gene-PHA56_RS06710;Dbxref=Genbank:WP_014230410.1;Name=WP_014230410.1;Ontology_term=GO:0032049,GO:0008444;gbkey=CDS;gene=pssA;go_function=CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity|0008444||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121216.1;locus_tag=PHA56_RS06710;product=CDP-diacylglycerol--serine O-phosphatidyltransferase;protein_id=WP_014230410.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1386073 1388751 . - . ID=gene-PHA56_RS06715;Name=pat;gbkey=Gene;gene=pat;gene_biotype=protein_coding;locus_tag=PHA56_RS06715;old_locus_tag=PHA56_06715 NZ_CP116214.1 Protein Homology CDS 1386073 1388751 . - 0 ID=cds-WP_038424785.1;Parent=gene-PHA56_RS06715;Dbxref=Genbank:WP_038424785.1;Name=WP_038424785.1;gbkey=CDS;gene=pat;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004104601.1;locus_tag=PHA56_RS06715;product=protein lysine acetyltransferase;protein_id=WP_038424785.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1388787 1389485 . - . ID=gene-PHA56_RS06720;Name=PHA56_RS06720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS06720;old_locus_tag=PHA56_06720 NZ_CP116214.1 Protein Homology CDS 1388787 1389485 . - 0 ID=cds-WP_014839228.1;Parent=gene-PHA56_RS06720;Dbxref=Genbank:WP_014839228.1;Name=WP_014839228.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228278.1;locus_tag=PHA56_RS06720;product=DTW domain-containing protein;protein_id=WP_014839228.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1389555 1389980 . - . ID=gene-PHA56_RS06725;Name=trxC;gbkey=Gene;gene=trxC;gene_biotype=protein_coding;locus_tag=PHA56_RS06725;old_locus_tag=PHA56_06725 NZ_CP116214.1 Protein Homology CDS 1389555 1389980 . - 0 ID=cds-WP_004104599.1;Parent=gene-PHA56_RS06725;Dbxref=Genbank:WP_004104599.1;Name=WP_004104599.1;Ontology_term=GO:0006662,GO:0015035;gbkey=CDS;gene=trxC;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=glycerol ether metabolic process|0006662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228277.1;locus_tag=PHA56_RS06725;product=thioredoxin TrxC;protein_id=WP_004104599.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1390184 1391257 . + . ID=gene-PHA56_RS06730;Name=PHA56_RS06730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS06730;old_locus_tag=PHA56_06730 NZ_CP116214.1 Protein Homology CDS 1390184 1391257 . + 0 ID=cds-WP_004123719.1;Parent=gene-PHA56_RS06730;Dbxref=Genbank:WP_004123719.1;Name=WP_004123719.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004123719.1;locus_tag=PHA56_RS06730;product=tRNA/rRNA methyltransferase;protein_id=WP_004123719.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1391308 1392636 . - . ID=gene-PHA56_RS06735;Name=PHA56_RS06735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS06735;old_locus_tag=PHA56_06735 NZ_CP116214.1 Protein Homology CDS 1391308 1392636 . - 0 ID=cds-WP_038424783.1;Parent=gene-PHA56_RS06735;Dbxref=Genbank:WP_038424783.1;Name=WP_038424783.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000547191.1;locus_tag=PHA56_RS06735;product=IS4 family transposase;protein_id=WP_038424783.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1392751 1393440 . - . ID=gene-PHA56_RS06740;Name=ung;gbkey=Gene;gene=ung;gene_biotype=protein_coding;locus_tag=PHA56_RS06740;old_locus_tag=PHA56_06740 NZ_CP116214.1 Protein Homology CDS 1392751 1393440 . - 0 ID=cds-WP_014230405.1;Parent=gene-PHA56_RS06740;Dbxref=Genbank:WP_014230405.1;Name=WP_014230405.1;Ontology_term=GO:0006284,GO:0004844,GO:0016799;gbkey=CDS;gene=ung;go_function=uracil DNA N-glycosylase activity|0004844||IEA,hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228275.1;locus_tag=PHA56_RS06740;product=uracil-DNA glycosylase;protein_id=WP_014230405.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1393752 1394135 . + . ID=gene-PHA56_RS06745;Name=grcA;gbkey=Gene;gene=grcA;gene_biotype=protein_coding;locus_tag=PHA56_RS06745;old_locus_tag=PHA56_06745 NZ_CP116214.1 Protein Homology CDS 1393752 1394135 . + 0 ID=cds-WP_004104596.1;Parent=gene-PHA56_RS06745;Dbxref=Genbank:WP_004104596.1;Name=WP_004104596.1;Ontology_term=GO:0003824;gbkey=CDS;gene=grcA;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007728348.1;locus_tag=PHA56_RS06745;product=autonomous glycyl radical cofactor GrcA;protein_id=WP_004104596.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1394180 1395511 . - . ID=gene-PHA56_RS06750;Name=srmB;gbkey=Gene;gene=srmB;gene_biotype=protein_coding;locus_tag=PHA56_RS06750;old_locus_tag=PHA56_06750 NZ_CP116214.1 Protein Homology CDS 1394180 1395511 . - 0 ID=cds-WP_004853282.1;Parent=gene-PHA56_RS06750;Dbxref=Genbank:WP_004853282.1;Name=WP_004853282.1;Ontology_term=GO:0000027,GO:0003724;gbkey=CDS;gene=srmB;go_function=RNA helicase activity|0003724||IEA;go_process=ribosomal large subunit assembly|0000027||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228273.1;locus_tag=PHA56_RS06750;product=ATP-dependent RNA helicase SrmB;protein_id=WP_004853282.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1395644 1396384 . + . ID=gene-PHA56_RS06755;Name=PHA56_RS06755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS06755;old_locus_tag=PHA56_06755 NZ_CP116214.1 Protein Homology CDS 1395644 1396384 . + 0 ID=cds-WP_014839225.1;Parent=gene-PHA56_RS06755;Dbxref=Genbank:WP_014839225.1;Name=WP_014839225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228272.1;locus_tag=PHA56_RS06755;product=tRNA1(Val) (adenine(37)-N6)-methyltransferase;protein_id=WP_014839225.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1396369 1397988 . - . ID=gene-PHA56_RS06760;Name=nadB;gbkey=Gene;gene=nadB;gene_biotype=protein_coding;locus_tag=PHA56_RS06760;old_locus_tag=PHA56_06760 NZ_CP116214.1 Protein Homology CDS 1396369 1397988 . - 0 ID=cds-WP_038424781.1;Parent=gene-PHA56_RS06760;Dbxref=Genbank:WP_038424781.1;Name=WP_038424781.1;Ontology_term=GO:0009435,GO:0008734;gbkey=CDS;gene=nadB;go_function=L-aspartate oxidase activity|0008734||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228271.1;locus_tag=PHA56_RS06760;product=L-aspartate oxidase;protein_id=WP_038424781.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1398413 1398988 . + . ID=gene-PHA56_RS06765;Name=rpoE;gbkey=Gene;gene=rpoE;gene_biotype=protein_coding;locus_tag=PHA56_RS06765;old_locus_tag=PHA56_06765 NZ_CP116214.1 Protein Homology CDS 1398413 1398988 . + 0 ID=cds-WP_004104583.1;Parent=gene-PHA56_RS06765;Dbxref=Genbank:WP_004104583.1;Name=WP_004104583.1;Ontology_term=GO:0006352,GO:0006979,GO:0016987,GO:0005737;gbkey=CDS;gene=rpoE;go_component=cytoplasm|0005737||IEA;go_function=sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005070454.1;locus_tag=PHA56_RS06765;product=RNA polymerase sigma factor RpoE;protein_id=WP_004104583.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1399021 1399671 . + . ID=gene-PHA56_RS06770;Name=rseA;gbkey=Gene;gene=rseA;gene_biotype=protein_coding;locus_tag=PHA56_RS06770;old_locus_tag=PHA56_06770 NZ_CP116214.1 Protein Homology CDS 1399021 1399671 . + 0 ID=cds-WP_004853279.1;Parent=gene-PHA56_RS06770;Dbxref=Genbank:WP_004853279.1;Name=WP_004853279.1;Ontology_term=GO:0016989;gbkey=CDS;gene=rseA;go_function=sigma factor antagonist activity|0016989||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228269.1;locus_tag=PHA56_RS06770;product=anti-sigma-E factor RseA;protein_id=WP_004853279.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1399671 1400627 . + . ID=gene-PHA56_RS06775;Name=rseB;gbkey=Gene;gene=rseB;gene_biotype=protein_coding;locus_tag=PHA56_RS06775;old_locus_tag=PHA56_06775 NZ_CP116214.1 Protein Homology CDS 1399671 1400627 . + 0 ID=cds-WP_004853278.1;Parent=gene-PHA56_RS06775;Dbxref=Genbank:WP_004853278.1;Name=WP_004853278.1;gbkey=CDS;gene=rseB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004144355.1;locus_tag=PHA56_RS06775;product=sigma-E factor regulatory protein RseB;protein_id=WP_004853278.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1400624 1401103 . + . ID=gene-PHA56_RS06780;Name=rseC;gbkey=Gene;gene=rseC;gene_biotype=protein_coding;locus_tag=PHA56_RS06780;old_locus_tag=PHA56_06780 NZ_CP116214.1 Protein Homology CDS 1400624 1401103 . + 0 ID=cds-WP_014230402.1;Parent=gene-PHA56_RS06780;Dbxref=Genbank:WP_014230402.1;Name=WP_014230402.1;gbkey=CDS;gene=rseC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228267.1;locus_tag=PHA56_RS06780;product=SoxR-reducing system protein RseC;protein_id=WP_014230402.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1401289 1403088 . + . ID=gene-PHA56_RS06785;Name=lepA;gbkey=Gene;gene=lepA;gene_biotype=protein_coding;locus_tag=PHA56_RS06785;old_locus_tag=PHA56_06785 NZ_CP116214.1 Protein Homology CDS 1401289 1403088 . + 0 ID=cds-WP_004853275.1;Parent=gene-PHA56_RS06785;Dbxref=Genbank:WP_004853275.1;Name=WP_004853275.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=lepA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228266.1;locus_tag=PHA56_RS06785;product=translation elongation factor 4;protein_id=WP_004853275.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1403104 1404078 . + . ID=gene-PHA56_RS06790;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=PHA56_RS06790;old_locus_tag=PHA56_06790 NZ_CP116214.1 Protein Homology CDS 1403104 1404078 . + 0 ID=cds-WP_014230401.1;Parent=gene-PHA56_RS06790;Dbxref=Genbank:WP_014230401.1;Name=WP_014230401.1;Ontology_term=GO:0006465,GO:0004252;gbkey=CDS;gene=lepB;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=signal peptide processing|0006465||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014230401.1;locus_tag=PHA56_RS06790;product=signal peptidase I;protein_id=WP_014230401.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1404305 1404985 . + . ID=gene-PHA56_RS06795;Name=rnc;gbkey=Gene;gene=rnc;gene_biotype=protein_coding;locus_tag=PHA56_RS06795;old_locus_tag=PHA56_06795 NZ_CP116214.1 Protein Homology CDS 1404305 1404985 . + 0 ID=cds-WP_004104573.1;Parent=gene-PHA56_RS06795;Dbxref=Genbank:WP_004104573.1;Name=WP_004104573.1;Ontology_term=GO:0006396,GO:0004525;gbkey=CDS;gene=rnc;go_function=ribonuclease III activity|0004525||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015960048.1;locus_tag=PHA56_RS06795;product=ribonuclease III;protein_id=WP_004104573.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1404982 1405887 . + . ID=gene-PHA56_RS06800;Name=era;gbkey=Gene;gene=era;gene_biotype=protein_coding;locus_tag=PHA56_RS06800;old_locus_tag=PHA56_06800 NZ_CP116214.1 Protein Homology CDS 1404982 1405887 . + 0 ID=cds-WP_004104571.1;Parent=gene-PHA56_RS06800;Dbxref=Genbank:WP_004104571.1;Name=WP_004104571.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0019843,GO:0043022;gbkey=CDS;gene=era;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,rRNA binding|0019843||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461515.1;locus_tag=PHA56_RS06800;product=GTPase Era;protein_id=WP_004104571.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1406086 1406823 . + . ID=gene-PHA56_RS06805;Name=recO;gbkey=Gene;gene=recO;gene_biotype=protein_coding;locus_tag=PHA56_RS06805;old_locus_tag=PHA56_06805 NZ_CP116214.1 Protein Homology CDS 1406086 1406823 . + 0 ID=cds-WP_004853269.1;Parent=gene-PHA56_RS06805;Dbxref=Genbank:WP_004853269.1;Name=WP_004853269.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677;gbkey=CDS;gene=recO;go_function=DNA binding|0003677||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228261.1;locus_tag=PHA56_RS06805;product=DNA repair protein RecO;protein_id=WP_004853269.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1406835 1407566 . + . ID=gene-PHA56_RS06810;Name=pdxJ;gbkey=Gene;gene=pdxJ;gene_biotype=protein_coding;locus_tag=PHA56_RS06810;old_locus_tag=PHA56_06810 NZ_CP116214.1 Protein Homology CDS 1406835 1407566 . + 0 ID=cds-WP_014230400.1;Parent=gene-PHA56_RS06810;Dbxref=Genbank:WP_014230400.1;Name=WP_014230400.1;Ontology_term=GO:0008615,GO:0033856;gbkey=CDS;gene=pdxJ;go_function=pyridoxine 5'-phosphate synthase activity|0033856||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014230400.1;locus_tag=PHA56_RS06810;product=pyridoxine 5'-phosphate synthase;protein_id=WP_014230400.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1407566 1407946 . + . ID=gene-PHA56_RS06815;Name=acpS;gbkey=Gene;gene=acpS;gene_biotype=protein_coding;locus_tag=PHA56_RS06815;old_locus_tag=PHA56_06815 NZ_CP116214.1 Protein Homology CDS 1407566 1407946 . + 0 ID=cds-WP_014230399.1;Parent=gene-PHA56_RS06815;Dbxref=Genbank:WP_014230399.1;Name=WP_014230399.1;Ontology_term=GO:0008610,GO:0008897;gbkey=CDS;gene=acpS;go_function=holo-[acyl-carrier-protein] synthase activity|0008897||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228259.1;locus_tag=PHA56_RS06815;product=holo-ACP synthase;protein_id=WP_014230399.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1407993 1408253 . - . ID=gene-PHA56_RS06820;Name=PHA56_RS06820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS06820;old_locus_tag=PHA56_06820 NZ_CP116214.1 Protein Homology CDS 1407993 1408253 . - 0 ID=cds-WP_004114478.1;Parent=gene-PHA56_RS06820;Dbxref=Genbank:WP_004114478.1;Name=WP_004114478.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017373573.1;locus_tag=PHA56_RS06820;product=YfhL family 4Fe-4S dicluster ferredoxin;protein_id=WP_004114478.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1408420 1409268 . - . ID=gene-PHA56_RS06825;Name=PHA56_RS06825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS06825;old_locus_tag=PHA56_06825 NZ_CP116214.1 Protein Homology CDS 1408420 1409268 . - 0 ID=cds-WP_014230398.1;Parent=gene-PHA56_RS06825;Dbxref=Genbank:WP_014230398.1;Name=WP_014230398.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228257.1;locus_tag=PHA56_RS06825;product=MurR/RpiR family transcriptional regulator;protein_id=WP_014230398.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1409478 1410113 . + . ID=gene-PHA56_RS06830;Name=yfhb;gbkey=Gene;gene=yfhb;gene_biotype=protein_coding;locus_tag=PHA56_RS06830;old_locus_tag=PHA56_06830 NZ_CP116214.1 Protein Homology CDS 1409478 1410113 . + 0 ID=cds-WP_004853258.1;Parent=gene-PHA56_RS06830;Dbxref=Genbank:WP_004853258.1;Name=WP_004853258.1;Ontology_term=GO:0016787;gbkey=CDS;gene=yfhb;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461504.1;locus_tag=PHA56_RS06830;product=phosphatidylglycerophosphatase C;protein_id=WP_004853258.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1410172 1410678 . + . ID=gene-PHA56_RS06835;Name=tadA;gbkey=Gene;gene=tadA;gene_biotype=protein_coding;locus_tag=PHA56_RS06835;old_locus_tag=PHA56_06835 NZ_CP116214.1 Protein Homology CDS 1410172 1410678 . + 0 ID=cds-WP_014230397.1;Parent=gene-PHA56_RS06835;Dbxref=Genbank:WP_014230397.1;Name=WP_014230397.1;Ontology_term=GO:0002100,GO:0008251,GO:0008270;gbkey=CDS;gene=tadA;go_function=tRNA-specific adenosine deaminase activity|0008251||IEA,zinc ion binding|0008270||IEA;go_process=tRNA wobble adenosine to inosine editing|0002100||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004853255.1;locus_tag=PHA56_RS06835;product=tRNA adenosine(34) deaminase TadA;protein_id=WP_014230397.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1410675 1412291 . - . ID=gene-PHA56_RS06840;Name=mltF;gbkey=Gene;gene=mltF;gene_biotype=protein_coding;locus_tag=PHA56_RS06840;old_locus_tag=PHA56_06840 NZ_CP116214.1 Protein Homology CDS 1410675 1412291 . - 0 ID=cds-WP_014839219.1;Parent=gene-PHA56_RS06840;Dbxref=Genbank:WP_014839219.1;Name=WP_014839219.1;Ontology_term=GO:0000270,GO:0008933,GO:0016020;gbkey=CDS;gene=mltF;go_component=membrane|0016020||IEA;go_function=lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228254.1;locus_tag=PHA56_RS06840;product=membrane-bound lytic murein transglycosylase MltF;protein_id=WP_014839219.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1412466 1416353 . + . ID=gene-PHA56_RS06845;Name=purL;gbkey=Gene;gene=purL;gene_biotype=protein_coding;gene_synonym=purI;locus_tag=PHA56_RS06845;old_locus_tag=PHA56_06845 NZ_CP116214.1 Protein Homology CDS 1412466 1416353 . + 0 ID=cds-WP_119834597.1;Parent=gene-PHA56_RS06845;Dbxref=Genbank:WP_119834597.1;Name=WP_119834597.1;Ontology_term=GO:0004642;gbkey=CDS;gene=purL;go_function=phosphoribosylformylglycinamidine synthase activity|0004642||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228253.1;locus_tag=PHA56_RS06845;product=phosphoribosylformylglycinamidine synthase;protein_id=WP_119834597.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1416916 1418352 . + . ID=gene-PHA56_RS06850;Name=PHA56_RS06850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS06850;old_locus_tag=PHA56_06850 NZ_CP116214.1 Protein Homology CDS 1416916 1418352 . + 0 ID=cds-WP_103433610.1;Parent=gene-PHA56_RS06850;Dbxref=Genbank:WP_103433610.1;Name=WP_103433610.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004134904.1;locus_tag=PHA56_RS06850;product=HAMP domain-containing sensor histidine kinase;protein_id=WP_103433610.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1418366 1419070 . + . ID=gene-PHA56_RS06855;Name=qseG;gbkey=Gene;gene=qseG;gene_biotype=protein_coding;locus_tag=PHA56_RS06855;old_locus_tag=PHA56_06855 NZ_CP116214.1 Protein Homology CDS 1418366 1419070 . + 0 ID=cds-WP_038424778.1;Parent=gene-PHA56_RS06855;Dbxref=Genbank:WP_038424778.1;Name=WP_038424778.1;gbkey=CDS;gene=qseG;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228251.1;locus_tag=PHA56_RS06855;product=two-component system QseEF-associated lipoprotein QseG;protein_id=WP_038424778.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1419057 1420394 . + . ID=gene-PHA56_RS06860;Name=glrR;gbkey=Gene;gene=glrR;gene_biotype=protein_coding;locus_tag=PHA56_RS06860;old_locus_tag=PHA56_06860 NZ_CP116214.1 Protein Homology CDS 1419057 1420394 . + 0 ID=cds-WP_042945800.1;Parent=gene-PHA56_RS06860;Dbxref=Genbank:WP_042945800.1;Name=WP_042945800.1;Ontology_term=GO:0000160,GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;gene=glrR;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228250.1;locus_tag=PHA56_RS06860;product=two-component system response regulator GlrR;protein_id=WP_042945800.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1420460 1420798 . + . ID=gene-PHA56_RS06865;Name=glnB;gbkey=Gene;gene=glnB;gene_biotype=protein_coding;locus_tag=PHA56_RS06865;old_locus_tag=PHA56_06865 NZ_CP116214.1 Protein Homology CDS 1420460 1420798 . + 0 ID=cds-WP_002914032.1;Parent=gene-PHA56_RS06865;Dbxref=Genbank:WP_002914032.1;Name=WP_002914032.1;gbkey=CDS;gene=glnB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017373484.1;locus_tag=PHA56_RS06865;product=nitrogen regulatory protein P-II;protein_id=WP_002914032.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1420857 1422047 . - . ID=gene-PHA56_RS06870;Name=hmpA;gbkey=Gene;gene=hmpA;gene_biotype=protein_coding;locus_tag=PHA56_RS06870;old_locus_tag=PHA56_06870 NZ_CP116214.1 Protein Homology CDS 1420857 1422047 . - 0 ID=cds-WP_032693157.1;Parent=gene-PHA56_RS06870;Dbxref=Genbank:WP_032693157.1;Name=WP_032693157.1;Ontology_term=GO:0051409,GO:0008941,GO:0019825,GO:0020037,GO:0071949;gbkey=CDS;gene=hmpA;go_function=nitric oxide dioxygenase activity|0008941||IEA,oxygen binding|0019825||IEA,heme binding|0020037||IEA,FAD binding|0071949||IEA;go_process=response to nitrosative stress|0051409||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228248.1;locus_tag=PHA56_RS06870;product=NO-inducible flavohemoprotein;protein_id=WP_032693157.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1422373 1423626 . + . ID=gene-PHA56_RS06875;Name=glyA;gbkey=Gene;gene=glyA;gene_biotype=protein_coding;locus_tag=PHA56_RS06875;old_locus_tag=PHA56_06875 NZ_CP116214.1 Protein Homology CDS 1422373 1423626 . + 0 ID=cds-WP_009654385.1;Parent=gene-PHA56_RS06875;Dbxref=Genbank:WP_009654385.1;Name=WP_009654385.1;gbkey=CDS;gene=glyA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019077397.1;locus_tag=PHA56_RS06875;product=serine hydroxymethyltransferase;protein_id=WP_009654385.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1423682 1424104 . - . ID=gene-PHA56_RS06880;Name=PHA56_RS06880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS06880;old_locus_tag=PHA56_06880 NZ_CP116214.1 Protein Homology CDS 1423682 1424104 . - 0 ID=cds-WP_025106587.1;Parent=gene-PHA56_RS06880;Dbxref=Genbank:WP_025106587.1;Name=WP_025106587.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228246.1;locus_tag=PHA56_RS06880;product=DoxX family protein;protein_id=WP_025106587.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1424178 1425374 . - . ID=gene-PHA56_RS06885;Name=PHA56_RS06885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS06885;old_locus_tag=PHA56_06885 NZ_CP116214.1 Protein Homology CDS 1424178 1425374 . - 0 ID=cds-WP_014230381.1;Parent=gene-PHA56_RS06885;Dbxref=Genbank:WP_014230381.1;Name=WP_014230381.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004134920.1;locus_tag=PHA56_RS06885;product=ROK family transcriptional regulator;protein_id=WP_014230381.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1425487 1428762 . + . ID=gene-PHA56_RS06890;Name=PHA56_RS06890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS06890;old_locus_tag=PHA56_06890 NZ_CP116214.1 Protein Homology CDS 1425487 1428762 . + 0 ID=cds-WP_189087231.1;Parent=gene-PHA56_RS06890;Dbxref=Genbank:WP_189087231.1;Name=WP_189087231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228244.1;locus_tag=PHA56_RS06890;product=DUF5107 domain-containing protein;protein_id=WP_189087231.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1428833 1430269 . + . ID=gene-PHA56_RS06895;Name=PHA56_RS06895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS06895;old_locus_tag=PHA56_06895 NZ_CP116214.1 Protein Homology CDS 1428833 1430269 . + 0 ID=cds-WP_038424775.1;Parent=gene-PHA56_RS06895;Dbxref=Genbank:WP_038424775.1;Name=WP_038424775.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228243.1;locus_tag=PHA56_RS06895;product=sugar porter family MFS transporter;protein_id=WP_038424775.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1430269 1431105 . + . ID=gene-PHA56_RS06900;Name=PHA56_RS06900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS06900;old_locus_tag=PHA56_06900 NZ_CP116214.1 Protein Homology CDS 1430269 1431105 . + 0 ID=cds-WP_038424773.1;Parent=gene-PHA56_RS06900;Dbxref=Genbank:WP_038424773.1;Name=WP_038424773.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004853230.1;locus_tag=PHA56_RS06900;product=aldose 1-epimerase;protein_id=WP_038424773.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1431183 1432316 . + . ID=gene-PHA56_RS06905;Name=PHA56_RS06905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS06905;old_locus_tag=PHA56_06905 NZ_CP116214.1 Protein Homology CDS 1431183 1432316 . + 0 ID=cds-WP_004853228.1;Parent=gene-PHA56_RS06905;Dbxref=Genbank:WP_004853228.1;Name=WP_004853228.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004114454.1;locus_tag=PHA56_RS06905;product=3-phenylpropionate MFS transporter;protein_id=WP_004853228.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1432313 1433590 . - . ID=gene-PHA56_RS06910;Name=csiE;gbkey=Gene;gene=csiE;gene_biotype=protein_coding;locus_tag=PHA56_RS06910;old_locus_tag=PHA56_06910 NZ_CP116214.1 Protein Homology CDS 1432313 1433590 . - 0 ID=cds-WP_032693153.1;Parent=gene-PHA56_RS06910;Dbxref=Genbank:WP_032693153.1;Name=WP_032693153.1;gbkey=CDS;gene=csiE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004853226.1;locus_tag=PHA56_RS06910;product=stationary phase inducible protein CsiE;protein_id=WP_032693153.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1433715 1434353 . + . ID=gene-PHA56_RS06915;Name=PHA56_RS06915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS06915;old_locus_tag=PHA56_06915 NZ_CP116214.1 Protein Homology CDS 1433715 1434353 . + 0 ID=cds-WP_014839209.1;Parent=gene-PHA56_RS06915;Dbxref=Genbank:WP_014839209.1;Name=WP_014839209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019725302.1;locus_tag=PHA56_RS06915;product=DUF1007 family protein;protein_id=WP_014839209.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1434344 1435324 . + . ID=gene-PHA56_RS06920;Name=PHA56_RS06920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS06920;old_locus_tag=PHA56_06920 NZ_CP116214.1 Protein Homology CDS 1434344 1435324 . + 0 ID=cds-WP_038424772.1;Parent=gene-PHA56_RS06920;Dbxref=Genbank:WP_038424772.1;Name=WP_038424772.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228238.1;locus_tag=PHA56_RS06920;product=nickel/cobalt transporter;protein_id=WP_038424772.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1435379 1436182 . - . ID=gene-PHA56_RS06925;Name=suhB;gbkey=Gene;gene=suhB;gene_biotype=protein_coding;locus_tag=PHA56_RS06925;old_locus_tag=PHA56_06925 NZ_CP116214.1 Protein Homology CDS 1435379 1436182 . - 0 ID=cds-WP_004853221.1;Parent=gene-PHA56_RS06925;Dbxref=Genbank:WP_004853221.1;Name=WP_004853221.1;Ontology_term=GO:0046854,GO:0046855,GO:0008934;gbkey=CDS;gene=suhB;go_function=inositol monophosphate 1-phosphatase activity|0008934||IEA;go_process=phosphatidylinositol phosphate biosynthetic process|0046854||IEA,inositol phosphate dephosphorylation|0046855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000553460.1;locus_tag=PHA56_RS06925;product=inositol-1-monophosphatase;protein_id=WP_004853221.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1436303 1437043 . + . ID=gene-PHA56_RS06930;Name=trmJ;gbkey=Gene;gene=trmJ;gene_biotype=protein_coding;locus_tag=PHA56_RS06930;old_locus_tag=PHA56_06930 NZ_CP116214.1 Protein Homology CDS 1436303 1437043 . + 0 ID=cds-WP_014230373.1;Parent=gene-PHA56_RS06930;Dbxref=Genbank:WP_014230373.1;Name=WP_014230373.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173;gbkey=CDS;gene=trmJ;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004853219.1;locus_tag=PHA56_RS06930;product=tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ;protein_id=WP_014230373.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1437281 1437772 . + . ID=gene-PHA56_RS06935;Name=iscR;gbkey=Gene;gene=iscR;gene_biotype=protein_coding;locus_tag=PHA56_RS06935;old_locus_tag=PHA56_06935 NZ_CP116214.1 Protein Homology CDS 1437281 1437772 . + 0 ID=cds-WP_271292963.1;Parent=gene-PHA56_RS06935;Dbxref=Genbank:WP_271292963.1;Name=WP_271292963.1;gbkey=CDS;gene=iscR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002913993.1;locus_tag=PHA56_RS06935;product=Fe-S cluster assembly transcriptional regulator IscR;protein_id=WP_271292963.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1437949 1439163 . + . ID=gene-PHA56_RS06940;Name=iscS;gbkey=Gene;gene=iscS;gene_biotype=protein_coding;locus_tag=PHA56_RS06940;old_locus_tag=PHA56_06940 NZ_CP116214.1 Protein Homology CDS 1437949 1439163 . + 0 ID=cds-WP_004134936.1;Parent=gene-PHA56_RS06940;Dbxref=Genbank:WP_004134936.1;Name=WP_004134936.1;gbkey=CDS;gene=iscS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017459011.1;locus_tag=PHA56_RS06940;product=cysteine desulfurase;protein_id=WP_004134936.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1439190 1439576 . + . ID=gene-PHA56_RS06945;Name=iscU;gbkey=Gene;gene=iscU;gene_biotype=protein_coding;locus_tag=PHA56_RS06945;old_locus_tag=PHA56_06945 NZ_CP116214.1 Protein Homology CDS 1439190 1439576 . + 0 ID=cds-WP_002913991.1;Parent=gene-PHA56_RS06945;Dbxref=Genbank:WP_002913991.1;Name=WP_002913991.1;Ontology_term=GO:0016226,GO:0005198;gbkey=CDS;gene=iscU;go_function=structural molecule activity|0005198||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000331707.1;locus_tag=PHA56_RS06945;product=Fe-S cluster assembly scaffold IscU;protein_id=WP_002913991.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1439596 1439919 . + . ID=gene-PHA56_RS06950;Name=iscA;gbkey=Gene;gene=iscA;gene_biotype=protein_coding;locus_tag=PHA56_RS06950;old_locus_tag=PHA56_06950 NZ_CP116214.1 Protein Homology CDS 1439596 1439919 . + 0 ID=cds-WP_004104506.1;Parent=gene-PHA56_RS06950;Dbxref=Genbank:WP_004104506.1;Name=WP_004104506.1;gbkey=CDS;gene=iscA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228231.1;locus_tag=PHA56_RS06950;product=iron-sulfur cluster assembly protein IscA;protein_id=WP_004104506.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1439993 1440508 . + . ID=gene-PHA56_RS06955;Name=hscB;gbkey=Gene;gene=hscB;gene_biotype=protein_coding;locus_tag=PHA56_RS06955;old_locus_tag=PHA56_06955 NZ_CP116214.1 Protein Homology CDS 1439993 1440508 . + 0 ID=cds-WP_004104505.1;Parent=gene-PHA56_RS06955;Dbxref=Genbank:WP_004104505.1;Name=WP_004104505.1;Ontology_term=GO:0097428,GO:0051087;gbkey=CDS;gene=hscB;go_function=chaperone binding|0051087||IEA;go_process=protein maturation by iron-sulfur cluster transfer|0097428||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228230.1;locus_tag=PHA56_RS06955;product=co-chaperone HscB;protein_id=WP_004104505.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1440524 1442374 . + . ID=gene-PHA56_RS06960;Name=hscA;gbkey=Gene;gene=hscA;gene_biotype=protein_coding;locus_tag=PHA56_RS06960;old_locus_tag=PHA56_06960 NZ_CP116214.1 Protein Homology CDS 1440524 1442374 . + 0 ID=cds-WP_014230372.1;Parent=gene-PHA56_RS06960;Dbxref=Genbank:WP_014230372.1;Name=WP_014230372.1;Ontology_term=GO:0006457,GO:0005515;gbkey=CDS;gene=hscA;go_function=protein binding|0005515||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001559634.1;locus_tag=PHA56_RS06960;product=Fe-S protein assembly chaperone HscA;protein_id=WP_014230372.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1442376 1442711 . + . ID=gene-PHA56_RS06965;Name=fdx;gbkey=Gene;gene=fdx;gene_biotype=protein_coding;locus_tag=PHA56_RS06965;old_locus_tag=PHA56_06965 NZ_CP116214.1 Protein Homology CDS 1442376 1442711 . + 0 ID=cds-WP_004104503.1;Parent=gene-PHA56_RS06965;Dbxref=Genbank:WP_004104503.1;Name=WP_004104503.1;Ontology_term=GO:0016226;gbkey=CDS;gene=fdx;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683702.1;locus_tag=PHA56_RS06965;product=ISC system 2Fe-2S type ferredoxin;protein_id=WP_004104503.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1442713 1442913 . + . ID=gene-PHA56_RS06970;Name=iscX;gbkey=Gene;gene=iscX;gene_biotype=protein_coding;locus_tag=PHA56_RS06970;old_locus_tag=PHA56_06970 NZ_CP116214.1 Protein Homology CDS 1442713 1442913 . + 0 ID=cds-WP_004104502.1;Parent=gene-PHA56_RS06970;Dbxref=Genbank:WP_004104502.1;Name=WP_004104502.1;Ontology_term=GO:0016226,GO:0005506;gbkey=CDS;gene=iscX;go_function=iron ion binding|0005506||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004104502.1;locus_tag=PHA56_RS06970;product=Fe-S cluster assembly protein IscX;protein_id=WP_004104502.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1443021 1444307 . + . ID=gene-PHA56_RS06975;Name=pepB;gbkey=Gene;gene=pepB;gene_biotype=protein_coding;locus_tag=PHA56_RS06975;old_locus_tag=PHA56_06975 NZ_CP116214.1 Protein Homology CDS 1443021 1444307 . + 0 ID=cds-WP_014230371.1;Parent=gene-PHA56_RS06975;Dbxref=Genbank:WP_014230371.1;Name=WP_014230371.1;Ontology_term=GO:0006508,GO:0019538,GO:0030145,GO:0070006;gbkey=CDS;gene=pepB;go_function=manganese ion binding|0030145||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA,protein metabolic process|0019538||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228226.1;locus_tag=PHA56_RS06975;product=aminopeptidase PepB;protein_id=WP_014230371.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1444419 1445195 . + . ID=gene-PHA56_RS06980;Name=sseB;gbkey=Gene;gene=sseB;gene_biotype=protein_coding;locus_tag=PHA56_RS06980;old_locus_tag=PHA56_06980 NZ_CP116214.1 Protein Homology CDS 1444419 1445195 . + 0 ID=cds-WP_014230370.1;Parent=gene-PHA56_RS06980;Dbxref=Genbank:WP_014230370.1;Name=WP_014230370.1;gbkey=CDS;gene=sseB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228225.1;locus_tag=PHA56_RS06980;product=enhanced serine sensitivity protein SseB;protein_id=WP_014230370.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1445235 1446080 . - . ID=gene-PHA56_RS06985;Name=sseA;gbkey=Gene;gene=sseA;gene_biotype=protein_coding;locus_tag=PHA56_RS06985;old_locus_tag=PHA56_06985 NZ_CP116214.1 Protein Homology CDS 1445235 1446080 . - 0 ID=cds-WP_014230369.1;Parent=gene-PHA56_RS06985;Dbxref=Genbank:WP_014230369.1;Name=WP_014230369.1;Ontology_term=GO:0004792;gbkey=CDS;gene=sseA;go_function=thiosulfate sulfurtransferase activity|0004792||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004853206.1;locus_tag=PHA56_RS06985;product=3-mercaptopyruvate sulfurtransferase;protein_id=WP_014230369.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1446205 1447389 . - . ID=gene-PHA56_RS06990;Name=PHA56_RS06990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS06990;old_locus_tag=PHA56_06990 NZ_CP116214.1 Protein Homology CDS 1446205 1447389 . - 0 ID=cds-WP_038424770.1;Parent=gene-PHA56_RS06990;Dbxref=Genbank:WP_038424770.1;Name=WP_038424770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004104498.1;locus_tag=PHA56_RS06990;product=M20 family metallopeptidase;protein_id=WP_038424770.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1447425 1448636 . - . ID=gene-PHA56_RS06995;Name=PHA56_RS06995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS06995;old_locus_tag=PHA56_06995 NZ_CP116214.1 Protein Homology CDS 1447425 1448636 . - 0 ID=cds-WP_014230367.1;Parent=gene-PHA56_RS06995;Dbxref=Genbank:WP_014230367.1;Name=WP_014230367.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004104497.1;locus_tag=PHA56_RS06995;product=hypothetical protein;protein_id=WP_014230367.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1449037 1453983 . + . ID=gene-PHA56_RS07000;Name=PHA56_RS07000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS07000;old_locus_tag=PHA56_07000 NZ_CP116214.1 Protein Homology CDS 1449037 1453983 . + 0 ID=cds-WP_014230366.1;Parent=gene-PHA56_RS07000;Dbxref=Genbank:WP_014230366.1;Name=WP_014230366.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228222.1;locus_tag=PHA56_RS07000;product=alpha-2-macroglobulin;protein_id=WP_014230366.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1453984 1456308 . + . ID=gene-PHA56_RS07005;Name=pbpC;gbkey=Gene;gene=pbpC;gene_biotype=protein_coding;locus_tag=PHA56_RS07005;old_locus_tag=PHA56_07005 NZ_CP116214.1 Protein Homology CDS 1453984 1456308 . + 0 ID=cds-WP_014230365.1;Parent=gene-PHA56_RS07005;Dbxref=Genbank:WP_014230365.1;Name=WP_014230365.1;Note=penicillin-binding protein 1C;Ontology_term=GO:0009252,GO:0008658,GO:0008955;gbkey=CDS;gene=pbpC;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228221.1;locus_tag=PHA56_RS07005;product=peptidoglycan glycosyltransferase PbpC;protein_id=WP_014230365.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1456479 1456910 . + . ID=gene-PHA56_RS07010;Name=ndk;gbkey=Gene;gene=ndk;gene_biotype=protein_coding;locus_tag=PHA56_RS07010;old_locus_tag=PHA56_07010 NZ_CP116214.1 Protein Homology CDS 1456479 1456910 . + 0 ID=cds-WP_004114414.1;Parent=gene-PHA56_RS07010;Dbxref=Genbank:WP_004114414.1;Name=WP_004114414.1;Ontology_term=GO:0006165,GO:0004550;gbkey=CDS;gene=ndk;go_function=nucleoside diphosphate kinase activity|0004550||IEA;go_process=nucleoside diphosphate phosphorylation|0006165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000963848.1;locus_tag=PHA56_RS07010;product=nucleoside-diphosphate kinase;protein_id=WP_004114414.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1457324 1458490 . + . ID=gene-PHA56_RS07015;Name=PHA56_RS07015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS07015;old_locus_tag=PHA56_07015 NZ_CP116214.1 Protein Homology CDS 1457324 1458490 . + 0 ID=cds-WP_004123586.1;Parent=gene-PHA56_RS07015;Dbxref=Genbank:WP_004123586.1;Name=WP_004123586.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228219.1;locus_tag=PHA56_RS07015;product=bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN;protein_id=WP_004123586.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1458768 1459739 . + . ID=gene-PHA56_RS07020;Name=rodZ;gbkey=Gene;gene=rodZ;gene_biotype=protein_coding;locus_tag=PHA56_RS07020;old_locus_tag=PHA56_07020 NZ_CP116214.1 Protein Homology CDS 1458768 1459739 . + 0 ID=cds-WP_014230364.1;Parent=gene-PHA56_RS07020;Dbxref=Genbank:WP_014230364.1;Name=WP_014230364.1;Ontology_term=GO:0008360,GO:0003677,GO:0016020;gbkey=CDS;gene=rodZ;go_component=membrane|0016020||IEA;go_function=DNA binding|0003677||IEA;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228218.1;locus_tag=PHA56_RS07020;product=cytoskeleton protein RodZ;protein_id=WP_014230364.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1459766 1460887 . + . ID=gene-PHA56_RS07025;Name=ispG;gbkey=Gene;gene=ispG;gene_biotype=protein_coding;gene_synonym=gcpE;locus_tag=PHA56_RS07025;old_locus_tag=PHA56_07025 NZ_CP116214.1 Protein Homology CDS 1459766 1460887 . + 0 ID=cds-WP_014230363.1;Parent=gene-PHA56_RS07025;Dbxref=Genbank:WP_014230363.1;Name=WP_014230363.1;Ontology_term=GO:0044237,GO:0046429;gbkey=CDS;gene=ispG;go_function=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity|0046429||IEA;go_process=cellular metabolic process|0044237||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228217.1;locus_tag=PHA56_RS07025;product=flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase;protein_id=WP_014230363.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1460979 1462253 . + . ID=gene-PHA56_RS07030;Name=hisS;gbkey=Gene;gene=hisS;gene_biotype=protein_coding;locus_tag=PHA56_RS07030;old_locus_tag=PHA56_07030 NZ_CP116214.1 Protein Homology CDS 1460979 1462253 . + 0 ID=cds-WP_014230362.1;Parent=gene-PHA56_RS07030;Dbxref=Genbank:WP_014230362.1;Name=WP_014230362.1;Ontology_term=GO:0006427,GO:0004821,GO:0005737;gbkey=CDS;gene=hisS;go_component=cytoplasm|0005737||IEA;go_function=histidine-tRNA ligase activity|0004821||IEA;go_process=histidyl-tRNA aminoacylation|0006427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311403.1;locus_tag=PHA56_RS07030;product=histidine--tRNA ligase;protein_id=WP_014230362.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1462288 1462908 . + . ID=gene-PHA56_RS07035;Name=PHA56_RS07035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS07035;old_locus_tag=PHA56_07035 NZ_CP116214.1 Protein Homology CDS 1462288 1462908 . + 0 ID=cds-WP_004853194.1;Parent=gene-PHA56_RS07035;Dbxref=Genbank:WP_004853194.1;Name=WP_004853194.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228215.1;locus_tag=PHA56_RS07035;product=YfgM family protein;protein_id=WP_004853194.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1462919 1464097 . + . ID=gene-PHA56_RS07040;Name=bamB;gbkey=Gene;gene=bamB;gene_biotype=protein_coding;locus_tag=PHA56_RS07040;old_locus_tag=PHA56_07040 NZ_CP116214.1 Protein Homology CDS 1462919 1464097 . + 0 ID=cds-WP_004104478.1;Parent=gene-PHA56_RS07040;Dbxref=Genbank:WP_004104478.1;Name=WP_004104478.1;Ontology_term=GO:0005515;gbkey=CDS;gene=bamB;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228214.1;locus_tag=PHA56_RS07040;product=outer membrane protein assembly factor BamB;protein_id=WP_004104478.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1464213 1465691 . + . ID=gene-PHA56_RS07045;Name=der;gbkey=Gene;gene=der;gene_biotype=protein_coding;locus_tag=PHA56_RS07045;old_locus_tag=PHA56_07045 NZ_CP116214.1 Protein Homology CDS 1464213 1465691 . + 0 ID=cds-WP_014230361.1;Parent=gene-PHA56_RS07045;Dbxref=Genbank:WP_014230361.1;Name=WP_014230361.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=der;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461454.1;locus_tag=PHA56_RS07045;product=ribosome biogenesis GTPase Der;protein_id=WP_014230361.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1465919 1467172 . + . ID=gene-PHA56_RS07050;Name=PHA56_RS07050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS07050;old_locus_tag=PHA56_07050 NZ_CP116214.1 Protein Homology CDS 1465919 1467172 . + 0 ID=cds-WP_038423059.1;Parent=gene-PHA56_RS07050;Dbxref=Genbank:WP_038423059.1;Name=WP_038423059.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004213157.1;locus_tag=PHA56_RS07050;product=site-specific integrase;protein_id=WP_038423059.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1467263 1468123 . + . ID=gene-PHA56_RS07055;Name=PHA56_RS07055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS07055;old_locus_tag=PHA56_07055 NZ_CP116214.1 GeneMarkS-2+ CDS 1467263 1468123 . + 0 ID=cds-WP_189087232.1;Parent=gene-PHA56_RS07055;Dbxref=Genbank:WP_189087232.1;Name=WP_189087232.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PHA56_RS07055;product=hypothetical protein;protein_id=WP_189087232.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1468214 1468432 . + . ID=gene-PHA56_RS07060;Name=PHA56_RS07060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS07060;old_locus_tag=PHA56_07060 NZ_CP116214.1 Protein Homology CDS 1468214 1468432 . + 0 ID=cds-WP_071889574.1;Parent=gene-PHA56_RS07060;Dbxref=Genbank:WP_071889574.1;Name=WP_071889574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000134807.1;locus_tag=PHA56_RS07060;product=AlpA family phage regulatory protein;protein_id=WP_071889574.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1468432 1468863 . + . ID=gene-PHA56_RS07065;Name=PHA56_RS07065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS07065;old_locus_tag=PHA56_07065 NZ_CP116214.1 Protein Homology CDS 1468432 1468863 . + 0 ID=cds-WP_189087233.1;Parent=gene-PHA56_RS07065;Dbxref=Genbank:WP_189087233.1;Name=WP_189087233.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016535037.1;locus_tag=PHA56_RS07065;product=hypothetical protein;protein_id=WP_189087233.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1468877 1469686 . + . ID=gene-PHA56_RS07070;Name=PHA56_RS07070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS07070;old_locus_tag=PHA56_07070 NZ_CP116214.1 Protein Homology CDS 1468877 1469686 . + 0 ID=cds-WP_189087234.1;Parent=gene-PHA56_RS07070;Dbxref=Genbank:WP_189087234.1;Name=WP_189087234.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004177036.1;locus_tag=PHA56_RS07070;product=antA/AntB antirepressor family protein;protein_id=WP_189087234.1;transl_table=11 NZ_CP116214.1 RefSeq pseudogene 1469679 1469814 . + . ID=gene-PHA56_RS07075;Name=PHA56_RS07075;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS07075;old_locus_tag=PHA56_07075;pseudo=true NZ_CP116214.1 Protein Homology CDS 1469679 1469814 . + 0 ID=cds-PHA56_RS07075;Parent=gene-PHA56_RS07075;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014837681.1;locus_tag=PHA56_RS07075;product=DUF4222 domain-containing protein;pseudo=true;transl_table=11 NZ_CP116214.1 RefSeq gene 1469841 1470584 . + . ID=gene-PHA56_RS07080;Name=PHA56_RS07080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS07080;old_locus_tag=PHA56_07080 NZ_CP116214.1 Protein Homology CDS 1469841 1470584 . + 0 ID=cds-WP_223226726.1;Parent=gene-PHA56_RS07080;Dbxref=Genbank:WP_223226726.1;Name=WP_223226726.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004177034.1;locus_tag=PHA56_RS07080;product=host cell division inhibitor Icd-like protein;protein_id=WP_223226726.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1470577 1470756 . + . ID=gene-PHA56_RS07085;Name=PHA56_RS07085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS07085;old_locus_tag=PHA56_07085 NZ_CP116214.1 Protein Homology CDS 1470577 1470756 . + 0 ID=cds-WP_022064556.1;Parent=gene-PHA56_RS07085;Dbxref=Genbank:WP_022064556.1;Name=WP_022064556.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004177033.1;locus_tag=PHA56_RS07085;product=hypothetical protein;protein_id=WP_022064556.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1470753 1471070 . + . ID=gene-PHA56_RS07090;Name=PHA56_RS07090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS07090;old_locus_tag=PHA56_07090 NZ_CP116214.1 Protein Homology CDS 1470753 1471070 . + 0 ID=cds-WP_189087235.1;Parent=gene-PHA56_RS07090;Dbxref=Genbank:WP_189087235.1;Name=WP_189087235.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004177032.1;locus_tag=PHA56_RS07090;product=ubiquinol-cytochrome C reductase;protein_id=WP_189087235.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1471067 1471330 . + . ID=gene-PHA56_RS07095;Name=PHA56_RS07095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS07095;old_locus_tag=PHA56_07095 NZ_CP116214.1 Protein Homology CDS 1471067 1471330 . + 0 ID=cds-WP_004202353.1;Parent=gene-PHA56_RS07095;Dbxref=Genbank:WP_004202353.1;Name=WP_004202353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004202353.1;locus_tag=PHA56_RS07095;product=hypothetical protein;protein_id=WP_004202353.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1471327 1471542 . + . ID=gene-PHA56_RS07100;Name=PHA56_RS07100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS07100;old_locus_tag=PHA56_07100 NZ_CP116214.1 Protein Homology CDS 1471327 1471542 . + 0 ID=cds-WP_004177030.1;Parent=gene-PHA56_RS07100;Dbxref=Genbank:WP_004177030.1;Name=WP_004177030.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004177030.1;locus_tag=PHA56_RS07100;product=hypothetical protein;protein_id=WP_004177030.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1471539 1473653 . + . ID=gene-PHA56_RS07105;Name=PHA56_RS07105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS07105;old_locus_tag=PHA56_07105 NZ_CP116214.1 Protein Homology CDS 1471539 1473653 . + 0 ID=cds-WP_189087236.1;Parent=gene-PHA56_RS07105;Dbxref=Genbank:WP_189087236.1;Name=WP_189087236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004177029.1;locus_tag=PHA56_RS07105;product=DUF927 domain-containing protein;protein_id=WP_189087236.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1473837 1474253 . + . ID=gene-PHA56_RS07110;Name=PHA56_RS07110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS07110;old_locus_tag=PHA56_07110 NZ_CP116214.1 Protein Homology CDS 1473837 1474253 . + 0 ID=cds-WP_189087237.1;Parent=gene-PHA56_RS07110;Dbxref=Genbank:WP_189087237.1;Name=WP_189087237.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000126714.1;locus_tag=PHA56_RS07110;product=single-stranded DNA-binding protein;protein_id=WP_189087237.1;transl_table=11 NZ_CP116214.1 RefSeq pseudogene 1474303 1474644 . + . ID=gene-PHA56_RS07115;Name=PHA56_RS07115;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS07115;old_locus_tag=PHA56_07115;partial=true;pseudo=true;start_range=.,1474303 NZ_CP116214.1 Protein Homology CDS 1474303 1474644 . + 0 ID=cds-PHA56_RS07115;Parent=gene-PHA56_RS07115;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001399242.1;locus_tag=PHA56_RS07115;partial=true;product=capsid portal protein;pseudo=true;start_range=.,1474303;transl_table=11 NZ_CP116214.1 RefSeq gene 1474693 1475388 . - . ID=gene-PHA56_RS07120;Name=PHA56_RS07120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS07120;old_locus_tag=PHA56_07120 NZ_CP116214.1 Protein Homology CDS 1474693 1475388 . - 0 ID=cds-WP_189087238.1;Parent=gene-PHA56_RS07120;Dbxref=Genbank:WP_189087238.1;Name=WP_189087238.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000080840.1;locus_tag=PHA56_RS07120;product=hypothetical protein;protein_id=WP_189087238.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1475408 1476472 . - . ID=gene-PHA56_RS07125;Name=PHA56_RS07125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS07125;old_locus_tag=PHA56_07125 NZ_CP116214.1 Protein Homology CDS 1475408 1476472 . - 0 ID=cds-WP_189087239.1;Parent=gene-PHA56_RS07125;Dbxref=Genbank:WP_189087239.1;Name=WP_189087239.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000789322.1;locus_tag=PHA56_RS07125;product=hypothetical protein;protein_id=WP_189087239.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1476469 1477533 . - . ID=gene-PHA56_RS07130;Name=PHA56_RS07130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS07130;old_locus_tag=PHA56_07130 NZ_CP116214.1 Protein Homology CDS 1476469 1477533 . - 0 ID=cds-WP_189087240.1;Parent=gene-PHA56_RS07130;Dbxref=Genbank:WP_189087240.1;Name=WP_189087240.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000829584.1;locus_tag=PHA56_RS07130;product=hypothetical protein;protein_id=WP_189087240.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1477785 1477970 . + . ID=gene-PHA56_RS07135;Name=PHA56_RS07135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS07135;old_locus_tag=PHA56_07135 NZ_CP116214.1 Protein Homology CDS 1477785 1477970 . + 0 ID=cds-WP_189087241.1;Parent=gene-PHA56_RS07135;Dbxref=Genbank:WP_189087241.1;Name=WP_189087241.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017146458.1;locus_tag=PHA56_RS07135;product=hypothetical protein;protein_id=WP_189087241.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1478075 1478620 . - . ID=gene-PHA56_RS07140;Name=PHA56_RS07140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS07140;old_locus_tag=PHA56_07140 NZ_CP116214.1 Protein Homology CDS 1478075 1478620 . - 0 ID=cds-WP_189087242.1;Parent=gene-PHA56_RS07140;Dbxref=Genbank:WP_189087242.1;Name=WP_189087242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004202371.1;locus_tag=PHA56_RS07140;product=hypothetical protein;protein_id=WP_189087242.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1478819 1479013 . + . ID=gene-PHA56_RS07145;Name=PHA56_RS07145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS07145;old_locus_tag=PHA56_07145 NZ_CP116214.1 Protein Homology CDS 1478819 1479013 . + 0 ID=cds-WP_004202372.1;Parent=gene-PHA56_RS07145;Dbxref=Genbank:WP_004202372.1;Name=WP_004202372.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001231130.1;locus_tag=PHA56_RS07145;product=hypothetical protein;protein_id=WP_004202372.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1479045 1480862 . + . ID=gene-PHA56_RS07150;Name=PHA56_RS07150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS07150;old_locus_tag=PHA56_07150 NZ_CP116214.1 Protein Homology CDS 1479045 1480862 . + 0 ID=cds-WP_189087243.1;Parent=gene-PHA56_RS07150;Dbxref=Genbank:WP_189087243.1;Name=WP_189087243.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004202373.1;locus_tag=PHA56_RS07150;product=hypothetical protein;protein_id=WP_189087243.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1480942 1481463 . + . ID=gene-PHA56_RS07155;Name=PHA56_RS07155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS07155;old_locus_tag=PHA56_07155 NZ_CP116214.1 Protein Homology CDS 1480942 1481463 . + 0 ID=cds-WP_180263886.1;Parent=gene-PHA56_RS07155;Dbxref=Genbank:WP_180263886.1;Name=WP_180263886.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000930132.1;locus_tag=PHA56_RS07155;product=hypothetical protein;protein_id=WP_180263886.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1481971 1482294 . + . ID=gene-PHA56_RS07160;Name=PHA56_RS07160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS07160;old_locus_tag=PHA56_07160 NZ_CP116214.1 Protein Homology CDS 1481971 1482294 . + 0 ID=cds-WP_223226727.1;Parent=gene-PHA56_RS07160;Dbxref=Genbank:WP_223226727.1;Name=WP_223226727.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017146453.1;locus_tag=PHA56_RS07160;product=HGGxSTG domain-containing protein;protein_id=WP_223226727.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1482386 1482757 . + . ID=gene-PHA56_RS07165;Name=PHA56_RS07165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS07165;old_locus_tag=PHA56_07165 NZ_CP116214.1 Protein Homology CDS 1482386 1482757 . + 0 ID=cds-WP_016831727.1;Parent=gene-PHA56_RS07165;Dbxref=Genbank:WP_016831727.1;Name=WP_016831727.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004848464.1;locus_tag=PHA56_RS07165;product=hypothetical protein;protein_id=WP_016831727.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1484575 1485537 . + . ID=gene-PHA56_RS07170;Name=PHA56_RS07170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS07170;old_locus_tag=PHA56_07170 NZ_CP116214.1 Protein Homology CDS 1484575 1485537 . + 0 ID=cds-WP_016831724.1;Parent=gene-PHA56_RS07170;Dbxref=Genbank:WP_016831724.1;Name=WP_016831724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000290520.1;locus_tag=PHA56_RS07170;product=Abi family protein;protein_id=WP_016831724.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1485570 1485995 . - . ID=gene-PHA56_RS07175;Name=PHA56_RS07175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS07175;old_locus_tag=PHA56_07175 NZ_CP116214.1 Protein Homology CDS 1485570 1485995 . - 0 ID=cds-WP_038423071.1;Parent=gene-PHA56_RS07175;Dbxref=Genbank:WP_038423071.1;Name=WP_038423071.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004140774.1;locus_tag=PHA56_RS07175;product=hypothetical protein;protein_id=WP_038423071.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1486498 1486692 . - . ID=gene-PHA56_RS07180;Name=PHA56_RS07180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS07180;old_locus_tag=PHA56_07180 NZ_CP116214.1 Protein Homology CDS 1486498 1486692 . - 0 ID=cds-WP_189087244.1;Parent=gene-PHA56_RS07180;Dbxref=Genbank:WP_189087244.1;Name=WP_189087244.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004202379.1;locus_tag=PHA56_RS07180;product=AlpA family transcriptional regulator;protein_id=WP_189087244.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1486913 1488028 . + . ID=gene-PHA56_RS07185;Name=PHA56_RS07185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS07185;old_locus_tag=PHA56_07185 NZ_CP116214.1 Protein Homology CDS 1486913 1488028 . + 0 ID=cds-WP_048289948.1;Parent=gene-PHA56_RS07185;Dbxref=Genbank:WP_048289948.1;Name=WP_048289948.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000051879.1;locus_tag=PHA56_RS07185;product=site-specific integrase;protein_id=WP_048289948.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1488304 1488681 . + . ID=gene-PHA56_RS07190;Name=PHA56_RS07190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS07190;old_locus_tag=PHA56_07190 NZ_CP116214.1 Protein Homology CDS 1488304 1488681 . + 0 ID=cds-WP_014230360.1;Parent=gene-PHA56_RS07190;Dbxref=Genbank:WP_014230360.1;Name=WP_014230360.1;Ontology_term=GO:0006810,GO:0015291;gbkey=CDS;go_function=secondary active transmembrane transporter activity|0015291||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004114407.1;locus_tag=PHA56_RS07190;product=TonB family protein;protein_id=WP_014230360.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1488741 1489133 . + . ID=gene-PHA56_RS07195;Name=PHA56_RS07195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS07195;old_locus_tag=PHA56_07195 NZ_CP116214.1 Protein Homology CDS 1488741 1489133 . + 0 ID=cds-WP_014839197.1;Parent=gene-PHA56_RS07195;Dbxref=Genbank:WP_014839197.1;Name=WP_014839197.1;Ontology_term=GO:0043213,GO:0019534,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=toxin transmembrane transporter activity|0019534||IEA;go_process=bacteriocin transport|0043213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004104474.1;locus_tag=PHA56_RS07195;product=cell envelope integrity TolA C-terminal domain-containing protein;protein_id=WP_014839197.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1489253 1489468 . + . ID=gene-PHA56_RS07200;Name=PHA56_RS07200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS07200;old_locus_tag=PHA56_07200 NZ_CP116214.1 Protein Homology CDS 1489253 1489468 . + 0 ID=cds-WP_014230359.1;Parent=gene-PHA56_RS07200;Dbxref=Genbank:WP_014230359.1;Name=WP_014230359.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004123550.1;locus_tag=PHA56_RS07200;product=zinc ribbon domain-containing protein;protein_id=WP_014230359.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1489465 1489809 . - . ID=gene-PHA56_RS07205;Name=PHA56_RS07205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS07205;old_locus_tag=PHA56_07205 NZ_CP116214.1 Protein Homology CDS 1489465 1489809 . - 0 ID=cds-WP_014230358.1;Parent=gene-PHA56_RS07205;Dbxref=Genbank:WP_014230358.1;Name=WP_014230358.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004123545.1;locus_tag=PHA56_RS07205;product=hypothetical protein;protein_id=WP_014230358.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1489806 1490834 . - . ID=gene-PHA56_RS07210;Name=PHA56_RS07210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS07210;old_locus_tag=PHA56_07210 NZ_CP116214.1 Protein Homology CDS 1489806 1490834 . - 0 ID=cds-WP_014230357.1;Parent=gene-PHA56_RS07210;Dbxref=Genbank:WP_014230357.1;Name=WP_014230357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004853180.1;locus_tag=PHA56_RS07210;product=M4 family metallopeptidase;protein_id=WP_014230357.1;transl_table=11 NZ_CP116214.1 RefSeq pseudogene 1490906 1492289 . - . ID=gene-PHA56_RS07215;Name=xseA;gbkey=Gene;gene=xseA;gene_biotype=pseudogene;locus_tag=PHA56_RS07215;old_locus_tag=PHA56_07215;partial=true;pseudo=true;start_range=.,1490906 NZ_CP116214.1 Protein Homology CDS 1490906 1492289 . - 0 ID=cds-PHA56_RS07215;Parent=gene-PHA56_RS07215;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006308,GO:0008855,GO:0009318;gbkey=CDS;gene=xseA;go_component=exodeoxyribonuclease VII complex|0009318||IEA;go_function=exodeoxyribonuclease VII activity|0008855||IEA;go_process=DNA catabolic process|0006308||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228210.1;locus_tag=PHA56_RS07215;partial=true;product=exodeoxyribonuclease VII large subunit;pseudo=true;start_range=.,1490906;transl_table=11 NZ_CP116214.1 RefSeq gene 1492448 1493914 . + . ID=gene-PHA56_RS07220;Name=guaB;gbkey=Gene;gene=guaB;gene_biotype=protein_coding;locus_tag=PHA56_RS07220;old_locus_tag=PHA56_07220 NZ_CP116214.1 Protein Homology CDS 1492448 1493914 . + 0 ID=cds-WP_014230355.1;Parent=gene-PHA56_RS07220;Dbxref=Genbank:WP_014230355.1;Name=WP_014230355.1;Ontology_term=GO:0009152,GO:0003938;gbkey=CDS;gene=guaB;go_function=IMP dehydrogenase activity|0003938||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004151980.1;locus_tag=PHA56_RS07220;product=IMP dehydrogenase;protein_id=WP_014230355.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1493983 1495560 . + . ID=gene-PHA56_RS07225;Name=guaA;gbkey=Gene;gene=guaA;gene_biotype=protein_coding;locus_tag=PHA56_RS07225;old_locus_tag=PHA56_07225 NZ_CP116214.1 Protein Homology CDS 1493983 1495560 . + 0 ID=cds-WP_004853173.1;Parent=gene-PHA56_RS07225;Dbxref=Genbank:WP_004853173.1;Name=WP_004853173.1;Ontology_term=GO:0006177,GO:0003922,GO:0005524,GO:0016462;gbkey=CDS;gene=guaA;go_function=GMP synthase (glutamine-hydrolyzing) activity|0003922||IEA,ATP binding|0005524||IEA,pyrophosphatase activity|0016462||IEA;go_process=GMP biosynthetic process|0006177||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130181.1;locus_tag=PHA56_RS07225;product=glutamine-hydrolyzing GMP synthase;protein_id=WP_004853173.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1495698 1496894 . - . ID=gene-PHA56_RS07230;Name=PHA56_RS07230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS07230;old_locus_tag=PHA56_07230 NZ_CP116214.1 Protein Homology CDS 1495698 1496894 . - 0 ID=cds-WP_038423072.1;Parent=gene-PHA56_RS07230;Dbxref=Genbank:WP_038423072.1;Name=WP_038423072.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009654370.1;locus_tag=PHA56_RS07230;product=MFS transporter;protein_id=WP_038423072.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1496993 1497880 . + . ID=gene-PHA56_RS07235;Name=PHA56_RS07235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS07235;old_locus_tag=PHA56_07235 NZ_CP116214.1 Protein Homology CDS 1496993 1497880 . + 0 ID=cds-WP_014230353.1;Parent=gene-PHA56_RS07235;Dbxref=Genbank:WP_014230353.1;Name=WP_014230353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009654346.1;locus_tag=PHA56_RS07235;product=LysR family transcriptional regulator;protein_id=WP_014230353.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1497895 1498086 . - . ID=gene-PHA56_RS07240;Name=PHA56_RS07240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS07240;old_locus_tag=PHA56_07240 NZ_CP116214.1 Protein Homology CDS 1497895 1498086 . - 0 ID=cds-WP_009654356.1;Parent=gene-PHA56_RS07240;Dbxref=Genbank:WP_009654356.1;Name=WP_009654356.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009654356.1;locus_tag=PHA56_RS07240;product=YfgG family protein;protein_id=WP_009654356.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1498457 1500676 . + . ID=gene-PHA56_RS07245;Name=PHA56_RS07245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS07245;old_locus_tag=PHA56_07245 NZ_CP116214.1 Protein Homology CDS 1498457 1500676 . + 0 ID=cds-WP_014230351.1;Parent=gene-PHA56_RS07245;Dbxref=Genbank:WP_014230351.1;Name=WP_014230351.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014230351.1;locus_tag=PHA56_RS07245;product=EAL domain-containing protein;protein_id=WP_014230351.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1500716 1502257 . - . ID=gene-PHA56_RS07250;Name=ppx;gbkey=Gene;gene=ppx;gene_biotype=protein_coding;locus_tag=PHA56_RS07250;old_locus_tag=PHA56_07250 NZ_CP116214.1 Protein Homology CDS 1500716 1502257 . - 0 ID=cds-WP_004853121.1;Parent=gene-PHA56_RS07250;Dbxref=Genbank:WP_004853121.1;Name=WP_004853121.1;Ontology_term=GO:0006798,GO:0000287,GO:0004309;gbkey=CDS;gene=ppx;go_function=magnesium ion binding|0000287||IEA,exopolyphosphatase activity|0004309||IEA;go_process=polyphosphate catabolic process|0006798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004114392.1;locus_tag=PHA56_RS07250;product=exopolyphosphatase;protein_id=WP_004853121.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1502261 1504321 . - . ID=gene-PHA56_RS07255;Name=ppk1;gbkey=Gene;gene=ppk1;gene_biotype=protein_coding;locus_tag=PHA56_RS07255;old_locus_tag=PHA56_07255 NZ_CP116214.1 Protein Homology CDS 1502261 1504321 . - 0 ID=cds-WP_004123499.1;Parent=gene-PHA56_RS07255;Dbxref=Genbank:WP_004123499.1;Name=WP_004123499.1;Ontology_term=GO:0006799,GO:0008976,GO:0009358;gbkey=CDS;gene=ppk1;go_component=polyphosphate kinase complex|0009358||IEA;go_function=polyphosphate kinase activity|0008976||IEA;go_process=polyphosphate biosynthetic process|0006799||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228199.1;locus_tag=PHA56_RS07255;product=polyphosphate kinase 1;protein_id=WP_004123499.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1504499 1506172 . + . ID=gene-PHA56_RS07260;Name=PHA56_RS07260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS07260;old_locus_tag=PHA56_07260 NZ_CP116214.1 Protein Homology CDS 1504499 1506172 . + 0 ID=cds-WP_094909357.1;Parent=gene-PHA56_RS07260;Dbxref=Genbank:WP_094909357.1;Name=WP_094909357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014230350.1;locus_tag=PHA56_RS07260;product=hypothetical protein;protein_id=WP_094909357.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1506176 1507273 . - . ID=gene-PHA56_RS07265;Name=PHA56_RS07265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS07265;old_locus_tag=PHA56_07265 NZ_CP116214.1 Protein Homology CDS 1506176 1507273 . - 0 ID=cds-WP_004853118.1;Parent=gene-PHA56_RS07265;Dbxref=Genbank:WP_004853118.1;Name=WP_004853118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004136485.1;locus_tag=PHA56_RS07265;product=glycoside hydrolase family 88 protein;protein_id=WP_004853118.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1507248 1508702 . - . ID=gene-PHA56_RS07270;Name=PHA56_RS07270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS07270;old_locus_tag=PHA56_07270 NZ_CP116214.1 Protein Homology CDS 1507248 1508702 . - 0 ID=cds-WP_014230349.1;Parent=gene-PHA56_RS07270;Dbxref=Genbank:WP_014230349.1;Name=WP_014230349.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015703155.1;locus_tag=PHA56_RS07270;product=MFS transporter;protein_id=WP_014230349.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1509125 1510483 . + . ID=gene-PHA56_RS07275;Name=PHA56_RS07275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS07275;old_locus_tag=PHA56_07275 NZ_CP116214.1 Protein Homology CDS 1509125 1510483 . + 0 ID=cds-WP_014839190.1;Parent=gene-PHA56_RS07275;Dbxref=Genbank:WP_014839190.1;Name=WP_014839190.1;Ontology_term=GO:0005975,GO:0004650;gbkey=CDS;go_function=polygalacturonase activity|0004650||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014230348.1;locus_tag=PHA56_RS07275;product=glycosyl hydrolase family 28 protein;protein_id=WP_014839190.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1510527 1511168 . - . ID=gene-PHA56_RS07280;Name=purN;gbkey=Gene;gene=purN;gene_biotype=protein_coding;locus_tag=PHA56_RS07280;old_locus_tag=PHA56_07280 NZ_CP116214.1 Protein Homology CDS 1510527 1511168 . - 0 ID=cds-WP_014230347.1;Parent=gene-PHA56_RS07280;Dbxref=Genbank:WP_014230347.1;Name=WP_014230347.1;Ontology_term=GO:0009152,GO:0004644;gbkey=CDS;gene=purN;go_function=phosphoribosylglycinamide formyltransferase activity|0004644||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228198.1;locus_tag=PHA56_RS07280;product=phosphoribosylglycinamide formyltransferase;protein_id=WP_014230347.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1511165 1512202 . - . ID=gene-PHA56_RS07285;Name=purM;gbkey=Gene;gene=purM;gene_biotype=protein_coding;locus_tag=PHA56_RS07285;old_locus_tag=PHA56_07285 NZ_CP116214.1 Protein Homology CDS 1511165 1512202 . - 0 ID=cds-WP_049114485.1;Parent=gene-PHA56_RS07285;Dbxref=Genbank:WP_049114485.1;Name=WP_049114485.1;Ontology_term=GO:0006189,GO:0009152,GO:0004641;gbkey=CDS;gene=purM;go_function=phosphoribosylformylglycinamidine cyclo-ligase activity|0004641||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001656828.1;locus_tag=PHA56_RS07285;product=phosphoribosylformylglycinamidine cyclo-ligase;protein_id=WP_049114485.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1512468 1513361 . + . ID=gene-PHA56_RS07290;Name=PHA56_RS07290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS07290;old_locus_tag=PHA56_07290 NZ_CP116214.1 Protein Homology CDS 1512468 1513361 . + 0 ID=cds-WP_014839187.1;Parent=gene-PHA56_RS07290;Dbxref=Genbank:WP_014839187.1;Name=WP_014839187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009654911.1;locus_tag=PHA56_RS07290;product=ROK family protein;protein_id=WP_014839187.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1513371 1514801 . + . ID=gene-PHA56_RS07295;Name=PHA56_RS07295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS07295;old_locus_tag=PHA56_07295 NZ_CP116214.1 Protein Homology CDS 1513371 1514801 . + 0 ID=cds-WP_025106615.1;Parent=gene-PHA56_RS07295;Dbxref=Genbank:WP_025106615.1;Name=WP_025106615.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008460019.1;locus_tag=PHA56_RS07295;product=6-phospho-beta-glucosidase;protein_id=WP_025106615.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1514984 1515610 . + . ID=gene-PHA56_RS07300;Name=upp;gbkey=Gene;gene=upp;gene_biotype=protein_coding;locus_tag=PHA56_RS07300;old_locus_tag=PHA56_07300 NZ_CP116214.1 Protein Homology CDS 1514984 1515610 . + 0 ID=cds-WP_004123492.1;Parent=gene-PHA56_RS07300;Dbxref=Genbank:WP_004123492.1;Name=WP_004123492.1;Ontology_term=GO:0009116,GO:0004845;gbkey=CDS;gene=upp;go_function=uracil phosphoribosyltransferase activity|0004845||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001295473.1;locus_tag=PHA56_RS07300;product=uracil phosphoribosyltransferase;protein_id=WP_004123492.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1515706 1516995 . + . ID=gene-PHA56_RS07305;Name=uraA;gbkey=Gene;gene=uraA;gene_biotype=protein_coding;locus_tag=PHA56_RS07305;old_locus_tag=PHA56_07305 NZ_CP116214.1 Protein Homology CDS 1515706 1516995 . + 0 ID=cds-WP_004853099.1;Parent=gene-PHA56_RS07305;Dbxref=Genbank:WP_004853099.1;Name=WP_004853099.1;Ontology_term=GO:0022857;gbkey=CDS;gene=uraA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004136499.1;locus_tag=PHA56_RS07305;product=uracil permease;protein_id=WP_004853099.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1517091 1517792 . + . ID=gene-PHA56_RS07310;Name=PHA56_RS07310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS07310;old_locus_tag=PHA56_07310 NZ_CP116214.1 Protein Homology CDS 1517091 1517792 . + 0 ID=cds-WP_211800913.1;Parent=gene-PHA56_RS07310;Dbxref=Genbank:WP_211800913.1;Name=WP_211800913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416991.2;locus_tag=PHA56_RS07310;product=DnaA inactivator Hda;protein_id=WP_211800913.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1517819 1518178 . - . ID=gene-PHA56_RS07315;Name=arsC;gbkey=Gene;gene=arsC;gene_biotype=protein_coding;locus_tag=PHA56_RS07315;old_locus_tag=PHA56_07315 NZ_CP116214.1 Protein Homology CDS 1517819 1518178 . - 0 ID=cds-WP_004853095.1;Parent=gene-PHA56_RS07315;Dbxref=Genbank:WP_004853095.1;Name=WP_004853095.1;Note=This arsenate reductase requires both glutathione and glutaredoxin to convert arsenate to arsenite%2C after which the efflux transporter formed by ArsA and ArsB can extrude the arsenite from the cell%2C providing resistance.;Ontology_term=GO:0008794;gbkey=CDS;gene=arsC;go_function=arsenate reductase (glutaredoxin) activity|0008794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228190.1;locus_tag=PHA56_RS07315;product=arsenate reductase (glutaredoxin);protein_id=WP_004853095.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1518188 1519651 . - . ID=gene-PHA56_RS07320;Name=bepA;gbkey=Gene;gene=bepA;gene_biotype=protein_coding;locus_tag=PHA56_RS07320;old_locus_tag=PHA56_07320 NZ_CP116214.1 Protein Homology CDS 1518188 1519651 . - 0 ID=cds-WP_004853093.1;Parent=gene-PHA56_RS07320;Dbxref=Genbank:WP_004853093.1;Name=WP_004853093.1;gbkey=CDS;gene=bepA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228189.1;locus_tag=PHA56_RS07320;product=beta-barrel assembly-enhancing protease;protein_id=WP_004853093.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1519881 1520948 . + . ID=gene-PHA56_RS07325;Name=PHA56_RS07325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS07325;old_locus_tag=PHA56_07325 NZ_CP116214.1 Protein Homology CDS 1519881 1520948 . + 0 ID=cds-WP_004123481.1;Parent=gene-PHA56_RS07325;Dbxref=Genbank:WP_004123481.1;Name=WP_004123481.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004136507.1;locus_tag=PHA56_RS07325;product=AI-2E family transporter;protein_id=WP_004123481.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1521027 1521497 . - . ID=gene-PHA56_RS07330;Name=bcp;gbkey=Gene;gene=bcp;gene_biotype=protein_coding;locus_tag=PHA56_RS07330;old_locus_tag=PHA56_07330 NZ_CP116214.1 Protein Homology CDS 1521027 1521497 . - 0 ID=cds-WP_004104423.1;Parent=gene-PHA56_RS07330;Dbxref=Genbank:WP_004104423.1;Name=WP_004104423.1;Ontology_term=GO:0016209,GO:0016491;gbkey=CDS;gene=bcp;go_function=antioxidant activity|0016209||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228186.1;locus_tag=PHA56_RS07330;product=thioredoxin-dependent thiol peroxidase;protein_id=WP_004104423.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1521501 1522070 . - . ID=gene-PHA56_RS07335;Name=PHA56_RS07335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS07335;old_locus_tag=PHA56_07335 NZ_CP116214.1 Protein Homology CDS 1521501 1522070 . - 0 ID=cds-WP_004123480.1;Parent=gene-PHA56_RS07335;Dbxref=Genbank:WP_004123480.1;Name=WP_004123480.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228185.1;locus_tag=PHA56_RS07335;product=glycine cleavage system transcriptional repressor;protein_id=WP_004123480.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1522224 1523102 . + . ID=gene-PHA56_RS07340;Name=dapA;gbkey=Gene;gene=dapA;gene_biotype=protein_coding;locus_tag=PHA56_RS07340;old_locus_tag=PHA56_07340 NZ_CP116214.1 Protein Homology CDS 1522224 1523102 . + 0 ID=cds-WP_004853086.1;Parent=gene-PHA56_RS07340;Dbxref=Genbank:WP_004853086.1;Name=WP_004853086.1;Ontology_term=GO:0009089,GO:0008840;gbkey=CDS;gene=dapA;go_function=4-hydroxy-tetrahydrodipicolinate synthase activity|0008840||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001311023.1;locus_tag=PHA56_RS07340;product=4-hydroxy-tetrahydrodipicolinate synthase;protein_id=WP_004853086.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1523119 1524153 . + . ID=gene-PHA56_RS07345;Name=bamC;gbkey=Gene;gene=bamC;gene_biotype=protein_coding;locus_tag=PHA56_RS07345;old_locus_tag=PHA56_07345 NZ_CP116214.1 Protein Homology CDS 1523119 1524153 . + 0 ID=cds-WP_004853085.1;Parent=gene-PHA56_RS07345;Dbxref=Genbank:WP_004853085.1;Name=WP_004853085.1;gbkey=CDS;gene=bamC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228183.1;locus_tag=PHA56_RS07345;product=outer membrane protein assembly factor BamC;protein_id=WP_004853085.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1524262 1524975 . + . ID=gene-PHA56_RS07350;Name=PHA56_RS07350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS07350;old_locus_tag=PHA56_07350 NZ_CP116214.1 Protein Homology CDS 1524262 1524975 . + 0 ID=cds-WP_004104417.1;Parent=gene-PHA56_RS07350;Dbxref=Genbank:WP_004104417.1;Name=WP_004104417.1;Ontology_term=GO:0006164,GO:0004639;gbkey=CDS;go_function=phosphoribosylaminoimidazolesuccinocarboxamide synthase activity|0004639||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017458944.1;locus_tag=PHA56_RS07350;product=phosphoribosylaminoimidazolesuccinocarboxamide synthase;protein_id=WP_004104417.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1525096 1525962 . + . ID=gene-PHA56_RS07355;Name=PHA56_RS07355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS07355;old_locus_tag=PHA56_07355 NZ_CP116214.1 Protein Homology CDS 1525096 1525962 . + 0 ID=cds-WP_032720525.1;Parent=gene-PHA56_RS07355;Dbxref=Genbank:WP_032720525.1;Name=WP_032720525.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228181.1;locus_tag=PHA56_RS07355;product=neutral zinc metallopeptidase;protein_id=WP_032720525.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1525975 1527975 . + . ID=gene-PHA56_RS07360;Name=PHA56_RS07360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS07360;old_locus_tag=PHA56_07360 NZ_CP116214.1 Protein Homology CDS 1525975 1527975 . + 0 ID=cds-WP_014230342.1;Parent=gene-PHA56_RS07360;Dbxref=Genbank:WP_014230342.1;Name=WP_014230342.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009654881.1;locus_tag=PHA56_RS07360;product=GNAT family N-acetyltransferase;protein_id=WP_014230342.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1528053 1528751 . + . ID=gene-PHA56_RS07365;Name=ypfH;gbkey=Gene;gene=ypfH;gene_biotype=protein_coding;locus_tag=PHA56_RS07365;old_locus_tag=PHA56_07365 NZ_CP116214.1 Protein Homology CDS 1528053 1528751 . + 0 ID=cds-WP_032720524.1;Parent=gene-PHA56_RS07365;Dbxref=Genbank:WP_032720524.1;Name=WP_032720524.1;Ontology_term=GO:0016787;gbkey=CDS;gene=ypfH;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228178.1;locus_tag=PHA56_RS07365;product=esterase;protein_id=WP_032720524.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1529092 1529295 . - . ID=gene-PHA56_RS07370;Name=PHA56_RS07370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS07370;old_locus_tag=PHA56_07370 NZ_CP116214.1 Protein Homology CDS 1529092 1529295 . - 0 ID=cds-WP_004123464.1;Parent=gene-PHA56_RS07370;Dbxref=Genbank:WP_004123464.1;Name=WP_004123464.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004104407.1;locus_tag=PHA56_RS07370;product=YpfN family protein;protein_id=WP_004123464.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1529323 1530450 . - . ID=gene-PHA56_RS07375;Name=dapE;gbkey=Gene;gene=dapE;gene_biotype=protein_coding;locus_tag=PHA56_RS07375;old_locus_tag=PHA56_07375 NZ_CP116214.1 Protein Homology CDS 1529323 1530450 . - 0 ID=cds-WP_004853076.1;Parent=gene-PHA56_RS07375;Dbxref=Genbank:WP_004853076.1;Name=WP_004853076.1;Ontology_term=GO:0009089,GO:0009014;gbkey=CDS;gene=dapE;go_function=succinyl-diaminopimelate desuccinylase activity|0009014||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020078199.1;locus_tag=PHA56_RS07375;product=succinyl-diaminopimelate desuccinylase;protein_id=WP_004853076.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1530454 1530807 . - . ID=gene-PHA56_RS07380;Name=PHA56_RS07380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS07380;old_locus_tag=PHA56_07380 NZ_CP116214.1 Protein Homology CDS 1530454 1530807 . - 0 ID=cds-WP_004853073.1;Parent=gene-PHA56_RS07380;Dbxref=Genbank:WP_004853073.1;Name=WP_004853073.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228175.1;locus_tag=PHA56_RS07380;product=ArsC family reductase;protein_id=WP_004853073.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1531194 1531253 . + . ID=gene-PHA56_RS07385;Name=ypfM;gbkey=Gene;gene=ypfM;gene_biotype=protein_coding;locus_tag=PHA56_RS07385;old_locus_tag=PHA56_07385 NZ_CP116214.1 Protein Homology CDS 1531194 1531253 . + 0 ID=cds-WP_100181659.1;Parent=gene-PHA56_RS07385;Dbxref=Genbank:WP_100181659.1;Name=WP_100181659.1;gbkey=CDS;gene=ypfM;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165325.1;locus_tag=PHA56_RS07385;product=protein YpfM;protein_id=WP_100181659.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1531391 1534504 . - . ID=gene-PHA56_RS07390;Name=acrD;gbkey=Gene;gene=acrD;gene_biotype=protein_coding;locus_tag=PHA56_RS07390;old_locus_tag=PHA56_07390 NZ_CP116214.1 Protein Homology CDS 1531391 1534504 . - 0 ID=cds-WP_004853071.1;Parent=gene-PHA56_RS07390;Dbxref=Genbank:WP_004853071.1;Name=WP_004853071.1;Ontology_term=GO:0042908,GO:0015562;gbkey=CDS;gene=acrD;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=xenobiotic transport|0042908||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228174.1;locus_tag=PHA56_RS07390;product=multidrug efflux RND transporter permease AcrD;protein_id=WP_004853071.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1534886 1536850 . + . ID=gene-PHA56_RS07395;Name=aegA;gbkey=Gene;gene=aegA;gene_biotype=protein_coding;locus_tag=PHA56_RS07395;old_locus_tag=PHA56_07395 NZ_CP116214.1 Protein Homology CDS 1534886 1536850 . + 0 ID=cds-WP_032720523.1;Parent=gene-PHA56_RS07395;Dbxref=Genbank:WP_032720523.1;Name=WP_032720523.1;Ontology_term=GO:0016491;gbkey=CDS;gene=aegA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228173.1;locus_tag=PHA56_RS07395;product=formate-dependent uric acid utilization protein AegA;protein_id=WP_032720523.1;transl_table=11 NZ_CP116214.1 RefSeq pseudogene 1536909 1537506 . + . ID=gene-PHA56_RS07400;Name=nudK;gbkey=Gene;gene=nudK;gene_biotype=pseudogene;locus_tag=PHA56_RS07400;old_locus_tag=PHA56_07400;pseudo=true NZ_CP116214.1 Protein Homology CDS 1536909 1537506 . + 0 ID=cds-PHA56_RS07400;Parent=gene-PHA56_RS07400;Note=frameshifted;Ontology_term=GO:0016818,GO:0046872;gbkey=CDS;gene=nudK;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228172.1;locus_tag=PHA56_RS07400;product=GDP-mannose pyrophosphatase NudK;pseudo=true;transl_table=11 NZ_CP116214.1 RefSeq gene 1537572 1538639 . + . ID=gene-PHA56_RS07405;Name=PHA56_RS07405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS07405;old_locus_tag=PHA56_07405 NZ_CP116214.1 Protein Homology CDS 1537572 1538639 . + 0 ID=cds-WP_032720557.1;Parent=gene-PHA56_RS07405;Dbxref=Genbank:WP_032720557.1;Name=WP_032720557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004853068.1;locus_tag=PHA56_RS07405;product=DUF1176 domain-containing protein;protein_id=WP_032720557.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1538608 1540602 . - . ID=gene-PHA56_RS07410;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=PHA56_RS07410;old_locus_tag=PHA56_07410 NZ_CP116214.1 Protein Homology CDS 1538608 1540602 . - 0 ID=cds-WP_014230336.1;Parent=gene-PHA56_RS07410;Dbxref=Genbank:WP_014230336.1;Name=WP_014230336.1;Ontology_term=GO:0006098,GO:0004802,GO:0005737;gbkey=CDS;gene=tkt;go_component=cytoplasm|0005737||IEA;go_function=transketolase activity|0004802||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228169.1;locus_tag=PHA56_RS07410;product=transketolase;protein_id=WP_014230336.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1540892 1543171 . + . ID=gene-PHA56_RS07415;Name=maeB;gbkey=Gene;gene=maeB;gene_biotype=protein_coding;locus_tag=PHA56_RS07415;old_locus_tag=PHA56_07415 NZ_CP116214.1 Protein Homology CDS 1540892 1543171 . + 0 ID=cds-WP_004853066.1;Parent=gene-PHA56_RS07415;Dbxref=Genbank:WP_004853066.1;Name=WP_004853066.1;gbkey=CDS;gene=maeB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228167.1;locus_tag=PHA56_RS07415;product=NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase;protein_id=WP_004853066.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1543331 1543666 . + . ID=gene-PHA56_RS07420;Name=eutS;gbkey=Gene;gene=eutS;gene_biotype=protein_coding;locus_tag=PHA56_RS07420;old_locus_tag=PHA56_07420 NZ_CP116214.1 Protein Homology CDS 1543331 1543666 . + 0 ID=cds-WP_004123425.1;Parent=gene-PHA56_RS07420;Dbxref=Genbank:WP_004123425.1;Name=WP_004123425.1;gbkey=CDS;gene=eutS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228166.1;locus_tag=PHA56_RS07420;product=ethanolamine utilization microcompartment protein EutS;protein_id=WP_004123425.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1543679 1544158 . + . ID=gene-PHA56_RS07425;Name=eutP;gbkey=Gene;gene=eutP;gene_biotype=protein_coding;locus_tag=PHA56_RS07425;old_locus_tag=PHA56_07425 NZ_CP116214.1 Protein Homology CDS 1543679 1544158 . + 0 ID=cds-WP_032693119.1;Parent=gene-PHA56_RS07425;Dbxref=Genbank:WP_032693119.1;Name=WP_032693119.1;gbkey=CDS;gene=eutP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461404.1;locus_tag=PHA56_RS07425;product=ethanolamine utilization acetate kinase EutP;protein_id=WP_032693119.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1544136 1544828 . + . ID=gene-PHA56_RS07430;Name=eutQ;gbkey=Gene;gene=eutQ;gene_biotype=protein_coding;locus_tag=PHA56_RS07430;old_locus_tag=PHA56_07430 NZ_CP116214.1 Protein Homology CDS 1544136 1544828 . + 0 ID=cds-WP_014230335.1;Parent=gene-PHA56_RS07430;Dbxref=Genbank:WP_014230335.1;Name=WP_014230335.1;gbkey=CDS;gene=eutQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416955.1;locus_tag=PHA56_RS07430;product=ethanolamine utilization acetate kinase EutQ;protein_id=WP_014230335.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1544825 1545628 . + . ID=gene-PHA56_RS07435;Name=eutT;gbkey=Gene;gene=eutT;gene_biotype=protein_coding;locus_tag=PHA56_RS07435;old_locus_tag=PHA56_07435 NZ_CP116214.1 Protein Homology CDS 1544825 1545628 . + 0 ID=cds-WP_014839175.1;Parent=gene-PHA56_RS07435;Dbxref=Genbank:WP_014839175.1;Name=WP_014839175.1;Ontology_term=GO:0006580,GO:0008817;gbkey=CDS;gene=eutT;go_function=corrinoid adenosyltransferase activity|0008817||IEA;go_process=ethanolamine metabolic process|0006580||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004104392.1;locus_tag=PHA56_RS07435;product=ethanolamine utilization cob(I)yrinic acid a%2Cc-diamide adenosyltransferase EutT;protein_id=WP_014839175.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1545625 1546641 . + . ID=gene-PHA56_RS07440;Name=pta;gbkey=Gene;gene=pta;gene_biotype=protein_coding;locus_tag=PHA56_RS07440;old_locus_tag=PHA56_07440 NZ_CP116214.1 Protein Homology CDS 1545625 1546641 . + 0 ID=cds-WP_014230333.1;Parent=gene-PHA56_RS07440;Dbxref=Genbank:WP_014230333.1;Name=WP_014230333.1;Ontology_term=GO:0006086,GO:0008959;gbkey=CDS;gene=pta;go_function=phosphate acetyltransferase activity|0008959||IEA;go_process=acetyl-CoA biosynthetic process from pyruvate|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461401.1;locus_tag=PHA56_RS07440;product=phosphate acetyltransferase;protein_id=WP_014230333.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1546683 1546973 . + . ID=gene-PHA56_RS07445;Name=eutM;gbkey=Gene;gene=eutM;gene_biotype=protein_coding;locus_tag=PHA56_RS07445;old_locus_tag=PHA56_07445 NZ_CP116214.1 Protein Homology CDS 1546683 1546973 . + 0 ID=cds-WP_000387720.1;Parent=gene-PHA56_RS07445;Dbxref=Genbank:WP_000387720.1;Name=WP_000387720.1;gbkey=CDS;gene=eutM;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228161.1;locus_tag=PHA56_RS07445;product=ethanolamine utilization microcompartment protein EutM;protein_id=WP_000387720.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1547088 1547375 . + . ID=gene-PHA56_RS07450;Name=eutN;gbkey=Gene;gene=eutN;gene_biotype=protein_coding;locus_tag=PHA56_RS07450;old_locus_tag=PHA56_07450 NZ_CP116214.1 Protein Homology CDS 1547088 1547375 . + 0 ID=cds-WP_004853058.1;Parent=gene-PHA56_RS07450;Dbxref=Genbank:WP_004853058.1;Name=WP_004853058.1;gbkey=CDS;gene=eutN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311345.1;locus_tag=PHA56_RS07450;product=ethanolamine utilization microcompartment protein EutN;protein_id=WP_004853058.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1547387 1548790 . + . ID=gene-PHA56_RS07455;Name=PHA56_RS07455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS07455;old_locus_tag=PHA56_07455 NZ_CP116214.1 Protein Homology CDS 1547387 1548790 . + 0 ID=cds-WP_004853056.1;Parent=gene-PHA56_RS07455;Dbxref=Genbank:WP_004853056.1;Name=WP_004853056.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461398.1;locus_tag=PHA56_RS07455;product=aldehyde dehydrogenase EutE;protein_id=WP_004853056.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1548801 1549640 . + . ID=gene-PHA56_RS07460;Name=eutJ;gbkey=Gene;gene=eutJ;gene_biotype=protein_coding;locus_tag=PHA56_RS07460;old_locus_tag=PHA56_07460 NZ_CP116214.1 Protein Homology CDS 1548801 1549640 . + 0 ID=cds-WP_032693109.1;Parent=gene-PHA56_RS07460;Dbxref=Genbank:WP_032693109.1;Name=WP_032693109.1;Ontology_term=GO:0051301,GO:0005515;gbkey=CDS;gene=eutJ;go_function=protein binding|0005515||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461397.1;locus_tag=PHA56_RS07460;product=ethanolamine utilization protein EutJ;protein_id=WP_032693109.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1549630 1550817 . + . ID=gene-PHA56_RS07465;Name=eutG;gbkey=Gene;gene=eutG;gene_biotype=protein_coding;locus_tag=PHA56_RS07465;old_locus_tag=PHA56_07465 NZ_CP116214.1 Protein Homology CDS 1549630 1550817 . + 0 ID=cds-WP_032693107.1;Parent=gene-PHA56_RS07465;Dbxref=Genbank:WP_032693107.1;Name=WP_032693107.1;Ontology_term=GO:0016491;gbkey=CDS;gene=eutG;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228157.1;locus_tag=PHA56_RS07465;product=ethanolamine utilization ethanol dehydrogenase EutG;protein_id=WP_032693107.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1551012 1552244 . + . ID=gene-PHA56_RS07470;Name=eutH;gbkey=Gene;gene=eutH;gene_biotype=protein_coding;locus_tag=PHA56_RS07470;old_locus_tag=PHA56_07470 NZ_CP116214.1 Protein Homology CDS 1551012 1552244 . + 0 ID=cds-WP_025106627.1;Parent=gene-PHA56_RS07470;Dbxref=Genbank:WP_025106627.1;Name=WP_025106627.1;Ontology_term=GO:0034229,GO:0034228,GO:0016020;gbkey=CDS;gene=eutH;go_component=membrane|0016020||IEA;go_function=ethanolamine transmembrane transporter activity|0034228||IEA;go_process=ethanolamine transport|0034229||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228156.1;locus_tag=PHA56_RS07470;product=ethanolamine utilization protein EutH;protein_id=WP_025106627.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1552241 1553644 . + . ID=gene-PHA56_RS07475;Name=eutA;gbkey=Gene;gene=eutA;gene_biotype=protein_coding;locus_tag=PHA56_RS07475;old_locus_tag=PHA56_07475 NZ_CP116214.1 Protein Homology CDS 1552241 1553644 . + 0 ID=cds-WP_076752360.1;Parent=gene-PHA56_RS07475;Dbxref=Genbank:WP_076752360.1;Name=WP_076752360.1;gbkey=CDS;gene=eutA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461394.1;locus_tag=PHA56_RS07475;product=ethanolamine ammonia-lyase reactivating factor EutA;protein_id=WP_076752360.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1553656 1555017 . + . ID=gene-PHA56_RS07480;Name=eutB;gbkey=Gene;gene=eutB;gene_biotype=protein_coding;locus_tag=PHA56_RS07480;old_locus_tag=PHA56_07480 NZ_CP116214.1 Protein Homology CDS 1553656 1555017 . + 0 ID=cds-WP_004104373.1;Parent=gene-PHA56_RS07480;Dbxref=Genbank:WP_004104373.1;Name=WP_004104373.1;gbkey=CDS;gene=eutB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228154.1;locus_tag=PHA56_RS07480;product=ethanolamine ammonia-lyase subunit alpha;protein_id=WP_004104373.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1555038 1555931 . + . ID=gene-PHA56_RS07485;Name=eutC;gbkey=Gene;gene=eutC;gene_biotype=protein_coding;locus_tag=PHA56_RS07485;old_locus_tag=PHA56_07485 NZ_CP116214.1 Protein Homology CDS 1555038 1555931 . + 0 ID=cds-WP_032693169.1;Parent=gene-PHA56_RS07485;Dbxref=Genbank:WP_032693169.1;Name=WP_032693169.1;Ontology_term=GO:0006520,GO:0008851;gbkey=CDS;gene=eutC;go_function=ethanolamine ammonia-lyase activity|0008851||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461392.1;locus_tag=PHA56_RS07485;product=ethanolamine ammonia-lyase subunit EutC;protein_id=WP_032693169.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1555941 1556600 . + . ID=gene-PHA56_RS07490;Name=eutL;gbkey=Gene;gene=eutL;gene_biotype=protein_coding;locus_tag=PHA56_RS07490;old_locus_tag=PHA56_07490 NZ_CP116214.1 Protein Homology CDS 1555941 1556600 . + 0 ID=cds-WP_004853042.1;Parent=gene-PHA56_RS07490;Dbxref=Genbank:WP_004853042.1;Name=WP_004853042.1;Ontology_term=GO:0005198,GO:0031469;gbkey=CDS;gene=eutL;go_component=bacterial microcompartment|0031469||IEA;go_function=structural molecule activity|0005198||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461391.1;locus_tag=PHA56_RS07490;product=ethanolamine utilization microcompartment protein EutL;protein_id=WP_004853042.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1556611 1557093 . + . ID=gene-PHA56_RS07495;Name=eutK;gbkey=Gene;gene=eutK;gene_biotype=protein_coding;locus_tag=PHA56_RS07495;old_locus_tag=PHA56_07495 NZ_CP116214.1 Protein Homology CDS 1556611 1557093 . + 0 ID=cds-WP_014230327.1;Parent=gene-PHA56_RS07495;Dbxref=Genbank:WP_014230327.1;Name=WP_014230327.1;gbkey=CDS;gene=eutK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461390.1;locus_tag=PHA56_RS07495;product=ethanolamine utilization microcompartment protein EutK;protein_id=WP_014230327.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1557142 1558194 . + . ID=gene-PHA56_RS07500;Name=eutR;gbkey=Gene;gene=eutR;gene_biotype=protein_coding;locus_tag=PHA56_RS07500;old_locus_tag=PHA56_07500 NZ_CP116214.1 Protein Homology CDS 1557142 1558194 . + 0 ID=cds-WP_032720556.1;Parent=gene-PHA56_RS07500;Dbxref=Genbank:WP_032720556.1;Name=WP_032720556.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=eutR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121920.1;locus_tag=PHA56_RS07500;product=HTH-type transcriptional regulator EutR;protein_id=WP_032720556.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1558309 1559208 . - . ID=gene-PHA56_RS07505;Name=hemF;gbkey=Gene;gene=hemF;gene_biotype=protein_coding;locus_tag=PHA56_RS07505;old_locus_tag=PHA56_07505 NZ_CP116214.1 Protein Homology CDS 1558309 1559208 . - 0 ID=cds-WP_014839170.1;Parent=gene-PHA56_RS07505;Dbxref=Genbank:WP_014839170.1;Name=WP_014839170.1;Ontology_term=GO:0006779,GO:0004109;gbkey=CDS;gene=hemF;go_function=coproporphyrinogen oxidase activity|0004109||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461386.1;locus_tag=PHA56_RS07505;product=oxygen-dependent coproporphyrinogen oxidase;protein_id=WP_014839170.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1559208 1560083 . - . ID=gene-PHA56_RS07510;Name=amiA;gbkey=Gene;gene=amiA;gene_biotype=protein_coding;locus_tag=PHA56_RS07510;old_locus_tag=PHA56_07510 NZ_CP116214.1 Protein Homology CDS 1559208 1560083 . - 0 ID=cds-WP_004870750.1;Parent=gene-PHA56_RS07510;Dbxref=Genbank:WP_004870750.1;Name=WP_004870750.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=amiA;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228148.1;locus_tag=PHA56_RS07510;product=N-acetylmuramoyl-L-alanine amidase AmiA;protein_id=WP_004870750.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1560295 1560720 . + . ID=gene-PHA56_RS07515;Name=PHA56_RS07515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS07515;old_locus_tag=PHA56_07515 NZ_CP116214.1 Protein Homology CDS 1560295 1560720 . + 0 ID=cds-WP_004853033.1;Parent=gene-PHA56_RS07515;Dbxref=Genbank:WP_004853033.1;Name=WP_004853033.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228147.1;locus_tag=PHA56_RS07515;product=GNAT family acetyltransferase;protein_id=WP_004853033.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1560707 1561156 . + . ID=gene-PHA56_RS07520;Name=PHA56_RS07520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS07520;old_locus_tag=PHA56_07520 NZ_CP116214.1 Protein Homology CDS 1560707 1561156 . + 0 ID=cds-WP_004853030.1;Parent=gene-PHA56_RS07520;Dbxref=Genbank:WP_004853030.1;Name=WP_004853030.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016809551.1;locus_tag=PHA56_RS07520;product=DUF2919 domain-containing protein;protein_id=WP_004853030.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1561220 1561795 . + . ID=gene-PHA56_RS07525;Name=PHA56_RS07525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS07525;old_locus_tag=PHA56_07525 NZ_CP116214.1 Protein Homology CDS 1561220 1561795 . + 0 ID=cds-WP_014839169.1;Parent=gene-PHA56_RS07525;Dbxref=Genbank:WP_014839169.1;Name=WP_014839169.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228145.1;locus_tag=PHA56_RS07525;product=RpoE-regulated lipoprotein;protein_id=WP_014839169.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1561889 1562788 . + . ID=gene-PHA56_RS07530;Name=PHA56_RS07530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS07530;old_locus_tag=PHA56_07530 NZ_CP116214.1 Protein Homology CDS 1561889 1562788 . + 0 ID=cds-WP_014839168.1;Parent=gene-PHA56_RS07530;Dbxref=Genbank:WP_014839168.1;Name=WP_014839168.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461381.1;locus_tag=PHA56_RS07530;product=Dyp-type peroxidase;protein_id=WP_014839168.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1563014 1564030 . + . ID=gene-PHA56_RS07535;Name=cysP;gbkey=Gene;gene=cysP;gene_biotype=protein_coding;locus_tag=PHA56_RS07535;old_locus_tag=PHA56_07535 NZ_CP116214.1 Protein Homology CDS 1563014 1564030 . + 0 ID=cds-WP_014230322.1;Parent=gene-PHA56_RS07535;Dbxref=Genbank:WP_014230322.1;Name=WP_014230322.1;gbkey=CDS;gene=cysP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228141.1;locus_tag=PHA56_RS07535;product=thiosulfate/sulfate ABC transporter substrate-binding protein CysP;protein_id=WP_014230322.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1564030 1564863 . + . ID=gene-PHA56_RS07540;Name=cysT;gbkey=Gene;gene=cysT;gene_biotype=protein_coding;locus_tag=PHA56_RS07540;old_locus_tag=PHA56_07540 NZ_CP116214.1 Protein Homology CDS 1564030 1564863 . + 0 ID=cds-WP_004123378.1;Parent=gene-PHA56_RS07540;Dbxref=Genbank:WP_004123378.1;Name=WP_004123378.1;Ontology_term=GO:0008272,GO:0055085,GO:0015419,GO:0016020;gbkey=CDS;gene=cysT;go_component=membrane|0016020||IEA;go_function=ABC-type sulfate transporter activity|0015419||IEA;go_process=sulfate transport|0008272||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000458418.1;locus_tag=PHA56_RS07540;product=sulfate/thiosulfate ABC transporter permease CysT;protein_id=WP_004123378.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1564863 1565738 . + . ID=gene-PHA56_RS07545;Name=cysW;gbkey=Gene;gene=cysW;gene_biotype=protein_coding;locus_tag=PHA56_RS07545;old_locus_tag=PHA56_07545 NZ_CP116214.1 Protein Homology CDS 1564863 1565738 . + 0 ID=cds-WP_014230321.1;Parent=gene-PHA56_RS07545;Dbxref=Genbank:WP_014230321.1;Name=WP_014230321.1;Ontology_term=GO:0008272,GO:0055085,GO:0015419,GO:0016020;gbkey=CDS;gene=cysW;go_component=membrane|0016020||IEA;go_function=ABC-type sulfate transporter activity|0015419||IEA;go_process=sulfate transport|0008272||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228139.1;locus_tag=PHA56_RS07545;product=sulfate/thiosulfate ABC transporter permease CysW;protein_id=WP_014230321.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1565728 1566822 . + . ID=gene-PHA56_RS07550;Name=cysA;gbkey=Gene;gene=cysA;gene_biotype=protein_coding;locus_tag=PHA56_RS07550;old_locus_tag=PHA56_07550 NZ_CP116214.1 Protein Homology CDS 1565728 1566822 . + 0 ID=cds-WP_014230320.1;Parent=gene-PHA56_RS07550;Dbxref=Genbank:WP_014230320.1;Name=WP_014230320.1;Ontology_term=GO:0008272,GO:0005524,GO:0015419,GO:0016020,GO:0043190;gbkey=CDS;gene=cysA;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type sulfate transporter activity|0015419||IEA;go_process=sulfate transport|0008272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416917.1;locus_tag=PHA56_RS07550;product=sulfate/thiosulfate ABC transporter ATP-binding protein CysA;protein_id=WP_014230320.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1566889 1567800 . + . ID=gene-PHA56_RS07555;Name=cysM;gbkey=Gene;gene=cysM;gene_biotype=protein_coding;locus_tag=PHA56_RS07555;old_locus_tag=PHA56_07555 NZ_CP116214.1 Protein Homology CDS 1566889 1567800 . + 0 ID=cds-WP_014230319.1;Parent=gene-PHA56_RS07555;Dbxref=Genbank:WP_014230319.1;Name=WP_014230319.1;Ontology_term=GO:0006535,GO:0004124;gbkey=CDS;gene=cysM;go_function=cysteine synthase activity|0004124||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228137.1;locus_tag=PHA56_RS07555;product=cysteine synthase CysM;protein_id=WP_014230319.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1567797 1568204 . - . ID=gene-PHA56_RS07560;Name=PHA56_RS07560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS07560;old_locus_tag=PHA56_07560 NZ_CP116214.1 Protein Homology CDS 1567797 1568204 . - 0 ID=cds-WP_014839165.1;Parent=gene-PHA56_RS07560;Dbxref=Genbank:WP_014839165.1;Name=WP_014839165.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004104344.1;locus_tag=PHA56_RS07560;product=DUF4440 domain-containing protein;protein_id=WP_014839165.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1568250 1568957 . - . ID=gene-PHA56_RS07565;Name=PHA56_RS07565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS07565;old_locus_tag=PHA56_07565 NZ_CP116214.1 Protein Homology CDS 1568250 1568957 . - 0 ID=cds-WP_038424762.1;Parent=gene-PHA56_RS07565;Dbxref=Genbank:WP_038424762.1;Name=WP_038424762.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004123368.1;locus_tag=PHA56_RS07565;product=type 1 glutamine amidotransferase;protein_id=WP_038424762.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1568972 1570270 . - . ID=gene-PHA56_RS07570;Name=ptsJ;gbkey=Gene;gene=ptsJ;gene_biotype=protein_coding;locus_tag=PHA56_RS07570;old_locus_tag=PHA56_07570 NZ_CP116214.1 Protein Homology CDS 1568972 1570270 . - 0 ID=cds-WP_076752359.1;Parent=gene-PHA56_RS07570;Dbxref=Genbank:WP_076752359.1;Name=WP_076752359.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ptsJ;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016809554.1;locus_tag=PHA56_RS07570;product=transcriptional regulator PtsJ;protein_id=WP_076752359.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1570353 1571219 . + . ID=gene-PHA56_RS07575;Name=pdxK;gbkey=Gene;gene=pdxK;gene_biotype=protein_coding;gene_synonym=thiJ;locus_tag=PHA56_RS07575;old_locus_tag=PHA56_07575 NZ_CP116214.1 Protein Homology CDS 1570353 1571219 . + 0 ID=cds-WP_032693092.1;Parent=gene-PHA56_RS07575;Dbxref=Genbank:WP_032693092.1;Name=WP_032693092.1;Ontology_term=GO:0009443,GO:0008478;gbkey=CDS;gene=pdxK;go_function=pyridoxal kinase activity|0008478||IEA;go_process=pyridoxal 5'-phosphate salvage|0009443||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004853005.1;locus_tag=PHA56_RS07575;product=pyridoxine/pyridoxal/pyridoxamine kinase;protein_id=WP_032693092.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1571216 1571455 . + . ID=gene-PHA56_RS07580;Name=PHA56_RS07580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS07580;old_locus_tag=PHA56_07580 NZ_CP116214.1 Protein Homology CDS 1571216 1571455 . + 0 ID=cds-WP_004104337.1;Parent=gene-PHA56_RS07580;Dbxref=Genbank:WP_004104337.1;Name=WP_004104337.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004104337.1;locus_tag=PHA56_RS07580;product=hypothetical protein;protein_id=WP_004104337.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1571497 1572006 . - . ID=gene-PHA56_RS07585;Name=crr;gbkey=Gene;gene=crr;gene_biotype=protein_coding;locus_tag=PHA56_RS07585;old_locus_tag=PHA56_07585 NZ_CP116214.1 Protein Homology CDS 1571497 1572006 . - 0 ID=cds-WP_000522253.1;Parent=gene-PHA56_RS07585;Dbxref=Genbank:WP_000522253.1;Name=WP_000522253.1;Ontology_term=GO:0009401;gbkey=CDS;gene=crr;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015833547.1;locus_tag=PHA56_RS07585;product=PTS glucose transporter subunit IIA;protein_id=WP_000522253.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1572049 1573776 . - . ID=gene-PHA56_RS07590;Name=ptsI;gbkey=Gene;gene=ptsI;gene_biotype=protein_coding;locus_tag=PHA56_RS07590;old_locus_tag=PHA56_07590 NZ_CP116214.1 Protein Homology CDS 1572049 1573776 . - 0 ID=cds-WP_032693091.1;Parent=gene-PHA56_RS07590;Dbxref=Genbank:WP_032693091.1;Name=WP_032693091.1;gbkey=CDS;gene=ptsI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004870786.1;locus_tag=PHA56_RS07590;product=phosphoenolpyruvate-protein phosphotransferase PtsI;protein_id=WP_032693091.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1573821 1574078 . - . ID=gene-PHA56_RS07595;Name=ptsH;gbkey=Gene;gene=ptsH;gene_biotype=protein_coding;locus_tag=PHA56_RS07595;old_locus_tag=PHA56_07595 NZ_CP116214.1 Protein Homology CDS 1573821 1574078 . - 0 ID=cds-WP_002913505.1;Parent=gene-PHA56_RS07595;Dbxref=Genbank:WP_002913505.1;Name=WP_002913505.1;gbkey=CDS;gene=ptsH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003038086.1;locus_tag=PHA56_RS07595;product=phosphocarrier protein Hpr;protein_id=WP_002913505.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1574460 1575431 . - . ID=gene-PHA56_RS07600;Name=cysK;gbkey=Gene;gene=cysK;gene_biotype=protein_coding;locus_tag=PHA56_RS07600;old_locus_tag=PHA56_07600 NZ_CP116214.1 Protein Homology CDS 1574460 1575431 . - 0 ID=cds-WP_004852997.1;Parent=gene-PHA56_RS07600;Dbxref=Genbank:WP_004852997.1;Name=WP_004852997.1;Ontology_term=GO:0006535,GO:0004124;gbkey=CDS;gene=cysK;go_function=cysteine synthase activity|0004124||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000034402.1;locus_tag=PHA56_RS07600;product=cysteine synthase A;protein_id=WP_004852997.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1575591 1576352 . - . ID=gene-PHA56_RS07605;Name=cysZ;gbkey=Gene;gene=cysZ;gene_biotype=protein_coding;locus_tag=PHA56_RS07605;old_locus_tag=PHA56_07605 NZ_CP116214.1 Protein Homology CDS 1575591 1576352 . - 0 ID=cds-WP_042945771.1;Parent=gene-PHA56_RS07605;Dbxref=Genbank:WP_042945771.1;Name=WP_042945771.1;Ontology_term=GO:0000103,GO:0015116,GO:0005886;gbkey=CDS;gene=cysZ;go_component=plasma membrane|0005886||IEA;go_function=sulfate transmembrane transporter activity|0015116||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228127.1;locus_tag=PHA56_RS07605;product=sulfate transporter CysZ;protein_id=WP_042945771.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1576583 1577596 . + . ID=gene-PHA56_RS07610;Name=zipA;gbkey=Gene;gene=zipA;gene_biotype=protein_coding;locus_tag=PHA56_RS07610;old_locus_tag=PHA56_07610 NZ_CP116214.1 Protein Homology CDS 1576583 1577596 . + 0 ID=cds-WP_032720511.1;Parent=gene-PHA56_RS07610;Dbxref=Genbank:WP_032720511.1;Name=WP_032720511.1;Ontology_term=GO:0000917,GO:0005515;gbkey=CDS;gene=zipA;go_function=protein binding|0005515||IEA;go_process=division septum assembly|0000917||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228125.1;locus_tag=PHA56_RS07610;product=cell division protein ZipA;protein_id=WP_032720511.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1577671 1579695 . + . ID=gene-PHA56_RS07615;Name=ligA;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;locus_tag=PHA56_RS07615;old_locus_tag=PHA56_07615 NZ_CP116214.1 Protein Homology CDS 1577671 1579695 . + 0 ID=cds-WP_032693084.1;Parent=gene-PHA56_RS07615;Dbxref=Genbank:WP_032693084.1;Name=WP_032693084.1;Ontology_term=GO:0006260,GO:0006281,GO:0003677,GO:0003911;gbkey=CDS;gene=ligA;go_function=DNA binding|0003677||IEA,DNA ligase (NAD+) activity|0003911||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009654898.1;locus_tag=PHA56_RS07615;product=NAD-dependent DNA ligase LigA;protein_id=WP_032693084.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1579688 1579906 . + . ID=gene-PHA56_RS07620;Name=PHA56_RS07620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS07620;old_locus_tag=PHA56_07620 NZ_CP116214.1 Protein Homology CDS 1579688 1579906 . + 0 ID=cds-WP_004123346.1;Parent=gene-PHA56_RS07620;Dbxref=Genbank:WP_004123346.1;Name=WP_004123346.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228123.1;locus_tag=PHA56_RS07620;product=DUF3820 family protein;protein_id=WP_004123346.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1579903 1580901 . - . ID=gene-PHA56_RS07625;Name=PHA56_RS07625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS07625;old_locus_tag=PHA56_07625 NZ_CP116214.1 Protein Homology CDS 1579903 1580901 . - 0 ID=cds-WP_271292964.1;Parent=gene-PHA56_RS07625;Dbxref=Genbank:WP_271292964.1;Name=WP_271292964.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228122.1;locus_tag=PHA56_RS07625;product=bile acid:sodium symporter;protein_id=WP_271292964.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1580991 1581917 . + . ID=gene-PHA56_RS07630;Name=PHA56_RS07630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS07630;old_locus_tag=PHA56_07630 NZ_CP116214.1 Protein Homology CDS 1580991 1581917 . + 0 ID=cds-WP_042945769.1;Parent=gene-PHA56_RS07630;Dbxref=Genbank:WP_042945769.1;Name=WP_042945769.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228121.1;locus_tag=PHA56_RS07630;product=LysR family transcriptional regulator;protein_id=WP_042945769.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1582040 1582873 . + . ID=gene-PHA56_RS07635;Name=xapA;gbkey=Gene;gene=xapA;gene_biotype=protein_coding;locus_tag=PHA56_RS07635;old_locus_tag=PHA56_07635 NZ_CP116214.1 Protein Homology CDS 1582040 1582873 . + 0 ID=cds-WP_014230309.1;Parent=gene-PHA56_RS07635;Dbxref=Genbank:WP_014230309.1;Name=WP_014230309.1;Ontology_term=GO:0006139,GO:0004731;gbkey=CDS;gene=xapA;go_function=purine-nucleoside phosphorylase activity|0004731||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017441403.1;locus_tag=PHA56_RS07635;product=xanthosine phosphorylase;protein_id=WP_014230309.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1582934 1584190 . + . ID=gene-PHA56_RS07640;Name=PHA56_RS07640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS07640;old_locus_tag=PHA56_07640 NZ_CP116214.1 Protein Homology CDS 1582934 1584190 . + 0 ID=cds-WP_038424756.1;Parent=gene-PHA56_RS07640;Dbxref=Genbank:WP_038424756.1;Name=WP_038424756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461356.1;locus_tag=PHA56_RS07640;product=nucleoside permease;protein_id=WP_038424756.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1584289 1585173 . + . ID=gene-PHA56_RS07645;Name=PHA56_RS07645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS07645;old_locus_tag=PHA56_07645 NZ_CP116214.1 Protein Homology CDS 1584289 1585173 . + 0 ID=cds-WP_014230307.1;Parent=gene-PHA56_RS07645;Dbxref=Genbank:WP_014230307.1;Name=WP_014230307.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009654893.1;locus_tag=PHA56_RS07645;product=LysR family transcriptional regulator;protein_id=WP_014230307.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1585488 1585563 . - . ID=gene-PHA56_RS07650;Name=PHA56_RS07650;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA56_RS07650;old_locus_tag=PHA56_07650 NZ_CP116214.1 tRNAscan-SE tRNA 1585488 1585563 . - . ID=rna-PHA56_RS07650;Parent=gene-PHA56_RS07650;anticodon=(pos:complement(1585528..1585530));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS07650;product=tRNA-Lys NZ_CP116214.1 tRNAscan-SE exon 1585488 1585563 . - . ID=exon-PHA56_RS07650-1;Parent=rna-PHA56_RS07650;anticodon=(pos:complement(1585528..1585530));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS07650;product=tRNA-Lys NZ_CP116214.1 RefSeq gene 1585568 1585643 . - . ID=gene-PHA56_RS07655;Name=PHA56_RS07655;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA56_RS07655;old_locus_tag=PHA56_07655 NZ_CP116214.1 tRNAscan-SE tRNA 1585568 1585643 . - . ID=rna-PHA56_RS07655;Parent=gene-PHA56_RS07655;anticodon=(pos:complement(1585608..1585610));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS07655;product=tRNA-Val NZ_CP116214.1 tRNAscan-SE exon 1585568 1585643 . - . ID=exon-PHA56_RS07655-1;Parent=rna-PHA56_RS07655;anticodon=(pos:complement(1585608..1585610));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS07655;product=tRNA-Val NZ_CP116214.1 RefSeq gene 1585690 1585765 . - . ID=gene-PHA56_RS07660;Name=PHA56_RS07660;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA56_RS07660;old_locus_tag=PHA56_07660 NZ_CP116214.1 tRNAscan-SE tRNA 1585690 1585765 . - . ID=rna-PHA56_RS07660;Parent=gene-PHA56_RS07660;anticodon=(pos:complement(1585730..1585732));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS07660;product=tRNA-Val NZ_CP116214.1 tRNAscan-SE exon 1585690 1585765 . - . ID=exon-PHA56_RS07660-1;Parent=rna-PHA56_RS07660;anticodon=(pos:complement(1585730..1585732));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS07660;product=tRNA-Val NZ_CP116214.1 RefSeq gene 1585810 1585885 . - . ID=gene-PHA56_RS07665;Name=PHA56_RS07665;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA56_RS07665;old_locus_tag=PHA56_07665 NZ_CP116214.1 tRNAscan-SE tRNA 1585810 1585885 . - . ID=rna-PHA56_RS07665;Parent=gene-PHA56_RS07665;anticodon=(pos:complement(1585850..1585852));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS07665;product=tRNA-Val NZ_CP116214.1 tRNAscan-SE exon 1585810 1585885 . - . ID=exon-PHA56_RS07665-1;Parent=rna-PHA56_RS07665;anticodon=(pos:complement(1585850..1585852));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS07665;product=tRNA-Val NZ_CP116214.1 RefSeq gene 1586145 1587563 . + . ID=gene-PHA56_RS07670;Name=gltX;gbkey=Gene;gene=gltX;gene_biotype=protein_coding;locus_tag=PHA56_RS07670;old_locus_tag=PHA56_07670 NZ_CP116214.1 Protein Homology CDS 1586145 1587563 . + 0 ID=cds-WP_014230306.1;Parent=gene-PHA56_RS07670;Dbxref=Genbank:WP_014230306.1;Name=WP_014230306.1;Ontology_term=GO:0006424,GO:0004818,GO:0009332;gbkey=CDS;gene=gltX;go_component=glutamate-tRNA ligase complex|0009332||IEA;go_function=glutamate-tRNA ligase activity|0004818||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228120.1;locus_tag=PHA56_RS07670;product=glutamate--tRNA ligase;protein_id=WP_014230306.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1587623 1588015 . - . ID=gene-PHA56_RS07675;Name=PHA56_RS07675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS07675;old_locus_tag=PHA56_07675 NZ_CP116214.1 Protein Homology CDS 1587623 1588015 . - 0 ID=cds-WP_038424753.1;Parent=gene-PHA56_RS07675;Dbxref=Genbank:WP_038424753.1;Name=WP_038424753.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002913435.1;locus_tag=PHA56_RS07675;product=putative DNA-binding transcriptional regulator;protein_id=WP_038424753.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1588020 1588373 . - . ID=gene-PHA56_RS07680;Name=PHA56_RS07680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS07680;old_locus_tag=PHA56_07680 NZ_CP116214.1 Protein Homology CDS 1588020 1588373 . - 0 ID=cds-WP_004852968.1;Parent=gene-PHA56_RS07680;Dbxref=Genbank:WP_004852968.1;Name=WP_004852968.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228118.1;locus_tag=PHA56_RS07680;product=putative DNA-binding transcriptional regulator;protein_id=WP_004852968.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1588593 1588668 . + . ID=gene-PHA56_RS07685;Name=PHA56_RS07685;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA56_RS07685;old_locus_tag=PHA56_07685 NZ_CP116214.1 tRNAscan-SE tRNA 1588593 1588668 . + . ID=rna-PHA56_RS07685;Parent=gene-PHA56_RS07685;anticodon=(pos:1588626..1588628);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS07685;product=tRNA-Ala NZ_CP116214.1 tRNAscan-SE exon 1588593 1588668 . + . ID=exon-PHA56_RS07685-1;Parent=rna-PHA56_RS07685;anticodon=(pos:1588626..1588628);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS07685;product=tRNA-Ala NZ_CP116214.1 RefSeq gene 1588710 1588785 . + . ID=gene-PHA56_RS07690;Name=PHA56_RS07690;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA56_RS07690;old_locus_tag=PHA56_07690 NZ_CP116214.1 tRNAscan-SE tRNA 1588710 1588785 . + . ID=rna-PHA56_RS07690;Parent=gene-PHA56_RS07690;anticodon=(pos:1588743..1588745);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS07690;product=tRNA-Ala NZ_CP116214.1 tRNAscan-SE exon 1588710 1588785 . + . ID=exon-PHA56_RS07690-1;Parent=rna-PHA56_RS07690;anticodon=(pos:1588743..1588745);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS07690;product=tRNA-Ala NZ_CP116214.1 RefSeq gene 1588987 1591167 . + . ID=gene-PHA56_RS07695;Name=PHA56_RS07695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS07695;old_locus_tag=PHA56_07695 NZ_CP116214.1 Protein Homology CDS 1588987 1591167 . + 0 ID=cds-WP_038424751.1;Parent=gene-PHA56_RS07695;Dbxref=Genbank:WP_038424751.1;Name=WP_038424751.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014839154.1;locus_tag=PHA56_RS07695;product=EAL domain-containing protein;protein_id=WP_038424751.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1591210 1592412 . - . ID=gene-PHA56_RS07700;Name=PHA56_RS07700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS07700;old_locus_tag=PHA56_07700 NZ_CP116214.1 Protein Homology CDS 1591210 1592412 . - 0 ID=cds-WP_004104312.1;Parent=gene-PHA56_RS07700;Dbxref=Genbank:WP_004104312.1;Name=WP_004104312.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228116.1;locus_tag=PHA56_RS07700;product=NupC/NupG family nucleoside CNT transporter;protein_id=WP_004104312.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1592759 1593994 . + . ID=gene-PHA56_RS07705;Name=PHA56_RS07705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS07705;old_locus_tag=PHA56_07705 NZ_CP116214.1 Protein Homology CDS 1592759 1593994 . + 0 ID=cds-WP_025106644.1;Parent=gene-PHA56_RS07705;Dbxref=Genbank:WP_025106644.1;Name=WP_025106644.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004123315.1;locus_tag=PHA56_RS07705;product=Nramp family divalent metal transporter;protein_id=WP_025106644.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1594037 1594387 . - . ID=gene-PHA56_RS07710;Name=PHA56_RS07710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS07710;old_locus_tag=PHA56_07710 NZ_CP116214.1 Protein Homology CDS 1594037 1594387 . - 0 ID=cds-WP_014230302.1;Parent=gene-PHA56_RS07710;Dbxref=Genbank:WP_014230302.1;Name=WP_014230302.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228114.1;locus_tag=PHA56_RS07710;product=DUF2502 domain-containing protein;protein_id=WP_014230302.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1594518 1595510 . - . ID=gene-PHA56_RS07715;Name=mgrA;gbkey=Gene;gene=mgrA;gene_biotype=protein_coding;locus_tag=PHA56_RS07715;old_locus_tag=PHA56_07715 NZ_CP116214.1 Protein Homology CDS 1594518 1595510 . - 0 ID=cds-WP_014230301.1;Parent=gene-PHA56_RS07715;Dbxref=Genbank:WP_014230301.1;Name=WP_014230301.1;Ontology_term=GO:0047834;gbkey=CDS;gene=mgrA;go_function=D-threo-aldose 1-dehydrogenase activity|0047834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228113.1;locus_tag=PHA56_RS07715;product=L-glyceraldehyde 3-phosphate reductase;protein_id=WP_014230301.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1595687 1597348 . + . ID=gene-PHA56_RS07720;Name=PHA56_RS07720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS07720;old_locus_tag=PHA56_07720 NZ_CP116214.1 Protein Homology CDS 1595687 1597348 . + 0 ID=cds-WP_014230300.1;Parent=gene-PHA56_RS07720;Dbxref=Genbank:WP_014230300.1;Name=WP_014230300.1;Ontology_term=GO:0030976;gbkey=CDS;go_function=thiamine pyrophosphate binding|0030976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228112.1;locus_tag=PHA56_RS07720;product=thiamine pyrophosphate-binding protein;protein_id=WP_014230300.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1597345 1598580 . - . ID=gene-PHA56_RS07725;Name=PHA56_RS07725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS07725;old_locus_tag=PHA56_07725 NZ_CP116214.1 Protein Homology CDS 1597345 1598580 . - 0 ID=cds-WP_038424750.1;Parent=gene-PHA56_RS07725;Dbxref=Genbank:WP_038424750.1;Name=WP_038424750.1;Ontology_term=GO:0005247;gbkey=CDS;go_function=voltage-gated chloride channel activity|0005247||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228111.1;locus_tag=PHA56_RS07725;product=ion channel protein;protein_id=WP_038424750.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1598834 1599799 . + . ID=gene-PHA56_RS07730;Name=glk;gbkey=Gene;gene=glk;gene_biotype=protein_coding;locus_tag=PHA56_RS07730;old_locus_tag=PHA56_07730 NZ_CP116214.1 Protein Homology CDS 1598834 1599799 . + 0 ID=cds-WP_014839151.1;Parent=gene-PHA56_RS07730;Dbxref=Genbank:WP_014839151.1;Name=WP_014839151.1;Ontology_term=GO:0006096,GO:0051156,GO:0004340,GO:0005524,GO:0005536;gbkey=CDS;gene=glk;go_function=glucokinase activity|0004340||IEA,ATP binding|0005524||IEA,glucose binding|0005536||IEA;go_process=glycolytic process|0006096||IEA,glucose 6-phosphate metabolic process|0051156||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228110.1;locus_tag=PHA56_RS07730;product=glucokinase;protein_id=WP_014839151.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1599844 1600587 . - . ID=gene-PHA56_RS07735;Name=PHA56_RS07735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS07735;old_locus_tag=PHA56_07735 NZ_CP116214.1 Protein Homology CDS 1599844 1600587 . - 0 ID=cds-WP_032694853.1;Parent=gene-PHA56_RS07735;Dbxref=Genbank:WP_032694853.1;Name=WP_032694853.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311288.1;locus_tag=PHA56_RS07735;product=LytTR family DNA-binding domain-containing protein;protein_id=WP_032694853.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1600599 1602278 . - . ID=gene-PHA56_RS07740;Name=PHA56_RS07740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS07740;old_locus_tag=PHA56_07740 NZ_CP116214.1 Protein Homology CDS 1600599 1602278 . - 0 ID=cds-WP_161506375.1;Parent=gene-PHA56_RS07740;Dbxref=Genbank:WP_161506375.1;Name=WP_161506375.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012540955.1;locus_tag=PHA56_RS07740;product=sensor histidine kinase;protein_id=WP_161506375.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1602677 1603915 . + . ID=gene-PHA56_RS07745;Name=alaC;gbkey=Gene;gene=alaC;gene_biotype=protein_coding;locus_tag=PHA56_RS07745;old_locus_tag=PHA56_07745 NZ_CP116214.1 Protein Homology CDS 1602677 1603915 . + 0 ID=cds-WP_009654875.1;Parent=gene-PHA56_RS07745;Dbxref=Genbank:WP_009654875.1;Name=WP_009654875.1;Ontology_term=GO:0009058,GO:0003824,GO:0030170;gbkey=CDS;gene=alaC;go_function=catalytic activity|0003824||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003028236.1;locus_tag=PHA56_RS07745;product=alanine transaminase;protein_id=WP_009654875.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1603956 1604027 . - . ID=gene-PHA56_RS07750;Name=ypdK;gbkey=Gene;gene=ypdK;gene_biotype=protein_coding;locus_tag=PHA56_RS07750;old_locus_tag=PHA56_07750 NZ_CP116214.1 Protein Homology CDS 1603956 1604027 . - 0 ID=cds-WP_077777854.1;Parent=gene-PHA56_RS07750;Dbxref=Genbank:WP_077777854.1;Name=WP_077777854.1;gbkey=CDS;gene=ypdK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_077777854.1;locus_tag=PHA56_RS07750;product=membrane protein YpdK;protein_id=WP_077777854.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1604394 1605581 . - . ID=gene-PHA56_RS07755;Name=PHA56_RS07755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS07755;old_locus_tag=PHA56_07755 NZ_CP116214.1 Protein Homology CDS 1604394 1605581 . - 0 ID=cds-WP_014839149.1;Parent=gene-PHA56_RS07755;Dbxref=Genbank:WP_014839149.1;Name=WP_014839149.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014230297.1;locus_tag=PHA56_RS07755;product=cyanate transporter;protein_id=WP_014839149.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1605748 1606680 . + . ID=gene-PHA56_RS07760;Name=cynR;gbkey=Gene;gene=cynR;gene_biotype=protein_coding;locus_tag=PHA56_RS07760;old_locus_tag=PHA56_07760 NZ_CP116214.1 Protein Homology CDS 1605748 1606680 . + 0 ID=cds-WP_014230296.1;Parent=gene-PHA56_RS07760;Dbxref=Genbank:WP_014230296.1;Name=WP_014230296.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=cynR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014230296.1;locus_tag=PHA56_RS07760;product=transcriptional regulator CynR;protein_id=WP_014230296.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1606861 1607724 . - . ID=gene-PHA56_RS07765;Name=PHA56_RS07765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS07765;old_locus_tag=PHA56_07765 NZ_CP116214.1 Protein Homology CDS 1606861 1607724 . - 0 ID=cds-WP_032720501.1;Parent=gene-PHA56_RS07765;Dbxref=Genbank:WP_032720501.1;Name=WP_032720501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009654899.1;locus_tag=PHA56_RS07765;product=hypothetical protein;protein_id=WP_032720501.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1608320 1608574 . - . ID=gene-PHA56_RS07770;Name=PHA56_RS07770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS07770;old_locus_tag=PHA56_07770 NZ_CP116214.1 Protein Homology CDS 1608320 1608574 . - 0 ID=cds-WP_004852922.1;Parent=gene-PHA56_RS07770;Dbxref=Genbank:WP_004852922.1;Name=WP_004852922.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004852922.1;locus_tag=PHA56_RS07770;product=hypothetical protein;protein_id=WP_004852922.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1609245 1609580 . + . ID=gene-PHA56_RS07775;Name=PHA56_RS07775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS07775;old_locus_tag=PHA56_07775 NZ_CP116214.1 Protein Homology CDS 1609245 1609580 . + 0 ID=cds-WP_038424748.1;Parent=gene-PHA56_RS07775;Dbxref=Genbank:WP_038424748.1;Name=WP_038424748.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014839144.1;locus_tag=PHA56_RS07775;product=lysozyme inhibitor LprI family protein;protein_id=WP_038424748.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1609662 1609733 . - . ID=gene-PHA56_RS07780;Name=PHA56_RS07780;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA56_RS07780;old_locus_tag=PHA56_07780 NZ_CP116214.1 tRNAscan-SE tRNA 1609662 1609733 . - . ID=rna-PHA56_RS07780;Parent=gene-PHA56_RS07780;anticodon=(pos:complement(1609698..1609700));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS07780;product=tRNA-Arg NZ_CP116214.1 tRNAscan-SE exon 1609662 1609733 . - . ID=exon-PHA56_RS07780-1;Parent=rna-PHA56_RS07780;anticodon=(pos:complement(1609698..1609700));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS07780;product=tRNA-Arg NZ_CP116214.1 RefSeq gene 1609808 1610704 . - . ID=gene-PHA56_RS07785;Name=PHA56_RS07785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS07785;old_locus_tag=PHA56_07785 NZ_CP116214.1 Protein Homology CDS 1609808 1610704 . - 0 ID=cds-WP_038424747.1;Parent=gene-PHA56_RS07785;Dbxref=Genbank:WP_038424747.1;Name=WP_038424747.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016808409.1;locus_tag=PHA56_RS07785;product=formate/nitrite transporter family protein;protein_id=WP_038424747.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1610962 1611723 . + . ID=gene-PHA56_RS07790;Name=mlaA;gbkey=Gene;gene=mlaA;gene_biotype=protein_coding;locus_tag=PHA56_RS07790;old_locus_tag=PHA56_07790 NZ_CP116214.1 Protein Homology CDS 1610962 1611723 . + 0 ID=cds-WP_014230289.1;Parent=gene-PHA56_RS07790;Dbxref=Genbank:WP_014230289.1;Name=WP_014230289.1;Ontology_term=GO:0016020;gbkey=CDS;gene=mlaA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228097.1;locus_tag=PHA56_RS07790;product=phospholipid-binding lipoprotein MlaA;protein_id=WP_014230289.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1611786 1613150 . - . ID=gene-PHA56_RS07795;Name=fadL;gbkey=Gene;gene=fadL;gene_biotype=protein_coding;locus_tag=PHA56_RS07795;old_locus_tag=PHA56_07795 NZ_CP116214.1 Protein Homology CDS 1611786 1613150 . - 0 ID=cds-WP_014839142.1;Parent=gene-PHA56_RS07795;Dbxref=Genbank:WP_014839142.1;Name=WP_014839142.1;gbkey=CDS;gene=fadL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001766332.1;locus_tag=PHA56_RS07795;product=long-chain fatty acid transporter FadL;protein_id=WP_014839142.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1613522 1613806 . + . ID=gene-PHA56_RS07800;Name=PHA56_RS07800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS07800;old_locus_tag=PHA56_07800 NZ_CP116214.1 Protein Homology CDS 1613522 1613806 . + 0 ID=cds-WP_014230287.1;Parent=gene-PHA56_RS07800;Dbxref=Genbank:WP_014230287.1;Name=WP_014230287.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129756.1;locus_tag=PHA56_RS07800;product=DUF406 family protein;protein_id=WP_014230287.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1613966 1615276 . + . ID=gene-PHA56_RS07805;Name=fadI;gbkey=Gene;gene=fadI;gene_biotype=protein_coding;locus_tag=PHA56_RS07805;old_locus_tag=PHA56_07805 NZ_CP116214.1 Protein Homology CDS 1613966 1615276 . + 0 ID=cds-WP_025106653.1;Parent=gene-PHA56_RS07805;Dbxref=Genbank:WP_025106653.1;Name=WP_025106653.1;Ontology_term=GO:0009062,GO:0003988;gbkey=CDS;gene=fadI;go_function=acetyl-CoA C-acyltransferase activity|0003988||IEA;go_process=fatty acid catabolic process|0009062||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228093.1;locus_tag=PHA56_RS07805;product=acetyl-CoA C-acyltransferase FadI;protein_id=WP_025106653.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1615276 1617420 . + . ID=gene-PHA56_RS07810;Name=fadJ;gbkey=Gene;gene=fadJ;gene_biotype=protein_coding;locus_tag=PHA56_RS07810;old_locus_tag=PHA56_07810 NZ_CP116214.1 Protein Homology CDS 1615276 1617420 . + 0 ID=cds-WP_038424746.1;Parent=gene-PHA56_RS07810;Dbxref=Genbank:WP_038424746.1;Name=WP_038424746.1;Ontology_term=GO:0009062,GO:0003857,GO:0004300,GO:0008692;gbkey=CDS;gene=fadJ;go_function=3-hydroxyacyl-CoA dehydrogenase activity|0003857||IEA,enoyl-CoA hydratase activity|0004300||IEA,3-hydroxybutyryl-CoA epimerase activity|0008692||IEA;go_process=fatty acid catabolic process|0009062||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228092.1;locus_tag=PHA56_RS07810;product=fatty acid oxidation complex subunit alpha FadJ;protein_id=WP_038424746.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1617630 1618115 . + . ID=gene-PHA56_RS07815;Name=sixA;gbkey=Gene;gene=sixA;gene_biotype=protein_coding;locus_tag=PHA56_RS07815;old_locus_tag=PHA56_07815 NZ_CP116214.1 Protein Homology CDS 1617630 1618115 . + 0 ID=cds-WP_038424744.1;Parent=gene-PHA56_RS07815;Dbxref=Genbank:WP_038424744.1;Name=WP_038424744.1;Ontology_term=GO:0000160,GO:0101006;gbkey=CDS;gene=sixA;go_function=protein histidine phosphatase activity|0101006||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461329.1;locus_tag=PHA56_RS07815;product=phosphohistidine phosphatase SixA;protein_id=WP_038424744.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1618135 1618686 . - . ID=gene-PHA56_RS07820;Name=smrB;gbkey=Gene;gene=smrB;gene_biotype=protein_coding;locus_tag=PHA56_RS07820;old_locus_tag=PHA56_07820 NZ_CP116214.1 Protein Homology CDS 1618135 1618686 . - 0 ID=cds-WP_004123257.1;Parent=gene-PHA56_RS07820;Dbxref=Genbank:WP_004123257.1;Name=WP_004123257.1;gbkey=CDS;gene=smrB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017899504.1;locus_tag=PHA56_RS07820;product=endonuclease SmrB;protein_id=WP_004123257.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1618854 1619786 . + . ID=gene-PHA56_RS07825;Name=prmB;gbkey=Gene;gene=prmB;gene_biotype=protein_coding;locus_tag=PHA56_RS07825;old_locus_tag=PHA56_07825 NZ_CP116214.1 Protein Homology CDS 1618854 1619786 . + 0 ID=cds-WP_009652591.1;Parent=gene-PHA56_RS07825;Dbxref=Genbank:WP_009652591.1;Name=WP_009652591.1;Ontology_term=GO:0018364,GO:0042273,GO:0008276,GO:0008757;gbkey=CDS;gene=prmB;go_function=protein methyltransferase activity|0008276||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=peptidyl-glutamine methylation|0018364||IEA,ribosomal large subunit biogenesis|0042273||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129736.1;locus_tag=PHA56_RS07825;product=50S ribosomal protein L3 N(5)-glutamine methyltransferase;protein_id=WP_009652591.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1619824 1620912 . + . ID=gene-PHA56_RS07830;Name=aroC;gbkey=Gene;gene=aroC;gene_biotype=protein_coding;locus_tag=PHA56_RS07830;old_locus_tag=PHA56_07830 NZ_CP116214.1 Protein Homology CDS 1619824 1620912 . + 0 ID=cds-WP_014230282.1;Parent=gene-PHA56_RS07830;Dbxref=Genbank:WP_014230282.1;Name=WP_014230282.1;Ontology_term=GO:0009073,GO:0004107;gbkey=CDS;gene=aroC;go_function=chorismate synthase activity|0004107||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014230282.1;locus_tag=PHA56_RS07830;product=chorismate synthase;protein_id=WP_014230282.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1620913 1621737 . + . ID=gene-PHA56_RS07835;Name=mepA;gbkey=Gene;gene=mepA;gene_biotype=protein_coding;locus_tag=PHA56_RS07835;old_locus_tag=PHA56_07835 NZ_CP116214.1 Protein Homology CDS 1620913 1621737 . + 0 ID=cds-WP_014230281.1;Parent=gene-PHA56_RS07835;Dbxref=Genbank:WP_014230281.1;Name=WP_014230281.1;Ontology_term=GO:0006508,GO:0004252,GO:0030288;gbkey=CDS;gene=mepA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228087.1;locus_tag=PHA56_RS07835;product=penicillin-insensitive murein endopeptidase;protein_id=WP_014230281.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1621737 1622546 . + . ID=gene-PHA56_RS07840;Name=PHA56_RS07840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS07840;old_locus_tag=PHA56_07840 NZ_CP116214.1 Protein Homology CDS 1621737 1622546 . + 0 ID=cds-WP_014230280.1;Parent=gene-PHA56_RS07840;Dbxref=Genbank:WP_014230280.1;Name=WP_014230280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228086.1;locus_tag=PHA56_RS07840;product=sulfite exporter TauE/SafE family protein;protein_id=WP_014230280.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1622546 1623094 . + . ID=gene-PHA56_RS07845;Name=PHA56_RS07845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS07845;old_locus_tag=PHA56_07845 NZ_CP116214.1 Protein Homology CDS 1622546 1623094 . + 0 ID=cds-WP_014230279.1;Parent=gene-PHA56_RS07845;Dbxref=Genbank:WP_014230279.1;Name=WP_014230279.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461323.1;locus_tag=PHA56_RS07845;product=elongation factor P hydroxylase;protein_id=WP_014230279.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1623126 1623404 . + . ID=gene-PHA56_RS07850;Name=PHA56_RS07850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS07850;old_locus_tag=PHA56_07850 NZ_CP116214.1 Protein Homology CDS 1623126 1623404 . + 0 ID=cds-WP_014230278.1;Parent=gene-PHA56_RS07850;Dbxref=Genbank:WP_014230278.1;Name=WP_014230278.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004123241.1;locus_tag=PHA56_RS07850;product=YfcL family protein;protein_id=WP_014230278.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1623459 1625447 . - . ID=gene-PHA56_RS07855;Name=mnmC;gbkey=Gene;gene=mnmC;gene_biotype=protein_coding;locus_tag=PHA56_RS07855;old_locus_tag=PHA56_07855 NZ_CP116214.1 Protein Homology CDS 1623459 1625447 . - 0 ID=cds-WP_271292965.1;Parent=gene-PHA56_RS07855;Dbxref=Genbank:WP_271292965.1;Name=WP_271292965.1;Ontology_term=GO:0008033,GO:0004808,GO:0016491;gbkey=CDS;gene=mnmC;go_function=tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity|0004808||IEA,oxidoreductase activity|0016491||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228083.1;locus_tag=PHA56_RS07855;product=bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC;protein_id=WP_271292965.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1625606 1626823 . + . ID=gene-PHA56_RS07860;Name=fabB;gbkey=Gene;gene=fabB;gene_biotype=protein_coding;locus_tag=PHA56_RS07860;old_locus_tag=PHA56_07860 NZ_CP116214.1 Protein Homology CDS 1625606 1626823 . + 0 ID=cds-WP_014230276.1;Parent=gene-PHA56_RS07860;Dbxref=Genbank:WP_014230276.1;Name=WP_014230276.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabB;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228082.1;locus_tag=PHA56_RS07860;product=beta-ketoacyl-ACP synthase I;protein_id=WP_014230276.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1627028 1628203 . + . ID=gene-PHA56_RS07865;Name=PHA56_RS07865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS07865;old_locus_tag=PHA56_07865 NZ_CP116214.1 Protein Homology CDS 1627028 1628203 . + 0 ID=cds-WP_014230275.1;Parent=gene-PHA56_RS07865;Dbxref=Genbank:WP_014230275.1;Name=WP_014230275.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228081.1;locus_tag=PHA56_RS07865;product=MFS transporter;protein_id=WP_014230275.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1628243 1629202 . - . ID=gene-PHA56_RS07870;Name=flk;gbkey=Gene;gene=flk;gene_biotype=protein_coding;locus_tag=PHA56_RS07870;old_locus_tag=PHA56_07870 NZ_CP116214.1 Protein Homology CDS 1628243 1629202 . - 0 ID=cds-WP_032694841.1;Parent=gene-PHA56_RS07870;Dbxref=Genbank:WP_032694841.1;Name=WP_032694841.1;Ontology_term=GO:0010468,GO:0016020;gbkey=CDS;gene=flk;go_component=membrane|0016020||IEA;go_process=regulation of gene expression|0010468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004852897.1;locus_tag=PHA56_RS07870;product=flagella biosynthesis regulator Flk;protein_id=WP_032694841.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1629326 1630462 . + . ID=gene-PHA56_RS07875;Name=pdxB;gbkey=Gene;gene=pdxB;gene_biotype=protein_coding;locus_tag=PHA56_RS07875;old_locus_tag=PHA56_07875 NZ_CP116214.1 Protein Homology CDS 1629326 1630462 . + 0 ID=cds-WP_009654654.1;Parent=gene-PHA56_RS07875;Dbxref=Genbank:WP_009654654.1;Name=WP_009654654.1;Ontology_term=GO:0008615,GO:0033711,GO:0046983,GO:0051287;gbkey=CDS;gene=pdxB;go_function=4-phosphoerythronate dehydrogenase activity|0033711||IEA,protein dimerization activity|0046983||IEA,NAD binding|0051287||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228079.1;locus_tag=PHA56_RS07875;product=4-phosphoerythronate dehydrogenase PdxB;protein_id=WP_009654654.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1630525 1631538 . + . ID=gene-PHA56_RS07880;Name=PHA56_RS07880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS07880;old_locus_tag=PHA56_07880 NZ_CP116214.1 Protein Homology CDS 1630525 1631538 . + 0 ID=cds-WP_004852895.1;Parent=gene-PHA56_RS07880;Dbxref=Genbank:WP_004852895.1;Name=WP_004852895.1;Ontology_term=GO:0008652,GO:0016620,GO:0046983,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,protein dimerization activity|0046983||IEA,NAD binding|0051287||IEA;go_process=amino acid biosynthetic process|0008652||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228078.1;locus_tag=PHA56_RS07880;product=aspartate-semialdehyde dehydrogenase;protein_id=WP_004852895.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1631538 1632350 . + . ID=gene-PHA56_RS07885;Name=truA;gbkey=Gene;gene=truA;gene_biotype=protein_coding;locus_tag=PHA56_RS07885;old_locus_tag=PHA56_07885 NZ_CP116214.1 Protein Homology CDS 1631538 1632350 . + 0 ID=cds-WP_009654666.1;Parent=gene-PHA56_RS07885;Dbxref=Genbank:WP_009654666.1;Name=WP_009654666.1;Ontology_term=GO:0006400,GO:0009982;gbkey=CDS;gene=truA;go_function=pseudouridine synthase activity|0009982||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228077.1;locus_tag=PHA56_RS07885;product=tRNA pseudouridine(38-40) synthase TruA;protein_id=WP_009654666.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1632378 1633037 . + . ID=gene-PHA56_RS07890;Name=PHA56_RS07890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS07890;old_locus_tag=PHA56_07890 NZ_CP116214.1 Protein Homology CDS 1632378 1633037 . + 0 ID=cds-WP_004123217.1;Parent=gene-PHA56_RS07890;Dbxref=Genbank:WP_004123217.1;Name=WP_004123217.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228076.1;locus_tag=PHA56_RS07890;product=DedA family protein;protein_id=WP_004123217.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1633232 1634146 . + . ID=gene-PHA56_RS07895;Name=accD;gbkey=Gene;gene=accD;gene_biotype=protein_coding;locus_tag=PHA56_RS07895;old_locus_tag=PHA56_07895 NZ_CP116214.1 Protein Homology CDS 1633232 1634146 . + 0 ID=cds-WP_004870882.1;Parent=gene-PHA56_RS07895;Dbxref=Genbank:WP_004870882.1;Name=WP_004870882.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accD;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311227.1;locus_tag=PHA56_RS07895;product=acetyl-CoA carboxylase%2C carboxyltransferase subunit beta;protein_id=WP_004870882.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1634219 1635487 . + . ID=gene-PHA56_RS07900;Name=folC;gbkey=Gene;gene=folC;gene_biotype=protein_coding;locus_tag=PHA56_RS07900;old_locus_tag=PHA56_07900 NZ_CP116214.1 Protein Homology CDS 1634219 1635487 . + 0 ID=cds-WP_032694839.1;Parent=gene-PHA56_RS07900;Dbxref=Genbank:WP_032694839.1;Name=WP_032694839.1;Ontology_term=GO:0009396,GO:0004326,GO:0005524,GO:0016874;gbkey=CDS;gene=folC;go_function=tetrahydrofolylpolyglutamate synthase activity|0004326||IEA,ATP binding|0005524||IEA,ligase activity|0016874||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228074.1;locus_tag=PHA56_RS07900;product=bifunctional tetrahydrofolate synthase/dihydrofolate synthase;protein_id=WP_032694839.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1635477 1636163 . + . ID=gene-PHA56_RS07905;Name=dedD;gbkey=Gene;gene=dedD;gene_biotype=protein_coding;locus_tag=PHA56_RS07905;old_locus_tag=PHA56_07905 NZ_CP116214.1 Protein Homology CDS 1635477 1636163 . + 0 ID=cds-WP_014839134.1;Parent=gene-PHA56_RS07905;Dbxref=Genbank:WP_014839134.1;Name=WP_014839134.1;Ontology_term=GO:0032506,GO:0042834,GO:0030428;gbkey=CDS;gene=dedD;go_component=cell septum|0030428||IEA;go_function=peptidoglycan binding|0042834||IEA;go_process=cytokinetic process|0032506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004123213.1;locus_tag=PHA56_RS07905;product=cell division protein DedD;protein_id=WP_014839134.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1636363 1636851 . + . ID=gene-PHA56_RS07910;Name=cvpA;gbkey=Gene;gene=cvpA;gene_biotype=protein_coding;locus_tag=PHA56_RS07910;old_locus_tag=PHA56_07910 NZ_CP116214.1 Protein Homology CDS 1636363 1636851 . + 0 ID=cds-WP_004104143.1;Parent=gene-PHA56_RS07910;Dbxref=Genbank:WP_004104143.1;Name=WP_004104143.1;gbkey=CDS;gene=cvpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311224.1;locus_tag=PHA56_RS07910;product=colicin V production protein;protein_id=WP_004104143.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1636885 1638402 . + . ID=gene-PHA56_RS07915;Name=purF;gbkey=Gene;gene=purF;gene_biotype=protein_coding;locus_tag=PHA56_RS07915;old_locus_tag=PHA56_07915 NZ_CP116214.1 Protein Homology CDS 1636885 1638402 . + 0 ID=cds-WP_004123211.1;Parent=gene-PHA56_RS07915;Dbxref=Genbank:WP_004123211.1;Name=WP_004123211.1;Ontology_term=GO:0009152,GO:0004044;gbkey=CDS;gene=purF;go_function=amidophosphoribosyltransferase activity|0004044||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006820991.1;locus_tag=PHA56_RS07915;product=amidophosphoribosyltransferase;protein_id=WP_004123211.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1638539 1639108 . + . ID=gene-PHA56_RS07920;Name=PHA56_RS07920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS07920;old_locus_tag=PHA56_07920 NZ_CP116214.1 Protein Homology CDS 1638539 1639108 . + 0 ID=cds-WP_004852887.1;Parent=gene-PHA56_RS07920;Dbxref=Genbank:WP_004852887.1;Name=WP_004852887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228070.1;locus_tag=PHA56_RS07920;product=UbiX family flavin prenyltransferase;protein_id=WP_004852887.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1639400 1640182 . + . ID=gene-PHA56_RS07925;Name=argT;gbkey=Gene;gene=argT;gene_biotype=protein_coding;locus_tag=PHA56_RS07925;old_locus_tag=PHA56_07925 NZ_CP116214.1 Protein Homology CDS 1639400 1640182 . + 0 ID=cds-WP_014230270.1;Parent=gene-PHA56_RS07925;Dbxref=Genbank:WP_014230270.1;Name=WP_014230270.1;gbkey=CDS;gene=argT;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228068.1;locus_tag=PHA56_RS07925;product=lysine/arginine/ornithine ABC transporter substrate-binding protein ArgT;protein_id=WP_014230270.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1640440 1641222 . + . ID=gene-PHA56_RS07930;Name=hisJ;gbkey=Gene;gene=hisJ;gene_biotype=protein_coding;locus_tag=PHA56_RS07930;old_locus_tag=PHA56_07930 NZ_CP116214.1 Protein Homology CDS 1640440 1641222 . + 0 ID=cds-WP_004123203.1;Parent=gene-PHA56_RS07930;Dbxref=Genbank:WP_004123203.1;Name=WP_004123203.1;gbkey=CDS;gene=hisJ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228067.1;locus_tag=PHA56_RS07930;product=histidine ABC transporter substrate-binding protein HisJ;protein_id=WP_004123203.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1641289 1641975 . + . ID=gene-PHA56_RS07935;Name=PHA56_RS07935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS07935;old_locus_tag=PHA56_07935 NZ_CP116214.1 Protein Homology CDS 1641289 1641975 . + 0 ID=cds-WP_014230269.1;Parent=gene-PHA56_RS07935;Dbxref=Genbank:WP_014230269.1;Name=WP_014230269.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012124147.1;locus_tag=PHA56_RS07935;product=histidine ABC transporter permease HisQ;protein_id=WP_014230269.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1641972 1642688 . + . ID=gene-PHA56_RS07940;Name=hisM;gbkey=Gene;gene=hisM;gene_biotype=protein_coding;locus_tag=PHA56_RS07940;old_locus_tag=PHA56_07940 NZ_CP116214.1 Protein Homology CDS 1641972 1642688 . + 0 ID=cds-WP_004852883.1;Parent=gene-PHA56_RS07940;Dbxref=Genbank:WP_004852883.1;Name=WP_004852883.1;gbkey=CDS;gene=hisM;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228065.1;locus_tag=PHA56_RS07940;product=histidine ABC transporter permease HisM;protein_id=WP_004852883.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1642696 1643469 . + . ID=gene-PHA56_RS07945;Name=hisP;gbkey=Gene;gene=hisP;gene_biotype=protein_coding;locus_tag=PHA56_RS07945;old_locus_tag=PHA56_07945 NZ_CP116214.1 Protein Homology CDS 1642696 1643469 . + 0 ID=cds-WP_004852881.1;Parent=gene-PHA56_RS07945;Dbxref=Genbank:WP_004852881.1;Name=WP_004852881.1;gbkey=CDS;gene=hisP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228064.1;locus_tag=PHA56_RS07945;product=histidine ABC transporter ATP-binding protein HisP;protein_id=WP_004852881.1;transl_table=11 NZ_CP116214.1 RefSeq pseudogene 1643504 1644008 . - . ID=gene-PHA56_RS07950;Name=PHA56_RS07950;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS07950;old_locus_tag=PHA56_07950;partial=true;pseudo=true;start_range=.,1643504 NZ_CP116214.1 Protein Homology CDS 1643504 1644008 . - 0 ID=cds-PHA56_RS07950;Parent=gene-PHA56_RS07950;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228063.1;locus_tag=PHA56_RS07950;partial=true;product=GNAT family N-acetyltransferase;pseudo=true;start_range=.,1643504;transl_table=11 NZ_CP116214.1 RefSeq gene 1644076 1644642 . - . ID=gene-PHA56_RS07955;Name=PHA56_RS07955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS07955;old_locus_tag=PHA56_07955 NZ_CP116214.1 Protein Homology CDS 1644076 1644642 . - 0 ID=cds-WP_032694836.1;Parent=gene-PHA56_RS07955;Dbxref=Genbank:WP_032694836.1;Name=WP_032694836.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004104113.1;locus_tag=PHA56_RS07955;product=hypothetical protein;protein_id=WP_032694836.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1644646 1644900 . - . ID=gene-PHA56_RS07960;Name=PHA56_RS07960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS07960;old_locus_tag=PHA56_07960 NZ_CP116214.1 Protein Homology CDS 1644646 1644900 . - 0 ID=cds-WP_032720494.1;Parent=gene-PHA56_RS07960;Dbxref=Genbank:WP_032720494.1;Name=WP_032720494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004123187.1;locus_tag=PHA56_RS07960;product=hypothetical protein;protein_id=WP_032720494.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1645115 1646008 . - . ID=gene-PHA56_RS07965;Name=PHA56_RS07965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS07965;old_locus_tag=PHA56_07965 NZ_CP116214.1 Protein Homology CDS 1645115 1646008 . - 0 ID=cds-WP_014230265.1;Parent=gene-PHA56_RS07965;Dbxref=Genbank:WP_014230265.1;Name=WP_014230265.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416807.1;locus_tag=PHA56_RS07965;product=TIGR01777 family oxidoreductase;protein_id=WP_014230265.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1646029 1646391 . - . ID=gene-PHA56_RS07970;Name=folX;gbkey=Gene;gene=folX;gene_biotype=protein_coding;locus_tag=PHA56_RS07970;old_locus_tag=PHA56_07970 NZ_CP116214.1 Protein Homology CDS 1646029 1646391 . - 0 ID=cds-WP_004104107.1;Parent=gene-PHA56_RS07970;Dbxref=Genbank:WP_004104107.1;Name=WP_004104107.1;Ontology_term=GO:0006760,GO:0004150;gbkey=CDS;gene=folX;go_function=dihydroneopterin aldolase activity|0004150||IEA;go_process=folic acid-containing compound metabolic process|0006760||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228060.1;locus_tag=PHA56_RS07970;product=dihydroneopterin triphosphate 2'-epimerase;protein_id=WP_004104107.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1646457 1647086 . - . ID=gene-PHA56_RS07975;Name=yfcG;gbkey=Gene;gene=yfcG;gene_biotype=protein_coding;locus_tag=PHA56_RS07975;old_locus_tag=PHA56_07975 NZ_CP116214.1 Protein Homology CDS 1646457 1647086 . - 0 ID=cds-WP_014230264.1;Parent=gene-PHA56_RS07975;Dbxref=Genbank:WP_014230264.1;Name=WP_014230264.1;gbkey=CDS;gene=yfcG;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228059.1;locus_tag=PHA56_RS07975;product=GSH-dependent disulfide bond oxidoreductase;protein_id=WP_014230264.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1647296 1647940 . + . ID=gene-PHA56_RS07980;Name=yfcF;gbkey=Gene;gene=yfcF;gene_biotype=protein_coding;locus_tag=PHA56_RS07980;old_locus_tag=PHA56_07980 NZ_CP116214.1 Protein Homology CDS 1647296 1647940 . + 0 ID=cds-WP_038424740.1;Parent=gene-PHA56_RS07980;Dbxref=Genbank:WP_038424740.1;Name=WP_038424740.1;Ontology_term=GO:0006749;gbkey=CDS;gene=yfcF;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015583785.1;locus_tag=PHA56_RS07980;product=glutathione transferase;protein_id=WP_038424740.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1647997 1648548 . + . ID=gene-PHA56_RS07985;Name=yfcE;gbkey=Gene;gene=yfcE;gene_biotype=protein_coding;locus_tag=PHA56_RS07985;old_locus_tag=PHA56_07985 NZ_CP116214.1 Protein Homology CDS 1647997 1648548 . + 0 ID=cds-WP_014230262.1;Parent=gene-PHA56_RS07985;Dbxref=Genbank:WP_014230262.1;Name=WP_014230262.1;gbkey=CDS;gene=yfcE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228057.1;locus_tag=PHA56_RS07985;product=phosphodiesterase;protein_id=WP_014230262.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1648607 1649161 . + . ID=gene-PHA56_RS07990;Name=yfcD;gbkey=Gene;gene=yfcD;gene_biotype=protein_coding;locus_tag=PHA56_RS07990;old_locus_tag=PHA56_07990 NZ_CP116214.1 Protein Homology CDS 1648607 1649161 . + 0 ID=cds-WP_004852867.1;Parent=gene-PHA56_RS07990;Dbxref=Genbank:WP_004852867.1;Name=WP_004852867.1;Ontology_term=GO:0016817;gbkey=CDS;gene=yfcD;go_function=hydrolase activity%2C acting on acid anhydrides|0016817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003839343.1;locus_tag=PHA56_RS07990;product=NUDIX hydrolase YfcD;protein_id=WP_004852867.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1649166 1650185 . - . ID=gene-PHA56_RS07995;Name=PHA56_RS07995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS07995;old_locus_tag=PHA56_07995 NZ_CP116214.1 Protein Homology CDS 1649166 1650185 . - 0 ID=cds-WP_014230261.1;Parent=gene-PHA56_RS07995;Dbxref=Genbank:WP_014230261.1;Name=WP_014230261.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461287.1;locus_tag=PHA56_RS07995;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_014230261.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1650421 1650864 . + . ID=gene-PHA56_RS08000;Name=PHA56_RS08000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS08000;old_locus_tag=PHA56_08000 NZ_CP116214.1 Protein Homology CDS 1650421 1650864 . + 0 ID=cds-WP_014230260.1;Parent=gene-PHA56_RS08000;Dbxref=Genbank:WP_014230260.1;Name=WP_014230260.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461286.1;locus_tag=PHA56_RS08000;product=PTS sugar transporter subunit IIA;protein_id=WP_014230260.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1650944 1651216 . + . ID=gene-PHA56_RS08005;Name=PHA56_RS08005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS08005;old_locus_tag=PHA56_08005 NZ_CP116214.1 Protein Homology CDS 1650944 1651216 . + 0 ID=cds-WP_004870916.1;Parent=gene-PHA56_RS08005;Dbxref=Genbank:WP_004870916.1;Name=WP_004870916.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461285.1;locus_tag=PHA56_RS08005;product=PTS sugar transporter subunit IIB;protein_id=WP_004870916.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1651237 1652628 . + . ID=gene-PHA56_RS08010;Name=PHA56_RS08010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS08010;old_locus_tag=PHA56_08010 NZ_CP116214.1 Protein Homology CDS 1651237 1652628 . + 0 ID=cds-WP_004852862.1;Parent=gene-PHA56_RS08010;Dbxref=Genbank:WP_004852862.1;Name=WP_004852862.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006811393.1;locus_tag=PHA56_RS08010;product=PTS ascorbate transporter subunit IIC;protein_id=WP_004852862.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1652625 1653455 . + . ID=gene-PHA56_RS08015;Name=PHA56_RS08015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS08015;old_locus_tag=PHA56_08015 NZ_CP116214.1 Protein Homology CDS 1652625 1653455 . + 0 ID=cds-WP_014230259.1;Parent=gene-PHA56_RS08015;Dbxref=Genbank:WP_014230259.1;Name=WP_014230259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461283.1;locus_tag=PHA56_RS08015;product=transketolase;protein_id=WP_014230259.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1653448 1654401 . + . ID=gene-PHA56_RS08020;Name=PHA56_RS08020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS08020;old_locus_tag=PHA56_08020 NZ_CP116214.1 Protein Homology CDS 1653448 1654401 . + 0 ID=cds-WP_032720492.1;Parent=gene-PHA56_RS08020;Dbxref=Genbank:WP_032720492.1;Name=WP_032720492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461282.1;locus_tag=PHA56_RS08020;product=transketolase family protein;protein_id=WP_032720492.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1654448 1656592 . - . ID=gene-PHA56_RS08025;Name=pta;gbkey=Gene;gene=pta;gene_biotype=protein_coding;locus_tag=PHA56_RS08025;old_locus_tag=PHA56_08025 NZ_CP116214.1 Protein Homology CDS 1654448 1656592 . - 0 ID=cds-WP_014230257.1;Parent=gene-PHA56_RS08025;Dbxref=Genbank:WP_014230257.1;Name=WP_014230257.1;Ontology_term=GO:0016407;gbkey=CDS;gene=pta;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014230257.1;locus_tag=PHA56_RS08025;product=phosphate acetyltransferase;protein_id=WP_014230257.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1656794 1657996 . - . ID=gene-PHA56_RS08030;Name=ackA;gbkey=Gene;gene=ackA;gene_biotype=protein_coding;locus_tag=PHA56_RS08030;old_locus_tag=PHA56_08030 NZ_CP116214.1 Protein Homology CDS 1656794 1657996 . - 0 ID=cds-WP_032694827.1;Parent=gene-PHA56_RS08030;Dbxref=Genbank:WP_032694827.1;Name=WP_032694827.1;gbkey=CDS;gene=ackA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129491.1;locus_tag=PHA56_RS08030;product=acetate kinase;protein_id=WP_032694827.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1658333 1658788 . + . ID=gene-PHA56_RS08035;Name=PHA56_RS08035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS08035;old_locus_tag=PHA56_08035 NZ_CP116214.1 Protein Homology CDS 1658333 1658788 . + 0 ID=cds-WP_004104090.1;Parent=gene-PHA56_RS08035;Dbxref=Genbank:WP_004104090.1;Name=WP_004104090.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228053.1;locus_tag=PHA56_RS08035;product=terminus macrodomain insulation protein YfbV;protein_id=WP_004104090.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1658875 1659369 . + . ID=gene-PHA56_RS08040;Name=PHA56_RS08040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS08040;old_locus_tag=PHA56_08040 NZ_CP116214.1 Protein Homology CDS 1658875 1659369 . + 0 ID=cds-WP_004123152.1;Parent=gene-PHA56_RS08040;Dbxref=Genbank:WP_004123152.1;Name=WP_004123152.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007371080.1;locus_tag=PHA56_RS08040;product=YfbU family protein;protein_id=WP_004123152.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1659381 1660040 . + . ID=gene-PHA56_RS08045;Name=PHA56_RS08045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS08045;old_locus_tag=PHA56_08045 NZ_CP116214.1 Protein Homology CDS 1659381 1660040 . + 0 ID=cds-WP_009654668.1;Parent=gene-PHA56_RS08045;Dbxref=Genbank:WP_009654668.1;Name=WP_009654668.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009654668.1;locus_tag=PHA56_RS08045;product=sugar phosphatase;protein_id=WP_009654668.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1660117 1661949 . + . ID=gene-PHA56_RS08050;Name=PHA56_RS08050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS08050;old_locus_tag=PHA56_08050 NZ_CP116214.1 Protein Homology CDS 1660117 1661949 . + 0 ID=cds-WP_014230256.1;Parent=gene-PHA56_RS08050;Dbxref=Genbank:WP_014230256.1;Name=WP_014230256.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228050.1;locus_tag=PHA56_RS08050;product=SLC13 family permease;protein_id=WP_014230256.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1662002 1662601 . - . ID=gene-PHA56_RS08055;Name=yfbR;gbkey=Gene;gene=yfbR;gene_biotype=protein_coding;locus_tag=PHA56_RS08055;old_locus_tag=PHA56_08055 NZ_CP116214.1 Protein Homology CDS 1662002 1662601 . - 0 ID=cds-WP_004852850.1;Parent=gene-PHA56_RS08055;Dbxref=Genbank:WP_004852850.1;Name=WP_004852850.1;Ontology_term=GO:0002953;gbkey=CDS;gene=yfbR;go_function=5'-deoxynucleotidase activity|0002953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007699992.1;locus_tag=PHA56_RS08055;product=5'-deoxynucleotidase;protein_id=WP_004852850.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1662689 1663906 . - . ID=gene-PHA56_RS08060;Name=alaA;gbkey=Gene;gene=alaA;gene_biotype=protein_coding;locus_tag=PHA56_RS08060;old_locus_tag=PHA56_08060 NZ_CP116214.1 Protein Homology CDS 1662689 1663906 . - 0 ID=cds-WP_038424739.1;Parent=gene-PHA56_RS08060;Dbxref=Genbank:WP_038424739.1;Name=WP_038424739.1;gbkey=CDS;gene=alaA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228048.1;locus_tag=PHA56_RS08060;product=alanine transaminase AlaA;protein_id=WP_038424739.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1664794 1665720 . + . ID=gene-PHA56_RS08065;Name=PHA56_RS08065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS08065;old_locus_tag=PHA56_08065 NZ_CP116214.1 Protein Homology CDS 1664794 1665720 . + 0 ID=cds-WP_014839121.1;Parent=gene-PHA56_RS08065;Dbxref=Genbank:WP_014839121.1;Name=WP_014839121.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014839121.1;locus_tag=PHA56_RS08065;product=LysR family transcriptional regulator;protein_id=WP_014839121.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1666372 1666818 . + . ID=gene-PHA56_RS08070;Name=nuoA;gbkey=Gene;gene=nuoA;gene_biotype=protein_coding;locus_tag=PHA56_RS08070;old_locus_tag=PHA56_08070 NZ_CP116214.1 Protein Homology CDS 1666372 1666818 . + 0 ID=cds-WP_004123140.1;Parent=gene-PHA56_RS08070;Dbxref=Genbank:WP_004123140.1;Name=WP_004123140.1;gbkey=CDS;gene=nuoA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002913181.1;locus_tag=PHA56_RS08070;product=NADH-quinone oxidoreductase subunit NuoA;protein_id=WP_004123140.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1666834 1667508 . + . ID=gene-PHA56_RS08075;Name=nuoB;gbkey=Gene;gene=nuoB;gene_biotype=protein_coding;locus_tag=PHA56_RS08075;old_locus_tag=PHA56_08075 NZ_CP116214.1 Protein Homology CDS 1666834 1667508 . + 0 ID=cds-WP_002913178.1;Parent=gene-PHA56_RS08075;Dbxref=Genbank:WP_002913178.1;Name=WP_002913178.1;gbkey=CDS;gene=nuoB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228044.1;locus_tag=PHA56_RS08075;product=NADH-quinone oxidoreductase subunit NuoB;protein_id=WP_002913178.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1667595 1669403 . + . ID=gene-PHA56_RS08080;Name=nuoC;gbkey=Gene;gene=nuoC;gene_biotype=protein_coding;locus_tag=PHA56_RS08080;old_locus_tag=PHA56_08080 NZ_CP116214.1 Protein Homology CDS 1667595 1669403 . + 0 ID=cds-WP_004104077.1;Parent=gene-PHA56_RS08080;Dbxref=Genbank:WP_004104077.1;Name=WP_004104077.1;Ontology_term=GO:0048038,GO:0050136,GO:0051287,GO:0030964;gbkey=CDS;gene=nuoC;go_component=NADH dehydrogenase complex|0030964||IEA;go_function=quinone binding|0048038||IEA,NADH dehydrogenase (quinone) activity|0050136||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228043.1;locus_tag=PHA56_RS08080;product=NADH-quinone oxidoreductase subunit C/D;protein_id=WP_004104077.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1669406 1669906 . + . ID=gene-PHA56_RS08085;Name=nuoE;gbkey=Gene;gene=nuoE;gene_biotype=protein_coding;locus_tag=PHA56_RS08085;old_locus_tag=PHA56_08085 NZ_CP116214.1 Protein Homology CDS 1669406 1669906 . + 0 ID=cds-WP_004104075.1;Parent=gene-PHA56_RS08085;Dbxref=Genbank:WP_004104075.1;Name=WP_004104075.1;Ontology_term=GO:0016491;gbkey=CDS;gene=nuoE;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228042.1;locus_tag=PHA56_RS08085;product=NADH-quinone oxidoreductase subunit NuoE;protein_id=WP_004104075.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1669903 1671240 . + . ID=gene-PHA56_RS08090;Name=nuoF;gbkey=Gene;gene=nuoF;gene_biotype=protein_coding;locus_tag=PHA56_RS08090;old_locus_tag=PHA56_08090 NZ_CP116214.1 Protein Homology CDS 1669903 1671240 . + 0 ID=cds-WP_004852841.1;Parent=gene-PHA56_RS08090;Dbxref=Genbank:WP_004852841.1;Name=WP_004852841.1;Ontology_term=GO:0008137,GO:0051539;gbkey=CDS;gene=nuoF;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228041.1;locus_tag=PHA56_RS08090;product=NADH-quinone oxidoreductase subunit NuoF;protein_id=WP_004852841.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1671273 1673999 . + . ID=gene-PHA56_RS08095;Name=nuoG;gbkey=Gene;gene=nuoG;gene_biotype=protein_coding;locus_tag=PHA56_RS08095;old_locus_tag=PHA56_08095 NZ_CP116214.1 Protein Homology CDS 1671273 1673999 . + 0 ID=cds-WP_014839119.1;Parent=gene-PHA56_RS08095;Dbxref=Genbank:WP_014839119.1;Name=WP_014839119.1;Ontology_term=GO:0006120,GO:0050136;gbkey=CDS;gene=nuoG;go_function=NADH dehydrogenase (quinone) activity|0050136||IEA;go_process=mitochondrial electron transport%2C NADH to ubiquinone|0006120||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017899275.1;locus_tag=PHA56_RS08095;product=NADH-quinone oxidoreductase subunit NuoG;protein_id=WP_014839119.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1673996 1674973 . + . ID=gene-PHA56_RS08100;Name=nuoH;gbkey=Gene;gene=nuoH;gene_biotype=protein_coding;locus_tag=PHA56_RS08100;old_locus_tag=PHA56_08100 NZ_CP116214.1 Protein Homology CDS 1673996 1674973 . + 0 ID=cds-WP_038424738.1;Parent=gene-PHA56_RS08100;Dbxref=Genbank:WP_038424738.1;Name=WP_038424738.1;gbkey=CDS;gene=nuoH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875065.1;locus_tag=PHA56_RS08100;product=NADH-quinone oxidoreductase subunit NuoH;protein_id=WP_038424738.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1674988 1675530 . + . ID=gene-PHA56_RS08105;Name=nuoI;gbkey=Gene;gene=nuoI;gene_biotype=protein_coding;locus_tag=PHA56_RS08105;old_locus_tag=PHA56_08105 NZ_CP116214.1 Protein Homology CDS 1674988 1675530 . + 0 ID=cds-WP_004104066.1;Parent=gene-PHA56_RS08105;Dbxref=Genbank:WP_004104066.1;Name=WP_004104066.1;Ontology_term=GO:0016651,GO:0051539,GO:0016020;gbkey=CDS;gene=nuoI;go_component=membrane|0016020||IEA;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015959823.1;locus_tag=PHA56_RS08105;product=NADH-quinone oxidoreductase subunit NuoI;protein_id=WP_004104066.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1675541 1676095 . + . ID=gene-PHA56_RS08110;Name=nuoJ;gbkey=Gene;gene=nuoJ;gene_biotype=protein_coding;locus_tag=PHA56_RS08110;old_locus_tag=PHA56_08110 NZ_CP116214.1 Protein Homology CDS 1675541 1676095 . + 0 ID=cds-WP_014230252.1;Parent=gene-PHA56_RS08110;Dbxref=Genbank:WP_014230252.1;Name=WP_014230252.1;Ontology_term=GO:0008137;gbkey=CDS;gene=nuoJ;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228037.1;locus_tag=PHA56_RS08110;product=NADH-quinone oxidoreductase subunit J;protein_id=WP_014230252.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1676092 1676394 . + . ID=gene-PHA56_RS08115;Name=nuoK;gbkey=Gene;gene=nuoK;gene_biotype=protein_coding;locus_tag=PHA56_RS08115;old_locus_tag=PHA56_08115 NZ_CP116214.1 Protein Homology CDS 1676092 1676394 . + 0 ID=cds-WP_004104062.1;Parent=gene-PHA56_RS08115;Dbxref=Genbank:WP_004104062.1;Name=WP_004104062.1;Ontology_term=GO:0042773,GO:0016651;gbkey=CDS;gene=nuoK;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006683663.1;locus_tag=PHA56_RS08115;product=NADH-quinone oxidoreductase subunit NuoK;protein_id=WP_004104062.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1676391 1678232 . + . ID=gene-PHA56_RS08120;Name=nuoL;gbkey=Gene;gene=nuoL;gene_biotype=protein_coding;locus_tag=PHA56_RS08120;old_locus_tag=PHA56_08120 NZ_CP116214.1 Protein Homology CDS 1676391 1678232 . + 0 ID=cds-WP_025106678.1;Parent=gene-PHA56_RS08120;Dbxref=Genbank:WP_025106678.1;Name=WP_025106678.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=nuoL;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129466.1;locus_tag=PHA56_RS08120;product=NADH-quinone oxidoreductase subunit L;protein_id=WP_025106678.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1678396 1679925 . + . ID=gene-PHA56_RS08125;Name=nuoM;gbkey=Gene;gene=nuoM;gene_biotype=protein_coding;locus_tag=PHA56_RS08125;old_locus_tag=PHA56_08125 NZ_CP116214.1 Protein Homology CDS 1678396 1679925 . + 0 ID=cds-WP_004104059.1;Parent=gene-PHA56_RS08125;Dbxref=Genbank:WP_004104059.1;Name=WP_004104059.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=nuoM;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129465.1;locus_tag=PHA56_RS08125;product=NADH-quinone oxidoreductase subunit M;protein_id=WP_004104059.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1679932 1681389 . + . ID=gene-PHA56_RS08130;Name=nuoN;gbkey=Gene;gene=nuoN;gene_biotype=protein_coding;locus_tag=PHA56_RS08130;old_locus_tag=PHA56_08130 NZ_CP116214.1 Protein Homology CDS 1679932 1681389 . + 0 ID=cds-WP_004852828.1;Parent=gene-PHA56_RS08130;Dbxref=Genbank:WP_004852828.1;Name=WP_004852828.1;Ontology_term=GO:0008137;gbkey=CDS;gene=nuoN;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228033.1;locus_tag=PHA56_RS08130;product=NADH-quinone oxidoreductase subunit NuoN;protein_id=WP_004852828.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1681591 1682142 . + . ID=gene-PHA56_RS08135;Name=PHA56_RS08135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS08135;old_locus_tag=PHA56_08135 NZ_CP116214.1 Protein Homology CDS 1681591 1682142 . + 0 ID=cds-WP_014839116.1;Parent=gene-PHA56_RS08135;Dbxref=Genbank:WP_014839116.1;Name=WP_014839116.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014839116.1;locus_tag=PHA56_RS08135;product=tyrosine-type DNA invertase;protein_id=WP_014839116.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1682568 1683104 . + . ID=gene-PHA56_RS08140;Name=PHA56_RS08140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS08140;old_locus_tag=PHA56_08140 NZ_CP116214.1 Protein Homology CDS 1682568 1683104 . + 0 ID=cds-WP_014839114.1;Parent=gene-PHA56_RS08140;Dbxref=Genbank:WP_014839114.1;Name=WP_014839114.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004123117.1;locus_tag=PHA56_RS08140;product=fimbrial protein;protein_id=WP_014839114.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1683167 1683829 . + . ID=gene-PHA56_RS08145;Name=PHA56_RS08145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS08145;old_locus_tag=PHA56_08145 NZ_CP116214.1 Protein Homology CDS 1683167 1683829 . + 0 ID=cds-WP_014230248.1;Parent=gene-PHA56_RS08145;Dbxref=Genbank:WP_014230248.1;Name=WP_014230248.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004104055.1;locus_tag=PHA56_RS08145;product=molecular chaperone;protein_id=WP_014230248.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1683860 1686409 . + . ID=gene-PHA56_RS08150;Name=PHA56_RS08150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS08150;old_locus_tag=PHA56_08150 NZ_CP116214.1 Protein Homology CDS 1683860 1686409 . + 0 ID=cds-WP_038424737.1;Parent=gene-PHA56_RS08150;Dbxref=Genbank:WP_038424737.1;Name=WP_038424737.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014230247.1;locus_tag=PHA56_RS08150;product=fimbrial biogenesis outer membrane usher protein;protein_id=WP_038424737.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1686429 1687469 . + . ID=gene-PHA56_RS08155;Name=PHA56_RS08155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS08155;old_locus_tag=PHA56_08155 NZ_CP116214.1 Protein Homology CDS 1686429 1687469 . + 0 ID=cds-WP_014230246.1;Parent=gene-PHA56_RS08155;Dbxref=Genbank:WP_014230246.1;Name=WP_014230246.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014230246.1;locus_tag=PHA56_RS08155;product=fimbrial protein;protein_id=WP_014230246.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1687482 1687991 . + . ID=gene-PHA56_RS08160;Name=PHA56_RS08160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS08160;old_locus_tag=PHA56_08160 NZ_CP116214.1 Protein Homology CDS 1687482 1687991 . + 0 ID=cds-WP_014839112.1;Parent=gene-PHA56_RS08160;Dbxref=Genbank:WP_014839112.1;Name=WP_014839112.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009654661.1;locus_tag=PHA56_RS08160;product=fimbrial protein;protein_id=WP_014839112.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1688025 1688555 . + . ID=gene-PHA56_RS08165;Name=PHA56_RS08165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS08165;old_locus_tag=PHA56_08165 NZ_CP116214.1 Protein Homology CDS 1688025 1688555 . + 0 ID=cds-WP_025106684.1;Parent=gene-PHA56_RS08165;Dbxref=Genbank:WP_025106684.1;Name=WP_025106684.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004114230.1;locus_tag=PHA56_RS08165;product=tyrosine-type recombinase/integrase;protein_id=WP_025106684.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1688602 1689522 . - . ID=gene-PHA56_RS08170;Name=rnz;gbkey=Gene;gene=rnz;gene_biotype=protein_coding;locus_tag=PHA56_RS08170;old_locus_tag=PHA56_08170 NZ_CP116214.1 Protein Homology CDS 1688602 1689522 . - 0 ID=cds-WP_038424736.1;Parent=gene-PHA56_RS08170;Dbxref=Genbank:WP_038424736.1;Name=WP_038424736.1;Ontology_term=GO:0042779,GO:0016891;gbkey=CDS;gene=rnz;go_function=endoribonuclease activity%2C producing 5'-phosphomonoesters|0016891||IEA;go_process=tRNA 3'-trailer cleavage|0042779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004114227.1;locus_tag=PHA56_RS08170;product=ribonuclease Z;protein_id=WP_038424736.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1689707 1690168 . + . ID=gene-PHA56_RS08175;Name=PHA56_RS08175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS08175;old_locus_tag=PHA56_08175 NZ_CP116214.1 Protein Homology CDS 1689707 1690168 . + 0 ID=cds-WP_004852808.1;Parent=gene-PHA56_RS08175;Dbxref=Genbank:WP_004852808.1;Name=WP_004852808.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004123108.1;locus_tag=PHA56_RS08175;product=GNAT family N-acetyltransferase;protein_id=WP_004852808.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1690266 1691561 . + . ID=gene-PHA56_RS08180;Name=menF;gbkey=Gene;gene=menF;gene_biotype=protein_coding;locus_tag=PHA56_RS08180;old_locus_tag=PHA56_08180 NZ_CP116214.1 Protein Homology CDS 1690266 1691561 . + 0 ID=cds-WP_038424735.1;Parent=gene-PHA56_RS08180;Dbxref=Genbank:WP_038424735.1;Name=WP_038424735.1;Ontology_term=GO:0008909;gbkey=CDS;gene=menF;go_function=isochorismate synthase activity|0008909||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014839109.1;locus_tag=PHA56_RS08180;product=isochorismate synthase MenF;protein_id=WP_038424735.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1691639 1693309 . + . ID=gene-PHA56_RS08185;Name=menD;gbkey=Gene;gene=menD;gene_biotype=protein_coding;locus_tag=PHA56_RS08185;old_locus_tag=PHA56_08185 NZ_CP116214.1 Protein Homology CDS 1691639 1693309 . + 0 ID=cds-WP_038424734.1;Parent=gene-PHA56_RS08185;Dbxref=Genbank:WP_038424734.1;Name=WP_038424734.1;Ontology_term=GO:0009234,GO:0070204;gbkey=CDS;gene=menD;go_function=2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase activity|0070204||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228029.1;locus_tag=PHA56_RS08185;product=2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase;protein_id=WP_038424734.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1693306 1694064 . + . ID=gene-PHA56_RS08190;Name=menH;gbkey=Gene;gene=menH;gene_biotype=protein_coding;locus_tag=PHA56_RS08190;old_locus_tag=PHA56_08190 NZ_CP116214.1 Protein Homology CDS 1693306 1694064 . + 0 ID=cds-WP_038424733.1;Parent=gene-PHA56_RS08190;Dbxref=Genbank:WP_038424733.1;Name=WP_038424733.1;Ontology_term=GO:0009234,GO:0070205;gbkey=CDS;gene=menH;go_function=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase activity|0070205||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015958756.1;locus_tag=PHA56_RS08190;product=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase;protein_id=WP_038424733.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1694079 1694936 . + . ID=gene-PHA56_RS08195;Name=menB;gbkey=Gene;gene=menB;gene_biotype=protein_coding;locus_tag=PHA56_RS08195;old_locus_tag=PHA56_08195 NZ_CP116214.1 Protein Homology CDS 1694079 1694936 . + 0 ID=cds-WP_004123101.1;Parent=gene-PHA56_RS08195;Dbxref=Genbank:WP_004123101.1;Name=WP_004123101.1;Ontology_term=GO:0009234,GO:0008935;gbkey=CDS;gene=menB;go_function=1%2C4-dihydroxy-2-naphthoyl-CoA synthase activity|0008935||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228027.1;locus_tag=PHA56_RS08195;product=1%2C4-dihydroxy-2-naphthoyl-CoA synthase;protein_id=WP_004123101.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1694936 1695901 . + . ID=gene-PHA56_RS08200;Name=menC;gbkey=Gene;gene=menC;gene_biotype=protein_coding;locus_tag=PHA56_RS08200;old_locus_tag=PHA56_08200 NZ_CP116214.1 Protein Homology CDS 1694936 1695901 . + 0 ID=cds-WP_032694823.1;Parent=gene-PHA56_RS08200;Dbxref=Genbank:WP_032694823.1;Name=WP_032694823.1;Ontology_term=GO:0009234,GO:0000287,GO:0016836;gbkey=CDS;gene=menC;go_function=magnesium ion binding|0000287||IEA,hydro-lyase activity|0016836||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228026.1;locus_tag=PHA56_RS08200;product=o-succinylbenzoate synthase;protein_id=WP_032694823.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1695898 1697289 . + . ID=gene-PHA56_RS08205;Name=menE;gbkey=Gene;gene=menE;gene_biotype=protein_coding;locus_tag=PHA56_RS08205;old_locus_tag=PHA56_08205 NZ_CP116214.1 Protein Homology CDS 1695898 1697289 . + 0 ID=cds-WP_038424732.1;Parent=gene-PHA56_RS08205;Dbxref=Genbank:WP_038424732.1;Name=WP_038424732.1;Ontology_term=GO:0009234,GO:0005524,GO:0008756;gbkey=CDS;gene=menE;go_function=ATP binding|0005524||IEA,o-succinylbenzoate-CoA ligase activity|0008756||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014839105.1;locus_tag=PHA56_RS08205;product=o-succinylbenzoate--CoA ligase;protein_id=WP_038424732.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1697266 1697889 . - . ID=gene-PHA56_RS08210;Name=PHA56_RS08210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS08210;old_locus_tag=PHA56_08210 NZ_CP116214.1 Protein Homology CDS 1697266 1697889 . - 0 ID=cds-WP_038424731.1;Parent=gene-PHA56_RS08210;Dbxref=Genbank:WP_038424731.1;Name=WP_038424731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009653985.1;locus_tag=PHA56_RS08210;product=DUF2238 domain-containing protein;protein_id=WP_038424731.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1697995 1699515 . - . ID=gene-PHA56_RS08215;Name=PHA56_RS08215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS08215;old_locus_tag=PHA56_08215 NZ_CP116214.1 Protein Homology CDS 1697995 1699515 . - 0 ID=cds-WP_014230236.1;Parent=gene-PHA56_RS08215;Dbxref=Genbank:WP_014230236.1;Name=WP_014230236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004104031.1;locus_tag=PHA56_RS08215;product=tripartite tricarboxylate transporter permease;protein_id=WP_014230236.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1699527 1699958 . - . ID=gene-PHA56_RS08220;Name=PHA56_RS08220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS08220;old_locus_tag=PHA56_08220 NZ_CP116214.1 Protein Homology CDS 1699527 1699958 . - 0 ID=cds-WP_032718777.1;Parent=gene-PHA56_RS08220;Dbxref=Genbank:WP_032718777.1;Name=WP_032718777.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004133992.1;locus_tag=PHA56_RS08220;product=tripartite tricarboxylate transporter TctB family protein;protein_id=WP_032718777.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1699974 1700948 . - . ID=gene-PHA56_RS08225;Name=PHA56_RS08225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS08225;old_locus_tag=PHA56_08225 NZ_CP116214.1 Protein Homology CDS 1699974 1700948 . - 0 ID=cds-WP_171817017.1;Parent=gene-PHA56_RS08225;Dbxref=Genbank:WP_171817017.1;Name=WP_171817017.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017899284.1;locus_tag=PHA56_RS08225;product=tripartite tricarboxylate transporter substrate binding protein;protein_id=WP_171817017.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1701089 1701763 . + . ID=gene-PHA56_RS08230;Name=tctD;gbkey=Gene;gene=tctD;gene_biotype=protein_coding;locus_tag=PHA56_RS08230;old_locus_tag=PHA56_08230 NZ_CP116214.1 Protein Homology CDS 1701089 1701763 . + 0 ID=cds-WP_014230233.1;Parent=gene-PHA56_RS08230;Dbxref=Genbank:WP_014230233.1;Name=WP_014230233.1;gbkey=CDS;gene=tctD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461711.1;locus_tag=PHA56_RS08230;product=transcriptional regulator TctD;protein_id=WP_014230233.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1701750 1703165 . + . ID=gene-PHA56_RS08235;Name=PHA56_RS08235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS08235;old_locus_tag=PHA56_08235 NZ_CP116214.1 Protein Homology CDS 1701750 1703165 . + 0 ID=cds-WP_119834330.1;Parent=gene-PHA56_RS08235;Dbxref=Genbank:WP_119834330.1;Name=WP_119834330.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004104022.1;locus_tag=PHA56_RS08235;product=sensor histidine kinase;protein_id=WP_119834330.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1703157 1703582 . - . ID=gene-PHA56_RS08240;Name=nudI;gbkey=Gene;gene=nudI;gene_biotype=protein_coding;locus_tag=PHA56_RS08240;old_locus_tag=PHA56_08240 NZ_CP116214.1 Protein Homology CDS 1703157 1703582 . - 0 ID=cds-WP_014230231.1;Parent=gene-PHA56_RS08240;Dbxref=Genbank:WP_014230231.1;Name=WP_014230231.1;Ontology_term=GO:0016818;gbkey=CDS;gene=nudI;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311166.1;locus_tag=PHA56_RS08240;product=nucleoside triphosphatase NudI;protein_id=WP_014230231.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1703720 1704712 . + . ID=gene-PHA56_RS08245;Name=PHA56_RS08245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS08245;old_locus_tag=PHA56_08245 NZ_CP116214.1 Protein Homology CDS 1703720 1704712 . + 0 ID=cds-WP_038424728.1;Parent=gene-PHA56_RS08245;Dbxref=Genbank:WP_038424728.1;Name=WP_038424728.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012548938.1;locus_tag=PHA56_RS08245;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=WP_038424728.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1704761 1706209 . - . ID=gene-PHA56_RS08250;Name=PHA56_RS08250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS08250;old_locus_tag=PHA56_08250 NZ_CP116214.1 Protein Homology CDS 1704761 1706209 . - 0 ID=cds-WP_119834331.1;Parent=gene-PHA56_RS08250;Dbxref=Genbank:WP_119834331.1;Name=WP_119834331.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004123083.1;locus_tag=PHA56_RS08250;product=catalase;protein_id=WP_119834331.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1706479 1707021 . + . ID=gene-PHA56_RS08255;Name=PHA56_RS08255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS08255;old_locus_tag=PHA56_08255 NZ_CP116214.1 Protein Homology CDS 1706479 1707021 . + 0 ID=cds-WP_004123076.1;Parent=gene-PHA56_RS08255;Dbxref=Genbank:WP_004123076.1;Name=WP_004123076.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228021.1;locus_tag=PHA56_RS08255;product=YfaZ family outer membrane protein;protein_id=WP_004123076.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1707118 1708314 . + . ID=gene-PHA56_RS08260;Name=PHA56_RS08260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS08260;old_locus_tag=PHA56_08260 NZ_CP116214.1 Protein Homology CDS 1707118 1708314 . + 0 ID=cds-WP_014230228.1;Parent=gene-PHA56_RS08260;Dbxref=Genbank:WP_014230228.1;Name=WP_014230228.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014230228.1;locus_tag=PHA56_RS08260;product=nicotinamide mononucleotide deamidase-related protein YfaY;protein_id=WP_014230228.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1708519 1709301 . + . ID=gene-PHA56_RS08265;Name=PHA56_RS08265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS08265;old_locus_tag=PHA56_08265 NZ_CP116214.1 Protein Homology CDS 1708519 1709301 . + 0 ID=cds-WP_004852774.1;Parent=gene-PHA56_RS08265;Dbxref=Genbank:WP_004852774.1;Name=WP_004852774.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311163.1;locus_tag=PHA56_RS08265;product=IclR family transcriptional regulator;protein_id=WP_004852774.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1709315 1710520 . + . ID=gene-PHA56_RS08270;Name=rhmD;gbkey=Gene;gene=rhmD;gene_biotype=protein_coding;locus_tag=PHA56_RS08270;old_locus_tag=PHA56_08270 NZ_CP116214.1 Protein Homology CDS 1709315 1710520 . + 0 ID=cds-WP_014839100.1;Parent=gene-PHA56_RS08270;Dbxref=Genbank:WP_014839100.1;Name=WP_014839100.1;Ontology_term=GO:0050032;gbkey=CDS;gene=rhmD;go_function=L-rhamnonate dehydratase activity|0050032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311162.2;locus_tag=PHA56_RS08270;product=L-rhamnonate dehydratase;protein_id=WP_014839100.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1710573 1711862 . + . ID=gene-PHA56_RS08275;Name=PHA56_RS08275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS08275;old_locus_tag=PHA56_08275 NZ_CP116214.1 Protein Homology CDS 1710573 1711862 . + 0 ID=cds-WP_004852770.1;Parent=gene-PHA56_RS08275;Dbxref=Genbank:WP_004852770.1;Name=WP_004852770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228017.1;locus_tag=PHA56_RS08275;product=MFS transporter;protein_id=WP_004852770.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1711877 1712680 . + . ID=gene-PHA56_RS08280;Name=yfaU;gbkey=Gene;gene=yfaU;gene_biotype=protein_coding;locus_tag=PHA56_RS08280;old_locus_tag=PHA56_08280 NZ_CP116214.1 Protein Homology CDS 1711877 1712680 . + 0 ID=cds-WP_014839099.1;Parent=gene-PHA56_RS08280;Dbxref=Genbank:WP_014839099.1;Name=WP_014839099.1;gbkey=CDS;gene=yfaU;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228016.1;locus_tag=PHA56_RS08280;product=2-keto-3-deoxy-L-rhamnonate aldolase;protein_id=WP_014839099.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1712703 1713881 . - . ID=gene-PHA56_RS08285;Name=glpC;gbkey=Gene;gene=glpC;gene_biotype=protein_coding;locus_tag=PHA56_RS08285;old_locus_tag=PHA56_08285 NZ_CP116214.1 Protein Homology CDS 1712703 1713881 . - 0 ID=cds-WP_014839098.1;Parent=gene-PHA56_RS08285;Dbxref=Genbank:WP_014839098.1;Name=WP_014839098.1;Ontology_term=GO:0006071,GO:0004368,GO:0051536,GO:0009331;gbkey=CDS;gene=glpC;go_component=glycerol-3-phosphate dehydrogenase complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=glycerol metabolic process|0006071||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004104007.1;locus_tag=PHA56_RS08285;product=anaerobic glycerol-3-phosphate dehydrogenase subunit GlpC;protein_id=WP_014839098.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1713878 1715137 . - . ID=gene-PHA56_RS08290;Name=glpB;gbkey=Gene;gene=glpB;gene_biotype=protein_coding;locus_tag=PHA56_RS08290;old_locus_tag=PHA56_08290 NZ_CP116214.1 Protein Homology CDS 1713878 1715137 . - 0 ID=cds-WP_038424727.1;Parent=gene-PHA56_RS08290;Dbxref=Genbank:WP_038424727.1;Name=WP_038424727.1;Ontology_term=GO:0004368;gbkey=CDS;gene=glpB;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004852765.1;locus_tag=PHA56_RS08290;product=glycerol-3-phosphate dehydrogenase subunit GlpB;protein_id=WP_038424727.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1715127 1716749 . - . ID=gene-PHA56_RS08295;Name=glpA;gbkey=Gene;gene=glpA;gene_biotype=protein_coding;locus_tag=PHA56_RS08295;old_locus_tag=PHA56_08295 NZ_CP116214.1 Protein Homology CDS 1715127 1716749 . - 0 ID=cds-WP_014230223.1;Parent=gene-PHA56_RS08295;Dbxref=Genbank:WP_014230223.1;Name=WP_014230223.1;Ontology_term=GO:0006072,GO:0046174,GO:0004368,GO:0010181,GO:0050660,GO:0009331;gbkey=CDS;gene=glpA;go_component=glycerol-3-phosphate dehydrogenase complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA,FMN binding|0010181||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA,polyol catabolic process|0046174||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016809059.1;locus_tag=PHA56_RS08295;product=anaerobic glycerol-3-phosphate dehydrogenase subunit A;protein_id=WP_014230223.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1717021 1718367 . + . ID=gene-PHA56_RS08300;Name=glpT;gbkey=Gene;gene=glpT;gene_biotype=protein_coding;locus_tag=PHA56_RS08300;old_locus_tag=PHA56_08300 NZ_CP116214.1 Protein Homology CDS 1717021 1718367 . + 0 ID=cds-WP_014230222.1;Parent=gene-PHA56_RS08300;Dbxref=Genbank:WP_014230222.1;Name=WP_014230222.1;Ontology_term=GO:0015794,GO:0015169,GO:0016020;gbkey=CDS;gene=glpT;go_component=membrane|0016020||IEA;go_function=glycerol-3-phosphate transmembrane transporter activity|0015169||IEA;go_process=glycerol-3-phosphate transmembrane transport|0015794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228012.1;locus_tag=PHA56_RS08300;product=glycerol-3-phosphate transporter;protein_id=WP_014230222.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1718377 1719444 . + . ID=gene-PHA56_RS08305;Name=glpQ;gbkey=Gene;gene=glpQ;gene_biotype=protein_coding;locus_tag=PHA56_RS08305;old_locus_tag=PHA56_08305 NZ_CP116214.1 Protein Homology CDS 1718377 1719444 . + 0 ID=cds-WP_014230221.1;Parent=gene-PHA56_RS08305;Dbxref=Genbank:WP_014230221.1;Name=WP_014230221.1;Ontology_term=GO:0006629,GO:0008081;gbkey=CDS;gene=glpQ;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020078256.1;locus_tag=PHA56_RS08305;product=glycerophosphodiester phosphodiesterase;protein_id=WP_014230221.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1719449 1720405 . - . ID=gene-PHA56_RS08310;Name=PHA56_RS08310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS08310;old_locus_tag=PHA56_08310 NZ_CP116214.1 Protein Homology CDS 1719449 1720405 . - 0 ID=cds-WP_038424726.1;Parent=gene-PHA56_RS08310;Dbxref=Genbank:WP_038424726.1;Name=WP_038424726.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014230220.1;locus_tag=PHA56_RS08310;product=LysR family transcriptional regulator;protein_id=WP_038424726.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1720450 1721994 . - . ID=gene-PHA56_RS08315;Name=PHA56_RS08315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS08315;old_locus_tag=PHA56_08315 NZ_CP116214.1 Protein Homology CDS 1720450 1721994 . - 0 ID=cds-WP_038424725.1;Parent=gene-PHA56_RS08315;Dbxref=Genbank:WP_038424725.1;Name=WP_038424725.1;Ontology_term=GO:0016614,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity%2C acting on CH-OH group of donors|0016614||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014230219.1;locus_tag=PHA56_RS08315;product=GMC family oxidoreductase N-terminal domain-containing protein;protein_id=WP_038424725.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1722187 1722441 . - . ID=gene-PHA56_RS08320;Name=yfaE;gbkey=Gene;gene=yfaE;gene_biotype=protein_coding;locus_tag=PHA56_RS08320;old_locus_tag=PHA56_08320 NZ_CP116214.1 Protein Homology CDS 1722187 1722441 . - 0 ID=cds-WP_004104002.1;Parent=gene-PHA56_RS08320;Dbxref=Genbank:WP_004104002.1;Name=WP_004104002.1;Ontology_term=GO:0051537;gbkey=CDS;gene=yfaE;go_function=2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228010.1;locus_tag=PHA56_RS08320;product=class I ribonucleotide reductase maintenance protein YfaE;protein_id=WP_004104002.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1722441 1723571 . - . ID=gene-PHA56_RS08325;Name=nrdB;gbkey=Gene;gene=nrdB;gene_biotype=protein_coding;locus_tag=PHA56_RS08325;old_locus_tag=PHA56_08325 NZ_CP116214.1 Protein Homology CDS 1722441 1723571 . - 0 ID=cds-WP_004852757.1;Parent=gene-PHA56_RS08325;Dbxref=Genbank:WP_004852757.1;Name=WP_004852757.1;Ontology_term=GO:0009263,GO:0016491;gbkey=CDS;gene=nrdB;go_function=oxidoreductase activity|0016491||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006683700.1;locus_tag=PHA56_RS08325;product=ribonucleotide-diphosphate reductase subunit beta;protein_id=WP_004852757.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1723675 1725960 . - . ID=gene-PHA56_RS08330;Name=nrdA;gbkey=Gene;gene=nrdA;gene_biotype=protein_coding;locus_tag=PHA56_RS08330;old_locus_tag=PHA56_08330 NZ_CP116214.1 Protein Homology CDS 1723675 1725960 . - 0 ID=cds-WP_014839096.1;Parent=gene-PHA56_RS08330;Dbxref=Genbank:WP_014839096.1;Name=WP_014839096.1;Ontology_term=GO:0006260,GO:0004748,GO:0005524;gbkey=CDS;gene=nrdA;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129392.1;locus_tag=PHA56_RS08330;product=ribonucleoside-diphosphate reductase subunit alpha;protein_id=WP_014839096.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1726305 1727033 . - . ID=gene-PHA56_RS08335;Name=ubiG;gbkey=Gene;gene=ubiG;gene_biotype=protein_coding;locus_tag=PHA56_RS08335;old_locus_tag=PHA56_08335 NZ_CP116214.1 Protein Homology CDS 1726305 1727033 . - 0 ID=cds-WP_014230217.1;Parent=gene-PHA56_RS08335;Dbxref=Genbank:WP_014230217.1;Name=WP_014230217.1;Ontology_term=GO:0006744,GO:0008689;gbkey=CDS;gene=ubiG;go_function=3-demethylubiquinone-9 3-O-methyltransferase activity|0008689||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461218.1;locus_tag=PHA56_RS08335;product=bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG;protein_id=WP_014230217.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1727219 1729852 . + . ID=gene-PHA56_RS08340;Name=gyrA;gbkey=Gene;gene=gyrA;gene_biotype=protein_coding;locus_tag=PHA56_RS08340;old_locus_tag=PHA56_08340 NZ_CP116214.1 Protein Homology CDS 1727219 1729852 . + 0 ID=cds-WP_004852752.1;Parent=gene-PHA56_RS08340;Dbxref=Genbank:WP_004852752.1;Name=WP_004852752.1;Ontology_term=GO:0006265,GO:0003916,GO:0003918,GO:0009330;gbkey=CDS;gene=gyrA;go_component=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) complex|0009330||IEA;go_function=DNA topoisomerase activity|0003916||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228006.1;locus_tag=PHA56_RS08340;product=DNA topoisomerase (ATP-hydrolyzing) subunit A;protein_id=WP_004852752.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1729983 1732829 . + . ID=gene-PHA56_RS08345;Name=rcsC;gbkey=Gene;gene=rcsC;gene_biotype=protein_coding;locus_tag=PHA56_RS08345;old_locus_tag=PHA56_08345 NZ_CP116214.1 Protein Homology CDS 1729983 1732829 . + 0 ID=cds-WP_014230216.1;Parent=gene-PHA56_RS08345;Dbxref=Genbank:WP_014230216.1;Name=WP_014230216.1;Ontology_term=GO:0000160,GO:0006355,GO:0018106,GO:0000155,GO:0005524,GO:0016020;gbkey=CDS;gene=rcsC;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,peptidyl-histidine phosphorylation|0018106||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228005.1;locus_tag=PHA56_RS08345;product=two-component system sensor histidine kinase RcsC;protein_id=WP_014230216.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1732874 1733524 . - . ID=gene-PHA56_RS08350;Name=rcsB;gbkey=Gene;gene=rcsB;gene_biotype=protein_coding;locus_tag=PHA56_RS08350;old_locus_tag=PHA56_08350 NZ_CP116214.1 Protein Homology CDS 1732874 1733524 . - 0 ID=cds-WP_004103995.1;Parent=gene-PHA56_RS08350;Dbxref=Genbank:WP_004103995.1;Name=WP_004103995.1;gbkey=CDS;gene=rcsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311133.1;locus_tag=PHA56_RS08350;product=response regulator transcription factor RcsB;protein_id=WP_004103995.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1733541 1736201 . - . ID=gene-PHA56_RS08355;Name=rcsD;gbkey=Gene;gene=rcsD;gene_biotype=protein_coding;locus_tag=PHA56_RS08355;old_locus_tag=PHA56_08355 NZ_CP116214.1 Protein Homology CDS 1733541 1736201 . - 0 ID=cds-WP_014230215.1;Parent=gene-PHA56_RS08355;Dbxref=Genbank:WP_014230215.1;Name=WP_014230215.1;Ontology_term=GO:0000160,GO:0009927,GO:0005886;gbkey=CDS;gene=rcsD;go_component=plasma membrane|0005886||IEA;go_function=histidine phosphotransfer kinase activity|0009927||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228003.1;locus_tag=PHA56_RS08355;product=phosphotransferase RcsD;protein_id=WP_014230215.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1736973 1738091 . + . ID=gene-PHA56_RS08360;Name=PHA56_RS08360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS08360;old_locus_tag=PHA56_08360 NZ_CP116214.1 Protein Homology CDS 1736973 1738091 . + 0 ID=cds-WP_014230214.1;Parent=gene-PHA56_RS08360;Dbxref=Genbank:WP_014230214.1;Name=WP_014230214.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228001.1;locus_tag=PHA56_RS08360;product=porin OmpC;protein_id=WP_014230214.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1738194 1739246 . + . ID=gene-PHA56_RS08365;Name=apbE;gbkey=Gene;gene=apbE;gene_biotype=protein_coding;locus_tag=PHA56_RS08365;old_locus_tag=PHA56_08365 NZ_CP116214.1 Protein Homology CDS 1738194 1739246 . + 0 ID=cds-WP_014230213.1;Parent=gene-PHA56_RS08365;Dbxref=Genbank:WP_014230213.1;Name=WP_014230213.1;Ontology_term=GO:0017013;gbkey=CDS;gene=apbE;go_process=protein flavinylation|0017013||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228000.1;locus_tag=PHA56_RS08365;product=FAD:protein FMN transferase ApbE;protein_id=WP_014230213.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1739319 1740383 . + . ID=gene-PHA56_RS08370;Name=ada;gbkey=Gene;gene=ada;gene_biotype=protein_coding;locus_tag=PHA56_RS08370;old_locus_tag=PHA56_08370 NZ_CP116214.1 Protein Homology CDS 1739319 1740383 . + 0 ID=cds-WP_014230212.1;Parent=gene-PHA56_RS08370;Dbxref=Genbank:WP_014230212.1;Name=WP_014230212.1;Ontology_term=GO:0006281,GO:0006355,GO:0003700;gbkey=CDS;gene=ada;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=DNA repair|0006281||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227999.1;locus_tag=PHA56_RS08370;product=bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada;protein_id=WP_014230212.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1740383 1741033 . + . ID=gene-PHA56_RS08375;Name=alkB;gbkey=Gene;gene=alkB;gene_biotype=protein_coding;locus_tag=PHA56_RS08375;old_locus_tag=PHA56_08375 NZ_CP116214.1 Protein Homology CDS 1740383 1741033 . + 0 ID=cds-WP_014230211.1;Parent=gene-PHA56_RS08375;Dbxref=Genbank:WP_014230211.1;Name=WP_014230211.1;gbkey=CDS;gene=alkB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003845138.1;locus_tag=PHA56_RS08375;product=DNA oxidative demethylase AlkB;protein_id=WP_014230211.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1741110 1742753 . + . ID=gene-PHA56_RS08380;Name=PHA56_RS08380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS08380;old_locus_tag=PHA56_08380 NZ_CP116214.1 Protein Homology CDS 1741110 1742753 . + 0 ID=cds-WP_014230210.1;Parent=gene-PHA56_RS08380;Dbxref=Genbank:WP_014230210.1;Name=WP_014230210.1;Ontology_term=GO:0015833,GO:0140359,GO:1904680;gbkey=CDS;go_function=ABC-type transporter activity|0140359||IEA,peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227997.1;locus_tag=PHA56_RS08380;product=multidrug ABC transporter permease/ATP-binding protein;protein_id=WP_014230210.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1742922 1744358 . + . ID=gene-PHA56_RS08385;Name=mgtE;gbkey=Gene;gene=mgtE;gene_biotype=protein_coding;locus_tag=PHA56_RS08385;old_locus_tag=PHA56_08385 NZ_CP116214.1 Protein Homology CDS 1742922 1744358 . + 0 ID=cds-WP_014230209.1;Parent=gene-PHA56_RS08385;Dbxref=Genbank:WP_014230209.1;Name=WP_014230209.1;Ontology_term=GO:0015693,GO:0015095;gbkey=CDS;gene=mgtE;go_function=magnesium ion transmembrane transporter activity|0015095||IEA;go_process=magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227996.1;locus_tag=PHA56_RS08385;product=magnesium transporter;protein_id=WP_014230209.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1744321 1745568 . - . ID=gene-PHA56_RS08390;Name=PHA56_RS08390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS08390;old_locus_tag=PHA56_08390 NZ_CP116214.1 Protein Homology CDS 1744321 1745568 . - 0 ID=cds-WP_014230208.1;Parent=gene-PHA56_RS08390;Dbxref=Genbank:WP_014230208.1;Name=WP_014230208.1;Ontology_term=GO:0008272,GO:0015116,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=sulfate transmembrane transporter activity|0015116||IEA;go_process=sulfate transport|0008272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009307394.1;locus_tag=PHA56_RS08390;product=SulP family inorganic anion transporter;protein_id=WP_014230208.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1745848 1747482 . + . ID=gene-PHA56_RS08395;Name=mqo;gbkey=Gene;gene=mqo;gene_biotype=protein_coding;locus_tag=PHA56_RS08395;old_locus_tag=PHA56_08395 NZ_CP116214.1 Protein Homology CDS 1745848 1747482 . + 0 ID=cds-WP_014230207.1;Parent=gene-PHA56_RS08395;Dbxref=Genbank:WP_014230207.1;Name=WP_014230207.1;Ontology_term=GO:0006099,GO:0008924;gbkey=CDS;gene=mqo;go_function=malate dehydrogenase (quinone) activity|0008924||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227994.1;locus_tag=PHA56_RS08395;product=malate dehydrogenase (quinone);protein_id=WP_014230207.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1747527 1748018 . - . ID=gene-PHA56_RS08400;Name=eco;gbkey=Gene;gene=eco;gene_biotype=protein_coding;locus_tag=PHA56_RS08400;old_locus_tag=PHA56_08400 NZ_CP116214.1 Protein Homology CDS 1747527 1748018 . - 0 ID=cds-WP_014230206.1;Parent=gene-PHA56_RS08400;Dbxref=Genbank:WP_014230206.1;Name=WP_014230206.1;Ontology_term=GO:0004867;gbkey=CDS;gene=eco;go_function=serine-type endopeptidase inhibitor activity|0004867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227993.1;locus_tag=PHA56_RS08400;product=serine protease inhibitor ecotin;protein_id=WP_014230206.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1748221 1749327 . - . ID=gene-PHA56_RS08405;Name=PHA56_RS08405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS08405;old_locus_tag=PHA56_08405 NZ_CP116214.1 Protein Homology CDS 1748221 1749327 . - 0 ID=cds-WP_009653963.1;Parent=gene-PHA56_RS08405;Dbxref=Genbank:WP_009653963.1;Name=WP_009653963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004123009.1;locus_tag=PHA56_RS08405;product=AI-2E family transporter;protein_id=WP_009653963.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1749670 1749996 . + . ID=gene-PHA56_RS08410;Name=PHA56_RS08410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS08410;old_locus_tag=PHA56_08410 NZ_CP116214.1 GeneMarkS-2+ CDS 1749670 1749996 . + 0 ID=cds-WP_075208269.1;Parent=gene-PHA56_RS08410;Dbxref=Genbank:WP_075208269.1;Name=WP_075208269.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PHA56_RS08410;product=hypothetical protein;protein_id=WP_075208269.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1750309 1750806 . + . ID=gene-PHA56_RS08415;Name=tssB;gbkey=Gene;gene=tssB;gene_biotype=protein_coding;locus_tag=PHA56_RS08415;old_locus_tag=PHA56_08415 NZ_CP116214.1 Protein Homology CDS 1750309 1750806 . + 0 ID=cds-WP_014230205.1;Parent=gene-PHA56_RS08415;Dbxref=Genbank:WP_014230205.1;Name=WP_014230205.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssB;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004851543.1;locus_tag=PHA56_RS08415;product=type VI secretion system contractile sheath small subunit;protein_id=WP_014230205.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1750849 1752393 . + . ID=gene-PHA56_RS08420;Name=tssC;gbkey=Gene;gene=tssC;gene_biotype=protein_coding;locus_tag=PHA56_RS08420;old_locus_tag=PHA56_08420 NZ_CP116214.1 Protein Homology CDS 1750849 1752393 . + 0 ID=cds-WP_164504666.1;Parent=gene-PHA56_RS08420;Dbxref=Genbank:WP_164504666.1;Name=WP_164504666.1;Ontology_term=GO:0033103,GO:0003674,GO:0033104;gbkey=CDS;gene=tssC;go_component=type VI protein secretion system complex|0033104||IEA;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226598.1;locus_tag=PHA56_RS08420;product=type VI secretion system contractile sheath large subunit;protein_id=WP_164504666.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1752412 1753749 . + . ID=gene-PHA56_RS08425;Name=tssK;gbkey=Gene;gene=tssK;gene_biotype=protein_coding;locus_tag=PHA56_RS08425;old_locus_tag=PHA56_08425 NZ_CP116214.1 Protein Homology CDS 1752412 1753749 . + 0 ID=cds-WP_014839089.1;Parent=gene-PHA56_RS08425;Dbxref=Genbank:WP_014839089.1;Name=WP_014839089.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssK;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227577.1;locus_tag=PHA56_RS08425;product=type VI secretion system baseplate subunit TssK;protein_id=WP_014839089.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1753746 1754399 . + . ID=gene-PHA56_RS08430;Name=tssL;gbkey=Gene;gene=tssL;gene_biotype=protein_coding;locus_tag=PHA56_RS08430;old_locus_tag=PHA56_08430 NZ_CP116214.1 Protein Homology CDS 1753746 1754399 . + 0 ID=cds-WP_014839088.1;Parent=gene-PHA56_RS08430;Dbxref=Genbank:WP_014839088.1;Name=WP_014839088.1;gbkey=CDS;gene=tssL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004851537.1;locus_tag=PHA56_RS08430;product=type VI secretion system protein TssL%2C short form;protein_id=WP_014839088.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1754403 1756127 . + . ID=gene-PHA56_RS08435;Name=PHA56_RS08435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS08435;old_locus_tag=PHA56_08435 NZ_CP116214.1 Protein Homology CDS 1754403 1756127 . + 0 ID=cds-WP_171817012.1;Parent=gene-PHA56_RS08435;Dbxref=Genbank:WP_171817012.1;Name=WP_171817012.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010431635.1;locus_tag=PHA56_RS08435;product=OmpA family protein;protein_id=WP_171817012.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1756132 1756623 . + . ID=gene-PHA56_RS08440;Name=hcp;gbkey=Gene;gene=hcp;gene_biotype=protein_coding;locus_tag=PHA56_RS08440;old_locus_tag=PHA56_08440 NZ_CP116214.1 Protein Homology CDS 1756132 1756623 . + 0 ID=cds-WP_014839086.1;Parent=gene-PHA56_RS08440;Dbxref=Genbank:WP_014839086.1;Name=WP_014839086.1;gbkey=CDS;gene=hcp;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226602.1;locus_tag=PHA56_RS08440;product=type VI secretion system effector Hcp;protein_id=WP_014839086.1;transl_table=11 NZ_CP116214.1 RefSeq pseudogene 1756910 1758060 . + . ID=gene-PHA56_RS08445;Name=PHA56_RS08445;end_range=1758060,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS08445;old_locus_tag=PHA56_08445;partial=true;pseudo=true NZ_CP116214.1 Protein Homology CDS 1756910 1758060 . + 0 ID=cds-PHA56_RS08445;Parent=gene-PHA56_RS08445;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0005524,GO:0016887;end_range=1758060,.;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226603.1;locus_tag=PHA56_RS08445;partial=true;product=AAA family ATPase;pseudo=true;transl_table=11 NZ_CP116214.1 RefSeq gene 1758235 1758876 . + . ID=gene-PHA56_RS08450;Name=PHA56_RS08450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS08450;old_locus_tag=PHA56_08450 NZ_CP116214.1 Protein Homology CDS 1758235 1758876 . + 0 ID=cds-WP_014230199.1;Parent=gene-PHA56_RS08450;Dbxref=Genbank:WP_014230199.1;Name=WP_014230199.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000376467.1;locus_tag=PHA56_RS08450;product=hypothetical protein;protein_id=WP_014230199.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1759168 1761783 . + . ID=gene-PHA56_RS08455;Name=vgrG;gbkey=Gene;gene=vgrG;gene_biotype=protein_coding;locus_tag=PHA56_RS08455;old_locus_tag=PHA56_08455 NZ_CP116214.1 Protein Homology CDS 1759168 1761783 . + 0 ID=cds-WP_014839083.1;Parent=gene-PHA56_RS08455;Dbxref=Genbank:WP_014839083.1;Name=WP_014839083.1;gbkey=CDS;gene=vgrG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014230197.1;locus_tag=PHA56_RS08455;product=type VI secretion system tip protein VgrG;protein_id=WP_014839083.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1761776 1762315 . + . ID=gene-PHA56_RS08460;Name=PHA56_RS08460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS08460;old_locus_tag=PHA56_08460 NZ_CP116214.1 Protein Homology CDS 1761776 1762315 . + 0 ID=cds-WP_014230196.1;Parent=gene-PHA56_RS08460;Dbxref=Genbank:WP_014230196.1;Name=WP_014230196.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000073208.1;locus_tag=PHA56_RS08460;product=hypothetical protein;protein_id=WP_014230196.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1762324 1764228 . + . ID=gene-PHA56_RS08465;Name=PHA56_RS08465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS08465;old_locus_tag=PHA56_08465 NZ_CP116214.1 Protein Homology CDS 1762324 1764228 . + 0 ID=cds-WP_014230195.1;Parent=gene-PHA56_RS08465;Dbxref=Genbank:WP_014230195.1;Name=WP_014230195.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014230195.1;locus_tag=PHA56_RS08465;product=LysM domain-containing protein;protein_id=WP_014230195.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1764225 1764905 . + . ID=gene-PHA56_RS08470;Name=PHA56_RS08470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS08470;old_locus_tag=PHA56_08470 NZ_CP116214.1 Protein Homology CDS 1764225 1764905 . + 0 ID=cds-WP_119834333.1;Parent=gene-PHA56_RS08470;Dbxref=Genbank:WP_119834333.1;Name=WP_119834333.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014230194.1;locus_tag=PHA56_RS08470;product=hypothetical protein;protein_id=WP_119834333.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1764935 1765201 . + . ID=gene-PHA56_RS08475;Name=PHA56_RS08475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS08475;old_locus_tag=PHA56_08475 NZ_CP116214.1 Protein Homology CDS 1764935 1765201 . + 0 ID=cds-WP_014230193.1;Parent=gene-PHA56_RS08475;Dbxref=Genbank:WP_014230193.1;Name=WP_014230193.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227552.1;locus_tag=PHA56_RS08475;product=PAAR domain-containing protein;protein_id=WP_014230193.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1765205 1766365 . + . ID=gene-PHA56_RS08480;Name=PHA56_RS08480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS08480;old_locus_tag=PHA56_08480 NZ_CP116214.1 Protein Homology CDS 1765205 1766365 . + 0 ID=cds-WP_014230192.1;Parent=gene-PHA56_RS08480;Dbxref=Genbank:WP_014230192.1;Name=WP_014230192.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014839082.1;locus_tag=PHA56_RS08480;product=hypothetical protein;protein_id=WP_014230192.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1766352 1769771 . + . ID=gene-PHA56_RS08485;Name=PHA56_RS08485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS08485;old_locus_tag=PHA56_08485 NZ_CP116214.1 Protein Homology CDS 1766352 1769771 . + 0 ID=cds-WP_014230191.1;Parent=gene-PHA56_RS08485;Dbxref=Genbank:WP_014230191.1;Name=WP_014230191.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010431595.1;locus_tag=PHA56_RS08485;product=ImcF-related family protein;protein_id=WP_014230191.1;transl_table=11 NZ_CP116214.1 RefSeq pseudogene 1769771 1770130 . + . ID=gene-PHA56_RS08490;Name=PHA56_RS08490;end_range=1770130,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS08490;old_locus_tag=PHA56_08490;partial=true;pseudo=true NZ_CP116214.1 Protein Homology CDS 1769771 1770130 . + 0 ID=cds-PHA56_RS08490;Parent=gene-PHA56_RS08490;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1770130,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211937.1;locus_tag=PHA56_RS08490;partial=true;product=type VI secretion system ImpA family N-terminal domain-containing protein;pseudo=true;transl_table=11 NZ_CP116214.1 RefSeq gene 1770123 1770317 . + . ID=gene-PHA56_RS08495;Name=PHA56_RS08495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS08495;old_locus_tag=PHA56_08495 NZ_CP116214.1 Protein Homology CDS 1770123 1770317 . + 0 ID=cds-WP_014230189.1;Parent=gene-PHA56_RS08495;Dbxref=Genbank:WP_014230189.1;Name=WP_014230189.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014230189.1;locus_tag=PHA56_RS08495;product=hypothetical protein;protein_id=WP_014230189.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1770382 1771116 . + . ID=gene-PHA56_RS08500;Name=PHA56_RS08500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS08500;old_locus_tag=PHA56_08500 NZ_CP116214.1 Protein Homology CDS 1770382 1771116 . + 0 ID=cds-WP_032693683.1;Parent=gene-PHA56_RS08500;Dbxref=Genbank:WP_032693683.1;Name=WP_032693683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014230188.1;locus_tag=PHA56_RS08500;product=hypothetical protein;protein_id=WP_032693683.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1771140 1772903 . + . ID=gene-PHA56_RS08505;Name=tssF;gbkey=Gene;gene=tssF;gene_biotype=protein_coding;locus_tag=PHA56_RS08505;old_locus_tag=PHA56_08505 NZ_CP116214.1 Protein Homology CDS 1771140 1772903 . + 0 ID=cds-WP_014839078.1;Parent=gene-PHA56_RS08505;Dbxref=Genbank:WP_014839078.1;Name=WP_014839078.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssF;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227549.1;locus_tag=PHA56_RS08505;product=type VI secretion system baseplate subunit TssF;protein_id=WP_014839078.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1772858 1773961 . + . ID=gene-PHA56_RS08510;Name=tssG;gbkey=Gene;gene=tssG;gene_biotype=protein_coding;locus_tag=PHA56_RS08510;old_locus_tag=PHA56_08510 NZ_CP116214.1 Protein Homology CDS 1772858 1773961 . + 0 ID=cds-WP_032693684.1;Parent=gene-PHA56_RS08510;Dbxref=Genbank:WP_032693684.1;Name=WP_032693684.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssG;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000553779.1;locus_tag=PHA56_RS08510;product=type VI secretion system baseplate subunit TssG;protein_id=WP_032693684.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1773942 1774478 . + . ID=gene-PHA56_RS08515;Name=tssJ;gbkey=Gene;gene=tssJ;gene_biotype=protein_coding;locus_tag=PHA56_RS08515;old_locus_tag=PHA56_08515 NZ_CP116214.1 Protein Homology CDS 1773942 1774478 . + 0 ID=cds-WP_014230185.1;Parent=gene-PHA56_RS08515;Dbxref=Genbank:WP_014230185.1;Name=WP_014230185.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssJ;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014230185.1;locus_tag=PHA56_RS08515;product=type VI secretion system lipoprotein TssJ;protein_id=WP_014230185.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1774471 1774923 . + . ID=gene-PHA56_RS08520;Name=tssE;gbkey=Gene;gene=tssE;gene_biotype=protein_coding;locus_tag=PHA56_RS08520;old_locus_tag=PHA56_08520 NZ_CP116214.1 Protein Homology CDS 1774471 1774923 . + 0 ID=cds-WP_014230184.1;Parent=gene-PHA56_RS08520;Dbxref=Genbank:WP_014230184.1;Name=WP_014230184.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssE;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016158933.1;locus_tag=PHA56_RS08520;product=type VI secretion system baseplate subunit TssE;protein_id=WP_014230184.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1775217 1775293 . - . ID=gene-PHA56_RS08525;Name=PHA56_RS08525;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA56_RS08525;old_locus_tag=PHA56_08525 NZ_CP116214.1 tRNAscan-SE tRNA 1775217 1775293 . - . ID=rna-PHA56_RS08525;Parent=gene-PHA56_RS08525;anticodon=(pos:complement(1775257..1775259));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS08525;product=tRNA-Pro NZ_CP116214.1 tRNAscan-SE exon 1775217 1775293 . - . ID=exon-PHA56_RS08525-1;Parent=rna-PHA56_RS08525;anticodon=(pos:complement(1775257..1775259));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS08525;product=tRNA-Pro NZ_CP116214.1 RefSeq gene 1775371 1777131 . - . ID=gene-PHA56_RS08530;Name=yejM;gbkey=Gene;gene=yejM;gene_biotype=protein_coding;locus_tag=PHA56_RS08530;old_locus_tag=PHA56_08530 NZ_CP116214.1 Protein Homology CDS 1775371 1777131 . - 0 ID=cds-WP_014230182.1;Parent=gene-PHA56_RS08530;Dbxref=Genbank:WP_014230182.1;Name=WP_014230182.1;Ontology_term=GO:0008484;gbkey=CDS;gene=yejM;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461172.1;locus_tag=PHA56_RS08530;product=LPS biosynthesis-modulating metalloenzyme YejM;protein_id=WP_014230182.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1777151 1777378 . - . ID=gene-PHA56_RS08535;Name=PHA56_RS08535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS08535;old_locus_tag=PHA56_08535 NZ_CP116214.1 Protein Homology CDS 1777151 1777378 . - 0 ID=cds-WP_004133900.1;Parent=gene-PHA56_RS08535;Dbxref=Genbank:WP_004133900.1;Name=WP_004133900.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461171.1;locus_tag=PHA56_RS08535;product=YejL family protein;protein_id=WP_004133900.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1777557 1778564 . + . ID=gene-PHA56_RS08540;Name=yejK;gbkey=Gene;gene=yejK;gene_biotype=protein_coding;locus_tag=PHA56_RS08540;old_locus_tag=PHA56_08540 NZ_CP116214.1 Protein Homology CDS 1777557 1778564 . + 0 ID=cds-WP_004122954.1;Parent=gene-PHA56_RS08540;Dbxref=Genbank:WP_004122954.1;Name=WP_004122954.1;Ontology_term=GO:0009295;gbkey=CDS;gene=yejK;go_component=nucleoid|0009295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227989.1;locus_tag=PHA56_RS08540;product=nucleoid-associated protein YejK;protein_id=WP_004122954.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1778614 1779372 . - . ID=gene-PHA56_RS08545;Name=PHA56_RS08545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS08545;old_locus_tag=PHA56_08545 NZ_CP116214.1 Protein Homology CDS 1778614 1779372 . - 0 ID=cds-WP_014230181.1;Parent=gene-PHA56_RS08545;Dbxref=Genbank:WP_014230181.1;Name=WP_014230181.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009653992.1;locus_tag=PHA56_RS08545;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_014230181.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1779453 1780046 . + . ID=gene-PHA56_RS08550;Name=PHA56_RS08550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS08550;old_locus_tag=PHA56_08550 NZ_CP116214.1 Protein Homology CDS 1779453 1780046 . + 0 ID=cds-WP_014230180.1;Parent=gene-PHA56_RS08550;Dbxref=Genbank:WP_014230180.1;Name=WP_014230180.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014230180.1;locus_tag=PHA56_RS08550;product=NUDIX domain-containing protein;protein_id=WP_014230180.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1780108 1780392 . - . ID=gene-PHA56_RS08555;Name=rplY;gbkey=Gene;gene=rplY;gene_biotype=protein_coding;locus_tag=PHA56_RS08555;old_locus_tag=PHA56_08555 NZ_CP116214.1 Protein Homology CDS 1780108 1780392 . - 0 ID=cds-WP_004114143.1;Parent=gene-PHA56_RS08555;Dbxref=Genbank:WP_004114143.1;Name=WP_004114143.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplY;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000494192.1;locus_tag=PHA56_RS08555;product=50S ribosomal protein L25;protein_id=WP_004114143.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1780530 1782287 . - . ID=gene-PHA56_RS08560;Name=PHA56_RS08560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS08560;old_locus_tag=PHA56_08560 NZ_CP116214.1 Protein Homology CDS 1780530 1782287 . - 0 ID=cds-WP_038424723.1;Parent=gene-PHA56_RS08560;Dbxref=Genbank:WP_038424723.1;Name=WP_038424723.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227983.1;locus_tag=PHA56_RS08560;product=DEAD/DEAH box helicase;protein_id=WP_038424723.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1782436 1783155 . + . ID=gene-PHA56_RS08565;Name=rsuA;gbkey=Gene;gene=rsuA;gene_biotype=protein_coding;locus_tag=PHA56_RS08565;old_locus_tag=PHA56_08565 NZ_CP116214.1 Protein Homology CDS 1782436 1783155 . + 0 ID=cds-WP_014230178.1;Parent=gene-PHA56_RS08565;Dbxref=Genbank:WP_014230178.1;Name=WP_014230178.1;gbkey=CDS;gene=rsuA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227982.1;locus_tag=PHA56_RS08565;product=16S rRNA pseudouridine(516) synthase RsuA;protein_id=WP_014230178.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1783152 1784348 . + . ID=gene-PHA56_RS08570;Name=PHA56_RS08570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS08570;old_locus_tag=PHA56_08570 NZ_CP116214.1 Protein Homology CDS 1783152 1784348 . + 0 ID=cds-WP_014230177.1;Parent=gene-PHA56_RS08570;Dbxref=Genbank:WP_014230177.1;Name=WP_014230177.1;Ontology_term=GO:0042908,GO:1990961,GO:0042910,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic transport|0042908||IEA,xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227981.1;locus_tag=PHA56_RS08570;product=Bcr/CflA family multidrug efflux MFS transporter;protein_id=WP_014230177.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1784679 1785023 . + . ID=gene-PHA56_RS08575;Name=PHA56_RS08575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS08575;old_locus_tag=PHA56_08575 NZ_CP116214.1 Protein Homology CDS 1784679 1785023 . + 0 ID=cds-WP_004122937.1;Parent=gene-PHA56_RS08575;Dbxref=Genbank:WP_004122937.1;Name=WP_004122937.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227980.1;locus_tag=PHA56_RS08575;product=YejG family protein;protein_id=WP_004122937.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1785027 1786616 . - . ID=gene-PHA56_RS08580;Name=yejF;gbkey=Gene;gene=yejF;gene_biotype=protein_coding;locus_tag=PHA56_RS08580;old_locus_tag=PHA56_08580 NZ_CP116214.1 Protein Homology CDS 1785027 1786616 . - 0 ID=cds-WP_014230176.1;Parent=gene-PHA56_RS08580;Dbxref=Genbank:WP_014230176.1;Name=WP_014230176.1;Ontology_term=GO:0006810,GO:0000166,GO:0005524;gbkey=CDS;gene=yejF;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227979.1;locus_tag=PHA56_RS08580;product=microcin C ABC transporter ATP-binding protein YejF;protein_id=WP_014230176.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1786618 1787643 . - . ID=gene-PHA56_RS08585;Name=PHA56_RS08585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS08585;old_locus_tag=PHA56_08585 NZ_CP116214.1 Protein Homology CDS 1786618 1787643 . - 0 ID=cds-WP_004852714.1;Parent=gene-PHA56_RS08585;Dbxref=Genbank:WP_004852714.1;Name=WP_004852714.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227978.1;locus_tag=PHA56_RS08585;product=ABC transporter permease;protein_id=WP_004852714.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1787643 1788737 . - . ID=gene-PHA56_RS08590;Name=PHA56_RS08590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS08590;old_locus_tag=PHA56_08590 NZ_CP116214.1 Protein Homology CDS 1787643 1788737 . - 0 ID=cds-WP_004122930.1;Parent=gene-PHA56_RS08590;Dbxref=Genbank:WP_004122930.1;Name=WP_004122930.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227977.1;locus_tag=PHA56_RS08590;product=microcin C ABC transporter permease YejB;protein_id=WP_004122930.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1788747 1790552 . - . ID=gene-PHA56_RS08595;Name=PHA56_RS08595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS08595;old_locus_tag=PHA56_08595 NZ_CP116214.1 Protein Homology CDS 1788747 1790552 . - 0 ID=cds-WP_032693731.1;Parent=gene-PHA56_RS08595;Dbxref=Genbank:WP_032693731.1;Name=WP_032693731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227976.1;locus_tag=PHA56_RS08595;product=extracellular solute-binding protein;protein_id=WP_032693731.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1790623 1792185 . - . ID=gene-PHA56_RS08600;Name=PHA56_RS08600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS08600;old_locus_tag=PHA56_08600 NZ_CP116214.1 Protein Homology CDS 1790623 1792185 . - 0 ID=cds-WP_014839070.1;Parent=gene-PHA56_RS08600;Dbxref=Genbank:WP_014839070.1;Name=WP_014839070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227975.1;locus_tag=PHA56_RS08600;product=cyclic di-GMP phosphodiesterase;protein_id=WP_014839070.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1792376 1792945 . - . ID=gene-PHA56_RS08605;Name=mepS;gbkey=Gene;gene=mepS;gene_biotype=protein_coding;locus_tag=PHA56_RS08605;old_locus_tag=PHA56_08605 NZ_CP116214.1 Protein Homology CDS 1792376 1792945 . - 0 ID=cds-WP_004122922.1;Parent=gene-PHA56_RS08605;Dbxref=Genbank:WP_004122922.1;Name=WP_004122922.1;gbkey=CDS;gene=mepS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311094.1;locus_tag=PHA56_RS08605;product=bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase;protein_id=WP_004122922.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1793372 1794085 . - . ID=gene-PHA56_RS08610;Name=PHA56_RS08610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS08610;old_locus_tag=PHA56_08610 NZ_CP116214.1 Protein Homology CDS 1793372 1794085 . - 0 ID=cds-WP_025106743.1;Parent=gene-PHA56_RS08610;Dbxref=Genbank:WP_025106743.1;Name=WP_025106743.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014230173.1;locus_tag=PHA56_RS08610;product=phosphatase PAP2 family protein;protein_id=WP_025106743.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1794121 1795098 . - . ID=gene-PHA56_RS08615;Name=PHA56_RS08615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS08615;old_locus_tag=PHA56_08615 NZ_CP116214.1 Protein Homology CDS 1794121 1795098 . - 0 ID=cds-WP_014230172.1;Parent=gene-PHA56_RS08615;Dbxref=Genbank:WP_014230172.1;Name=WP_014230172.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227972.1;locus_tag=PHA56_RS08615;product=GTP-binding protein;protein_id=WP_014230172.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1795217 1796683 . - . ID=gene-PHA56_RS08620;Name=PHA56_RS08620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS08620;old_locus_tag=PHA56_08620 NZ_CP116214.1 Protein Homology CDS 1795217 1796683 . - 0 ID=cds-WP_014839067.1;Parent=gene-PHA56_RS08620;Dbxref=Genbank:WP_014839067.1;Name=WP_014839067.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227971.1;locus_tag=PHA56_RS08620;product=fructuronate reductase;protein_id=WP_014839067.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1796967 1797539 . - . ID=gene-PHA56_RS08625;Name=yeiP;gbkey=Gene;gene=yeiP;gene_biotype=protein_coding;locus_tag=PHA56_RS08625;old_locus_tag=PHA56_08625 NZ_CP116214.1 Protein Homology CDS 1796967 1797539 . - 0 ID=cds-WP_004122911.1;Parent=gene-PHA56_RS08625;Dbxref=Genbank:WP_004122911.1;Name=WP_004122911.1;Ontology_term=GO:0006414,GO:0043043,GO:0003746;gbkey=CDS;gene=yeiP;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA,peptide biosynthetic process|0043043||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007750416.1;locus_tag=PHA56_RS08625;product=elongation factor P-like protein YeiP;protein_id=WP_004122911.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1797688 1797939 . + . ID=gene-PHA56_RS08630;Name=PHA56_RS08630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS08630;old_locus_tag=PHA56_08630 NZ_CP116214.1 Protein Homology CDS 1797688 1797939 . + 0 ID=cds-WP_014230170.1;Parent=gene-PHA56_RS08630;Dbxref=Genbank:WP_014230170.1;Name=WP_014230170.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004852701.1;locus_tag=PHA56_RS08630;product=YkgJ family cysteine cluster protein;protein_id=WP_014230170.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1797964 1799145 . - . ID=gene-PHA56_RS08635;Name=setB;gbkey=Gene;gene=setB;gene_biotype=protein_coding;locus_tag=PHA56_RS08635;old_locus_tag=PHA56_08635 NZ_CP116214.1 Protein Homology CDS 1797964 1799145 . - 0 ID=cds-WP_014230169.1;Parent=gene-PHA56_RS08635;Dbxref=Genbank:WP_014230169.1;Name=WP_014230169.1;Ontology_term=GO:0008643,GO:0055085,GO:0005351,GO:0022857,GO:0016020;gbkey=CDS;gene=setB;go_component=membrane|0016020||IEA;go_function=carbohydrate:proton symporter activity|0005351||IEA,transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227966.1;locus_tag=PHA56_RS08635;product=sugar efflux transporter SetB;protein_id=WP_014230169.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1799477 1800607 . + . ID=gene-PHA56_RS08640;Name=fruB;gbkey=Gene;gene=fruB;gene_biotype=protein_coding;locus_tag=PHA56_RS08640;old_locus_tag=PHA56_08640 NZ_CP116214.1 Protein Homology CDS 1799477 1800607 . + 0 ID=cds-WP_004852698.1;Parent=gene-PHA56_RS08640;Dbxref=Genbank:WP_004852698.1;Name=WP_004852698.1;gbkey=CDS;gene=fruB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227965.1;locus_tag=PHA56_RS08640;product=fused PTS fructose transporter subunit IIA/HPr protein;protein_id=WP_004852698.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1800608 1801546 . + . ID=gene-PHA56_RS08645;Name=fruK;gbkey=Gene;gene=fruK;gene_biotype=protein_coding;locus_tag=PHA56_RS08645;old_locus_tag=PHA56_08645 NZ_CP116214.1 Protein Homology CDS 1800608 1801546 . + 0 ID=cds-WP_004103928.1;Parent=gene-PHA56_RS08645;Dbxref=Genbank:WP_004103928.1;Name=WP_004103928.1;Ontology_term=GO:0008662,GO:0016773;gbkey=CDS;gene=fruK;go_function=1-phosphofructokinase activity|0008662||IEA,phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227964.1;locus_tag=PHA56_RS08645;product=1-phosphofructokinase;protein_id=WP_004103928.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1801563 1803251 . + . ID=gene-PHA56_RS08650;Name=fruA;gbkey=Gene;gene=fruA;gene_biotype=protein_coding;locus_tag=PHA56_RS08650;old_locus_tag=PHA56_08650 NZ_CP116214.1 Protein Homology CDS 1801563 1803251 . + 0 ID=cds-WP_014230167.1;Parent=gene-PHA56_RS08650;Dbxref=Genbank:WP_014230167.1;Name=WP_014230167.1;Ontology_term=GO:0009401,GO:0008982,GO:0022877;gbkey=CDS;gene=fruA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227963.1;locus_tag=PHA56_RS08650;product=PTS fructose transporter subunit IIBC;protein_id=WP_014230167.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1803576 1804511 . + . ID=gene-PHA56_RS08655;Name=PHA56_RS08655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS08655;old_locus_tag=PHA56_08655 NZ_CP116214.1 Protein Homology CDS 1803576 1804511 . + 0 ID=cds-WP_032719921.1;Parent=gene-PHA56_RS08655;Dbxref=Genbank:WP_032719921.1;Name=WP_032719921.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004852693.1;locus_tag=PHA56_RS08655;product=pseudouridine kinase;protein_id=WP_032719921.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1804504 1805439 . + . ID=gene-PHA56_RS08660;Name=PHA56_RS08660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS08660;old_locus_tag=PHA56_08660 NZ_CP116214.1 Protein Homology CDS 1804504 1805439 . + 0 ID=cds-WP_004852691.1;Parent=gene-PHA56_RS08660;Dbxref=Genbank:WP_004852691.1;Name=WP_004852691.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012131595.1;locus_tag=PHA56_RS08660;product=pseudouridine-5'-phosphate glycosidase;protein_id=WP_004852691.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1805535 1806785 . + . ID=gene-PHA56_RS08665;Name=PHA56_RS08665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS08665;old_locus_tag=PHA56_08665 NZ_CP116214.1 Protein Homology CDS 1805535 1806785 . + 0 ID=cds-WP_014230164.1;Parent=gene-PHA56_RS08665;Dbxref=Genbank:WP_014230164.1;Name=WP_014230164.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416669.1;locus_tag=PHA56_RS08665;product=NupC/NupG family nucleoside CNT transporter;protein_id=WP_014230164.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1806817 1807908 . - . ID=gene-PHA56_RS08670;Name=PHA56_RS08670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS08670;old_locus_tag=PHA56_08670 NZ_CP116214.1 Protein Homology CDS 1806817 1807908 . - 0 ID=cds-WP_014839060.1;Parent=gene-PHA56_RS08670;Dbxref=Genbank:WP_014839060.1;Name=WP_014839060.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014230163.1;locus_tag=PHA56_RS08670;product=sugar kinase;protein_id=WP_014839060.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1807910 1808767 . - . ID=gene-PHA56_RS08675;Name=nfo;gbkey=Gene;gene=nfo;gene_biotype=protein_coding;locus_tag=PHA56_RS08675;old_locus_tag=PHA56_08675 NZ_CP116214.1 Protein Homology CDS 1807910 1808767 . - 0 ID=cds-WP_032719905.1;Parent=gene-PHA56_RS08675;Dbxref=Genbank:WP_032719905.1;Name=WP_032719905.1;Ontology_term=GO:0006281,GO:0003677,GO:0008270;gbkey=CDS;gene=nfo;go_function=DNA binding|0003677||IEA,zinc ion binding|0008270||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014230162.1;locus_tag=PHA56_RS08675;product=deoxyribonuclease IV;protein_id=WP_032719905.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1808864 1809913 . - . ID=gene-PHA56_RS08680;Name=PHA56_RS08680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS08680;old_locus_tag=PHA56_08680 NZ_CP116214.1 Protein Homology CDS 1808864 1809913 . - 0 ID=cds-WP_014230161.1;Parent=gene-PHA56_RS08680;Dbxref=Genbank:WP_014230161.1;Name=WP_014230161.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227961.1;locus_tag=PHA56_RS08680;product=YeiH family protein;protein_id=WP_014230161.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1810087 1810953 . + . ID=gene-PHA56_RS08685;Name=yieE;gbkey=Gene;gene=yieE;gene_biotype=protein_coding;locus_tag=PHA56_RS08685;old_locus_tag=PHA56_08685 NZ_CP116214.1 Protein Homology CDS 1810087 1810953 . + 0 ID=cds-WP_014839059.1;Parent=gene-PHA56_RS08685;Dbxref=Genbank:WP_014839059.1;Name=WP_014839059.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=yieE;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227959.1;locus_tag=PHA56_RS08685;product=DNA-binding transcriptional regulator YeiE;protein_id=WP_014839059.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1811113 1812582 . + . ID=gene-PHA56_RS08690;Name=PHA56_RS08690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS08690;old_locus_tag=PHA56_08690 NZ_CP116214.1 Protein Homology CDS 1811113 1812582 . + 0 ID=cds-WP_004852681.1;Parent=gene-PHA56_RS08690;Dbxref=Genbank:WP_004852681.1;Name=WP_004852681.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004852681.1;locus_tag=PHA56_RS08690;product=amino acid permease;protein_id=WP_004852681.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1812886 1814859 . + . ID=gene-PHA56_RS08695;Name=cirA;gbkey=Gene;gene=cirA;gene_biotype=protein_coding;locus_tag=PHA56_RS08695;old_locus_tag=PHA56_08695 NZ_CP116214.1 Protein Homology CDS 1812886 1814859 . + 0 ID=cds-WP_032693692.1;Parent=gene-PHA56_RS08695;Dbxref=Genbank:WP_032693692.1;Name=WP_032693692.1;gbkey=CDS;gene=cirA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461144.1;locus_tag=PHA56_RS08695;product=catecholate siderophore receptor CirA;protein_id=WP_032693692.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1814979 1815815 . - . ID=gene-PHA56_RS08700;Name=fghA;gbkey=Gene;gene=fghA;gene_biotype=protein_coding;locus_tag=PHA56_RS08700;old_locus_tag=PHA56_08700 NZ_CP116214.1 Protein Homology CDS 1814979 1815815 . - 0 ID=cds-WP_038424722.1;Parent=gene-PHA56_RS08700;Dbxref=Genbank:WP_038424722.1;Name=WP_038424722.1;Ontology_term=GO:0046292,GO:0018738;gbkey=CDS;gene=fghA;go_function=S-formylglutathione hydrolase activity|0018738||IEA;go_process=formaldehyde metabolic process|0046292||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009654005.1;locus_tag=PHA56_RS08700;product=S-formylglutathione hydrolase;protein_id=WP_038424722.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1816184 1816852 . + . ID=gene-PHA56_RS08705;Name=folE;gbkey=Gene;gene=folE;gene_biotype=protein_coding;locus_tag=PHA56_RS08705;old_locus_tag=PHA56_08705 NZ_CP116214.1 Protein Homology CDS 1816184 1816852 . + 0 ID=cds-WP_004103895.1;Parent=gene-PHA56_RS08705;Dbxref=Genbank:WP_004103895.1;Name=WP_004103895.1;Ontology_term=GO:0046654,GO:0003934;gbkey=CDS;gene=folE;go_function=GTP cyclohydrolase I activity|0003934||IEA;go_process=tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227954.1;locus_tag=PHA56_RS08705;product=GTP cyclohydrolase I FolE;protein_id=WP_004103895.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1816868 1818025 . + . ID=gene-PHA56_RS08710;Name=PHA56_RS08710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS08710;old_locus_tag=PHA56_08710 NZ_CP116214.1 Protein Homology CDS 1816868 1818025 . + 0 ID=cds-WP_014230156.1;Parent=gene-PHA56_RS08710;Dbxref=Genbank:WP_014230156.1;Name=WP_014230156.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227953.1;locus_tag=PHA56_RS08710;product=DUF418 domain-containing protein YeiB;protein_id=WP_014230156.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1818181 1819203 . + . ID=gene-PHA56_RS08715;Name=galS;gbkey=Gene;gene=galS;gene_biotype=protein_coding;locus_tag=PHA56_RS08715;old_locus_tag=PHA56_08715 NZ_CP116214.1 Protein Homology CDS 1818181 1819203 . + 0 ID=cds-WP_014230155.1;Parent=gene-PHA56_RS08715;Dbxref=Genbank:WP_014230155.1;Name=WP_014230155.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=galS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227952.1;locus_tag=PHA56_RS08715;product=HTH-type transcriptional regulator GalS;protein_id=WP_014230155.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1819493 1820491 . + . ID=gene-PHA56_RS08720;Name=mglB;gbkey=Gene;gene=mglB;gene_biotype=protein_coding;locus_tag=PHA56_RS08720;old_locus_tag=PHA56_08720 NZ_CP116214.1 Protein Homology CDS 1819493 1820491 . + 0 ID=cds-WP_014230154.1;Parent=gene-PHA56_RS08720;Dbxref=Genbank:WP_014230154.1;Name=WP_014230154.1;Ontology_term=GO:0030246;gbkey=CDS;gene=mglB;go_function=carbohydrate binding|0030246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416655.1;locus_tag=PHA56_RS08720;product=galactose/glucose ABC transporter substrate-binding protein MglB;protein_id=WP_014230154.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1820611 1822131 . + . ID=gene-PHA56_RS08725;Name=mglA;gbkey=Gene;gene=mglA;gene_biotype=protein_coding;locus_tag=PHA56_RS08725;old_locus_tag=PHA56_08725 NZ_CP116214.1 Protein Homology CDS 1820611 1822131 . + 0 ID=cds-WP_014230153.1;Parent=gene-PHA56_RS08725;Dbxref=Genbank:WP_014230153.1;Name=WP_014230153.1;Ontology_term=GO:0008643,GO:0005524,GO:0043211,GO:0016020;gbkey=CDS;gene=mglA;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type carbohydrate transporter activity|0043211||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020883197.1;locus_tag=PHA56_RS08725;product=galactose/methyl galactoside ABC transporter ATP-binding protein MglA;protein_id=WP_014230153.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1822147 1823157 . + . ID=gene-PHA56_RS08730;Name=mglC;gbkey=Gene;gene=mglC;gene_biotype=protein_coding;locus_tag=PHA56_RS08730;old_locus_tag=PHA56_08730 NZ_CP116214.1 Protein Homology CDS 1822147 1823157 . + 0 ID=cds-WP_004122861.1;Parent=gene-PHA56_RS08730;Dbxref=Genbank:WP_004122861.1;Name=WP_004122861.1;Ontology_term=GO:0008643,GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mglC;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129205.1;locus_tag=PHA56_RS08730;product=galactose/methyl galactoside ABC transporter permease MglC;protein_id=WP_004122861.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1823349 1824065 . - . ID=gene-PHA56_RS08735;Name=sanA;gbkey=Gene;gene=sanA;gene_biotype=protein_coding;locus_tag=PHA56_RS08735;old_locus_tag=PHA56_08735 NZ_CP116214.1 Protein Homology CDS 1823349 1824065 . - 0 ID=cds-WP_004852661.1;Parent=gene-PHA56_RS08735;Dbxref=Genbank:WP_004852661.1;Name=WP_004852661.1;gbkey=CDS;gene=sanA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227948.1;locus_tag=PHA56_RS08735;product=outer membrane permeability protein SanA;protein_id=WP_004852661.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1824190 1825074 . - . ID=gene-PHA56_RS08740;Name=cdd;gbkey=Gene;gene=cdd;gene_biotype=protein_coding;locus_tag=PHA56_RS08740;old_locus_tag=PHA56_08740 NZ_CP116214.1 Protein Homology CDS 1824190 1825074 . - 0 ID=cds-WP_014839055.1;Parent=gene-PHA56_RS08740;Dbxref=Genbank:WP_014839055.1;Name=WP_014839055.1;Ontology_term=GO:0009972,GO:0004126,GO:0008270;gbkey=CDS;gene=cdd;go_function=cytidine deaminase activity|0004126||IEA,zinc ion binding|0008270||IEA;go_process=cytidine deamination|0009972||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227947.1;locus_tag=PHA56_RS08740;product=cytidine deaminase;protein_id=WP_014839055.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1825202 1825897 . - . ID=gene-PHA56_RS08745;Name=PHA56_RS08745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS08745;old_locus_tag=PHA56_08745 NZ_CP116214.1 Protein Homology CDS 1825202 1825897 . - 0 ID=cds-WP_004122851.1;Parent=gene-PHA56_RS08745;Dbxref=Genbank:WP_004122851.1;Name=WP_004122851.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227946.1;locus_tag=PHA56_RS08745;product=CidB/LrgB family autolysis modulator;protein_id=WP_004122851.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1825894 1826292 . - . ID=gene-PHA56_RS08750;Name=PHA56_RS08750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS08750;old_locus_tag=PHA56_08750 NZ_CP116214.1 Protein Homology CDS 1825894 1826292 . - 0 ID=cds-WP_014230151.1;Parent=gene-PHA56_RS08750;Dbxref=Genbank:WP_014230151.1;Name=WP_014230151.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311060.1;locus_tag=PHA56_RS08750;product=CidA/LrgA family protein;protein_id=WP_014230151.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1826414 1827331 . - . ID=gene-PHA56_RS08755;Name=PHA56_RS08755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS08755;old_locus_tag=PHA56_08755 NZ_CP116214.1 Protein Homology CDS 1826414 1827331 . - 0 ID=cds-WP_004852655.1;Parent=gene-PHA56_RS08755;Dbxref=Genbank:WP_004852655.1;Name=WP_004852655.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004852655.1;locus_tag=PHA56_RS08755;product=LysR family transcriptional regulator;protein_id=WP_004852655.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1827458 1828816 . + . ID=gene-PHA56_RS08760;Name=PHA56_RS08760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS08760;old_locus_tag=PHA56_08760 NZ_CP116214.1 Protein Homology CDS 1827458 1828816 . + 0 ID=cds-WP_032693694.1;Parent=gene-PHA56_RS08760;Dbxref=Genbank:WP_032693694.1;Name=WP_032693694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311058.1;locus_tag=PHA56_RS08760;product=aromatic acid/H+ symport family MFS transporter;protein_id=WP_032693694.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1828828 1829865 . + . ID=gene-PHA56_RS08765;Name=gtdA;gbkey=Gene;gene=gtdA;gene_biotype=protein_coding;locus_tag=PHA56_RS08765;old_locus_tag=PHA56_08765 NZ_CP116214.1 Protein Homology CDS 1828828 1829865 . + 0 ID=cds-WP_014839053.1;Parent=gene-PHA56_RS08765;Dbxref=Genbank:WP_014839053.1;Name=WP_014839053.1;Ontology_term=GO:0047922;gbkey=CDS;gene=gtdA;go_function=gentisate 1%2C2-dioxygenase activity|0047922||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016156973.1;locus_tag=PHA56_RS08765;product=gentisate 1%2C2-dioxygenase;protein_id=WP_014839053.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1829889 1830587 . + . ID=gene-PHA56_RS08770;Name=PHA56_RS08770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS08770;old_locus_tag=PHA56_08770 NZ_CP116214.1 Protein Homology CDS 1829889 1830587 . + 0 ID=cds-WP_014230148.1;Parent=gene-PHA56_RS08770;Dbxref=Genbank:WP_014230148.1;Name=WP_014230148.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461122.1;locus_tag=PHA56_RS08770;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_014230148.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1830596 1831240 . + . ID=gene-PHA56_RS08775;Name=maiA;gbkey=Gene;gene=maiA;gene_biotype=protein_coding;locus_tag=PHA56_RS08775;old_locus_tag=PHA56_08775 NZ_CP116214.1 Protein Homology CDS 1830596 1831240 . + 0 ID=cds-WP_032693695.1;Parent=gene-PHA56_RS08775;Dbxref=Genbank:WP_032693695.1;Name=WP_032693695.1;Ontology_term=GO:0006559,GO:0006572,GO:0016034;gbkey=CDS;gene=maiA;go_function=maleylacetoacetate isomerase activity|0016034||IEA;go_process=L-phenylalanine catabolic process|0006559||IEA,tyrosine catabolic process|0006572||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461121.1;locus_tag=PHA56_RS08775;product=maleylacetoacetate isomerase;protein_id=WP_032693695.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1831249 1832442 . + . ID=gene-PHA56_RS08780;Name=PHA56_RS08780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS08780;old_locus_tag=PHA56_08780 NZ_CP116214.1 Protein Homology CDS 1831249 1832442 . + 0 ID=cds-WP_014839052.1;Parent=gene-PHA56_RS08780;Dbxref=Genbank:WP_014839052.1;Name=WP_014839052.1;Ontology_term=GO:0071949;gbkey=CDS;go_function=FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311054.1;locus_tag=PHA56_RS08780;product=3-hydroxybenzoate 6-monooxygenase;protein_id=WP_014839052.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1832616 1833554 . + . ID=gene-PHA56_RS08785;Name=dusC;gbkey=Gene;gene=dusC;gene_biotype=protein_coding;locus_tag=PHA56_RS08785;old_locus_tag=PHA56_08785 NZ_CP116214.1 Protein Homology CDS 1832616 1833554 . + 0 ID=cds-WP_014230145.1;Parent=gene-PHA56_RS08785;Dbxref=Genbank:WP_014230145.1;Name=WP_014230145.1;Ontology_term=GO:0002943,GO:0017150,GO:0050660;gbkey=CDS;gene=dusC;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA dihydrouridine synthesis|0002943||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014230145.1;locus_tag=PHA56_RS08785;product=tRNA dihydrouridine(16) synthase DusC;protein_id=WP_014230145.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1833707 1834540 . + . ID=gene-PHA56_RS08790;Name=bglG;gbkey=Gene;gene=bglG;gene_biotype=protein_coding;locus_tag=PHA56_RS08790;old_locus_tag=PHA56_08790 NZ_CP116214.1 Protein Homology CDS 1833707 1834540 . + 0 ID=cds-WP_014230144.1;Parent=gene-PHA56_RS08790;Dbxref=Genbank:WP_014230144.1;Name=WP_014230144.1;Ontology_term=GO:0006355;gbkey=CDS;gene=bglG;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004864750.1;locus_tag=PHA56_RS08790;product=transcriptional antiterminator BglG;protein_id=WP_014230144.1;transl_table=11 NZ_CP116214.1 RefSeq pseudogene 1834594 1836565 . + . ID=gene-PHA56_RS08795;Name=bglF;gbkey=Gene;gene=bglF;gene_biotype=pseudogene;locus_tag=PHA56_RS08795;old_locus_tag=PHA56_08795;pseudo=true NZ_CP116214.1 Protein Homology CDS 1834594 1836565 . + 0 ID=cds-PHA56_RS08795;Parent=gene-PHA56_RS08795;Note=frameshifted%3B internal stop;gbkey=CDS;gene=bglF;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227941.1;locus_tag=PHA56_RS08795;product=PTS beta-glucoside transporter subunit IIABC;pseudo=true;transl_table=11 NZ_CP116214.1 RefSeq gene 1836583 1837977 . + . ID=gene-PHA56_RS08800;Name=ascB;gbkey=Gene;gene=ascB;gene_biotype=protein_coding;locus_tag=PHA56_RS08800;old_locus_tag=PHA56_08800 NZ_CP116214.1 Protein Homology CDS 1836583 1837977 . + 0 ID=cds-WP_014230142.1;Parent=gene-PHA56_RS08800;Dbxref=Genbank:WP_014230142.1;Name=WP_014230142.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=ascB;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004114081.1;locus_tag=PHA56_RS08800;product=6-phospho-beta-glucosidase;protein_id=WP_014230142.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1838041 1838775 . - . ID=gene-PHA56_RS08805;Name=PHA56_RS08805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS08805;old_locus_tag=PHA56_08805 NZ_CP116214.1 Protein Homology CDS 1838041 1838775 . - 0 ID=cds-WP_038424721.1;Parent=gene-PHA56_RS08805;Dbxref=Genbank:WP_038424721.1;Name=WP_038424721.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014230141.1;locus_tag=PHA56_RS08805;product=class I SAM-dependent methyltransferase;protein_id=WP_038424721.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1838895 1840334 . + . ID=gene-PHA56_RS08810;Name=mdtQ;gbkey=Gene;gene=mdtQ;gene_biotype=protein_coding;locus_tag=PHA56_RS08810;old_locus_tag=PHA56_08810 NZ_CP116214.1 Protein Homology CDS 1838895 1840334 . + 0 ID=cds-WP_038424720.1;Parent=gene-PHA56_RS08810;Dbxref=Genbank:WP_038424720.1;Name=WP_038424720.1;Ontology_term=GO:0055085,GO:0015562,GO:0016020;gbkey=CDS;gene=mdtQ;go_component=membrane|0016020||IEA;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227938.1;locus_tag=PHA56_RS08810;product=multidrug resistance outer membrane protein MdtQ;protein_id=WP_038424720.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1840440 1841009 . - . ID=gene-PHA56_RS08815;Name=PHA56_RS08815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS08815;old_locus_tag=PHA56_08815 NZ_CP116214.1 Protein Homology CDS 1840440 1841009 . - 0 ID=cds-WP_014230139.1;Parent=gene-PHA56_RS08815;Dbxref=Genbank:WP_014230139.1;Name=WP_014230139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227937.1;locus_tag=PHA56_RS08815;product=DedA family protein;protein_id=WP_014230139.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1841165 1841752 . + . ID=gene-PHA56_RS08820;Name=PHA56_RS08820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS08820;old_locus_tag=PHA56_08820 NZ_CP116214.1 Protein Homology CDS 1841165 1841752 . + 0 ID=cds-WP_004122818.1;Parent=gene-PHA56_RS08820;Dbxref=Genbank:WP_004122818.1;Name=WP_004122818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014170891.1;locus_tag=PHA56_RS08820;product=Yip1 family protein;protein_id=WP_004122818.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1841929 1842876 . + . ID=gene-PHA56_RS08825;Name=pbpG;gbkey=Gene;gene=pbpG;gene_biotype=protein_coding;locus_tag=PHA56_RS08825;old_locus_tag=PHA56_08825 NZ_CP116214.1 Protein Homology CDS 1841929 1842876 . + 0 ID=cds-WP_014230138.1;Parent=gene-PHA56_RS08825;Dbxref=Genbank:WP_014230138.1;Name=WP_014230138.1;Ontology_term=GO:0006508,GO:0009002;gbkey=CDS;gene=pbpG;go_function=serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461113.1;locus_tag=PHA56_RS08825;product=D-alanyl-D-alanine endopeptidase;protein_id=WP_014230138.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1842971 1843525 . - . ID=gene-PHA56_RS08830;Name=PHA56_RS08830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS08830;old_locus_tag=PHA56_08830 NZ_CP116214.1 Protein Homology CDS 1842971 1843525 . - 0 ID=cds-WP_004138576.1;Parent=gene-PHA56_RS08830;Dbxref=Genbank:WP_004138576.1;Name=WP_004138576.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015706095.1;locus_tag=PHA56_RS08830;product=GNAT family N-acetyltransferase;protein_id=WP_004138576.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1843623 1845365 . - . ID=gene-PHA56_RS08835;Name=dld;gbkey=Gene;gene=dld;gene_biotype=protein_coding;locus_tag=PHA56_RS08835;old_locus_tag=PHA56_08835 NZ_CP116214.1 Protein Homology CDS 1843623 1845365 . - 0 ID=cds-WP_004852628.1;Parent=gene-PHA56_RS08835;Dbxref=Genbank:WP_004852628.1;Name=WP_004852628.1;Ontology_term=GO:0006089,GO:0019516,GO:0016901;gbkey=CDS;gene=dld;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C quinone or similar compound as acceptor|0016901||IEA;go_process=lactate metabolic process|0006089||IEA,lactate oxidation|0019516||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014839046.1;locus_tag=PHA56_RS08835;product=D-lactate dehydrogenase;protein_id=WP_004852628.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1845560 1847857 . + . ID=gene-PHA56_RS08840;Name=bglX;gbkey=Gene;gene=bglX;gene_biotype=protein_coding;locus_tag=PHA56_RS08840;old_locus_tag=PHA56_08840 NZ_CP116214.1 Protein Homology CDS 1845560 1847857 . + 0 ID=cds-WP_071889113.1;Parent=gene-PHA56_RS08840;Dbxref=Genbank:WP_071889113.1;Name=WP_071889113.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=bglX;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416636.1;locus_tag=PHA56_RS08840;product=beta-glucosidase BglX;protein_id=WP_071889113.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1848024 1848941 . + . ID=gene-PHA56_RS08845;Name=PHA56_RS08845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS08845;old_locus_tag=PHA56_08845 NZ_CP116214.1 Protein Homology CDS 1848024 1848941 . + 0 ID=cds-WP_014230135.1;Parent=gene-PHA56_RS08845;Dbxref=Genbank:WP_014230135.1;Name=WP_014230135.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461110.1;locus_tag=PHA56_RS08845;product=ABC transporter substrate-binding protein;protein_id=WP_014230135.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1848949 1850106 . + . ID=gene-PHA56_RS08850;Name=PHA56_RS08850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS08850;old_locus_tag=PHA56_08850 NZ_CP116214.1 Protein Homology CDS 1848949 1850106 . + 0 ID=cds-WP_014230134.1;Parent=gene-PHA56_RS08850;Dbxref=Genbank:WP_014230134.1;Name=WP_014230134.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227930.1;locus_tag=PHA56_RS08850;product=ABC transporter permease;protein_id=WP_014230134.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1850099 1851046 . + . ID=gene-PHA56_RS08855;Name=PHA56_RS08855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS08855;old_locus_tag=PHA56_08855 NZ_CP116214.1 Protein Homology CDS 1850099 1851046 . + 0 ID=cds-WP_038424719.1;Parent=gene-PHA56_RS08855;Dbxref=Genbank:WP_038424719.1;Name=WP_038424719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227929.1;locus_tag=PHA56_RS08855;product=ABC transporter ATP-binding protein;protein_id=WP_038424719.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1851030 1851767 . + . ID=gene-PHA56_RS08860;Name=PHA56_RS08860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS08860;old_locus_tag=PHA56_08860 NZ_CP116214.1 Protein Homology CDS 1851030 1851767 . + 0 ID=cds-WP_014230132.1;Parent=gene-PHA56_RS08860;Dbxref=Genbank:WP_014230132.1;Name=WP_014230132.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227928.1;locus_tag=PHA56_RS08860;product=ABC transporter permease subunit;protein_id=WP_014230132.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1851742 1851855 . - . ID=gene-PHA56_RS08865;Name=PHA56_RS08865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS08865;old_locus_tag=PHA56_08865 NZ_CP116214.1 Protein Homology CDS 1851742 1851855 . - 0 ID=cds-WP_004103838.1;Parent=gene-PHA56_RS08865;Dbxref=Genbank:WP_004103838.1;Name=WP_004103838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227927.1;locus_tag=PHA56_RS08865;product=protein YohO;protein_id=WP_004103838.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1852418 1853176 . - . ID=gene-PHA56_RS08870;Name=PHA56_RS08870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS08870;old_locus_tag=PHA56_08870 NZ_CP116214.1 Protein Homology CDS 1852418 1853176 . - 0 ID=cds-WP_014839041.1;Parent=gene-PHA56_RS08870;Dbxref=Genbank:WP_014839041.1;Name=WP_014839041.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004852615.1;locus_tag=PHA56_RS08870;product=MerR family transcriptional regulator;protein_id=WP_014839041.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1853387 1855075 . + . ID=gene-PHA56_RS08875;Name=PHA56_RS08875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS08875;old_locus_tag=PHA56_08875 NZ_CP116214.1 Protein Homology CDS 1853387 1855075 . + 0 ID=cds-WP_004852614.1;Parent=gene-PHA56_RS08875;Dbxref=Genbank:WP_004852614.1;Name=WP_004852614.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227926.1;locus_tag=PHA56_RS08875;product=sensor histidine kinase;protein_id=WP_004852614.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1855069 1855788 . + . ID=gene-PHA56_RS08880;Name=btsR;gbkey=Gene;gene=btsR;gene_biotype=protein_coding;gene_synonym=yehT;locus_tag=PHA56_RS08880;old_locus_tag=PHA56_08880 NZ_CP116214.1 Protein Homology CDS 1855069 1855788 . + 0 ID=cds-WP_014230130.1;Parent=gene-PHA56_RS08880;Dbxref=Genbank:WP_014230130.1;Name=WP_014230130.1;gbkey=CDS;gene=btsR;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227925.1;locus_tag=PHA56_RS08880;product=two-component system response regulator BtsR;protein_id=WP_014230130.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1855842 1856309 . + . ID=gene-PHA56_RS08885;Name=PHA56_RS08885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS08885;old_locus_tag=PHA56_08885 NZ_CP116214.1 Protein Homology CDS 1855842 1856309 . + 0 ID=cds-WP_004852612.1;Parent=gene-PHA56_RS08885;Dbxref=Genbank:WP_004852612.1;Name=WP_004852612.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227924.1;locus_tag=PHA56_RS08885;product=DUF1456 family protein;protein_id=WP_004852612.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1856413 1856880 . - . ID=gene-PHA56_RS08890;Name=PHA56_RS08890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS08890;old_locus_tag=PHA56_08890 NZ_CP116214.1 Protein Homology CDS 1856413 1856880 . - 0 ID=cds-WP_014839039.1;Parent=gene-PHA56_RS08890;Dbxref=Genbank:WP_014839039.1;Name=WP_014839039.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004852611.1;locus_tag=PHA56_RS08890;product=YehR family lipoprotein;protein_id=WP_014839039.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1857081 1859114 . - . ID=gene-PHA56_RS08895;Name=metG;gbkey=Gene;gene=metG;gene_biotype=protein_coding;locus_tag=PHA56_RS08895;old_locus_tag=PHA56_08895 NZ_CP116214.1 Protein Homology CDS 1857081 1859114 . - 0 ID=cds-WP_038424974.1;Parent=gene-PHA56_RS08895;Dbxref=Genbank:WP_038424974.1;Name=WP_038424974.1;Ontology_term=GO:0006431,GO:0000166,GO:0004825,GO:0005524;gbkey=CDS;gene=metG;go_function=nucleotide binding|0000166||IEA,methionine-tRNA ligase activity|0004825||IEA,ATP binding|0005524||IEA;go_process=methionyl-tRNA aminoacylation|0006431||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461099.1;locus_tag=PHA56_RS08895;product=methionine--tRNA ligase;protein_id=WP_038424974.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1859266 1860375 . + . ID=gene-PHA56_RS08900;Name=apbC;gbkey=Gene;gene=apbC;gene_biotype=protein_coding;locus_tag=PHA56_RS08900;old_locus_tag=PHA56_08900 NZ_CP116214.1 Protein Homology CDS 1859266 1860375 . + 0 ID=cds-WP_004103811.1;Parent=gene-PHA56_RS08900;Dbxref=Genbank:WP_004103811.1;Name=WP_004103811.1;Ontology_term=GO:0016226,GO:0005524,GO:0016887,GO:0051536;gbkey=CDS;gene=apbC;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461098.1;locus_tag=PHA56_RS08900;product=iron-sulfur cluster carrier protein ApbC;protein_id=WP_004103811.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1860721 1861053 . + . ID=gene-PHA56_RS08905;Name=PHA56_RS08905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS08905;old_locus_tag=PHA56_08905 NZ_CP116214.1 Protein Homology CDS 1860721 1861053 . + 0 ID=cds-WP_014839037.1;Parent=gene-PHA56_RS08905;Dbxref=Genbank:WP_014839037.1;Name=WP_014839037.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014839037.1;locus_tag=PHA56_RS08905;product=hypothetical protein;protein_id=WP_014839037.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1861108 1861425 . - . ID=gene-PHA56_RS08910;Name=PHA56_RS08910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS08910;old_locus_tag=PHA56_08910 NZ_CP116214.1 Protein Homology CDS 1861108 1861425 . - 0 ID=cds-WP_004852605.1;Parent=gene-PHA56_RS08910;Dbxref=Genbank:WP_004852605.1;Name=WP_004852605.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227918.1;locus_tag=PHA56_RS08910;product=RcnB family protein;protein_id=WP_004852605.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1861595 1862515 . + . ID=gene-PHA56_RS08915;Name=PHA56_RS08915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS08915;old_locus_tag=PHA56_08915 NZ_CP116214.1 Protein Homology CDS 1861595 1862515 . + 0 ID=cds-WP_038424718.1;Parent=gene-PHA56_RS08915;Dbxref=Genbank:WP_038424718.1;Name=WP_038424718.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004852604.1;locus_tag=PHA56_RS08915;product=LysR family transcriptional regulator;protein_id=WP_038424718.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1862795 1864138 . - . ID=gene-PHA56_RS08920;Name=PHA56_RS08920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS08920;old_locus_tag=PHA56_08920 NZ_CP116214.1 Protein Homology CDS 1862795 1864138 . - 0 ID=cds-WP_004852602.1;Parent=gene-PHA56_RS08920;Dbxref=Genbank:WP_004852602.1;Name=WP_004852602.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227916.1;locus_tag=PHA56_RS08920;product=NCS2 family permease;protein_id=WP_004852602.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1864141 1865952 . - . ID=gene-PHA56_RS08925;Name=PHA56_RS08925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS08925;old_locus_tag=PHA56_08925 NZ_CP116214.1 Protein Homology CDS 1864141 1865952 . - 0 ID=cds-WP_014839035.1;Parent=gene-PHA56_RS08925;Dbxref=Genbank:WP_014839035.1;Name=WP_014839035.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227915.1;locus_tag=PHA56_RS08925;product=adenine deaminase C-terminal domain-containing protein;protein_id=WP_014839035.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1866073 1866987 . + . ID=gene-PHA56_RS08930;Name=PHA56_RS08930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS08930;old_locus_tag=PHA56_08930 NZ_CP116214.1 Protein Homology CDS 1866073 1866987 . + 0 ID=cds-WP_162097205.1;Parent=gene-PHA56_RS08930;Dbxref=Genbank:WP_162097205.1;Name=WP_162097205.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227914.1;locus_tag=PHA56_RS08930;product=LysR family transcriptional regulator;protein_id=WP_162097205.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1867041 1867463 . - . ID=gene-PHA56_RS08935;Name=PHA56_RS08935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS08935;old_locus_tag=PHA56_08935 NZ_CP116214.1 Protein Homology CDS 1867041 1867463 . - 0 ID=cds-WP_014230123.1;Parent=gene-PHA56_RS08935;Dbxref=Genbank:WP_014230123.1;Name=WP_014230123.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227913.1;locus_tag=PHA56_RS08935;product=universal stress protein;protein_id=WP_014230123.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1867579 1869555 . - . ID=gene-PHA56_RS08940;Name=PHA56_RS08940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS08940;old_locus_tag=PHA56_08940 NZ_CP116214.1 Protein Homology CDS 1867579 1869555 . - 0 ID=cds-WP_014839034.1;Parent=gene-PHA56_RS08940;Dbxref=Genbank:WP_014839034.1;Name=WP_014839034.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020078314.1;locus_tag=PHA56_RS08940;product=alkyl sulfatase dimerization domain-containing protein;protein_id=WP_014839034.1;transl_table=11 NZ_CP116214.1 cmsearch riboswitch 1869788 1869884 . + . ID=id-NZ_CP116214.1:1869788..1869884;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NZ_CP116214.1 RefSeq gene 1869919 1870692 . + . ID=gene-PHA56_RS08945;Name=thiM;gbkey=Gene;gene=thiM;gene_biotype=protein_coding;locus_tag=PHA56_RS08945;old_locus_tag=PHA56_08945 NZ_CP116214.1 Protein Homology CDS 1869919 1870692 . + 0 ID=cds-WP_014839026.1;Parent=gene-PHA56_RS08945;Dbxref=Genbank:WP_014839026.1;Name=WP_014839026.1;Ontology_term=GO:0009228,GO:0004417;gbkey=CDS;gene=thiM;go_function=hydroxyethylthiazole kinase activity|0004417||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014839026.1;locus_tag=PHA56_RS08945;product=hydroxyethylthiazole kinase;protein_id=WP_014839026.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1870689 1871489 . + . ID=gene-PHA56_RS08950;Name=thiD;gbkey=Gene;gene=thiD;gene_biotype=protein_coding;locus_tag=PHA56_RS08950;old_locus_tag=PHA56_08950 NZ_CP116214.1 Protein Homology CDS 1870689 1871489 . + 0 ID=cds-WP_038424706.1;Parent=gene-PHA56_RS08950;Dbxref=Genbank:WP_038424706.1;Name=WP_038424706.1;Ontology_term=GO:0009228,GO:0008902,GO:0008972;gbkey=CDS;gene=thiD;go_function=hydroxymethylpyrimidine kinase activity|0008902||IEA,phosphomethylpyrimidine kinase activity|0008972||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227910.1;locus_tag=PHA56_RS08950;product=bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;protein_id=WP_038424706.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1871638 1872690 . + . ID=gene-PHA56_RS08955;Name=fbaB;gbkey=Gene;gene=fbaB;gene_biotype=protein_coding;locus_tag=PHA56_RS08955;old_locus_tag=PHA56_08955 NZ_CP116214.1 Protein Homology CDS 1871638 1872690 . + 0 ID=cds-WP_004852587.1;Parent=gene-PHA56_RS08955;Dbxref=Genbank:WP_004852587.1;Name=WP_004852587.1;Ontology_term=GO:0004332;gbkey=CDS;gene=fbaB;go_function=fructose-bisphosphate aldolase activity|0004332||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006820796.1;locus_tag=PHA56_RS08955;product=class I fructose-bisphosphate aldolase;protein_id=WP_004852587.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1872785 1874392 . - . ID=gene-PHA56_RS08960;Name=PHA56_RS08960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS08960;old_locus_tag=PHA56_08960 NZ_CP116214.1 Protein Homology CDS 1872785 1874392 . - 0 ID=cds-WP_038424705.1;Parent=gene-PHA56_RS08960;Dbxref=Genbank:WP_038424705.1;Name=WP_038424705.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227907.1;locus_tag=PHA56_RS08960;product=FGGY-family carbohydrate kinase;protein_id=WP_038424705.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1874423 1875172 . - . ID=gene-PHA56_RS08965;Name=PHA56_RS08965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS08965;old_locus_tag=PHA56_08965 NZ_CP116214.1 Protein Homology CDS 1874423 1875172 . - 0 ID=cds-WP_004852583.1;Parent=gene-PHA56_RS08965;Dbxref=Genbank:WP_004852583.1;Name=WP_004852583.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227906.1;locus_tag=PHA56_RS08965;product=SDR family oxidoreductase;protein_id=WP_004852583.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1875431 1876432 . + . ID=gene-PHA56_RS08970;Name=PHA56_RS08970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS08970;old_locus_tag=PHA56_08970 NZ_CP116214.1 Protein Homology CDS 1875431 1876432 . + 0 ID=cds-WP_014230116.1;Parent=gene-PHA56_RS08970;Dbxref=Genbank:WP_014230116.1;Name=WP_014230116.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014230116.1;locus_tag=PHA56_RS08970;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_014230116.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1876447 1877388 . - . ID=gene-PHA56_RS08975;Name=PHA56_RS08975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS08975;old_locus_tag=PHA56_08975 NZ_CP116214.1 Protein Homology CDS 1876447 1877388 . - 0 ID=cds-WP_014839020.1;Parent=gene-PHA56_RS08975;Dbxref=Genbank:WP_014839020.1;Name=WP_014839020.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227904.1;locus_tag=PHA56_RS08975;product=sugar-binding domain-containing protein;protein_id=WP_014839020.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1877595 1878962 . + . ID=gene-PHA56_RS08980;Name=PHA56_RS08980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS08980;old_locus_tag=PHA56_08980 NZ_CP116214.1 Protein Homology CDS 1877595 1878962 . + 0 ID=cds-WP_032693709.1;Parent=gene-PHA56_RS08980;Dbxref=Genbank:WP_032693709.1;Name=WP_032693709.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227903.1;locus_tag=PHA56_RS08980;product=mannitol dehydrogenase family protein;protein_id=WP_032693709.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1878972 1880435 . + . ID=gene-PHA56_RS08985;Name=xylB;gbkey=Gene;gene=xylB;gene_biotype=protein_coding;locus_tag=PHA56_RS08985;old_locus_tag=PHA56_08985 NZ_CP116214.1 Protein Homology CDS 1878972 1880435 . + 0 ID=cds-WP_042945703.1;Parent=gene-PHA56_RS08985;Dbxref=Genbank:WP_042945703.1;Name=WP_042945703.1;Ontology_term=GO:0005997,GO:0042732,GO:0004856,GO:0005515;gbkey=CDS;gene=xylB;go_function=xylulokinase activity|0004856||IEA,protein binding|0005515||IEA;go_process=xylulose metabolic process|0005997||IEA,D-xylose metabolic process|0042732||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227902.1;locus_tag=PHA56_RS08985;product=xylulokinase;protein_id=WP_042945703.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1880505 1881782 . + . ID=gene-PHA56_RS08990;Name=dalT;gbkey=Gene;gene=dalT;gene_biotype=protein_coding;locus_tag=PHA56_RS08990;old_locus_tag=PHA56_08990 NZ_CP116214.1 Protein Homology CDS 1880505 1881782 . + 0 ID=cds-WP_032693711.1;Parent=gene-PHA56_RS08990;Dbxref=Genbank:WP_032693711.1;Name=WP_032693711.1;gbkey=CDS;gene=dalT;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227901.1;locus_tag=PHA56_RS08990;product=D-arabinitol transporter;protein_id=WP_032693711.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1881831 1882493 . + . ID=gene-PHA56_RS08995;Name=PHA56_RS08995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS08995;old_locus_tag=PHA56_08995 NZ_CP116214.1 Protein Homology CDS 1881831 1882493 . + 0 ID=cds-WP_038424703.1;Parent=gene-PHA56_RS08995;Dbxref=Genbank:WP_038424703.1;Name=WP_038424703.1;Ontology_term=GO:0008152,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014230111.1;locus_tag=PHA56_RS08995;product=HAD-IA family hydrolase;protein_id=WP_038424703.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1882793 1883947 . + . ID=gene-PHA56_RS09000;Name=PHA56_RS09000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS09000;old_locus_tag=PHA56_09000 NZ_CP116214.1 Protein Homology CDS 1882793 1883947 . + 0 ID=cds-WP_032693712.1;Parent=gene-PHA56_RS09000;Dbxref=Genbank:WP_032693712.1;Name=WP_032693712.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227899.1;locus_tag=PHA56_RS09000;product=mandelate racemase family protein;protein_id=WP_032693712.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1884067 1885689 . + . ID=gene-PHA56_RS09005;Name=PHA56_RS09005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS09005;old_locus_tag=PHA56_09005 NZ_CP116214.1 Protein Homology CDS 1884067 1885689 . + 0 ID=cds-WP_038424702.1;Parent=gene-PHA56_RS09005;Dbxref=Genbank:WP_038424702.1;Name=WP_038424702.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227898.1;locus_tag=PHA56_RS09005;product=ABC transporter substrate-binding protein;protein_id=WP_038424702.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1885686 1886723 . + . ID=gene-PHA56_RS09010;Name=PHA56_RS09010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS09010;old_locus_tag=PHA56_09010 NZ_CP116214.1 Protein Homology CDS 1885686 1886723 . + 0 ID=cds-WP_038424701.1;Parent=gene-PHA56_RS09010;Dbxref=Genbank:WP_038424701.1;Name=WP_038424701.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227897.1;locus_tag=PHA56_RS09010;product=ABC transporter permease;protein_id=WP_038424701.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1886720 1887625 . + . ID=gene-PHA56_RS09015;Name=PHA56_RS09015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS09015;old_locus_tag=PHA56_09015 NZ_CP116214.1 Protein Homology CDS 1886720 1887625 . + 0 ID=cds-WP_025107786.1;Parent=gene-PHA56_RS09015;Dbxref=Genbank:WP_025107786.1;Name=WP_025107786.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227896.1;locus_tag=PHA56_RS09015;product=ABC transporter permease;protein_id=WP_025107786.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1887597 1888460 . + . ID=gene-PHA56_RS09020;Name=PHA56_RS09020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS09020;old_locus_tag=PHA56_09020 NZ_CP116214.1 Protein Homology CDS 1887597 1888460 . + 0 ID=cds-WP_014230106.1;Parent=gene-PHA56_RS09020;Dbxref=Genbank:WP_014230106.1;Name=WP_014230106.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227895.1;locus_tag=PHA56_RS09020;product=ABC transporter ATP-binding protein;protein_id=WP_014230106.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1888471 1889244 . + . ID=gene-PHA56_RS09025;Name=PHA56_RS09025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS09025;old_locus_tag=PHA56_09025 NZ_CP116214.1 Protein Homology CDS 1888471 1889244 . + 0 ID=cds-WP_014230105.1;Parent=gene-PHA56_RS09025;Dbxref=Genbank:WP_014230105.1;Name=WP_014230105.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227894.1;locus_tag=PHA56_RS09025;product=ABC transporter ATP-binding protein;protein_id=WP_014230105.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1889661 1890461 . + . ID=gene-PHA56_RS09030;Name=PHA56_RS09030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS09030;old_locus_tag=PHA56_09030 NZ_CP116214.1 Protein Homology CDS 1889661 1890461 . + 0 ID=cds-WP_032693715.1;Parent=gene-PHA56_RS09030;Dbxref=Genbank:WP_032693715.1;Name=WP_032693715.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009654020.1;locus_tag=PHA56_RS09030;product=winged helix-turn-helix domain-containing protein;protein_id=WP_032693715.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1890448 1890918 . + . ID=gene-PHA56_RS09035;Name=PHA56_RS09035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS09035;old_locus_tag=PHA56_09035 NZ_CP116214.1 Protein Homology CDS 1890448 1890918 . + 0 ID=cds-WP_014230103.1;Parent=gene-PHA56_RS09035;Dbxref=Genbank:WP_014230103.1;Name=WP_014230103.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004852557.1;locus_tag=PHA56_RS09035;product=hypothetical protein;protein_id=WP_014230103.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1890919 1891812 . - . ID=gene-PHA56_RS09040;Name=yegS;gbkey=Gene;gene=yegS;gene_biotype=protein_coding;locus_tag=PHA56_RS09040;old_locus_tag=PHA56_09040 NZ_CP116214.1 Protein Homology CDS 1890919 1891812 . - 0 ID=cds-WP_009654032.1;Parent=gene-PHA56_RS09040;Dbxref=Genbank:WP_009654032.1;Name=WP_009654032.1;Ontology_term=GO:0001727,GO:0046872;gbkey=CDS;gene=yegS;go_function=lipid kinase activity|0001727||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461084.1;locus_tag=PHA56_RS09040;product=lipid kinase YegS;protein_id=WP_009654032.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1892057 1893418 . - . ID=gene-PHA56_RS09045;Name=yegQ;gbkey=Gene;gene=yegQ;gene_biotype=protein_coding;locus_tag=PHA56_RS09045;old_locus_tag=PHA56_09045 NZ_CP116214.1 Protein Homology CDS 1892057 1893418 . - 0 ID=cds-WP_025107782.1;Parent=gene-PHA56_RS09045;Dbxref=Genbank:WP_025107782.1;Name=WP_025107782.1;gbkey=CDS;gene=yegQ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227892.1;locus_tag=PHA56_RS09045;product=tRNA 5-hydroxyuridine modification protein YegQ;protein_id=WP_025107782.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1893737 1894459 . - . ID=gene-PHA56_RS09050;Name=baeR;gbkey=Gene;gene=baeR;gene_biotype=protein_coding;locus_tag=PHA56_RS09050;old_locus_tag=PHA56_09050 NZ_CP116214.1 Protein Homology CDS 1893737 1894459 . - 0 ID=cds-WP_014230101.1;Parent=gene-PHA56_RS09050;Dbxref=Genbank:WP_014230101.1;Name=WP_014230101.1;Ontology_term=GO:0000160,GO:0003677;gbkey=CDS;gene=baeR;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227891.1;locus_tag=PHA56_RS09050;product=two-component system response regulator BaeR;protein_id=WP_014230101.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1894456 1895991 . - . ID=gene-PHA56_RS09055;Name=baeS;gbkey=Gene;gene=baeS;gene_biotype=protein_coding;locus_tag=PHA56_RS09055;old_locus_tag=PHA56_09055 NZ_CP116214.1 Protein Homology CDS 1894456 1895991 . - 0 ID=cds-WP_032693716.1;Parent=gene-PHA56_RS09055;Dbxref=Genbank:WP_032693716.1;Name=WP_032693716.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=baeS;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227890.1;locus_tag=PHA56_RS09055;product=two-component system sensor histidine kinase BaeS;protein_id=WP_032693716.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1895988 1897403 . - . ID=gene-PHA56_RS09060;Name=PHA56_RS09060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS09060;old_locus_tag=PHA56_09060 NZ_CP116214.1 Protein Homology CDS 1895988 1897403 . - 0 ID=cds-WP_014230099.1;Parent=gene-PHA56_RS09060;Dbxref=Genbank:WP_014230099.1;Name=WP_014230099.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227889.1;locus_tag=PHA56_RS09060;product=MFS transporter;protein_id=WP_014230099.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1897405 1900482 . - . ID=gene-PHA56_RS09065;Name=mdtC;gbkey=Gene;gene=mdtC;gene_biotype=protein_coding;locus_tag=PHA56_RS09065;old_locus_tag=PHA56_09065 NZ_CP116214.1 Protein Homology CDS 1897405 1900482 . - 0 ID=cds-WP_014230098.1;Parent=gene-PHA56_RS09065;Dbxref=Genbank:WP_014230098.1;Name=WP_014230098.1;Ontology_term=GO:0055085;gbkey=CDS;gene=mdtC;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227888.1;locus_tag=PHA56_RS09065;product=multidrug efflux RND transporter permease subunit MdtC;protein_id=WP_014230098.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1900483 1903605 . - . ID=gene-PHA56_RS09070;Name=PHA56_RS09070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS09070;old_locus_tag=PHA56_09070 NZ_CP116214.1 Protein Homology CDS 1900483 1903605 . - 0 ID=cds-WP_032750567.1;Parent=gene-PHA56_RS09070;Dbxref=Genbank:WP_032750567.1;Name=WP_032750567.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227887.1;locus_tag=PHA56_RS09070;product=MdtB/MuxB family multidrug efflux RND transporter permease subunit;protein_id=WP_032750567.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1903605 1904858 . - . ID=gene-PHA56_RS09075;Name=PHA56_RS09075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS09075;old_locus_tag=PHA56_09075 NZ_CP116214.1 Protein Homology CDS 1903605 1904858 . - 0 ID=cds-WP_014230096.1;Parent=gene-PHA56_RS09075;Dbxref=Genbank:WP_014230096.1;Name=WP_014230096.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227886.1;locus_tag=PHA56_RS09075;product=MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit;protein_id=WP_014230096.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1905242 1906003 . + . ID=gene-PHA56_RS09080;Name=PHA56_RS09080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS09080;old_locus_tag=PHA56_09080 NZ_CP116214.1 Protein Homology CDS 1905242 1906003 . + 0 ID=cds-WP_014230095.1;Parent=gene-PHA56_RS09080;Dbxref=Genbank:WP_014230095.1;Name=WP_014230095.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015583887.1;locus_tag=PHA56_RS09080;product=amidinotransferase;protein_id=WP_014230095.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1906032 1906805 . + . ID=gene-PHA56_RS09085;Name=PHA56_RS09085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS09085;old_locus_tag=PHA56_09085 NZ_CP116214.1 Protein Homology CDS 1906032 1906805 . + 0 ID=cds-WP_014838973.1;Parent=gene-PHA56_RS09085;Dbxref=Genbank:WP_014838973.1;Name=WP_014838973.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004852536.1;locus_tag=PHA56_RS09085;product=ABC transporter substrate-binding protein;protein_id=WP_014838973.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1906876 1907568 . + . ID=gene-PHA56_RS09090;Name=PHA56_RS09090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS09090;old_locus_tag=PHA56_09090 NZ_CP116214.1 Protein Homology CDS 1906876 1907568 . + 0 ID=cds-WP_014838972.1;Parent=gene-PHA56_RS09090;Dbxref=Genbank:WP_014838972.1;Name=WP_014838972.1;Note=The N-terminal region of this protein%2C as described by TIGR01726%2C is a three transmembrane segment that identifies a subfamily of ABC transporter permease subunits%2C which specificities that include histidine%2C arginine%2C glutamine%2C glutamate%2C L-cystine (sic)%2C the opines (in Agrobacterium) octopine and nopaline%2C etc.;Ontology_term=GO:0015837,GO:0005886,GO:0055052;gbkey=CDS;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_process=amine transport|0015837||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004113996.1;locus_tag=PHA56_RS09090;product=ABC transporter permease subunit;protein_id=WP_014838972.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1907565 1908290 . + . ID=gene-PHA56_RS09095;Name=PHA56_RS09095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS09095;old_locus_tag=PHA56_09095 NZ_CP116214.1 Protein Homology CDS 1907565 1908290 . + 0 ID=cds-WP_014230092.1;Parent=gene-PHA56_RS09095;Dbxref=Genbank:WP_014230092.1;Name=WP_014230092.1;Note=The N-terminal region of this protein%2C as described by TIGR01726%2C is a three transmembrane segment that identifies a subfamily of ABC transporter permease subunits%2C which specificities that include histidine%2C arginine%2C glutamine%2C glutamate%2C L-cystine (sic)%2C the opines (in Agrobacterium) octopine and nopaline%2C etc.;Ontology_term=GO:0015837,GO:0005886,GO:0055052;gbkey=CDS;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_process=amine transport|0015837||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004122607.1;locus_tag=PHA56_RS09095;product=ABC transporter permease subunit;protein_id=WP_014230092.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1908291 1908746 . - . ID=gene-PHA56_RS09100;Name=PHA56_RS09100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS09100;old_locus_tag=PHA56_09100 NZ_CP116214.1 Protein Homology CDS 1908291 1908746 . - 0 ID=cds-WP_025107779.1;Parent=gene-PHA56_RS09100;Dbxref=Genbank:WP_025107779.1;Name=WP_025107779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006318393.1;locus_tag=PHA56_RS09100;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_025107779.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1908761 1909879 . + . ID=gene-PHA56_RS09105;Name=PHA56_RS09105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS09105;old_locus_tag=PHA56_09105 NZ_CP116214.1 Protein Homology CDS 1908761 1909879 . + 0 ID=cds-WP_032750566.1;Parent=gene-PHA56_RS09105;Dbxref=Genbank:WP_032750566.1;Name=WP_032750566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004852529.1;locus_tag=PHA56_RS09105;product=M14 family metallopeptidase;protein_id=WP_032750566.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1909887 1910783 . - . ID=gene-PHA56_RS09110;Name=PHA56_RS09110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS09110;old_locus_tag=PHA56_09110 NZ_CP116214.1 Protein Homology CDS 1909887 1910783 . - 0 ID=cds-WP_032750563.1;Parent=gene-PHA56_RS09110;Dbxref=Genbank:WP_032750563.1;Name=WP_032750563.1;Ontology_term=GO:0006508,GO:0008233;gbkey=CDS;go_function=peptidase activity|0008233||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016946943.1;locus_tag=PHA56_RS09110;product=proline iminopeptidase-family hydrolase;protein_id=WP_032750563.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1910868 1911620 . - . ID=gene-PHA56_RS09115;Name=PHA56_RS09115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS09115;old_locus_tag=PHA56_09115 NZ_CP116214.1 Protein Homology CDS 1910868 1911620 . - 0 ID=cds-WP_014230088.1;Parent=gene-PHA56_RS09115;Dbxref=Genbank:WP_014230088.1;Name=WP_014230088.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016946944.1;locus_tag=PHA56_RS09115;product=LuxR family transcriptional regulator;protein_id=WP_014230088.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1911823 1912722 . + . ID=gene-PHA56_RS09120;Name=PHA56_RS09120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS09120;old_locus_tag=PHA56_09120 NZ_CP116214.1 Protein Homology CDS 1911823 1912722 . + 0 ID=cds-WP_016946945.1;Parent=gene-PHA56_RS09120;Dbxref=Genbank:WP_016946945.1;Name=WP_016946945.1;Ontology_term=GO:0006508,GO:0008233;gbkey=CDS;go_function=peptidase activity|0008233||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016946945.1;locus_tag=PHA56_RS09120;product=proline iminopeptidase-family hydrolase;protein_id=WP_016946945.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1912722 1913660 . + . ID=gene-PHA56_RS09125;Name=PHA56_RS09125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS09125;old_locus_tag=PHA56_09125 NZ_CP116214.1 Protein Homology CDS 1912722 1913660 . + 0 ID=cds-WP_032750562.1;Parent=gene-PHA56_RS09125;Dbxref=Genbank:WP_032750562.1;Name=WP_032750562.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004122588.1;locus_tag=PHA56_RS09125;product=ABC transporter permease;protein_id=WP_032750562.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1913657 1914502 . + . ID=gene-PHA56_RS09130;Name=PHA56_RS09130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS09130;old_locus_tag=PHA56_09130 NZ_CP116214.1 Protein Homology CDS 1913657 1914502 . + 0 ID=cds-WP_014838967.1;Parent=gene-PHA56_RS09130;Dbxref=Genbank:WP_014838967.1;Name=WP_014838967.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017455763.1;locus_tag=PHA56_RS09130;product=ABC transporter permease;protein_id=WP_014838967.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1914499 1915473 . + . ID=gene-PHA56_RS09135;Name=PHA56_RS09135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS09135;old_locus_tag=PHA56_09135 NZ_CP116214.1 Protein Homology CDS 1914499 1915473 . + 0 ID=cds-WP_032750561.1;Parent=gene-PHA56_RS09135;Dbxref=Genbank:WP_032750561.1;Name=WP_032750561.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009654004.1;locus_tag=PHA56_RS09135;product=ABC transporter ATP-binding protein;protein_id=WP_032750561.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1915473 1916507 . + . ID=gene-PHA56_RS09140;Name=PHA56_RS09140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS09140;old_locus_tag=PHA56_09140 NZ_CP116214.1 Protein Homology CDS 1915473 1916507 . + 0 ID=cds-WP_032693723.1;Parent=gene-PHA56_RS09140;Dbxref=Genbank:WP_032693723.1;Name=WP_032693723.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014230084.1;locus_tag=PHA56_RS09140;product=ABC transporter ATP-binding protein;protein_id=WP_032693723.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1916488 1918002 . + . ID=gene-PHA56_RS09145;Name=PHA56_RS09145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS09145;old_locus_tag=PHA56_09145 NZ_CP116214.1 Protein Homology CDS 1916488 1918002 . + 0 ID=cds-WP_014230083.1;Parent=gene-PHA56_RS09145;Dbxref=Genbank:WP_014230083.1;Name=WP_014230083.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016946947.1;locus_tag=PHA56_RS09145;product=ABC transporter substrate-binding protein;protein_id=WP_014230083.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1918279 1919511 . + . ID=gene-PHA56_RS09150;Name=PHA56_RS09150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS09150;old_locus_tag=PHA56_09150 NZ_CP116214.1 Protein Homology CDS 1918279 1919511 . + 0 ID=cds-WP_206044987.1;Parent=gene-PHA56_RS09150;Dbxref=Genbank:WP_206044987.1;Name=WP_206044987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004200440.1;locus_tag=PHA56_RS09150;product=dicarboxylate/amino acid:cation symporter;protein_id=WP_206044987.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1919808 1920425 . - . ID=gene-PHA56_RS09155;Name=PHA56_RS09155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS09155;old_locus_tag=PHA56_09155 NZ_CP116214.1 Protein Homology CDS 1919808 1920425 . - 0 ID=cds-WP_032751889.1;Parent=gene-PHA56_RS09155;Dbxref=Genbank:WP_032751889.1;Name=WP_032751889.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004151140.1;locus_tag=PHA56_RS09155;product=transcriptional regulator;protein_id=WP_032751889.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1920534 1920674 . - . ID=gene-PHA56_RS09160;Name=PHA56_RS09160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS09160;old_locus_tag=PHA56_09160 NZ_CP116214.1 Protein Homology CDS 1920534 1920674 . - 0 ID=cds-WP_032451537.1;Parent=gene-PHA56_RS09160;Dbxref=Genbank:WP_032451537.1;Name=WP_032451537.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004146563.1;locus_tag=PHA56_RS09160;product=small membrane protein;protein_id=WP_032451537.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1921041 1921739 . - . ID=gene-PHA56_RS09165;Name=PHA56_RS09165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS09165;old_locus_tag=PHA56_09165 NZ_CP116214.1 Protein Homology CDS 1921041 1921739 . - 0 ID=cds-WP_014230081.1;Parent=gene-PHA56_RS09165;Dbxref=Genbank:WP_014230081.1;Name=WP_014230081.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004151141.1;locus_tag=PHA56_RS09165;product=response regulator transcription factor;protein_id=WP_014230081.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1921736 1923697 . - . ID=gene-PHA56_RS09170;Name=PHA56_RS09170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS09170;old_locus_tag=PHA56_09170 NZ_CP116214.1 Protein Homology CDS 1921736 1923697 . - 0 ID=cds-WP_223226718.1;Parent=gene-PHA56_RS09170;Dbxref=Genbank:WP_223226718.1;Name=WP_223226718.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014838964.1;locus_tag=PHA56_RS09170;product=sensor histidine kinase;protein_id=WP_223226718.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1924539 1925822 . + . ID=gene-PHA56_RS09175;Name=PHA56_RS09175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS09175;old_locus_tag=PHA56_09175 NZ_CP116214.1 Protein Homology CDS 1924539 1925822 . + 0 ID=cds-WP_014230079.1;Parent=gene-PHA56_RS09175;Dbxref=Genbank:WP_014230079.1;Name=WP_014230079.1;Ontology_term=GO:0046912;gbkey=CDS;go_function=acyltransferase activity%2C acyl groups converted into alkyl on transfer|0046912||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014230079.1;locus_tag=PHA56_RS09175;product=citrate synthase;protein_id=WP_014230079.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1925913 1927265 . - . ID=gene-PHA56_RS09180;Name=yegD;gbkey=Gene;gene=yegD;gene_biotype=protein_coding;locus_tag=PHA56_RS09180;old_locus_tag=PHA56_09180 NZ_CP116214.1 Protein Homology CDS 1925913 1927265 . - 0 ID=cds-WP_014838962.1;Parent=gene-PHA56_RS09180;Dbxref=Genbank:WP_014838962.1;Name=WP_014838962.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;gene=yegD;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461070.1;locus_tag=PHA56_RS09180;product=molecular chaperone;protein_id=WP_014838962.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1927402 1928250 . + . ID=gene-PHA56_RS09185;Name=alkA;gbkey=Gene;gene=alkA;gene_biotype=protein_coding;locus_tag=PHA56_RS09185;old_locus_tag=PHA56_09185 NZ_CP116214.1 Protein Homology CDS 1927402 1928250 . + 0 ID=cds-WP_032750556.1;Parent=gene-PHA56_RS09185;Dbxref=Genbank:WP_032750556.1;Name=WP_032750556.1;Ontology_term=GO:0006281,GO:0003824;gbkey=CDS;gene=alkA;go_function=catalytic activity|0003824||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004233230.1;locus_tag=PHA56_RS09185;product=DNA-3-methyladenine glycosylase 2;protein_id=WP_032750556.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1928365 1929006 . + . ID=gene-PHA56_RS09190;Name=udk;gbkey=Gene;gene=udk;gene_biotype=protein_coding;locus_tag=PHA56_RS09190;old_locus_tag=PHA56_09190 NZ_CP116214.1 Protein Homology CDS 1928365 1929006 . + 0 ID=cds-WP_004122537.1;Parent=gene-PHA56_RS09190;Dbxref=Genbank:WP_004122537.1;Name=WP_004122537.1;Ontology_term=GO:0004849;gbkey=CDS;gene=udk;go_function=uridine kinase activity|0004849||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227878.1;locus_tag=PHA56_RS09190;product=uridine kinase;protein_id=WP_004122537.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1929097 1929678 . + . ID=gene-PHA56_RS09195;Name=dcd;gbkey=Gene;gene=dcd;gene_biotype=protein_coding;locus_tag=PHA56_RS09195;old_locus_tag=PHA56_09195 NZ_CP116214.1 Protein Homology CDS 1929097 1929678 . + 0 ID=cds-WP_004852489.1;Parent=gene-PHA56_RS09195;Dbxref=Genbank:WP_004852489.1;Name=WP_004852489.1;Ontology_term=GO:0009394,GO:0008829;gbkey=CDS;gene=dcd;go_function=dCTP deaminase activity|0008829||IEA;go_process=2'-deoxyribonucleotide metabolic process|0009394||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004942378.1;locus_tag=PHA56_RS09195;product=dCTP deaminase;protein_id=WP_004852489.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1929706 1931553 . + . ID=gene-PHA56_RS09200;Name=asmA;gbkey=Gene;gene=asmA;gene_biotype=protein_coding;locus_tag=PHA56_RS09200;old_locus_tag=PHA56_09200 NZ_CP116214.1 Protein Homology CDS 1929706 1931553 . + 0 ID=cds-WP_032750553.1;Parent=gene-PHA56_RS09200;Dbxref=Genbank:WP_032750553.1;Name=WP_032750553.1;gbkey=CDS;gene=asmA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002912440.1;locus_tag=PHA56_RS09200;product=outer membrane assembly protein AsmA;protein_id=WP_032750553.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1931793 1933379 . - . ID=gene-PHA56_RS09205;Name=PHA56_RS09205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS09205;old_locus_tag=PHA56_09205 NZ_CP116214.1 Protein Homology CDS 1931793 1933379 . - 0 ID=cds-WP_032750551.1;Parent=gene-PHA56_RS09205;Dbxref=Genbank:WP_032750551.1;Name=WP_032750551.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227875.1;locus_tag=PHA56_RS09205;product=TerC family protein;protein_id=WP_032750551.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1934356 1935252 . + . ID=gene-PHA56_RS09210;Name=galF;gbkey=Gene;gene=galF;gene_biotype=protein_coding;locus_tag=PHA56_RS09210;old_locus_tag=PHA56_09210 NZ_CP116214.1 Protein Homology CDS 1934356 1935252 . + 0 ID=cds-WP_032719844.1;Parent=gene-PHA56_RS09210;Dbxref=Genbank:WP_032719844.1;Name=WP_032719844.1;gbkey=CDS;gene=galF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020801621.1;locus_tag=PHA56_RS09210;product=UTP--glucose-1-phosphate uridylyltransferase GalF;protein_id=WP_032719844.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1935727 1936356 . + . ID=gene-PHA56_RS09215;Name=PHA56_RS09215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS09215;old_locus_tag=PHA56_09215 NZ_CP116214.1 Protein Homology CDS 1935727 1936356 . + 0 ID=cds-WP_014230072.1;Parent=gene-PHA56_RS09215;Dbxref=Genbank:WP_014230072.1;Name=WP_014230072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016946204.1;locus_tag=PHA56_RS09215;product=phosphatase PAP2 family protein;protein_id=WP_014230072.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1937358 1938797 . + . ID=gene-PHA56_RS09220;Name=PHA56_RS09220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS09220;old_locus_tag=PHA56_09220 NZ_CP116214.1 Protein Homology CDS 1937358 1938797 . + 0 ID=cds-WP_032750549.1;Parent=gene-PHA56_RS09220;Dbxref=Genbank:WP_032750549.1;Name=WP_032750549.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227870.1;locus_tag=PHA56_RS09220;product=capsule assembly Wzi family protein;protein_id=WP_032750549.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1938942 1940078 . + . ID=gene-PHA56_RS09225;Name=PHA56_RS09225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS09225;old_locus_tag=PHA56_09225 NZ_CP116214.1 Protein Homology CDS 1938942 1940078 . + 0 ID=cds-WP_032750547.1;Parent=gene-PHA56_RS09225;Dbxref=Genbank:WP_032750547.1;Name=WP_032750547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009484588.1;locus_tag=PHA56_RS09225;product=polysaccharide export protein;protein_id=WP_032750547.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1940080 1940517 . + . ID=gene-PHA56_RS09230;Name=PHA56_RS09230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS09230;old_locus_tag=PHA56_09230 NZ_CP116214.1 Protein Homology CDS 1940080 1940517 . + 0 ID=cds-WP_032750543.1;Parent=gene-PHA56_RS09230;Dbxref=Genbank:WP_032750543.1;Name=WP_032750543.1;Note=Wzb shows phosphatase activity towards the autophosphorylated Wzc protein%2C which induces colanic acid biosynthesis%3B catalyzes the phosphorylation of UDP-glucose dehydrogenase%2C an enzyme involved in colanic acid biosynthesis;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020078333.1;locus_tag=PHA56_RS09230;product=protein-tyrosine-phosphatase;protein_id=WP_032750543.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1940532 1942694 . + . ID=gene-PHA56_RS09235;Name=PHA56_RS09235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS09235;old_locus_tag=PHA56_09235 NZ_CP116214.1 Protein Homology CDS 1940532 1942694 . + 0 ID=cds-WP_032750540.1;Parent=gene-PHA56_RS09235;Dbxref=Genbank:WP_032750540.1;Name=WP_032750540.1;Ontology_term=GO:0045226;gbkey=CDS;go_process=extracellular polysaccharide biosynthetic process|0045226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016946207.1;locus_tag=PHA56_RS09235;product=polysaccharide biosynthesis tyrosine autokinase;protein_id=WP_032750540.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1942802 1944229 . + . ID=gene-PHA56_RS09240;Name=wbaP;gbkey=Gene;gene=wbaP;gene_biotype=protein_coding;locus_tag=PHA56_RS09240;old_locus_tag=PHA56_09240 NZ_CP116214.1 Protein Homology CDS 1942802 1944229 . + 0 ID=cds-WP_032750536.1;Parent=gene-PHA56_RS09240;Dbxref=Genbank:WP_032750536.1;Name=WP_032750536.1;Ontology_term=GO:0000271,GO:0016740,GO:0016020;gbkey=CDS;gene=wbaP;go_component=membrane|0016020||IEA;go_function=transferase activity|0016740||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014230067.1;locus_tag=PHA56_RS09240;product=undecaprenyl-phosphate galactose phosphotransferase WbaP;protein_id=WP_032750536.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1944290 1945378 . + . ID=gene-PHA56_RS09245;Name=PHA56_RS09245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS09245;old_locus_tag=PHA56_09245 NZ_CP116214.1 Protein Homology CDS 1944290 1945378 . + 0 ID=cds-WP_032750533.1;Parent=gene-PHA56_RS09245;Dbxref=Genbank:WP_032750533.1;Name=WP_032750533.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012744.2;locus_tag=PHA56_RS09245;product=glycosyltransferase;protein_id=WP_032750533.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1945420 1946550 . + . ID=gene-PHA56_RS09250;Name=PHA56_RS09250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS09250;old_locus_tag=PHA56_09250 NZ_CP116214.1 GeneMarkS-2+ CDS 1945420 1946550 . + 0 ID=cds-WP_271292966.1;Parent=gene-PHA56_RS09250;Dbxref=Genbank:WP_271292966.1;Name=WP_271292966.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PHA56_RS09250;product=hypothetical protein;protein_id=WP_271292966.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1946601 1947803 . + . ID=gene-PHA56_RS09255;Name=PHA56_RS09255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS09255;old_locus_tag=PHA56_09255 NZ_CP116214.1 Protein Homology CDS 1946601 1947803 . + 0 ID=cds-WP_162933629.1;Parent=gene-PHA56_RS09255;Dbxref=Genbank:WP_162933629.1;Name=WP_162933629.1;Ontology_term=GO:0005975,GO:0004650;gbkey=CDS;go_function=polygalacturonase activity|0004650||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: protein motif:HMM:NF012516.2;locus_tag=PHA56_RS09255;product=glycosyl hydrolase family 28 protein;protein_id=WP_162933629.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1947848 1948846 . + . ID=gene-PHA56_RS09260;Name=PHA56_RS09260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS09260;old_locus_tag=PHA56_09260 NZ_CP116214.1 Protein Homology CDS 1947848 1948846 . + 0 ID=cds-WP_223852505.1;Parent=gene-PHA56_RS09260;Dbxref=Genbank:WP_223852505.1;Name=WP_223852505.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002441837.1;locus_tag=PHA56_RS09260;product=glycosyltransferase family 1 protein;protein_id=WP_223852505.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1948901 1950055 . + . ID=gene-PHA56_RS09265;Name=PHA56_RS09265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS09265;old_locus_tag=PHA56_09265 NZ_CP116214.1 Protein Homology CDS 1948901 1950055 . + 0 ID=cds-WP_032750526.1;Parent=gene-PHA56_RS09265;Dbxref=Genbank:WP_032750526.1;Name=WP_032750526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015698538.1;locus_tag=PHA56_RS09265;product=glycosyltransferase family 4 protein;protein_id=WP_032750526.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1950075 1951070 . + . ID=gene-PHA56_RS09270;Name=PHA56_RS09270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS09270;old_locus_tag=PHA56_09270 NZ_CP116214.1 Protein Homology CDS 1950075 1951070 . + 0 ID=cds-WP_223226715.1;Parent=gene-PHA56_RS09270;Dbxref=Genbank:WP_223226715.1;Name=WP_223226715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020324276.1;locus_tag=PHA56_RS09270;product=hypothetical protein;protein_id=WP_223226715.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1951123 1952562 . + . ID=gene-PHA56_RS09275;Name=PHA56_RS09275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS09275;old_locus_tag=PHA56_09275 NZ_CP116214.1 Protein Homology CDS 1951123 1952562 . + 0 ID=cds-WP_032750523.1;Parent=gene-PHA56_RS09275;Dbxref=Genbank:WP_032750523.1;Name=WP_032750523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020324382.1;locus_tag=PHA56_RS09275;product=MOP flippase family protein;protein_id=WP_032750523.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1953811 1955217 . + . ID=gene-PHA56_RS09280;Name=gndA;gbkey=Gene;gene=gndA;gene_biotype=protein_coding;locus_tag=PHA56_RS09280;old_locus_tag=PHA56_09285 NZ_CP116214.1 Protein Homology CDS 1953811 1955217 . + 0 ID=cds-WP_032750517.1;Parent=gene-PHA56_RS09280;Dbxref=Genbank:WP_032750517.1;Name=WP_032750517.1;Ontology_term=GO:0006098,GO:0004616,GO:0050661;gbkey=CDS;gene=gndA;go_function=phosphogluconate dehydrogenase (decarboxylating) activity|0004616||IEA,NADP binding|0050661||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227859.1;locus_tag=PHA56_RS09280;product=NADP-dependent phosphogluconate dehydrogenase;protein_id=WP_032750517.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1955445 1956860 . + . ID=gene-PHA56_RS09285;Name=PHA56_RS09285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS09285;old_locus_tag=PHA56_09290 NZ_CP116214.1 Protein Homology CDS 1955445 1956860 . + 0 ID=cds-WP_032750515.1;Parent=gene-PHA56_RS09285;Dbxref=Genbank:WP_032750515.1;Name=WP_032750515.1;Ontology_term=GO:0009103,GO:0004476;gbkey=CDS;go_function=mannose-6-phosphate isomerase activity|0004476||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019725197.1;locus_tag=PHA56_RS09285;product=mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase;protein_id=WP_032750515.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1956883 1958253 . + . ID=gene-PHA56_RS09290;Name=cpsG;gbkey=Gene;gene=cpsG;gene_biotype=protein_coding;locus_tag=PHA56_RS09290;old_locus_tag=PHA56_09295 NZ_CP116214.1 Protein Homology CDS 1956883 1958253 . + 0 ID=cds-WP_032750513.1;Parent=gene-PHA56_RS09290;Dbxref=Genbank:WP_032750513.1;Name=WP_032750513.1;gbkey=CDS;gene=cpsG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032248255.1;locus_tag=PHA56_RS09290;product=phosphomannomutase CpsG;protein_id=WP_032750513.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1958416 1959582 . + . ID=gene-PHA56_RS09295;Name=ugd;gbkey=Gene;gene=ugd;gene_biotype=protein_coding;locus_tag=PHA56_RS09295;old_locus_tag=PHA56_09300 NZ_CP116214.1 Protein Homology CDS 1958416 1959582 . + 0 ID=cds-WP_014230056.1;Parent=gene-PHA56_RS09295;Dbxref=Genbank:WP_014230056.1;Name=WP_014230056.1;Ontology_term=GO:0000271,GO:0003979;gbkey=CDS;gene=ugd;go_function=UDP-glucose 6-dehydrogenase activity|0003979||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227854.1;locus_tag=PHA56_RS09295;product=UDP-glucose 6-dehydrogenase;protein_id=WP_014230056.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1960155 1960277 . - . ID=gene-PHA56_RS09300;Name=PHA56_RS09300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS09300;old_locus_tag=PHA56_09305 NZ_CP116214.1 Protein Homology CDS 1960155 1960277 . - 0 ID=cds-WP_004138729.1;Parent=gene-PHA56_RS09300;Dbxref=Genbank:WP_004138729.1;Name=WP_004138729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227853.1;locus_tag=PHA56_RS09300;product=small membrane protein;protein_id=WP_004138729.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1960750 1961754 . - . ID=gene-PHA56_RS09305;Name=PHA56_RS09305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS09305;old_locus_tag=PHA56_09310 NZ_CP116214.1 Protein Homology CDS 1960750 1961754 . - 0 ID=cds-WP_032750509.1;Parent=gene-PHA56_RS09305;Dbxref=Genbank:WP_032750509.1;Name=WP_032750509.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009654497.1;locus_tag=PHA56_RS09305;product=NAD-dependent epimerase;protein_id=WP_032750509.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1963060 1963827 . + . ID=gene-PHA56_RS09310;Name=PHA56_RS09310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS09310;old_locus_tag=PHA56_09315 NZ_CP116214.1 Protein Homology CDS 1963060 1963827 . + 0 ID=cds-WP_004138730.1;Parent=gene-PHA56_RS09310;Dbxref=Genbank:WP_004138730.1;Name=WP_004138730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227850.1;locus_tag=PHA56_RS09310;product=ABC transporter permease;protein_id=WP_004138730.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1963827 1964567 . + . ID=gene-PHA56_RS09315;Name=PHA56_RS09315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS09315;old_locus_tag=PHA56_09320 NZ_CP116214.1 Protein Homology CDS 1963827 1964567 . + 0 ID=cds-WP_004852439.1;Parent=gene-PHA56_RS09315;Dbxref=Genbank:WP_004852439.1;Name=WP_004852439.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227849.1;locus_tag=PHA56_RS09315;product=ABC transporter ATP-binding protein;protein_id=WP_004852439.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1964581 1966473 . + . ID=gene-PHA56_RS09320;Name=PHA56_RS09320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS09320;old_locus_tag=PHA56_09325 NZ_CP116214.1 Protein Homology CDS 1964581 1966473 . + 0 ID=cds-WP_032750507.1;Parent=gene-PHA56_RS09320;Dbxref=Genbank:WP_032750507.1;Name=WP_032750507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004852436.1;locus_tag=PHA56_RS09320;product=DUF4422 domain-containing protein;protein_id=WP_032750507.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1966492 1967646 . + . ID=gene-PHA56_RS09325;Name=glf;gbkey=Gene;gene=glf;gene_biotype=protein_coding;locus_tag=PHA56_RS09325;old_locus_tag=PHA56_09330 NZ_CP116214.1 Protein Homology CDS 1966492 1967646 . + 0 ID=cds-WP_004852435.1;Parent=gene-PHA56_RS09325;Dbxref=Genbank:WP_004852435.1;Name=WP_004852435.1;Ontology_term=GO:0009273,GO:0008767;gbkey=CDS;gene=glf;go_function=UDP-galactopyranose mutase activity|0008767||IEA;go_process=peptidoglycan-based cell wall biogenesis|0009273||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_023284018.1;locus_tag=PHA56_RS09325;product=UDP-galactopyranose mutase;protein_id=WP_004852435.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1967643 1968536 . + . ID=gene-PHA56_RS09330;Name=PHA56_RS09330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS09330;old_locus_tag=PHA56_09335 NZ_CP116214.1 Protein Homology CDS 1967643 1968536 . + 0 ID=cds-WP_032693856.1;Parent=gene-PHA56_RS09330;Dbxref=Genbank:WP_032693856.1;Name=WP_032693856.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014838937.1;locus_tag=PHA56_RS09330;product=glycosyltransferase;protein_id=WP_032693856.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1968537 1969682 . + . ID=gene-PHA56_RS09335;Name=PHA56_RS09335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS09335;old_locus_tag=PHA56_09340 NZ_CP116214.1 Protein Homology CDS 1968537 1969682 . + 0 ID=cds-WP_014838936.1;Parent=gene-PHA56_RS09335;Dbxref=Genbank:WP_014838936.1;Name=WP_014838936.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227845.1;locus_tag=PHA56_RS09335;product=glycosyltransferase family 4 protein;protein_id=WP_014838936.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1969814 1971133 . + . ID=gene-PHA56_RS09340;Name=PHA56_RS09340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS09340;old_locus_tag=PHA56_09345 NZ_CP116214.1 Protein Homology CDS 1969814 1971133 . + 0 ID=cds-WP_032750504.1;Parent=gene-PHA56_RS09340;Dbxref=Genbank:WP_032750504.1;Name=WP_032750504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014838935.1;locus_tag=PHA56_RS09340;product=glycosyltransferase family 2 protein;protein_id=WP_032750504.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1971217 1971816 . - . ID=gene-PHA56_RS09345;Name=hisIE;gbkey=Gene;gene=hisIE;gene_biotype=protein_coding;locus_tag=PHA56_RS09345;old_locus_tag=PHA56_09350 NZ_CP116214.1 Protein Homology CDS 1971217 1971816 . - 0 ID=cds-WP_004122447.1;Parent=gene-PHA56_RS09345;Dbxref=Genbank:WP_004122447.1;Name=WP_004122447.1;Ontology_term=GO:0000105,GO:0004635,GO:0004636;gbkey=CDS;gene=hisIE;go_function=phosphoribosyl-AMP cyclohydrolase activity|0004635||IEA,phosphoribosyl-ATP diphosphatase activity|0004636||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227843.1;locus_tag=PHA56_RS09345;product=bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE;protein_id=WP_004122447.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1971810 1972586 . - . ID=gene-PHA56_RS09350;Name=hisF;gbkey=Gene;gene=hisF;gene_biotype=protein_coding;locus_tag=PHA56_RS09350;old_locus_tag=PHA56_09355 NZ_CP116214.1 Protein Homology CDS 1971810 1972586 . - 0 ID=cds-WP_014230048.1;Parent=gene-PHA56_RS09350;Dbxref=Genbank:WP_014230048.1;Name=WP_014230048.1;Ontology_term=GO:0000105,GO:0000107;gbkey=CDS;gene=hisF;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227842.1;locus_tag=PHA56_RS09350;product=imidazole glycerol phosphate synthase subunit HisF;protein_id=WP_014230048.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1972568 1973305 . - . ID=gene-PHA56_RS09355;Name=hisA;gbkey=Gene;gene=hisA;gene_biotype=protein_coding;locus_tag=PHA56_RS09355;old_locus_tag=PHA56_09360 NZ_CP116214.1 Protein Homology CDS 1972568 1973305 . - 0 ID=cds-WP_014230047.1;Parent=gene-PHA56_RS09355;Dbxref=Genbank:WP_014230047.1;Name=WP_014230047.1;Ontology_term=GO:0000105,GO:0003949;gbkey=CDS;gene=hisA;go_function=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity|0003949||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227841.1;locus_tag=PHA56_RS09355;product=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase;protein_id=WP_014230047.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1973305 1973895 . - . ID=gene-PHA56_RS09360;Name=hisH;gbkey=Gene;gene=hisH;gene_biotype=protein_coding;locus_tag=PHA56_RS09360;old_locus_tag=PHA56_09365 NZ_CP116214.1 Protein Homology CDS 1973305 1973895 . - 0 ID=cds-WP_014230046.1;Parent=gene-PHA56_RS09360;Dbxref=Genbank:WP_014230046.1;Name=WP_014230046.1;Ontology_term=GO:0000105,GO:0000107,GO:0016884;gbkey=CDS;gene=hisH;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA,carbon-nitrogen ligase activity%2C with glutamine as amido-N-donor|0016884||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128083.1;locus_tag=PHA56_RS09360;product=imidazole glycerol phosphate synthase subunit HisH;protein_id=WP_014230046.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1973895 1974962 . - . ID=gene-PHA56_RS09365;Name=hisB;gbkey=Gene;gene=hisB;gene_biotype=protein_coding;locus_tag=PHA56_RS09365;old_locus_tag=PHA56_09370 NZ_CP116214.1 Protein Homology CDS 1973895 1974962 . - 0 ID=cds-WP_014230045.1;Parent=gene-PHA56_RS09365;Dbxref=Genbank:WP_014230045.1;Name=WP_014230045.1;Ontology_term=GO:0000105,GO:0004401,GO:0004424;gbkey=CDS;gene=hisB;go_function=histidinol-phosphatase activity|0004401||IEA,imidazoleglycerol-phosphate dehydratase activity|0004424||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227839.1;locus_tag=PHA56_RS09365;product=bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB;protein_id=WP_014230045.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1974959 1976020 . - . ID=gene-PHA56_RS09370;Name=hisC;gbkey=Gene;gene=hisC;gene_biotype=protein_coding;locus_tag=PHA56_RS09370;old_locus_tag=PHA56_09375 NZ_CP116214.1 Protein Homology CDS 1974959 1976020 . - 0 ID=cds-WP_014230044.1;Parent=gene-PHA56_RS09370;Dbxref=Genbank:WP_014230044.1;Name=WP_014230044.1;Ontology_term=GO:0000105,GO:0004400;gbkey=CDS;gene=hisC;go_function=histidinol-phosphate transaminase activity|0004400||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227838.1;locus_tag=PHA56_RS09370;product=histidinol-phosphate transaminase;protein_id=WP_014230044.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1976017 1977321 . - . ID=gene-PHA56_RS09375;Name=hisD;gbkey=Gene;gene=hisD;gene_biotype=protein_coding;locus_tag=PHA56_RS09375;old_locus_tag=PHA56_09380 NZ_CP116214.1 Protein Homology CDS 1976017 1977321 . - 0 ID=cds-WP_032719822.1;Parent=gene-PHA56_RS09375;Dbxref=Genbank:WP_032719822.1;Name=WP_032719822.1;Ontology_term=GO:0000105,GO:0004399;gbkey=CDS;gene=hisD;go_function=histidinol dehydrogenase activity|0004399||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227837.1;locus_tag=PHA56_RS09375;product=histidinol dehydrogenase;protein_id=WP_032719822.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1977361 1978260 . - . ID=gene-PHA56_RS09380;Name=hisG;gbkey=Gene;gene=hisG;gene_biotype=protein_coding;locus_tag=PHA56_RS09380;old_locus_tag=PHA56_09385 NZ_CP116214.1 Protein Homology CDS 1977361 1978260 . - 0 ID=cds-WP_032750503.1;Parent=gene-PHA56_RS09380;Dbxref=Genbank:WP_032750503.1;Name=WP_032750503.1;Ontology_term=GO:0000105,GO:0003879;gbkey=CDS;gene=hisG;go_function=ATP phosphoribosyltransferase activity|0003879||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128078.1;locus_tag=PHA56_RS09380;product=ATP phosphoribosyltransferase;protein_id=WP_032750503.1;transl_table=11 NZ_CP116214.1 cmsearch sequence_feature 1978308 1978430 . - . ID=id-NZ_CP116214.1:1978308..1978430;Dbxref=RFAM:RF00514;Note=His leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.1 NZ_CP116214.1 RefSeq gene 1978406 1978456 . - . ID=gene-PHA56_RS09385;Name=hisL;gbkey=Gene;gene=hisL;gene_biotype=protein_coding;locus_tag=PHA56_RS09385;old_locus_tag=PHA56_09390 NZ_CP116214.1 Protein Homology CDS 1978406 1978456 . - 0 ID=cds-WP_009654477.1;Parent=gene-PHA56_RS09385;Dbxref=Genbank:WP_009654477.1;Name=WP_009654477.1;Ontology_term=GO:0000105;gbkey=CDS;gene=hisL;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310846.1;locus_tag=PHA56_RS09385;product=his operon leader peptide;protein_id=WP_009654477.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1978632 1979456 . + . ID=gene-PHA56_RS09390;Name=PHA56_RS09390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS09390;old_locus_tag=PHA56_09395 NZ_CP116214.1 Protein Homology CDS 1978632 1979456 . + 0 ID=cds-WP_004852412.1;Parent=gene-PHA56_RS09390;Dbxref=Genbank:WP_004852412.1;Name=WP_004852412.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227835.1;locus_tag=PHA56_RS09390;product=SDR family oxidoreductase;protein_id=WP_004852412.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1979495 1980385 . + . ID=gene-PHA56_RS09395;Name=PHA56_RS09395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS09395;old_locus_tag=PHA56_09400 NZ_CP116214.1 Protein Homology CDS 1979495 1980385 . + 0 ID=cds-WP_032750502.1;Parent=gene-PHA56_RS09395;Dbxref=Genbank:WP_032750502.1;Name=WP_032750502.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020801537.1;locus_tag=PHA56_RS09395;product=LysR substrate-binding domain-containing protein;protein_id=WP_032750502.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1980673 1982031 . + . ID=gene-PHA56_RS09400;Name=PHA56_RS09400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS09400;old_locus_tag=PHA56_09405 NZ_CP116214.1 Protein Homology CDS 1980673 1982031 . + 0 ID=cds-WP_004103635.1;Parent=gene-PHA56_RS09400;Dbxref=Genbank:WP_004103635.1;Name=WP_004103635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227833.1;locus_tag=PHA56_RS09400;product=APC family permease;protein_id=WP_004103635.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1982121 1982624 . - . ID=gene-PHA56_RS09405;Name=PHA56_RS09405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS09405;old_locus_tag=PHA56_09410 NZ_CP116214.1 Protein Homology CDS 1982121 1982624 . - 0 ID=cds-WP_014230039.1;Parent=gene-PHA56_RS09405;Dbxref=Genbank:WP_014230039.1;Name=WP_014230039.1;Ontology_term=GO:0009399,GO:0030151;gbkey=CDS;go_function=molybdenum ion binding|0030151||IEA;go_process=nitrogen fixation|0009399||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004122425.1;locus_tag=PHA56_RS09405;product=nitrogen fixation protein NifQ;protein_id=WP_014230039.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1982624 1984030 . - . ID=gene-PHA56_RS09410;Name=nifB;gbkey=Gene;gene=nifB;gene_biotype=protein_coding;locus_tag=PHA56_RS09410;old_locus_tag=PHA56_09415 NZ_CP116214.1 Protein Homology CDS 1982624 1984030 . - 0 ID=cds-WP_014230038.1;Parent=gene-PHA56_RS09410;Dbxref=Genbank:WP_014230038.1;Name=WP_014230038.1;Ontology_term=GO:0009399,GO:0051539,GO:1904047;gbkey=CDS;gene=nifB;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=nitrogen fixation|0009399||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009654469.1;locus_tag=PHA56_RS09410;product=nitrogenase cofactor biosynthesis protein NifB;protein_id=WP_014230038.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1984195 1985769 . - . ID=gene-PHA56_RS09415;Name=nifA;gbkey=Gene;gene=nifA;gene_biotype=protein_coding;locus_tag=PHA56_RS09415;old_locus_tag=PHA56_09420 NZ_CP116214.1 Protein Homology CDS 1984195 1985769 . - 0 ID=cds-WP_032693850.1;Parent=gene-PHA56_RS09415;Dbxref=Genbank:WP_032693850.1;Name=WP_032693850.1;Ontology_term=GO:0006355,GO:0009399,GO:0003700;gbkey=CDS;gene=nifA;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,nitrogen fixation|0009399||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009654466.1;locus_tag=PHA56_RS09415;product=nif-specific transcriptional activator NifA;protein_id=WP_032693850.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1985766 1987253 . - . ID=gene-PHA56_RS09420;Name=nifL;gbkey=Gene;gene=nifL;gene_biotype=protein_coding;locus_tag=PHA56_RS09420;old_locus_tag=PHA56_09425 NZ_CP116214.1 Protein Homology CDS 1985766 1987253 . - 0 ID=cds-WP_032750501.1;Parent=gene-PHA56_RS09420;Dbxref=Genbank:WP_032750501.1;Name=WP_032750501.1;gbkey=CDS;gene=nifL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004122419.1;locus_tag=PHA56_RS09420;product=nitrogen fixation negative regulator NifL;protein_id=WP_032750501.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1987574 1988104 . + . ID=gene-PHA56_RS09425;Name=PHA56_RS09425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS09425;old_locus_tag=PHA56_09430 NZ_CP116214.1 Protein Homology CDS 1987574 1988104 . + 0 ID=cds-WP_014838926.1;Parent=gene-PHA56_RS09425;Dbxref=Genbank:WP_014838926.1;Name=WP_014838926.1;Ontology_term=GO:0009055;gbkey=CDS;go_function=electron transfer activity|0009055||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004203572.1;locus_tag=PHA56_RS09425;product=flavodoxin;protein_id=WP_014838926.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1988127 1988927 . - . ID=gene-PHA56_RS09430;Name=nifM;gbkey=Gene;gene=nifM;gene_biotype=protein_coding;locus_tag=PHA56_RS09430;old_locus_tag=PHA56_09435 NZ_CP116214.1 Protein Homology CDS 1988127 1988927 . - 0 ID=cds-WP_119834337.1;Parent=gene-PHA56_RS09430;Dbxref=Genbank:WP_119834337.1;Name=WP_119834337.1;gbkey=CDS;gene=nifM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014838925.1;locus_tag=PHA56_RS09430;product=nitrogen fixation protein NifM;protein_id=WP_119834337.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1988924 1989370 . - . ID=gene-PHA56_RS09435;Name=PHA56_RS09435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS09435;old_locus_tag=PHA56_09440 NZ_CP116214.1 Protein Homology CDS 1988924 1989370 . - 0 ID=cds-WP_032750499.1;Parent=gene-PHA56_RS09435;Dbxref=Genbank:WP_032750499.1;Name=WP_032750499.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004138777.1;locus_tag=PHA56_RS09435;product=nitrogen fixation protein NifZ;protein_id=WP_032750499.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1989367 1989627 . - . ID=gene-PHA56_RS09440;Name=PHA56_RS09440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS09440;old_locus_tag=PHA56_09445 NZ_CP116214.1 Protein Homology CDS 1989367 1989627 . - 0 ID=cds-WP_032719814.1;Parent=gene-PHA56_RS09440;Dbxref=Genbank:WP_032719814.1;Name=WP_032719814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004122407.1;locus_tag=PHA56_RS09440;product=nitrogenase-stabilizing/protective protein NifW;protein_id=WP_032719814.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1989627 1990769 . - . ID=gene-PHA56_RS09445;Name=nifV;gbkey=Gene;gene=nifV;gene_biotype=protein_coding;locus_tag=PHA56_RS09445;old_locus_tag=PHA56_09450 NZ_CP116214.1 Protein Homology CDS 1989627 1990769 . - 0 ID=cds-WP_032719813.1;Parent=gene-PHA56_RS09445;Dbxref=Genbank:WP_032719813.1;Name=WP_032719813.1;Ontology_term=GO:0004410;gbkey=CDS;gene=nifV;go_function=homocitrate synthase activity|0004410||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004852400.1;locus_tag=PHA56_RS09445;product=homocitrate synthase;protein_id=WP_032719813.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1990784 1991986 . - . ID=gene-PHA56_RS09450;Name=nifS;gbkey=Gene;gene=nifS;gene_biotype=protein_coding;locus_tag=PHA56_RS09450;old_locus_tag=PHA56_09455 NZ_CP116214.1 Protein Homology CDS 1990784 1991986 . - 0 ID=cds-WP_032750498.1;Parent=gene-PHA56_RS09450;Dbxref=Genbank:WP_032750498.1;Name=WP_032750498.1;Ontology_term=GO:0006520,GO:0031071;gbkey=CDS;gene=nifS;go_function=cysteine desulfurase activity|0031071||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004122403.1;locus_tag=PHA56_RS09450;product=cysteine desulfurase NifS;protein_id=WP_032750498.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1992017 1992841 . - . ID=gene-PHA56_RS09455;Name=nifU;gbkey=Gene;gene=nifU;gene_biotype=protein_coding;locus_tag=PHA56_RS09455;old_locus_tag=PHA56_09460 NZ_CP116214.1 Protein Homology CDS 1992017 1992841 . - 0 ID=cds-WP_014230029.1;Parent=gene-PHA56_RS09455;Dbxref=Genbank:WP_014230029.1;Name=WP_014230029.1;Ontology_term=GO:0009399,GO:0016226,GO:0005198;gbkey=CDS;gene=nifU;go_function=structural molecule activity|0005198||IEA;go_process=nitrogen fixation|0009399||IEA,iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017456743.1;locus_tag=PHA56_RS09455;product=Fe-S cluster assembly protein NifU;protein_id=WP_014230029.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1993036 1993506 . - . ID=gene-PHA56_RS09460;Name=PHA56_RS09460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS09460;old_locus_tag=PHA56_09465 NZ_CP116214.1 Protein Homology CDS 1993036 1993506 . - 0 ID=cds-WP_032750497.1;Parent=gene-PHA56_RS09460;Dbxref=Genbank:WP_032750497.1;Name=WP_032750497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004122400.1;locus_tag=PHA56_RS09460;product=NifB/NifX family molybdenum-iron cluster-binding protein;protein_id=WP_032750497.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1993493 1994878 . - . ID=gene-PHA56_RS09465;Name=nifN;gbkey=Gene;gene=nifN;gene_biotype=protein_coding;locus_tag=PHA56_RS09465;old_locus_tag=PHA56_09470 NZ_CP116214.1 Protein Homology CDS 1993493 1994878 . - 0 ID=cds-WP_032750494.1;Parent=gene-PHA56_RS09465;Dbxref=Genbank:WP_032750494.1;Name=WP_032750494.1;Ontology_term=GO:0009399,GO:0005488;gbkey=CDS;gene=nifN;go_function=binding|0005488||IEA;go_process=nitrogen fixation|0009399||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004122397.1;locus_tag=PHA56_RS09465;product=nitrogenase iron-molybdenum cofactor biosynthesis protein NifN;protein_id=WP_032750494.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1994889 1996262 . - . ID=gene-PHA56_RS09470;Name=nifE;gbkey=Gene;gene=nifE;gene_biotype=protein_coding;locus_tag=PHA56_RS09470;old_locus_tag=PHA56_09475 NZ_CP116214.1 Protein Homology CDS 1994889 1996262 . - 0 ID=cds-WP_032750492.1;Parent=gene-PHA56_RS09470;Dbxref=Genbank:WP_032750492.1;Name=WP_032750492.1;Ontology_term=GO:0009399,GO:0005488;gbkey=CDS;gene=nifE;go_function=binding|0005488||IEA;go_process=nitrogen fixation|0009399||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014838917.1;locus_tag=PHA56_RS09470;product=nitrogenase iron-molybdenum cofactor biosynthesis protein NifE;protein_id=WP_032750492.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1996600 1997262 . - . ID=gene-PHA56_RS09475;Name=PHA56_RS09475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS09475;old_locus_tag=PHA56_09480 NZ_CP116214.1 Protein Homology CDS 1996600 1997262 . - 0 ID=cds-WP_032750491.1;Parent=gene-PHA56_RS09475;Dbxref=Genbank:WP_032750491.1;Name=WP_032750491.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012541111.1;locus_tag=PHA56_RS09475;product=NifB/NifX family molybdenum-iron cluster-binding protein;protein_id=WP_032750491.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1997273 1997491 . - . ID=gene-PHA56_RS09480;Name=nifT;gbkey=Gene;gene=nifT;gene_biotype=protein_coding;locus_tag=PHA56_RS09480;old_locus_tag=PHA56_09485 NZ_CP116214.1 Protein Homology CDS 1997273 1997491 . - 0 ID=cds-WP_014230024.1;Parent=gene-PHA56_RS09480;Dbxref=Genbank:WP_014230024.1;Name=WP_014230024.1;Ontology_term=GO:0009399;gbkey=CDS;gene=nifT;go_process=nitrogen fixation|0009399||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004122392.1;locus_tag=PHA56_RS09480;product=putative nitrogen fixation protein NifT;protein_id=WP_014230024.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1997531 1999093 . - . ID=gene-PHA56_RS09485;Name=nifK;gbkey=Gene;gene=nifK;gene_biotype=protein_coding;locus_tag=PHA56_RS09485;old_locus_tag=PHA56_09490 NZ_CP116214.1 Protein Homology CDS 1997531 1999093 . - 0 ID=cds-WP_119834338.1;Parent=gene-PHA56_RS09485;Dbxref=Genbank:WP_119834338.1;Name=WP_119834338.1;Ontology_term=GO:0009399,GO:0016163,GO:0016612;gbkey=CDS;gene=nifK;go_component=molybdenum-iron nitrogenase complex|0016612||IEA;go_function=nitrogenase activity|0016163||IEA;go_process=nitrogen fixation|0009399||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016161448.1;locus_tag=PHA56_RS09485;product=nitrogenase molybdenum-iron protein subunit beta;protein_id=WP_119834338.1;transl_table=11 NZ_CP116214.1 RefSeq gene 1999149 2000597 . - . ID=gene-PHA56_RS09490;Name=nifD;gbkey=Gene;gene=nifD;gene_biotype=protein_coding;locus_tag=PHA56_RS09490;old_locus_tag=PHA56_09495 NZ_CP116214.1 Protein Homology CDS 1999149 2000597 . - 0 ID=cds-WP_014230022.1;Parent=gene-PHA56_RS09490;Dbxref=Genbank:WP_014230022.1;Name=WP_014230022.1;Ontology_term=GO:0009399,GO:0016163,GO:0016612;gbkey=CDS;gene=nifD;go_component=molybdenum-iron nitrogenase complex|0016612||IEA;go_function=nitrogenase activity|0016163||IEA;go_process=nitrogen fixation|0009399||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004138788.1;locus_tag=PHA56_RS09490;product=nitrogenase molybdenum-iron protein alpha chain;protein_id=WP_014230022.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2000614 2001495 . - . ID=gene-PHA56_RS09495;Name=nifH;gbkey=Gene;gene=nifH;gene_biotype=protein_coding;locus_tag=PHA56_RS09495;old_locus_tag=PHA56_09500 NZ_CP116214.1 Protein Homology CDS 2000614 2001495 . - 0 ID=cds-WP_004852391.1;Parent=gene-PHA56_RS09495;Dbxref=Genbank:WP_004852391.1;Name=WP_004852391.1;Ontology_term=GO:0009399,GO:0016163,GO:0016611,GO:0016612,GO:0016613;gbkey=CDS;gene=nifH;go_component=iron-iron nitrogenase complex|0016611||IEA,molybdenum-iron nitrogenase complex|0016612||IEA,vanadium-iron nitrogenase complex|0016613||IEA;go_function=nitrogenase activity|0016163||IEA;go_process=nitrogen fixation|0009399||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004122384.1;locus_tag=PHA56_RS09495;product=nitrogenase iron protein;protein_id=WP_004852391.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2001900 2005415 . + . ID=gene-PHA56_RS09500;Name=nifJ;gbkey=Gene;gene=nifJ;gene_biotype=protein_coding;locus_tag=PHA56_RS09500;old_locus_tag=PHA56_09505 NZ_CP116214.1 Protein Homology CDS 2001900 2005415 . + 0 ID=cds-WP_032750490.1;Parent=gene-PHA56_RS09500;Dbxref=Genbank:WP_032750490.1;Name=WP_032750490.1;Ontology_term=GO:0022900,GO:0005506,GO:0016903,GO:0030976;gbkey=CDS;gene=nifJ;go_function=iron ion binding|0005506||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors|0016903||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012967616.1;locus_tag=PHA56_RS09500;product=pyruvate:ferredoxin (flavodoxin) oxidoreductase;protein_id=WP_032750490.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2005434 2005745 . - . ID=gene-PHA56_RS09505;Name=PHA56_RS09505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS09505;old_locus_tag=PHA56_09510 NZ_CP116214.1 Protein Homology CDS 2005434 2005745 . - 0 ID=cds-WP_014838913.1;Parent=gene-PHA56_RS09505;Dbxref=Genbank:WP_014838913.1;Name=WP_014838913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009654494.1;locus_tag=PHA56_RS09505;product=helix-turn-helix domain-containing protein;protein_id=WP_014838913.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2005984 2008086 . + . ID=gene-PHA56_RS09510;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=PHA56_RS09510;old_locus_tag=PHA56_09515 NZ_CP116214.1 Protein Homology CDS 2005984 2008086 . + 0 ID=cds-WP_038424699.1;Parent=gene-PHA56_RS09510;Dbxref=Genbank:WP_038424699.1;Name=WP_038424699.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=fusA;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004103632.1;locus_tag=PHA56_RS09510;product=elongation factor G;protein_id=WP_038424699.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2008192 2009616 . - . ID=gene-PHA56_RS09515;Name=sbcB;gbkey=Gene;gene=sbcB;gene_biotype=protein_coding;locus_tag=PHA56_RS09515;old_locus_tag=PHA56_09520 NZ_CP116214.1 Protein Homology CDS 2008192 2009616 . - 0 ID=cds-WP_119834339.1;Parent=gene-PHA56_RS09515;Dbxref=Genbank:WP_119834339.1;Name=WP_119834339.1;Ontology_term=GO:0006281,GO:0000175,GO:0003676,GO:0008852;gbkey=CDS;gene=sbcB;go_function=3'-5'-exoribonuclease activity|0000175||IEA,nucleic acid binding|0003676||IEA,exodeoxyribonuclease I activity|0008852||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227830.1;locus_tag=PHA56_RS09515;product=exodeoxyribonuclease I;protein_id=WP_119834339.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2009797 2010963 . + . ID=gene-PHA56_RS09520;Name=dacD;gbkey=Gene;gene=dacD;gene_biotype=protein_coding;locus_tag=PHA56_RS09520;old_locus_tag=PHA56_09525 NZ_CP116214.1 Protein Homology CDS 2009797 2010963 . + 0 ID=cds-WP_014230017.1;Parent=gene-PHA56_RS09520;Dbxref=Genbank:WP_014230017.1;Name=WP_014230017.1;Ontology_term=GO:0006508,GO:0009002;gbkey=CDS;gene=dacD;go_function=serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004153104.1;locus_tag=PHA56_RS09520;product=serine-type D-Ala-D-Ala carboxypeptidase DacD;protein_id=WP_014230017.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2011117 2012553 . + . ID=gene-PHA56_RS09525;Name=PHA56_RS09525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS09525;old_locus_tag=PHA56_09530 NZ_CP116214.1 Protein Homology CDS 2011117 2012553 . + 0 ID=cds-WP_032750481.1;Parent=gene-PHA56_RS09525;Dbxref=Genbank:WP_032750481.1;Name=WP_032750481.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227870.1;locus_tag=PHA56_RS09525;product=capsule assembly Wzi family protein;protein_id=WP_032750481.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2012680 2013153 . + . ID=gene-PHA56_RS09530;Name=sbmC;gbkey=Gene;gene=sbmC;gene_biotype=protein_coding;locus_tag=PHA56_RS09530;old_locus_tag=PHA56_09535 NZ_CP116214.1 Protein Homology CDS 2012680 2013153 . + 0 ID=cds-WP_032750479.1;Parent=gene-PHA56_RS09530;Dbxref=Genbank:WP_032750479.1;Name=WP_032750479.1;gbkey=CDS;gene=sbmC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004113909.1;locus_tag=PHA56_RS09530;product=DNA gyrase inhibitor SbmC;protein_id=WP_032750479.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2013252 2014310 . + . ID=gene-PHA56_RS09535;Name=PHA56_RS09535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS09535;old_locus_tag=PHA56_09540 NZ_CP116214.1 Protein Homology CDS 2013252 2014310 . + 0 ID=cds-WP_004103626.1;Parent=gene-PHA56_RS09535;Dbxref=Genbank:WP_004103626.1;Name=WP_004103626.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227826.1;locus_tag=PHA56_RS09535;product=FUSC family protein;protein_id=WP_004103626.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2014479 2014814 . + . ID=gene-PHA56_RS09540;Name=PHA56_RS09540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS09540;old_locus_tag=PHA56_09545 NZ_CP116214.1 Protein Homology CDS 2014479 2014814 . + 0 ID=cds-WP_004103624.1;Parent=gene-PHA56_RS09540;Dbxref=Genbank:WP_004103624.1;Name=WP_004103624.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004103624.1;locus_tag=PHA56_RS09540;product=DUF496 family protein;protein_id=WP_004103624.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2015008 2015220 . + . ID=gene-PHA56_RS09545;Name=PHA56_RS09545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS09545;old_locus_tag=PHA56_09550 NZ_CP116214.1 Protein Homology CDS 2015008 2015220 . + 0 ID=cds-WP_050597582.1;Parent=gene-PHA56_RS09545;Dbxref=Genbank:WP_050597582.1;Name=WP_050597582.1;Ontology_term=GO:0009236,GO:0000166,GO:0043752;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,adenosylcobinamide kinase activity|0043752||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009652800.1;locus_tag=PHA56_RS09545;product=bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase;protein_id=WP_050597582.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2015291 2016031 . + . ID=gene-PHA56_RS09550;Name=cobS;gbkey=Gene;gene=cobS;gene_biotype=protein_coding;locus_tag=PHA56_RS09550;old_locus_tag=PHA56_09555 NZ_CP116214.1 Protein Homology CDS 2015291 2016031 . + 0 ID=cds-WP_014838908.1;Parent=gene-PHA56_RS09550;Dbxref=Genbank:WP_014838908.1;Name=WP_014838908.1;Ontology_term=GO:0009236,GO:0008818;gbkey=CDS;gene=cobS;go_function=cobalamin 5'-phosphate synthase activity|0008818||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227824.1;locus_tag=PHA56_RS09550;product=adenosylcobinamide-GDP ribazoletransferase;protein_id=WP_014838908.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2016519 2017628 . - . ID=gene-PHA56_RS09555;Name=PHA56_RS09555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS09555;old_locus_tag=PHA56_09560 NZ_CP116214.1 Protein Homology CDS 2016519 2017628 . - 0 ID=cds-WP_032720290.1;Parent=gene-PHA56_RS09555;Dbxref=Genbank:WP_032720290.1;Name=WP_032720290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227822.1;locus_tag=PHA56_RS09555;product=adenosylhomocysteinase;protein_id=WP_032720290.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2017814 2018545 . + . ID=gene-PHA56_RS09560;Name=PHA56_RS09560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS09560;old_locus_tag=PHA56_09565 NZ_CP116214.1 Protein Homology CDS 2017814 2018545 . + 0 ID=cds-WP_014838906.1;Parent=gene-PHA56_RS09560;Dbxref=Genbank:WP_014838906.1;Name=WP_014838906.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009652804.1;locus_tag=PHA56_RS09560;product=HPP family protein;protein_id=WP_014838906.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2018926 2020350 . + . ID=gene-PHA56_RS09565;Name=PHA56_RS09565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS09565;old_locus_tag=PHA56_09570 NZ_CP116214.1 Protein Homology CDS 2018926 2020350 . + 0 ID=cds-WP_048252433.1;Parent=gene-PHA56_RS09565;Dbxref=Genbank:WP_048252433.1;Name=WP_048252433.1;Ontology_term=GO:0008643,GO:0051119,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=sugar transmembrane transporter activity|0051119||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014230010.1;locus_tag=PHA56_RS09565;product=sugar porter family MFS transporter;protein_id=WP_048252433.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2020372 2021382 . + . ID=gene-PHA56_RS09570;Name=PHA56_RS09570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS09570;old_locus_tag=PHA56_09575 NZ_CP116214.1 Protein Homology CDS 2020372 2021382 . + 0 ID=cds-WP_032750476.1;Parent=gene-PHA56_RS09570;Dbxref=Genbank:WP_032750476.1;Name=WP_032750476.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004103612.1;locus_tag=PHA56_RS09570;product=Gfo/Idh/MocA family oxidoreductase;protein_id=WP_032750476.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2021406 2021855 . + . ID=gene-PHA56_RS09575;Name=PHA56_RS09575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS09575;old_locus_tag=PHA56_09580 NZ_CP116214.1 Protein Homology CDS 2021406 2021855 . + 0 ID=cds-WP_032750473.1;Parent=gene-PHA56_RS09575;Dbxref=Genbank:WP_032750473.1;Name=WP_032750473.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014230008.1;locus_tag=PHA56_RS09575;product=PTS sugar transporter subunit IIA;protein_id=WP_032750473.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2021852 2022793 . + . ID=gene-PHA56_RS09580;Name=PHA56_RS09580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS09580;old_locus_tag=PHA56_09585 NZ_CP116214.1 Protein Homology CDS 2021852 2022793 . + 0 ID=cds-WP_032750469.1;Parent=gene-PHA56_RS09580;Dbxref=Genbank:WP_032750469.1;Name=WP_032750469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016809176.1;locus_tag=PHA56_RS09580;product=sugar phosphate isomerase/epimerase;protein_id=WP_032750469.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2022917 2023921 . + . ID=gene-PHA56_RS09585;Name=PHA56_RS09585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS09585;old_locus_tag=PHA56_09590 NZ_CP116214.1 Protein Homology CDS 2022917 2023921 . + 0 ID=cds-WP_032693836.1;Parent=gene-PHA56_RS09585;Dbxref=Genbank:WP_032693836.1;Name=WP_032693836.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016809175.1;locus_tag=PHA56_RS09585;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_032693836.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2023918 2024307 . - . ID=gene-PHA56_RS09590;Name=PHA56_RS09590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS09590;old_locus_tag=PHA56_09595 NZ_CP116214.1 Protein Homology CDS 2023918 2024307 . - 0 ID=cds-WP_038424698.1;Parent=gene-PHA56_RS09590;Dbxref=Genbank:WP_038424698.1;Name=WP_038424698.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227820.1;locus_tag=PHA56_RS09590;product=tautomerase family protein;protein_id=WP_038424698.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2024420 2025337 . + . ID=gene-PHA56_RS09595;Name=PHA56_RS09595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS09595;old_locus_tag=PHA56_09600 NZ_CP116214.1 Protein Homology CDS 2024420 2025337 . + 0 ID=cds-WP_004852363.1;Parent=gene-PHA56_RS09595;Dbxref=Genbank:WP_004852363.1;Name=WP_004852363.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004122339.1;locus_tag=PHA56_RS09595;product=LysR family transcriptional regulator;protein_id=WP_004852363.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2025330 2026061 . - . ID=gene-PHA56_RS09600;Name=PHA56_RS09600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS09600;old_locus_tag=PHA56_09605 NZ_CP116214.1 Protein Homology CDS 2025330 2026061 . - 0 ID=cds-WP_032750466.1;Parent=gene-PHA56_RS09600;Dbxref=Genbank:WP_032750466.1;Name=WP_032750466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004103604.1;locus_tag=PHA56_RS09600;product=lipoate--protein ligase A;protein_id=WP_032750466.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2026080 2027405 . - . ID=gene-PHA56_RS09605;Name=shiA;gbkey=Gene;gene=shiA;gene_biotype=protein_coding;locus_tag=PHA56_RS09605;old_locus_tag=PHA56_09610 NZ_CP116214.1 Protein Homology CDS 2026080 2027405 . - 0 ID=cds-WP_032750462.1;Parent=gene-PHA56_RS09605;Dbxref=Genbank:WP_032750462.1;Name=WP_032750462.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=shiA;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004852360.1;locus_tag=PHA56_RS09605;product=shikimate transporter;protein_id=WP_032750462.1;transl_table=11 NZ_CP116214.1 RefSeq pseudogene 2027709 2027819 . + . ID=gene-PHA56_RS09610;Name=PHA56_RS09610;end_range=2027819,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS09610;old_locus_tag=PHA56_09615;partial=true;pseudo=true NZ_CP116214.1 Protein Homology CDS 2027709 2027819 . + 0 ID=cds-PHA56_RS09610;Parent=gene-PHA56_RS09610;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2027819,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004198821.1;locus_tag=PHA56_RS09610;partial=true;product=oxidoreductase;pseudo=true;transl_table=11 NZ_CP116214.1 RefSeq gene 2027893 2028873 . + . ID=gene-PHA56_RS09615;Name=PHA56_RS09615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS09615;old_locus_tag=PHA56_09620 NZ_CP116214.1 Protein Homology CDS 2027893 2028873 . + 0 ID=cds-WP_271292967.1;Parent=gene-PHA56_RS09615;Dbxref=Genbank:WP_271292967.1;Name=WP_271292967.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000019445.1;locus_tag=PHA56_RS09615;product=IS5-like element IS5 family transposase;protein_id=WP_271292967.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2029080 2029406 . + . ID=gene-PHA56_RS09620;Name=PHA56_RS09620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS09620;old_locus_tag=PHA56_09625 NZ_CP116214.1 Protein Homology CDS 2029080 2029406 . + 0 ID=cds-WP_119834750.1;Parent=gene-PHA56_RS09620;Dbxref=Genbank:WP_119834750.1;Name=WP_119834750.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004890912.1;locus_tag=PHA56_RS09620;product=molybdopterin-dependent oxidoreductase;protein_id=WP_119834750.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2029417 2031342 . + . ID=gene-PHA56_RS09625;Name=PHA56_RS09625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS09625;old_locus_tag=PHA56_09630 NZ_CP116214.1 Protein Homology CDS 2029417 2031342 . + 0 ID=cds-WP_014838905.1;Parent=gene-PHA56_RS09625;Dbxref=Genbank:WP_014838905.1;Name=WP_014838905.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004852356.1;locus_tag=PHA56_RS09625;product=EAL domain-containing protein;protein_id=WP_014838905.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2031548 2031880 . + . ID=gene-PHA56_RS09630;Name=PHA56_RS09630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS09630;old_locus_tag=PHA56_09635 NZ_CP116214.1 Protein Homology CDS 2031548 2031880 . + 0 ID=cds-WP_014230000.1;Parent=gene-PHA56_RS09630;Dbxref=Genbank:WP_014230000.1;Name=WP_014230000.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227813.1;locus_tag=PHA56_RS09630;product=DUF1971 domain-containing protein;protein_id=WP_014230000.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2031889 2032227 . + . ID=gene-PHA56_RS09635;Name=PHA56_RS09635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS09635;old_locus_tag=PHA56_09640 NZ_CP116214.1 Protein Homology CDS 2031889 2032227 . + 0 ID=cds-WP_032751885.1;Parent=gene-PHA56_RS09635;Dbxref=Genbank:WP_032751885.1;Name=WP_032751885.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002911862.1;locus_tag=PHA56_RS09635;product=DUF1869 domain-containing protein;protein_id=WP_032751885.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2032320 2033018 . - . ID=gene-PHA56_RS09640;Name=PHA56_RS09640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS09640;old_locus_tag=PHA56_09645 NZ_CP116214.1 Protein Homology CDS 2032320 2033018 . - 0 ID=cds-WP_004852350.1;Parent=gene-PHA56_RS09640;Dbxref=Genbank:WP_004852350.1;Name=WP_004852350.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226924.1;locus_tag=PHA56_RS09640;product=GntR family transcriptional regulator;protein_id=WP_004852350.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2033278 2034810 . + . ID=gene-PHA56_RS09645;Name=PHA56_RS09645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS09645;old_locus_tag=PHA56_09650 NZ_CP116214.1 Protein Homology CDS 2033278 2034810 . + 0 ID=cds-WP_032750458.1;Parent=gene-PHA56_RS09645;Dbxref=Genbank:WP_032750458.1;Name=WP_032750458.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004113899.1;locus_tag=PHA56_RS09645;product=PTS transporter subunit EIIC;protein_id=WP_032750458.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2034822 2036150 . + . ID=gene-PHA56_RS09650;Name=PHA56_RS09650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS09650;old_locus_tag=PHA56_09655 NZ_CP116214.1 Protein Homology CDS 2034822 2036150 . + 0 ID=cds-WP_014838902.1;Parent=gene-PHA56_RS09650;Dbxref=Genbank:WP_014838902.1;Name=WP_014838902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014838902.1;locus_tag=PHA56_RS09650;product=6-phospho-alpha-glucosidase;protein_id=WP_014838902.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2036129 2037664 . - . ID=gene-PHA56_RS09655;Name=PHA56_RS09655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS09655;old_locus_tag=PHA56_09660 NZ_CP116214.1 Protein Homology CDS 2036129 2037664 . - 0 ID=cds-WP_171817011.1;Parent=gene-PHA56_RS09655;Dbxref=Genbank:WP_171817011.1;Name=WP_171817011.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004852344.1;locus_tag=PHA56_RS09655;product=EAL domain-containing protein;protein_id=WP_171817011.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2037651 2038556 . - . ID=gene-PHA56_RS09660;Name=PHA56_RS09660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS09660;old_locus_tag=PHA56_09665 NZ_CP116214.1 Protein Homology CDS 2037651 2038556 . - 0 ID=cds-WP_014229995.1;Parent=gene-PHA56_RS09660;Dbxref=Genbank:WP_014229995.1;Name=WP_014229995.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313306.1;locus_tag=PHA56_RS09660;product=fimbrial protein;protein_id=WP_014229995.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2038574 2039077 . - . ID=gene-PHA56_RS09665;Name=PHA56_RS09665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS09665;old_locus_tag=PHA56_09670 NZ_CP116214.1 Protein Homology CDS 2038574 2039077 . - 0 ID=cds-WP_025106063.1;Parent=gene-PHA56_RS09665;Dbxref=Genbank:WP_025106063.1;Name=WP_025106063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014838900.1;locus_tag=PHA56_RS09665;product=fimbrial protein;protein_id=WP_025106063.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2039090 2039617 . - . ID=gene-PHA56_RS09670;Name=PHA56_RS09670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS09670;old_locus_tag=PHA56_09675 NZ_CP116214.1 Protein Homology CDS 2039090 2039617 . - 0 ID=cds-WP_014229993.1;Parent=gene-PHA56_RS09670;Dbxref=Genbank:WP_014229993.1;Name=WP_014229993.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228659.1;locus_tag=PHA56_RS09670;product=fimbrial protein;protein_id=WP_014229993.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2039628 2042255 . - . ID=gene-PHA56_RS09675;Name=PHA56_RS09675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS09675;old_locus_tag=PHA56_09680 NZ_CP116214.1 Protein Homology CDS 2039628 2042255 . - 0 ID=cds-WP_032750449.1;Parent=gene-PHA56_RS09675;Dbxref=Genbank:WP_032750449.1;Name=WP_032750449.1;Ontology_term=GO:0009297,GO:0005515,GO:0015473,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein binding|0005515||IEA,fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228658.1;locus_tag=PHA56_RS09675;product=fimbrial biogenesis usher protein;protein_id=WP_032750449.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2042330 2043010 . - . ID=gene-PHA56_RS09680;Name=PHA56_RS09680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS09680;old_locus_tag=PHA56_09685 NZ_CP116214.1 Protein Homology CDS 2042330 2043010 . - 0 ID=cds-WP_170927896.1;Parent=gene-PHA56_RS09680;Dbxref=Genbank:WP_170927896.1;Name=WP_170927896.1;Ontology_term=GO:0071555,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004138862.1;locus_tag=PHA56_RS09680;product=fimbria/pilus periplasmic chaperone;protein_id=WP_170927896.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2043087 2043626 . - . ID=gene-PHA56_RS09685;Name=PHA56_RS09685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS09685;old_locus_tag=PHA56_09690 NZ_CP116214.1 Protein Homology CDS 2043087 2043626 . - 0 ID=cds-WP_014838896.1;Parent=gene-PHA56_RS09685;Dbxref=Genbank:WP_014838896.1;Name=WP_014838896.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228656.1;locus_tag=PHA56_RS09685;product=fimbrial protein;protein_id=WP_014838896.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2043699 2044241 . - . ID=gene-PHA56_RS09690;Name=fimA;gbkey=Gene;gene=fimA;gene_biotype=protein_coding;locus_tag=PHA56_RS09690;old_locus_tag=PHA56_09695 NZ_CP116214.1 Protein Homology CDS 2043699 2044241 . - 0 ID=cds-WP_014229989.1;Parent=gene-PHA56_RS09690;Dbxref=Genbank:WP_014229989.1;Name=WP_014229989.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;gene=fimA;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229989.1;locus_tag=PHA56_RS09690;product=type 1 fimbrial major subunit FimA;protein_id=WP_014229989.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2044281 2044781 . - . ID=gene-PHA56_RS09695;Name=PHA56_RS09695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS09695;old_locus_tag=PHA56_09700 NZ_CP116214.1 Protein Homology CDS 2044281 2044781 . - 0 ID=cds-WP_014229988.1;Parent=gene-PHA56_RS09695;Dbxref=Genbank:WP_014229988.1;Name=WP_014229988.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229988.1;locus_tag=PHA56_RS09695;product=LuxR C-terminal-related transcriptional regulator;protein_id=WP_014229988.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2045586 2046407 . + . ID=gene-PHA56_RS09700;Name=PHA56_RS09700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS09700;old_locus_tag=PHA56_09705 NZ_CP116214.1 Protein Homology CDS 2045586 2046407 . + 0 ID=cds-WP_014229987.1;Parent=gene-PHA56_RS09700;Dbxref=Genbank:WP_014229987.1;Name=WP_014229987.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229987.1;locus_tag=PHA56_RS09700;product=winged helix-turn-helix domain-containing protein;protein_id=WP_014229987.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2046391 2046876 . + . ID=gene-PHA56_RS09705;Name=PHA56_RS09705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS09705;old_locus_tag=PHA56_09710 NZ_CP116214.1 Protein Homology CDS 2046391 2046876 . + 0 ID=cds-WP_014229986.1;Parent=gene-PHA56_RS09705;Dbxref=Genbank:WP_014229986.1;Name=WP_014229986.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229986.1;locus_tag=PHA56_RS09705;product=hypothetical protein;protein_id=WP_014229986.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2047027 2047102 . - . ID=gene-PHA56_RS09710;Name=PHA56_RS09710;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA56_RS09710;old_locus_tag=PHA56_09715 NZ_CP116214.1 tRNAscan-SE tRNA 2047027 2047102 . - . ID=rna-PHA56_RS09710;Parent=gene-PHA56_RS09710;anticodon=(pos:complement(2047067..2047069));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS09710;product=tRNA-Asn NZ_CP116214.1 tRNAscan-SE exon 2047027 2047102 . - . ID=exon-PHA56_RS09710-1;Parent=rna-PHA56_RS09710;anticodon=(pos:complement(2047067..2047069));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS09710;product=tRNA-Asn NZ_CP116214.1 RefSeq gene 2047433 2048350 . + . ID=gene-PHA56_RS09715;Name=nac;gbkey=Gene;gene=nac;gene_biotype=protein_coding;locus_tag=PHA56_RS09715;old_locus_tag=PHA56_09720 NZ_CP116214.1 Protein Homology CDS 2047433 2048350 . + 0 ID=cds-WP_004852321.1;Parent=gene-PHA56_RS09715;Dbxref=Genbank:WP_004852321.1;Name=WP_004852321.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=nac;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227759.1;locus_tag=PHA56_RS09715;product=nitrogen assimilation transcriptional regulator NAC;protein_id=WP_004852321.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2048457 2049407 . + . ID=gene-PHA56_RS09720;Name=cbl;gbkey=Gene;gene=cbl;gene_biotype=protein_coding;locus_tag=PHA56_RS09720;old_locus_tag=PHA56_09725 NZ_CP116214.1 Protein Homology CDS 2048457 2049407 . + 0 ID=cds-WP_014229985.1;Parent=gene-PHA56_RS09720;Dbxref=Genbank:WP_014229985.1;Name=WP_014229985.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=cbl;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227758.1;locus_tag=PHA56_RS09720;product=HTH-type transcriptional regulator Cbl;protein_id=WP_014229985.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2049519 2050427 . + . ID=gene-PHA56_RS09725;Name=ldtA;gbkey=Gene;gene=ldtA;gene_biotype=protein_coding;locus_tag=PHA56_RS09725;old_locus_tag=PHA56_09730 NZ_CP116214.1 Protein Homology CDS 2049519 2050427 . + 0 ID=cds-WP_194247384.1;Parent=gene-PHA56_RS09725;Dbxref=Genbank:WP_194247384.1;Name=WP_194247384.1;Ontology_term=GO:0016740;gbkey=CDS;gene=ldtA;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004852317.1;locus_tag=PHA56_RS09725;product=L%2CD-transpeptidase;protein_id=WP_194247384.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2050549 2051154 . - . ID=gene-PHA56_RS09730;Name=PHA56_RS09730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS09730;old_locus_tag=PHA56_09735 NZ_CP116214.1 Protein Homology CDS 2050549 2051154 . - 0 ID=cds-WP_032750440.1;Parent=gene-PHA56_RS09730;Dbxref=Genbank:WP_032750440.1;Name=WP_032750440.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004852315.1;locus_tag=PHA56_RS09730;product=glutathione S-transferase family protein;protein_id=WP_032750440.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2051334 2052260 . + . ID=gene-PHA56_RS09735;Name=PHA56_RS09735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS09735;old_locus_tag=PHA56_09740 NZ_CP116214.1 Protein Homology CDS 2051334 2052260 . + 0 ID=cds-WP_014229983.1;Parent=gene-PHA56_RS09735;Dbxref=Genbank:WP_014229983.1;Name=WP_014229983.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229983.1;locus_tag=PHA56_RS09735;product=LysR substrate-binding domain-containing protein;protein_id=WP_014229983.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2052298 2053296 . - . ID=gene-PHA56_RS09740;Name=PHA56_RS09740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS09740;old_locus_tag=PHA56_09745 NZ_CP116214.1 Protein Homology CDS 2052298 2053296 . - 0 ID=cds-WP_014229982.1;Parent=gene-PHA56_RS09740;Dbxref=Genbank:WP_014229982.1;Name=WP_014229982.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226691.1;locus_tag=PHA56_RS09740;product=aldo/keto reductase;protein_id=WP_014229982.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2053397 2054311 . + . ID=gene-PHA56_RS09745;Name=PHA56_RS09745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS09745;old_locus_tag=PHA56_09750 NZ_CP116214.1 Protein Homology CDS 2053397 2054311 . + 0 ID=cds-WP_014229981.1;Parent=gene-PHA56_RS09745;Dbxref=Genbank:WP_014229981.1;Name=WP_014229981.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004122253.1;locus_tag=PHA56_RS09745;product=LysR family transcriptional regulator;protein_id=WP_014229981.1;transl_table=11 NZ_CP116214.1 RefSeq pseudogene 2054502 2054582 . - . ID=gene-PHA56_RS09750;Name=PHA56_RS09750;end_range=2054582,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS09750;old_locus_tag=PHA56_09755;partial=true;pseudo=true NZ_CP116214.1 Protein Homology CDS 2054502 2054582 . - 0 ID=cds-PHA56_RS09750;Parent=gene-PHA56_RS09750;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=2054582,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006322095.1;locus_tag=PHA56_RS09750;partial=true;product=molybdopterin-binding protein;pseudo=true;transl_table=11 NZ_CP116214.1 RefSeq gene 2055293 2055550 . + . ID=gene-PHA56_RS09755;Name=PHA56_RS09755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS09755;old_locus_tag=PHA56_09760 NZ_CP116214.1 Protein Homology CDS 2055293 2055550 . + 0 ID=cds-WP_004852307.1;Parent=gene-PHA56_RS09755;Dbxref=Genbank:WP_004852307.1;Name=WP_004852307.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000288814.1;locus_tag=PHA56_RS09755;product=antitoxin;protein_id=WP_004852307.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2055551 2055883 . + . ID=gene-PHA56_RS09760;Name=PHA56_RS09760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS09760;old_locus_tag=PHA56_09765 NZ_CP116214.1 Protein Homology CDS 2055551 2055883 . + 0 ID=cds-WP_014229979.1;Parent=gene-PHA56_RS09760;Dbxref=Genbank:WP_014229979.1;Name=WP_014229979.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016161430.1;locus_tag=PHA56_RS09760;product=type II toxin-antitoxin system PemK/MazF family toxin;protein_id=WP_014229979.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2055936 2056011 . - . ID=gene-PHA56_RS09765;Name=PHA56_RS09765;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA56_RS09765;old_locus_tag=PHA56_09770 NZ_CP116214.1 tRNAscan-SE tRNA 2055936 2056011 . - . ID=rna-PHA56_RS09765;Parent=gene-PHA56_RS09765;anticodon=(pos:complement(2055976..2055978));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS09765;product=tRNA-Asn NZ_CP116214.1 tRNAscan-SE exon 2055936 2056011 . - . ID=exon-PHA56_RS09765-1;Parent=rna-PHA56_RS09765;anticodon=(pos:complement(2055976..2055978));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS09765;product=tRNA-Asn NZ_CP116214.1 RefSeq gene 2056206 2057663 . + . ID=gene-PHA56_RS09770;Name=PHA56_RS09770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS09770;old_locus_tag=PHA56_09775 NZ_CP116214.1 Protein Homology CDS 2056206 2057663 . + 0 ID=cds-WP_014229916.1;Parent=gene-PHA56_RS09770;Dbxref=Genbank:WP_014229916.1;Name=WP_014229916.1;Ontology_term=GO:0055085,GO:0015297;gbkey=CDS;go_function=antiporter activity|0015297||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229916.1;locus_tag=PHA56_RS09770;product=EmmdR/YeeO family multidrug/toxin efflux MATE transporter;protein_id=WP_014229916.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2057789 2057864 . + . ID=gene-PHA56_RS09775;Name=PHA56_RS09775;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA56_RS09775;old_locus_tag=PHA56_09780 NZ_CP116214.1 tRNAscan-SE tRNA 2057789 2057864 . + . ID=rna-PHA56_RS09775;Parent=gene-PHA56_RS09775;anticodon=(pos:2057822..2057824);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS09775;product=tRNA-Asn NZ_CP116214.1 tRNAscan-SE exon 2057789 2057864 . + . ID=exon-PHA56_RS09775-1;Parent=rna-PHA56_RS09775;anticodon=(pos:2057822..2057824);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS09775;product=tRNA-Asn NZ_CP116214.1 RefSeq gene 2058626 2060080 . - . ID=gene-PHA56_RS09780;Name=PHA56_RS09780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS09780;old_locus_tag=PHA56_09785 NZ_CP116214.1 Protein Homology CDS 2058626 2060080 . - 0 ID=cds-WP_014229909.1;Parent=gene-PHA56_RS09780;Dbxref=Genbank:WP_014229909.1;Name=WP_014229909.1;Ontology_term=GO:0009116,GO:0044209,GO:0008714;gbkey=CDS;go_function=AMP nucleosidase activity|0008714||IEA;go_process=nucleoside metabolic process|0009116||IEA,AMP salvage|0044209||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227804.1;locus_tag=PHA56_RS09780;product=AMP nucleosidase;protein_id=WP_014229909.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2060213 2060470 . - . ID=gene-PHA56_RS09785;Name=PHA56_RS09785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS09785;old_locus_tag=PHA56_09790 NZ_CP116214.1 Protein Homology CDS 2060213 2060470 . - 0 ID=cds-WP_014229908.1;Parent=gene-PHA56_RS09785;Dbxref=Genbank:WP_014229908.1;Name=WP_014229908.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229908.1;locus_tag=PHA56_RS09785;product=histidine kinase;protein_id=WP_014229908.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2060646 2062181 . + . ID=gene-PHA56_RS09790;Name=PHA56_RS09790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS09790;old_locus_tag=PHA56_09795 NZ_CP116214.1 Protein Homology CDS 2060646 2062181 . + 0 ID=cds-WP_032693516.1;Parent=gene-PHA56_RS09790;Dbxref=Genbank:WP_032693516.1;Name=WP_032693516.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004136547.1;locus_tag=PHA56_RS09790;product=alpha/beta fold hydrolase;protein_id=WP_032693516.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2062173 2063105 . - . ID=gene-PHA56_RS09795;Name=PHA56_RS09795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS09795;old_locus_tag=PHA56_09800 NZ_CP116214.1 Protein Homology CDS 2062173 2063105 . - 0 ID=cds-WP_032693515.1;Parent=gene-PHA56_RS09795;Dbxref=Genbank:WP_032693515.1;Name=WP_032693515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004141186.1;locus_tag=PHA56_RS09795;product=nucleoside recognition domain-containing protein;protein_id=WP_032693515.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2063332 2063907 . + . ID=gene-PHA56_RS09800;Name=pagP;gbkey=Gene;gene=pagP;gene_biotype=protein_coding;locus_tag=PHA56_RS09800;old_locus_tag=PHA56_09805 NZ_CP116214.1 Protein Homology CDS 2063332 2063907 . + 0 ID=cds-WP_032693514.1;Parent=gene-PHA56_RS09800;Dbxref=Genbank:WP_032693514.1;Name=WP_032693514.1;gbkey=CDS;gene=pagP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004852289.1;locus_tag=PHA56_RS09800;product=lipid IV(A) palmitoyltransferase PagP;protein_id=WP_032693514.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2063942 2064865 . - . ID=gene-PHA56_RS09805;Name=PHA56_RS09805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS09805;old_locus_tag=PHA56_09810 NZ_CP116214.1 Protein Homology CDS 2063942 2064865 . - 0 ID=cds-WP_160741211.1;Parent=gene-PHA56_RS09805;Dbxref=Genbank:WP_160741211.1;Name=WP_160741211.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225915.1;locus_tag=PHA56_RS09805;product=acyltransferase family protein;protein_id=WP_160741211.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2064904 2067966 . - . ID=gene-PHA56_RS09810;Name=PHA56_RS09810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS09810;old_locus_tag=PHA56_09815 NZ_CP116214.1 Protein Homology CDS 2064904 2067966 . - 0 ID=cds-WP_032750437.1;Parent=gene-PHA56_RS09810;Dbxref=Genbank:WP_032750437.1;Name=WP_032750437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014838865.1;locus_tag=PHA56_RS09810;product=efflux RND transporter permease subunit;protein_id=WP_032750437.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2067966 2069051 . - . ID=gene-PHA56_RS09815;Name=PHA56_RS09815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS09815;old_locus_tag=PHA56_09820 NZ_CP116214.1 Protein Homology CDS 2067966 2069051 . - 0 ID=cds-WP_032750435.1;Parent=gene-PHA56_RS09815;Dbxref=Genbank:WP_032750435.1;Name=WP_032750435.1;Ontology_term=GO:0006810,GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004223727.1;locus_tag=PHA56_RS09815;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_032750435.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2069585 2070016 . + . ID=gene-PHA56_RS09820;Name=PHA56_RS09820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS09820;old_locus_tag=PHA56_09825 NZ_CP116214.1 Protein Homology CDS 2069585 2070016 . + 0 ID=cds-WP_014229901.1;Parent=gene-PHA56_RS09820;Dbxref=Genbank:WP_014229901.1;Name=WP_014229901.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229901.1;locus_tag=PHA56_RS09820;product=universal stress protein;protein_id=WP_014229901.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2070067 2072754 . + . ID=gene-PHA56_RS09825;Name=PHA56_RS09825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS09825;old_locus_tag=PHA56_09830 NZ_CP116214.1 Protein Homology CDS 2070067 2072754 . + 0 ID=cds-WP_014229900.1;Parent=gene-PHA56_RS09825;Dbxref=Genbank:WP_014229900.1;Name=WP_014229900.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004122206.1;locus_tag=PHA56_RS09825;product=cation-transporting P-type ATPase;protein_id=WP_014229900.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2072943 2073872 . + . ID=gene-PHA56_RS09830;Name=PHA56_RS09830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS09830;old_locus_tag=PHA56_09835 NZ_CP116214.1 Protein Homology CDS 2072943 2073872 . + 0 ID=cds-WP_032750432.1;Parent=gene-PHA56_RS09830;Dbxref=Genbank:WP_032750432.1;Name=WP_032750432.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014838862.1;locus_tag=PHA56_RS09830;product=alpha/beta hydrolase-fold protein;protein_id=WP_032750432.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2073946 2074353 . - . ID=gene-PHA56_RS09835;Name=PHA56_RS09835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS09835;old_locus_tag=PHA56_09840 NZ_CP116214.1 Protein Homology CDS 2073946 2074353 . - 0 ID=cds-WP_014229898.1;Parent=gene-PHA56_RS09835;Dbxref=Genbank:WP_014229898.1;Name=WP_014229898.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017145610.1;locus_tag=PHA56_RS09835;product=cupin domain-containing protein;protein_id=WP_014229898.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2074481 2075383 . + . ID=gene-PHA56_RS09840;Name=PHA56_RS09840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS09840;old_locus_tag=PHA56_09845 NZ_CP116214.1 Protein Homology CDS 2074481 2075383 . + 0 ID=cds-WP_032750431.1;Parent=gene-PHA56_RS09840;Dbxref=Genbank:WP_032750431.1;Name=WP_032750431.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229897.1;locus_tag=PHA56_RS09840;product=LysR family transcriptional regulator;protein_id=WP_032750431.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2075443 2076363 . - . ID=gene-PHA56_RS09845;Name=PHA56_RS09845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS09845;old_locus_tag=PHA56_09850 NZ_CP116214.1 Protein Homology CDS 2075443 2076363 . - 0 ID=cds-WP_014229896.1;Parent=gene-PHA56_RS09845;Dbxref=Genbank:WP_014229896.1;Name=WP_014229896.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227756.1;locus_tag=PHA56_RS09845;product=LysR family transcriptional regulator;protein_id=WP_014229896.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2076505 2076900 . + . ID=gene-PHA56_RS09850;Name=PHA56_RS09850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS09850;old_locus_tag=PHA56_09855 NZ_CP116214.1 Protein Homology CDS 2076505 2076900 . + 0 ID=cds-WP_014229895.1;Parent=gene-PHA56_RS09850;Dbxref=Genbank:WP_014229895.1;Name=WP_014229895.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014838858.1;locus_tag=PHA56_RS09850;product=RidA family protein;protein_id=WP_014229895.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2076943 2077902 . + . ID=gene-PHA56_RS09855;Name=PHA56_RS09855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS09855;old_locus_tag=PHA56_09860 NZ_CP116214.1 Protein Homology CDS 2076943 2077902 . + 0 ID=cds-WP_032750430.1;Parent=gene-PHA56_RS09855;Dbxref=Genbank:WP_032750430.1;Name=WP_032750430.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004946529.1;locus_tag=PHA56_RS09855;product=zinc-binding alcohol dehydrogenase family protein;protein_id=WP_032750430.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2078103 2078178 . - . ID=gene-PHA56_RS09860;Name=PHA56_RS09860;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA56_RS09860;old_locus_tag=PHA56_09865 NZ_CP116214.1 tRNAscan-SE tRNA 2078103 2078178 . - . ID=rna-PHA56_RS09860;Parent=gene-PHA56_RS09860;anticodon=(pos:complement(2078143..2078145));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS09860;product=tRNA-Asn NZ_CP116214.1 tRNAscan-SE exon 2078103 2078178 . - . ID=exon-PHA56_RS09860-1;Parent=rna-PHA56_RS09860;anticodon=(pos:complement(2078143..2078145));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS09860;product=tRNA-Asn NZ_CP116214.1 RefSeq gene 2078279 2079079 . - . ID=gene-PHA56_RS09865;Name=mtfA;gbkey=Gene;gene=mtfA;gene_biotype=protein_coding;locus_tag=PHA56_RS09865;old_locus_tag=PHA56_09870 NZ_CP116214.1 Protein Homology CDS 2078279 2079079 . - 0 ID=cds-WP_161505340.1;Parent=gene-PHA56_RS09865;Dbxref=Genbank:WP_161505340.1;Name=WP_161505340.1;Ontology_term=GO:0008237;gbkey=CDS;gene=mtfA;go_function=metallopeptidase activity|0008237||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227754.1;locus_tag=PHA56_RS09865;product=DgsA anti-repressor MtfA;protein_id=WP_161505340.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2079170 2079259 . + . ID=gene-PHA56_RS09870;Name=PHA56_RS09870;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA56_RS09870;old_locus_tag=PHA56_09875 NZ_CP116214.1 tRNAscan-SE tRNA 2079170 2079259 . + . ID=rna-PHA56_RS09870;Parent=gene-PHA56_RS09870;anticodon=(pos:2079204..2079206);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS09870;product=tRNA-Ser NZ_CP116214.1 tRNAscan-SE exon 2079170 2079259 . + . ID=exon-PHA56_RS09870-1;Parent=rna-PHA56_RS09870;anticodon=(pos:2079204..2079206);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS09870;product=tRNA-Ser NZ_CP116214.1 RefSeq gene 2079701 2081137 . - . ID=gene-PHA56_RS09875;Name=PHA56_RS09875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS09875;old_locus_tag=PHA56_09880 NZ_CP116214.1 Protein Homology CDS 2079701 2081137 . - 0 ID=cds-WP_223226716.1;Parent=gene-PHA56_RS09875;Dbxref=Genbank:WP_223226716.1;Name=WP_223226716.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229892.1;locus_tag=PHA56_RS09875;product=glucosyltransferase domain-containing protein;protein_id=WP_223226716.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2081155 2082147 . - . ID=gene-PHA56_RS09880;Name=PHA56_RS09880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS09880;old_locus_tag=PHA56_09885 NZ_CP116214.1 Protein Homology CDS 2081155 2082147 . - 0 ID=cds-WP_014229891.1;Parent=gene-PHA56_RS09880;Dbxref=Genbank:WP_014229891.1;Name=WP_014229891.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004852235.1;locus_tag=PHA56_RS09880;product=glycosyltransferase family 2 protein;protein_id=WP_014229891.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2082144 2082533 . - . ID=gene-PHA56_RS09885;Name=PHA56_RS09885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS09885;old_locus_tag=PHA56_09890 NZ_CP116214.1 Protein Homology CDS 2082144 2082533 . - 0 ID=cds-WP_025106097.1;Parent=gene-PHA56_RS09885;Dbxref=Genbank:WP_025106097.1;Name=WP_025106097.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004136578.1;locus_tag=PHA56_RS09885;product=GtrA family protein;protein_id=WP_025106097.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2083178 2084248 . - . ID=gene-PHA56_RS09890;Name=PHA56_RS09890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS09890;old_locus_tag=PHA56_09895 NZ_CP116214.1 Protein Homology CDS 2083178 2084248 . - 0 ID=cds-WP_014229889.1;Parent=gene-PHA56_RS09890;Dbxref=Genbank:WP_014229889.1;Name=WP_014229889.1;Ontology_term=GO:0015288,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000824385.1;locus_tag=PHA56_RS09890;product=porin;protein_id=WP_014229889.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2084876 2085157 . + . ID=gene-PHA56_RS09895;Name=drpB;gbkey=Gene;gene=drpB;gene_biotype=protein_coding;locus_tag=PHA56_RS09895;old_locus_tag=PHA56_09900 NZ_CP116214.1 Protein Homology CDS 2084876 2085157 . + 0 ID=cds-WP_032750426.1;Parent=gene-PHA56_RS09895;Dbxref=Genbank:WP_032750426.1;Name=WP_032750426.1;gbkey=CDS;gene=drpB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004852229.1;locus_tag=PHA56_RS09895;product=cell division protein DrpB;protein_id=WP_032750426.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2085200 2085895 . + . ID=gene-PHA56_RS09900;Name=PHA56_RS09900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS09900;old_locus_tag=PHA56_09905 NZ_CP116214.1 Protein Homology CDS 2085200 2085895 . + 0 ID=cds-WP_014229888.1;Parent=gene-PHA56_RS09900;Dbxref=Genbank:WP_014229888.1;Name=WP_014229888.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017145615.1;locus_tag=PHA56_RS09900;product=phosphohydrolase;protein_id=WP_014229888.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2085952 2087385 . + . ID=gene-PHA56_RS09905;Name=PHA56_RS09905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS09905;old_locus_tag=PHA56_09910 NZ_CP116214.1 Protein Homology CDS 2085952 2087385 . + 0 ID=cds-WP_032751884.1;Parent=gene-PHA56_RS09905;Dbxref=Genbank:WP_032751884.1;Name=WP_032751884.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019704254.1;locus_tag=PHA56_RS09905;product=DNA cytosine methyltransferase;protein_id=WP_032751884.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2087366 2087860 . + . ID=gene-PHA56_RS09910;Name=PHA56_RS09910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS09910;old_locus_tag=PHA56_09915 NZ_CP116214.1 Protein Homology CDS 2087366 2087860 . + 0 ID=cds-WP_014229886.1;Parent=gene-PHA56_RS09910;Dbxref=Genbank:WP_014229886.1;Name=WP_014229886.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229886.1;locus_tag=PHA56_RS09910;product=very short patch repair endonuclease;protein_id=WP_014229886.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2087835 2088746 . - . ID=gene-PHA56_RS09915;Name=yedA;gbkey=Gene;gene=yedA;gene_biotype=protein_coding;locus_tag=PHA56_RS09915;old_locus_tag=PHA56_09920 NZ_CP116214.1 Protein Homology CDS 2087835 2088746 . - 0 ID=cds-WP_032750424.1;Parent=gene-PHA56_RS09915;Dbxref=Genbank:WP_032750424.1;Name=WP_032750424.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yedA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227747.1;locus_tag=PHA56_RS09915;product=drug/metabolite exporter YedA;protein_id=WP_032750424.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2088930 2089841 . + . ID=gene-PHA56_RS09920;Name=PHA56_RS09920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS09920;old_locus_tag=PHA56_09925 NZ_CP116214.1 Protein Homology CDS 2088930 2089841 . + 0 ID=cds-WP_014229884.1;Parent=gene-PHA56_RS09920;Dbxref=Genbank:WP_014229884.1;Name=WP_014229884.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227746.1;locus_tag=PHA56_RS09920;product=DUF808 domain-containing protein;protein_id=WP_014229884.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2089917 2090096 . + . ID=gene-PHA56_RS09925;Name=PHA56_RS09925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS09925;old_locus_tag=PHA56_09930 NZ_CP116214.1 Protein Homology CDS 2089917 2090096 . + 0 ID=cds-WP_025106102.1;Parent=gene-PHA56_RS09925;Dbxref=Genbank:WP_025106102.1;Name=WP_025106102.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004113841.1;locus_tag=PHA56_RS09925;product=DUF2158 domain-containing protein;protein_id=WP_025106102.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2090204 2091871 . + . ID=gene-PHA56_RS09930;Name=dgcQ;gbkey=Gene;gene=dgcQ;gene_biotype=protein_coding;locus_tag=PHA56_RS09930;old_locus_tag=PHA56_09935 NZ_CP116214.1 Protein Homology CDS 2090204 2091871 . + 0 ID=cds-WP_032750423.1;Parent=gene-PHA56_RS09930;Dbxref=Genbank:WP_032750423.1;Name=WP_032750423.1;gbkey=CDS;gene=dgcQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004122134.1;locus_tag=PHA56_RS09930;product=cellulose biosynthesis regulator diguanylate cyclase DgcQ;protein_id=WP_032750423.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2092201 2092416 . - . ID=gene-PHA56_RS09935;Name=yodD;gbkey=Gene;gene=yodD;gene_biotype=protein_coding;locus_tag=PHA56_RS09935;old_locus_tag=PHA56_09940 NZ_CP116214.1 Protein Homology CDS 2092201 2092416 . - 0 ID=cds-WP_014229881.1;Parent=gene-PHA56_RS09935;Dbxref=Genbank:WP_014229881.1;Name=WP_014229881.1;gbkey=CDS;gene=yodD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004852216.1;locus_tag=PHA56_RS09935;product=YodD family peroxide/acid resistance protein;protein_id=WP_014229881.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2092549 2092737 . + . ID=gene-PHA56_RS09940;Name=dsrB;gbkey=Gene;gene=dsrB;gene_biotype=protein_coding;locus_tag=PHA56_RS09940;old_locus_tag=PHA56_09945 NZ_CP116214.1 Protein Homology CDS 2092549 2092737 . + 0 ID=cds-WP_004136599.1;Parent=gene-PHA56_RS09940;Dbxref=Genbank:WP_004136599.1;Name=WP_004136599.1;gbkey=CDS;gene=dsrB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004122127.1;locus_tag=PHA56_RS09940;product=protein DsrB;protein_id=WP_004136599.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2092779 2093402 . - . ID=gene-PHA56_RS09945;Name=rcsA;gbkey=Gene;gene=rcsA;gene_biotype=protein_coding;locus_tag=PHA56_RS09945;old_locus_tag=PHA56_09950 NZ_CP116214.1 Protein Homology CDS 2092779 2093402 . - 0 ID=cds-WP_014229880.1;Parent=gene-PHA56_RS09945;Dbxref=Genbank:WP_014229880.1;Name=WP_014229880.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=rcsA;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004200340.1;locus_tag=PHA56_RS09945;product=transcriptional regulator RcsA;protein_id=WP_014229880.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2093859 2094275 . + . ID=gene-PHA56_RS09950;Name=yedD;gbkey=Gene;gene=yedD;gene_biotype=protein_coding;locus_tag=PHA56_RS09950;old_locus_tag=PHA56_09955 NZ_CP116214.1 Protein Homology CDS 2093859 2094275 . + 0 ID=cds-WP_161505342.1;Parent=gene-PHA56_RS09950;Dbxref=Genbank:WP_161505342.1;Name=WP_161505342.1;gbkey=CDS;gene=yedD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014838851.1;locus_tag=PHA56_RS09950;product=lipoprotein;protein_id=WP_161505342.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2094325 2095812 . - . ID=gene-PHA56_RS09955;Name=amyA;gbkey=Gene;gene=amyA;gene_biotype=protein_coding;locus_tag=PHA56_RS09955;old_locus_tag=PHA56_09960 NZ_CP116214.1 Protein Homology CDS 2094325 2095812 . - 0 ID=cds-WP_032750420.1;Parent=gene-PHA56_RS09955;Dbxref=Genbank:WP_032750420.1;Name=WP_032750420.1;Ontology_term=GO:0005975,GO:0004553,GO:0005509;gbkey=CDS;gene=amyA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,calcium ion binding|0005509||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004136602.1;locus_tag=PHA56_RS09955;product=alpha-amylase;protein_id=WP_032750420.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2096014 2096814 . + . ID=gene-PHA56_RS09960;Name=tcyJ;gbkey=Gene;gene=tcyJ;gene_biotype=protein_coding;locus_tag=PHA56_RS09960;old_locus_tag=PHA56_09965 NZ_CP116214.1 Protein Homology CDS 2096014 2096814 . + 0 ID=cds-WP_032750417.1;Parent=gene-PHA56_RS09960;Dbxref=Genbank:WP_032750417.1;Name=WP_032750417.1;Ontology_term=GO:0015276,GO:0016020;gbkey=CDS;gene=tcyJ;go_component=membrane|0016020||IEA;go_function=ligand-gated monoatomic ion channel activity|0015276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227739.1;locus_tag=PHA56_RS09960;product=cystine ABC transporter substrate-binding protein;protein_id=WP_032750417.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2096910 2097896 . + . ID=gene-PHA56_RS09965;Name=dcyD;gbkey=Gene;gene=dcyD;gene_biotype=protein_coding;locus_tag=PHA56_RS09965;old_locus_tag=PHA56_09970 NZ_CP116214.1 Protein Homology CDS 2096910 2097896 . + 0 ID=cds-WP_014838849.1;Parent=gene-PHA56_RS09965;Dbxref=Genbank:WP_014838849.1;Name=WP_014838849.1;Ontology_term=GO:0019148;gbkey=CDS;gene=dcyD;go_function=D-cysteine desulfhydrase activity|0019148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227738.1;locus_tag=PHA56_RS09965;product=D-cysteine desulfhydrase;protein_id=WP_014838849.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2097912 2098580 . + . ID=gene-PHA56_RS09970;Name=tcyL;gbkey=Gene;gene=tcyL;gene_biotype=protein_coding;locus_tag=PHA56_RS09970;old_locus_tag=PHA56_09975 NZ_CP116214.1 Protein Homology CDS 2097912 2098580 . + 0 ID=cds-WP_004103458.1;Parent=gene-PHA56_RS09970;Dbxref=Genbank:WP_004103458.1;Name=WP_004103458.1;gbkey=CDS;gene=tcyL;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227737.1;locus_tag=PHA56_RS09970;product=cystine ABC transporter permease;protein_id=WP_004103458.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2098577 2099329 . + . ID=gene-PHA56_RS09975;Name=yecC;gbkey=Gene;gene=yecC;gene_biotype=protein_coding;locus_tag=PHA56_RS09975;old_locus_tag=PHA56_09980 NZ_CP116214.1 Protein Homology CDS 2098577 2099329 . + 0 ID=cds-WP_004852203.1;Parent=gene-PHA56_RS09975;Dbxref=Genbank:WP_004852203.1;Name=WP_004852203.1;Ontology_term=GO:0003333,GO:0005524,GO:0015424;gbkey=CDS;gene=yecC;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416427.1;locus_tag=PHA56_RS09975;product=L-cystine ABC transporter ATP-binding protein YecC;protein_id=WP_004852203.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2099629 2100351 . + . ID=gene-PHA56_RS09980;Name=sdiA;gbkey=Gene;gene=sdiA;gene_biotype=protein_coding;locus_tag=PHA56_RS09980;old_locus_tag=PHA56_09985 NZ_CP116214.1 Protein Homology CDS 2099629 2100351 . + 0 ID=cds-WP_014229875.1;Parent=gene-PHA56_RS09980;Dbxref=Genbank:WP_014229875.1;Name=WP_014229875.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=sdiA;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227735.1;locus_tag=PHA56_RS09980;product=transcriptional regulator SdiA;protein_id=WP_014229875.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2100419 2100643 . - . ID=gene-PHA56_RS09985;Name=PHA56_RS09985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS09985;old_locus_tag=PHA56_09990 NZ_CP116214.1 Protein Homology CDS 2100419 2100643 . - 0 ID=cds-WP_004122104.1;Parent=gene-PHA56_RS09985;Dbxref=Genbank:WP_004122104.1;Name=WP_004122104.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227734.1;locus_tag=PHA56_RS09985;product=DUF2594 family protein;protein_id=WP_004122104.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2101107 2101763 . + . ID=gene-PHA56_RS09990;Name=uvrY;gbkey=Gene;gene=uvrY;gene_biotype=protein_coding;locus_tag=PHA56_RS09990;old_locus_tag=PHA56_09995 NZ_CP116214.1 Protein Homology CDS 2101107 2101763 . + 0 ID=cds-WP_004122102.1;Parent=gene-PHA56_RS09990;Dbxref=Genbank:WP_004122102.1;Name=WP_004122102.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=uvrY;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310679.1;locus_tag=PHA56_RS09990;product=UvrY/SirA/GacA family response regulator transcription factor;protein_id=WP_004122102.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2101760 2103592 . + . ID=gene-PHA56_RS09995;Name=uvrC;gbkey=Gene;gene=uvrC;gene_biotype=protein_coding;locus_tag=PHA56_RS09995;old_locus_tag=PHA56_10000 NZ_CP116214.1 Protein Homology CDS 2101760 2103592 . + 0 ID=cds-WP_004852196.1;Parent=gene-PHA56_RS09995;Dbxref=Genbank:WP_004852196.1;Name=WP_004852196.1;Ontology_term=GO:0006289,GO:0009381,GO:0009380;gbkey=CDS;gene=uvrC;go_component=excinuclease repair complex|0009380||IEA;go_function=excinuclease ABC activity|0009381||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227732.1;locus_tag=PHA56_RS09995;product=excinuclease ABC subunit UvrC;protein_id=WP_004852196.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2103650 2104198 . + . ID=gene-PHA56_RS10000;Name=pgsA;gbkey=Gene;gene=pgsA;gene_biotype=protein_coding;locus_tag=PHA56_RS10000;old_locus_tag=PHA56_10005 NZ_CP116214.1 Protein Homology CDS 2103650 2104198 . + 0 ID=cds-WP_004122100.1;Parent=gene-PHA56_RS10000;Dbxref=Genbank:WP_004122100.1;Name=WP_004122100.1;gbkey=CDS;gene=pgsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310677.1;locus_tag=PHA56_RS10000;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;protein_id=WP_004122100.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2104350 2104425 . + . ID=gene-PHA56_RS10005;Name=PHA56_RS10005;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA56_RS10005;old_locus_tag=PHA56_10010 NZ_CP116214.1 tRNAscan-SE tRNA 2104350 2104425 . + . ID=rna-PHA56_RS10005;Parent=gene-PHA56_RS10005;anticodon=(pos:2104383..2104385);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS10005;product=tRNA-Gly NZ_CP116214.1 tRNAscan-SE exon 2104350 2104425 . + . ID=exon-PHA56_RS10005-1;Parent=rna-PHA56_RS10005;anticodon=(pos:2104383..2104385);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS10005;product=tRNA-Gly NZ_CP116214.1 RefSeq gene 2104464 2104537 . + . ID=gene-PHA56_RS10010;Name=PHA56_RS10010;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA56_RS10010;old_locus_tag=PHA56_10015 NZ_CP116214.1 tRNAscan-SE tRNA 2104464 2104537 . + . ID=rna-PHA56_RS10010;Parent=gene-PHA56_RS10010;anticodon=(pos:2104496..2104498);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS10010;product=tRNA-Cys NZ_CP116214.1 tRNAscan-SE exon 2104464 2104537 . + . ID=exon-PHA56_RS10010-1;Parent=rna-PHA56_RS10010;anticodon=(pos:2104496..2104498);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS10010;product=tRNA-Cys NZ_CP116214.1 RefSeq gene 2104551 2104637 . + . ID=gene-PHA56_RS10015;Name=PHA56_RS10015;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA56_RS10015;old_locus_tag=PHA56_10020 NZ_CP116214.1 tRNAscan-SE tRNA 2104551 2104637 . + . ID=rna-PHA56_RS10015;Parent=gene-PHA56_RS10015;anticodon=(pos:2104585..2104587);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS10015;product=tRNA-Leu NZ_CP116214.1 tRNAscan-SE exon 2104551 2104637 . + . ID=exon-PHA56_RS10015-1;Parent=rna-PHA56_RS10015;anticodon=(pos:2104585..2104587);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS10015;product=tRNA-Leu NZ_CP116214.1 RefSeq gene 2104834 2105721 . + . ID=gene-PHA56_RS10020;Name=PHA56_RS10020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS10020;old_locus_tag=PHA56_10025 NZ_CP116214.1 Protein Homology CDS 2104834 2105721 . + 0 ID=cds-WP_014838847.1;Parent=gene-PHA56_RS10020;Dbxref=Genbank:WP_014838847.1;Name=WP_014838847.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004852193.1;locus_tag=PHA56_RS10020;product=dihydrodipicolinate synthase family protein;protein_id=WP_014838847.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2105788 2106456 . + . ID=gene-PHA56_RS10025;Name=PHA56_RS10025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS10025;old_locus_tag=PHA56_10030 NZ_CP116214.1 Protein Homology CDS 2105788 2106456 . + 0 ID=cds-WP_014229873.1;Parent=gene-PHA56_RS10025;Dbxref=Genbank:WP_014229873.1;Name=WP_014229873.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004141106.1;locus_tag=PHA56_RS10025;product=YecA family protein;protein_id=WP_014229873.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2106486 2107697 . - . ID=gene-PHA56_RS10030;Name=tyrP;gbkey=Gene;gene=tyrP;gene_biotype=protein_coding;locus_tag=PHA56_RS10030;old_locus_tag=PHA56_10035 NZ_CP116214.1 Protein Homology CDS 2106486 2107697 . - 0 ID=cds-WP_032750415.1;Parent=gene-PHA56_RS10030;Dbxref=Genbank:WP_032750415.1;Name=WP_032750415.1;Ontology_term=GO:0015801,GO:0015173,GO:0005886;gbkey=CDS;gene=tyrP;go_component=plasma membrane|0005886||IEA;go_function=aromatic amino acid transmembrane transporter activity|0015173||IEA;go_process=aromatic amino acid transport|0015801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227728.1;locus_tag=PHA56_RS10030;product=tyrosine transporter TyrP;protein_id=WP_032750415.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2107892 2108131 . + . ID=gene-PHA56_RS10035;Name=PHA56_RS10035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS10035;old_locus_tag=PHA56_10040 NZ_CP116214.1 Protein Homology CDS 2107892 2108131 . + 0 ID=cds-WP_004852186.1;Parent=gene-PHA56_RS10035;Dbxref=Genbank:WP_004852186.1;Name=WP_004852186.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227727.1;locus_tag=PHA56_RS10035;product=YecH family protein;protein_id=WP_004852186.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2108174 2108671 . - . ID=gene-PHA56_RS10040;Name=ftnA;gbkey=Gene;gene=ftnA;gene_biotype=protein_coding;locus_tag=PHA56_RS10040;old_locus_tag=PHA56_10045 NZ_CP116214.1 Protein Homology CDS 2108174 2108671 . - 0 ID=cds-WP_004852185.1;Parent=gene-PHA56_RS10040;Dbxref=Genbank:WP_004852185.1;Name=WP_004852185.1;Ontology_term=GO:0006879,GO:0008199;gbkey=CDS;gene=ftnA;go_function=ferric iron binding|0008199||IEA;go_process=cellular iron ion homeostasis|0006879||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227726.1;locus_tag=PHA56_RS10040;product=non-heme ferritin;protein_id=WP_004852185.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2109095 2109733 . + . ID=gene-PHA56_RS10045;Name=PHA56_RS10045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS10045;old_locus_tag=PHA56_10050 NZ_CP116214.1 Protein Homology CDS 2109095 2109733 . + 0 ID=cds-WP_014229871.1;Parent=gene-PHA56_RS10045;Dbxref=Genbank:WP_014229871.1;Name=WP_014229871.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008804227.1;locus_tag=PHA56_RS10045;product=RpiB/LacA/LacB family sugar-phosphate isomerase;protein_id=WP_014229871.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2109786 2111207 . - . ID=gene-PHA56_RS10050;Name=PHA56_RS10050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS10050;old_locus_tag=PHA56_10055 NZ_CP116214.1 Protein Homology CDS 2109786 2111207 . - 0 ID=cds-WP_032750412.1;Parent=gene-PHA56_RS10050;Dbxref=Genbank:WP_032750412.1;Name=WP_032750412.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227723.1;locus_tag=PHA56_RS10050;product=MFS transporter;protein_id=WP_032750412.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2111415 2111498 . + . ID=gene-PHA56_RS10055;Name=azuC;gbkey=Gene;gene=azuC;gene_biotype=protein_coding;locus_tag=PHA56_RS10055;old_locus_tag=PHA56_10060 NZ_CP116214.1 Protein Homology CDS 2111415 2111498 . + 0 ID=cds-WP_014229869.1;Parent=gene-PHA56_RS10055;Dbxref=Genbank:WP_014229869.1;Name=WP_014229869.1;gbkey=CDS;gene=azuC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791245.1;locus_tag=PHA56_RS10055;product=stress response protein AzuC;protein_id=WP_014229869.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2111578 2111829 . + . ID=gene-PHA56_RS10060;Name=PHA56_RS10060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS10060;old_locus_tag=PHA56_10065 NZ_CP116214.1 Protein Homology CDS 2111578 2111829 . + 0 ID=cds-WP_014229868.1;Parent=gene-PHA56_RS10060;Dbxref=Genbank:WP_014229868.1;Name=WP_014229868.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227722.1;locus_tag=PHA56_RS10060;product=DUF2766 family protein;protein_id=WP_014229868.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2111876 2113387 . - . ID=gene-PHA56_RS10065;Name=PHA56_RS10065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS10065;old_locus_tag=PHA56_10070 NZ_CP116214.1 Protein Homology CDS 2111876 2113387 . - 0 ID=cds-WP_014229867.1;Parent=gene-PHA56_RS10065;Dbxref=Genbank:WP_014229867.1;Name=WP_014229867.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229867.1;locus_tag=PHA56_RS10065;product=MFS transporter;protein_id=WP_014229867.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2113712 2114215 . - . ID=gene-PHA56_RS10070;Name=PHA56_RS10070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS10070;old_locus_tag=PHA56_10075 NZ_CP116214.1 Protein Homology CDS 2113712 2114215 . - 0 ID=cds-WP_032720337.1;Parent=gene-PHA56_RS10070;Dbxref=Genbank:WP_032720337.1;Name=WP_032720337.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004852178.1;locus_tag=PHA56_RS10070;product=non-heme ferritin-like protein;protein_id=WP_032720337.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2114716 2115273 . + . ID=gene-PHA56_RS10075;Name=PHA56_RS10075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS10075;old_locus_tag=PHA56_10080 NZ_CP116214.1 Protein Homology CDS 2114716 2115273 . + 0 ID=cds-WP_032693589.1;Parent=gene-PHA56_RS10075;Dbxref=Genbank:WP_032693589.1;Name=WP_032693589.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003844182.1;locus_tag=PHA56_RS10075;product=DJ-1/PfpI family protein;protein_id=WP_032693589.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2115562 2116542 . + . ID=gene-PHA56_RS10080;Name=PHA56_RS10080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS10080;old_locus_tag=PHA56_10085 NZ_CP116214.1 Protein Homology CDS 2115562 2116542 . + 0 ID=cds-WP_014229864.1;Parent=gene-PHA56_RS10080;Dbxref=Genbank:WP_014229864.1;Name=WP_014229864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227717.1;locus_tag=PHA56_RS10080;product=arabinose ABC transporter substrate-binding protein;protein_id=WP_014229864.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2116604 2118118 . + . ID=gene-PHA56_RS10085;Name=araG;gbkey=Gene;gene=araG;gene_biotype=protein_coding;locus_tag=PHA56_RS10085;old_locus_tag=PHA56_10090 NZ_CP116214.1 Protein Homology CDS 2116604 2118118 . + 0 ID=cds-WP_014229863.1;Parent=gene-PHA56_RS10085;Dbxref=Genbank:WP_014229863.1;Name=WP_014229863.1;Ontology_term=GO:0042882,GO:0005524,GO:0015612,GO:0016020;gbkey=CDS;gene=araG;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type L-arabinose transporter activity|0015612||IEA;go_process=L-arabinose transmembrane transport|0042882||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127704.1;locus_tag=PHA56_RS10085;product=L-arabinose ABC transporter ATP-binding protein AraG;protein_id=WP_014229863.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2118133 2119113 . + . ID=gene-PHA56_RS10090;Name=araH;gbkey=Gene;gene=araH;gene_biotype=protein_coding;locus_tag=PHA56_RS10090;old_locus_tag=PHA56_10095 NZ_CP116214.1 Protein Homology CDS 2118133 2119113 . + 0 ID=cds-WP_004852169.1;Parent=gene-PHA56_RS10090;Dbxref=Genbank:WP_004852169.1;Name=WP_004852169.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=araH;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000100205.1;locus_tag=PHA56_RS10090;product=L-arabinose ABC transporter permease AraH;protein_id=WP_004852169.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2119272 2120075 . + . ID=gene-PHA56_RS10095;Name=otsB;gbkey=Gene;gene=otsB;gene_biotype=protein_coding;locus_tag=PHA56_RS10095;old_locus_tag=PHA56_10100 NZ_CP116214.1 Protein Homology CDS 2119272 2120075 . + 0 ID=cds-WP_014229862.1;Parent=gene-PHA56_RS10095;Dbxref=Genbank:WP_014229862.1;Name=WP_014229862.1;Ontology_term=GO:0005992,GO:0004805;gbkey=CDS;gene=otsB;go_function=trehalose-phosphatase activity|0004805||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227714.1;locus_tag=PHA56_RS10095;product=trehalose-phosphatase;protein_id=WP_014229862.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2120050 2121474 . + . ID=gene-PHA56_RS10100;Name=otsA;gbkey=Gene;gene=otsA;gene_biotype=protein_coding;locus_tag=PHA56_RS10100;old_locus_tag=PHA56_10105 NZ_CP116214.1 Protein Homology CDS 2120050 2121474 . + 0 ID=cds-WP_014229861.1;Parent=gene-PHA56_RS10100;Dbxref=Genbank:WP_014229861.1;Name=WP_014229861.1;Ontology_term=GO:0005992,GO:0003825;gbkey=CDS;gene=otsA;go_function=alpha%2Calpha-trehalose-phosphate synthase (UDP-forming) activity|0003825||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227713.1;locus_tag=PHA56_RS10100;product=alpha%2Calpha-trehalose-phosphate synthase;protein_id=WP_014229861.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2121501 2121929 . - . ID=gene-PHA56_RS10105;Name=uspC;gbkey=Gene;gene=uspC;gene_biotype=protein_coding;locus_tag=PHA56_RS10105;old_locus_tag=PHA56_10110 NZ_CP116214.1 Protein Homology CDS 2121501 2121929 . - 0 ID=cds-WP_004852164.1;Parent=gene-PHA56_RS10105;Dbxref=Genbank:WP_004852164.1;Name=WP_004852164.1;gbkey=CDS;gene=uspC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227712.1;locus_tag=PHA56_RS10105;product=universal stress protein UspC;protein_id=WP_004852164.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2122032 2122217 . - . ID=gene-PHA56_RS10110;Name=PHA56_RS10110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS10110;old_locus_tag=PHA56_10115 NZ_CP116214.1 GeneMarkS-2+ CDS 2122032 2122217 . - 0 ID=cds-WP_157870119.1;Parent=gene-PHA56_RS10110;Dbxref=Genbank:WP_157870119.1;Name=WP_157870119.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PHA56_RS10110;product=hypothetical protein;protein_id=WP_157870119.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2122294 2123877 . + . ID=gene-PHA56_RS10115;Name=PHA56_RS10115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS10115;old_locus_tag=PHA56_10120 NZ_CP116214.1 Protein Homology CDS 2122294 2123877 . + 0 ID=cds-WP_009652039.1;Parent=gene-PHA56_RS10115;Dbxref=Genbank:WP_009652039.1;Name=WP_009652039.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227711.1;locus_tag=PHA56_RS10115;product=MFS transporter;protein_id=WP_009652039.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2123882 2125021 . + . ID=gene-PHA56_RS10120;Name=PHA56_RS10120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS10120;old_locus_tag=PHA56_10125 NZ_CP116214.1 Protein Homology CDS 2123882 2125021 . + 0 ID=cds-WP_014229860.1;Parent=gene-PHA56_RS10120;Dbxref=Genbank:WP_014229860.1;Name=WP_014229860.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227710.1;locus_tag=PHA56_RS10120;product=glycoside hydrolase family 105 protein;protein_id=WP_014229860.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2125142 2126875 . - . ID=gene-PHA56_RS10125;Name=argS;gbkey=Gene;gene=argS;gene_biotype=protein_coding;locus_tag=PHA56_RS10125;old_locus_tag=PHA56_10130 NZ_CP116214.1 Protein Homology CDS 2125142 2126875 . - 0 ID=cds-WP_009652018.1;Parent=gene-PHA56_RS10125;Dbxref=Genbank:WP_009652018.1;Name=WP_009652018.1;Ontology_term=GO:0006420,GO:0004814,GO:0005737;gbkey=CDS;gene=argS;go_component=cytoplasm|0005737||IEA;go_function=arginine-tRNA ligase activity|0004814||IEA;go_process=arginyl-tRNA aminoacylation|0006420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001025321.1;locus_tag=PHA56_RS10125;product=arginine--tRNA ligase;protein_id=WP_009652018.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2127105 2127674 . + . ID=gene-PHA56_RS10130;Name=PHA56_RS10130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS10130;old_locus_tag=PHA56_10135 NZ_CP116214.1 Protein Homology CDS 2127105 2127674 . + 0 ID=cds-WP_014229859.1;Parent=gene-PHA56_RS10130;Dbxref=Genbank:WP_014229859.1;Name=WP_014229859.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004852155.1;locus_tag=PHA56_RS10130;product=VOC family protein;protein_id=WP_014229859.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2127751 2128494 . + . ID=gene-PHA56_RS10135;Name=cutC;gbkey=Gene;gene=cutC;gene_biotype=protein_coding;locus_tag=PHA56_RS10135;old_locus_tag=PHA56_10140 NZ_CP116214.1 Protein Homology CDS 2127751 2128494 . + 0 ID=cds-WP_014229858.1;Parent=gene-PHA56_RS10135;Dbxref=Genbank:WP_014229858.1;Name=WP_014229858.1;Ontology_term=GO:0055070,GO:0005507;gbkey=CDS;gene=cutC;go_function=copper ion binding|0005507||IEA;go_process=copper ion homeostasis|0055070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004122072.1;locus_tag=PHA56_RS10135;product=copper homeostasis protein CutC;protein_id=WP_014229858.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2128718 2129740 . - . ID=gene-PHA56_RS10140;Name=cmoB;gbkey=Gene;gene=cmoB;gene_biotype=protein_coding;locus_tag=PHA56_RS10140;old_locus_tag=PHA56_10145 NZ_CP116214.1 Protein Homology CDS 2128718 2129740 . - 0 ID=cds-WP_004852151.1;Parent=gene-PHA56_RS10140;Dbxref=Genbank:WP_004852151.1;Name=WP_004852151.1;Ontology_term=GO:0002098,GO:0016765;gbkey=CDS;gene=cmoB;go_function=transferase activity%2C transferring alkyl or aryl (other than methyl) groups|0016765||IEA;go_process=tRNA wobble uridine modification|0002098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004103406.1;locus_tag=PHA56_RS10140;product=tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB;protein_id=WP_004852151.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2129737 2130480 . - . ID=gene-PHA56_RS10145;Name=cmoA;gbkey=Gene;gene=cmoA;gene_biotype=protein_coding;locus_tag=PHA56_RS10145;old_locus_tag=PHA56_10150 NZ_CP116214.1 Protein Homology CDS 2129737 2130480 . - 0 ID=cds-WP_009652021.1;Parent=gene-PHA56_RS10145;Dbxref=Genbank:WP_009652021.1;Name=WP_009652021.1;gbkey=CDS;gene=cmoA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227705.1;locus_tag=PHA56_RS10145;product=carboxy-S-adenosyl-L-methionine synthase CmoA;protein_id=WP_009652021.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2130520 2130915 . - . ID=gene-PHA56_RS10150;Name=PHA56_RS10150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS10150;old_locus_tag=PHA56_10155 NZ_CP116214.1 Protein Homology CDS 2130520 2130915 . - 0 ID=cds-WP_032750404.1;Parent=gene-PHA56_RS10150;Dbxref=Genbank:WP_032750404.1;Name=WP_032750404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227704.1;locus_tag=PHA56_RS10150;product=MAPEG family protein;protein_id=WP_032750404.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2130969 2131787 . - . ID=gene-PHA56_RS10155;Name=PHA56_RS10155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS10155;old_locus_tag=PHA56_10160 NZ_CP116214.1 Protein Homology CDS 2130969 2131787 . - 0 ID=cds-WP_014229856.1;Parent=gene-PHA56_RS10155;Dbxref=Genbank:WP_014229856.1;Name=WP_014229856.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227703.1;locus_tag=PHA56_RS10155;product=DUF72 domain-containing protein;protein_id=WP_014229856.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2131784 2132350 . - . ID=gene-PHA56_RS10160;Name=PHA56_RS10160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS10160;old_locus_tag=PHA56_10165 NZ_CP116214.1 Protein Homology CDS 2131784 2132350 . - 0 ID=cds-WP_009652068.1;Parent=gene-PHA56_RS10160;Dbxref=Genbank:WP_009652068.1;Name=WP_009652068.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227702.1;locus_tag=PHA56_RS10160;product=hydrolase;protein_id=WP_009652068.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2132619 2134406 . + . ID=gene-PHA56_RS10165;Name=aspS;gbkey=Gene;gene=aspS;gene_biotype=protein_coding;locus_tag=PHA56_RS10165;old_locus_tag=PHA56_10170 NZ_CP116214.1 Protein Homology CDS 2132619 2134406 . + 0 ID=cds-WP_032750402.1;Parent=gene-PHA56_RS10165;Dbxref=Genbank:WP_032750402.1;Name=WP_032750402.1;Ontology_term=GO:0006422,GO:0004815,GO:0005737;gbkey=CDS;gene=aspS;go_component=cytoplasm|0005737||IEA;go_function=aspartate-tRNA ligase activity|0004815||IEA;go_process=aspartyl-tRNA aminoacylation|0006422||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227701.1;locus_tag=PHA56_RS10165;product=aspartate--tRNA ligase;protein_id=WP_032750402.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2134408 2134851 . + . ID=gene-PHA56_RS10170;Name=nudB;gbkey=Gene;gene=nudB;gene_biotype=protein_coding;locus_tag=PHA56_RS10170;old_locus_tag=PHA56_10175 NZ_CP116214.1 Protein Homology CDS 2134408 2134851 . + 0 ID=cds-WP_004852138.1;Parent=gene-PHA56_RS10170;Dbxref=Genbank:WP_004852138.1;Name=WP_004852138.1;Ontology_term=GO:0046656,GO:0008828,GO:0019177;gbkey=CDS;gene=nudB;go_function=dATP diphosphatase activity|0008828||IEA,dihydroneopterin triphosphate pyrophosphohydrolase activity|0019177||IEA;go_process=folic acid biosynthetic process|0046656||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227700.1;locus_tag=PHA56_RS10170;product=dihydroneopterin triphosphate diphosphatase;protein_id=WP_004852138.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2134882 2135622 . + . ID=gene-PHA56_RS10175;Name=PHA56_RS10175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS10175;old_locus_tag=PHA56_10180 NZ_CP116214.1 Protein Homology CDS 2134882 2135622 . + 0 ID=cds-WP_004122063.1;Parent=gene-PHA56_RS10175;Dbxref=Genbank:WP_004122063.1;Name=WP_004122063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000907250.1;locus_tag=PHA56_RS10175;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=WP_004122063.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2135660 2136181 . + . ID=gene-PHA56_RS10180;Name=ruvC;gbkey=Gene;gene=ruvC;gene_biotype=protein_coding;locus_tag=PHA56_RS10180;old_locus_tag=PHA56_10185 NZ_CP116214.1 Protein Homology CDS 2135660 2136181 . + 0 ID=cds-WP_014229855.1;Parent=gene-PHA56_RS10180;Dbxref=Genbank:WP_014229855.1;Name=WP_014229855.1;Ontology_term=GO:0006310,GO:0008821;gbkey=CDS;gene=ruvC;go_function=crossover junction endodeoxyribonuclease activity|0008821||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005068993.1;locus_tag=PHA56_RS10180;product=crossover junction endodeoxyribonuclease RuvC;protein_id=WP_014229855.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2136263 2136874 . + . ID=gene-PHA56_RS10185;Name=ruvA;gbkey=Gene;gene=ruvA;gene_biotype=protein_coding;locus_tag=PHA56_RS10185;old_locus_tag=PHA56_10190 NZ_CP116214.1 Protein Homology CDS 2136263 2136874 . + 0 ID=cds-WP_004103390.1;Parent=gene-PHA56_RS10185;Dbxref=Genbank:WP_004103390.1;Name=WP_004103390.1;Ontology_term=GO:0006310,GO:0009378,GO:0009379;gbkey=CDS;gene=ruvA;go_component=Holliday junction helicase complex|0009379||IEA;go_function=four-way junction helicase activity|0009378||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012131997.1;locus_tag=PHA56_RS10185;product=Holliday junction branch migration protein RuvA;protein_id=WP_004103390.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2136883 2137893 . + . ID=gene-PHA56_RS10190;Name=ruvB;gbkey=Gene;gene=ruvB;gene_biotype=protein_coding;locus_tag=PHA56_RS10190;old_locus_tag=PHA56_10195 NZ_CP116214.1 Protein Homology CDS 2136883 2137893 . + 0 ID=cds-WP_004852130.1;Parent=gene-PHA56_RS10190;Dbxref=Genbank:WP_004852130.1;Name=WP_004852130.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0005524,GO:0009378;gbkey=CDS;gene=ruvB;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227696.1;locus_tag=PHA56_RS10190;product=Holliday junction branch migration DNA helicase RuvB;protein_id=WP_004852130.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2138102 2138887 . - . ID=gene-PHA56_RS10195;Name=znuB;gbkey=Gene;gene=znuB;gene_biotype=protein_coding;locus_tag=PHA56_RS10195;old_locus_tag=PHA56_10200 NZ_CP116214.1 Protein Homology CDS 2138102 2138887 . - 0 ID=cds-WP_014229854.1;Parent=gene-PHA56_RS10195;Dbxref=Genbank:WP_014229854.1;Name=WP_014229854.1;Ontology_term=GO:0055085,GO:0042626;gbkey=CDS;gene=znuB;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460850.1;locus_tag=PHA56_RS10195;product=zinc ABC transporter permease subunit ZnuB;protein_id=WP_014229854.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2138887 2139639 . - . ID=gene-PHA56_RS10200;Name=znuC;gbkey=Gene;gene=znuC;gene_biotype=protein_coding;locus_tag=PHA56_RS10200;old_locus_tag=PHA56_10205 NZ_CP116214.1 Protein Homology CDS 2138887 2139639 . - 0 ID=cds-WP_271292968.1;Parent=gene-PHA56_RS10200;Dbxref=Genbank:WP_271292968.1;Name=WP_271292968.1;Ontology_term=GO:0006829,GO:0005524,GO:0015633;gbkey=CDS;gene=znuC;go_function=ATP binding|0005524||IEA,ABC-type zinc transporter activity|0015633||IEA;go_process=zinc ion transport|0006829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004203406.1;locus_tag=PHA56_RS10200;product=zinc ABC transporter ATP-binding protein ZnuC;protein_id=WP_271292968.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2139718 2140662 . + . ID=gene-PHA56_RS10205;Name=znuA;gbkey=Gene;gene=znuA;gene_biotype=protein_coding;locus_tag=PHA56_RS10205;old_locus_tag=PHA56_10210 NZ_CP116214.1 Protein Homology CDS 2139718 2140662 . + 0 ID=cds-WP_004852123.1;Parent=gene-PHA56_RS10205;Dbxref=Genbank:WP_004852123.1;Name=WP_004852123.1;Ontology_term=GO:0006829,GO:0046872;gbkey=CDS;gene=znuA;go_function=metal ion binding|0046872||IEA;go_process=zinc ion transport|0006829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227693.1;locus_tag=PHA56_RS10205;product=zinc ABC transporter substrate-binding protein ZnuA;protein_id=WP_004852123.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2140678 2142000 . + . ID=gene-PHA56_RS10210;Name=mepM;gbkey=Gene;gene=mepM;gene_biotype=protein_coding;locus_tag=PHA56_RS10210;old_locus_tag=PHA56_10215 NZ_CP116214.1 Protein Homology CDS 2140678 2142000 . + 0 ID=cds-WP_032750396.1;Parent=gene-PHA56_RS10210;Dbxref=Genbank:WP_032750396.1;Name=WP_032750396.1;Ontology_term=GO:0042834;gbkey=CDS;gene=mepM;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227692.1;locus_tag=PHA56_RS10210;product=murein DD-endopeptidase MepM;protein_id=WP_032750396.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2142118 2143104 . + . ID=gene-PHA56_RS10215;Name=lpxM;gbkey=Gene;gene=lpxM;gene_biotype=protein_coding;gene_synonym=msbB;locus_tag=PHA56_RS10215;old_locus_tag=PHA56_10220 NZ_CP116214.1 Protein Homology CDS 2142118 2143104 . + 0 ID=cds-WP_014229850.1;Parent=gene-PHA56_RS10215;Dbxref=Genbank:WP_014229850.1;Name=WP_014229850.1;Note=LpxM is lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase%2C an enzyme characterized in Escherichia coli and involved in biosynthesis of the form of lipid A found in that species and some closely related species.;Ontology_term=GO:0009245,GO:0016746;gbkey=CDS;gene=lpxM;go_function=acyltransferase activity|0016746||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229850.1;locus_tag=PHA56_RS10215;product=lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase;protein_id=WP_014229850.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2143132 2143848 . - . ID=gene-PHA56_RS10220;Name=dcuR;gbkey=Gene;gene=dcuR;gene_biotype=protein_coding;locus_tag=PHA56_RS10220;old_locus_tag=PHA56_10225 NZ_CP116214.1 Protein Homology CDS 2143132 2143848 . - 0 ID=cds-WP_014229849.1;Parent=gene-PHA56_RS10220;Dbxref=Genbank:WP_014229849.1;Name=WP_014229849.1;Ontology_term=GO:0000160,GO:0003700;gbkey=CDS;gene=dcuR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009654714.1;locus_tag=PHA56_RS10220;product=two-component system response regulator DcuR;protein_id=WP_014229849.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2143912 2145597 . - . ID=gene-PHA56_RS10225;Name=PHA56_RS10225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS10225;old_locus_tag=PHA56_10230 NZ_CP116214.1 Protein Homology CDS 2143912 2145597 . - 0 ID=cds-WP_014838826.1;Parent=gene-PHA56_RS10225;Dbxref=Genbank:WP_014838826.1;Name=WP_014838826.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014838826.1;locus_tag=PHA56_RS10225;product=NAD-dependent malic enzyme;protein_id=WP_014838826.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2145660 2146607 . - . ID=gene-PHA56_RS10230;Name=PHA56_RS10230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS10230;old_locus_tag=PHA56_10235 NZ_CP116214.1 Protein Homology CDS 2145660 2146607 . - 0 ID=cds-WP_032694924.1;Parent=gene-PHA56_RS10230;Dbxref=Genbank:WP_032694924.1;Name=WP_032694924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004203397.1;locus_tag=PHA56_RS10230;product=AEC family transporter;protein_id=WP_032694924.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2147023 2148357 . + . ID=gene-PHA56_RS10235;Name=PHA56_RS10235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS10235;old_locus_tag=PHA56_10240 NZ_CP116214.1 Protein Homology CDS 2147023 2148357 . + 0 ID=cds-WP_014229846.1;Parent=gene-PHA56_RS10235;Dbxref=Genbank:WP_014229846.1;Name=WP_014229846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009651968.1;locus_tag=PHA56_RS10235;product=2-hydroxycarboxylate transporter family protein;protein_id=WP_014229846.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2148422 2149864 . - . ID=gene-PHA56_RS10240;Name=pyk;gbkey=Gene;gene=pyk;gene_biotype=protein_coding;locus_tag=PHA56_RS10240;old_locus_tag=PHA56_10245 NZ_CP116214.1 Protein Homology CDS 2148422 2149864 . - 0 ID=cds-WP_014229845.1;Parent=gene-PHA56_RS10240;Dbxref=Genbank:WP_014229845.1;Name=WP_014229845.1;Ontology_term=GO:0006096,GO:0004743,GO:0005737;gbkey=CDS;gene=pyk;go_component=cytoplasm|0005737||IEA;go_function=pyruvate kinase activity|0004743||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120709.1;locus_tag=PHA56_RS10240;product=pyruvate kinase;protein_id=WP_014229845.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2149990 2150895 . - . ID=gene-PHA56_RS10245;Name=PHA56_RS10245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS10245;old_locus_tag=PHA56_10250 NZ_CP116214.1 Protein Homology CDS 2149990 2150895 . - 0 ID=cds-WP_161505349.1;Parent=gene-PHA56_RS10245;Dbxref=Genbank:WP_161505349.1;Name=WP_161505349.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227689.1;locus_tag=PHA56_RS10245;product=MurR/RpiR family transcriptional regulator;protein_id=WP_161505349.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2151221 2152696 . + . ID=gene-PHA56_RS10250;Name=zwf;gbkey=Gene;gene=zwf;gene_biotype=protein_coding;locus_tag=PHA56_RS10250;old_locus_tag=PHA56_10255 NZ_CP116214.1 Protein Homology CDS 2151221 2152696 . + 0 ID=cds-WP_004122041.1;Parent=gene-PHA56_RS10250;Dbxref=Genbank:WP_004122041.1;Name=WP_004122041.1;Ontology_term=GO:0006098,GO:0004345;gbkey=CDS;gene=zwf;go_function=glucose-6-phosphate dehydrogenase activity|0004345||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120712.1;locus_tag=PHA56_RS10250;product=glucose-6-phosphate dehydrogenase;protein_id=WP_004122041.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2152917 2154728 . + . ID=gene-PHA56_RS10255;Name=edd;gbkey=Gene;gene=edd;gene_biotype=protein_coding;locus_tag=PHA56_RS10255;old_locus_tag=PHA56_10260 NZ_CP116214.1 Protein Homology CDS 2152917 2154728 . + 0 ID=cds-WP_025106126.1;Parent=gene-PHA56_RS10255;Dbxref=Genbank:WP_025106126.1;Name=WP_025106126.1;Ontology_term=GO:0009255,GO:0004456;gbkey=CDS;gene=edd;go_function=phosphogluconate dehydratase activity|0004456||IEA;go_process=Entner-Doudoroff pathway through 6-phosphogluconate|0009255||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460842.1;locus_tag=PHA56_RS10255;product=phosphogluconate dehydratase;protein_id=WP_025106126.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2154766 2155407 . + . ID=gene-PHA56_RS10260;Name=PHA56_RS10260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS10260;old_locus_tag=PHA56_10265 NZ_CP116214.1 Protein Homology CDS 2154766 2155407 . + 0 ID=cds-WP_004103368.1;Parent=gene-PHA56_RS10260;Dbxref=Genbank:WP_004103368.1;Name=WP_004103368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227683.1;locus_tag=PHA56_RS10260;product=bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase;protein_id=WP_004103368.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2155452 2156630 . - . ID=gene-PHA56_RS10265;Name=purT;gbkey=Gene;gene=purT;gene_biotype=protein_coding;locus_tag=PHA56_RS10265;old_locus_tag=PHA56_10270 NZ_CP116214.1 Protein Homology CDS 2155452 2156630 . - 0 ID=cds-WP_032694922.1;Parent=gene-PHA56_RS10265;Dbxref=Genbank:WP_032694922.1;Name=WP_032694922.1;Ontology_term=GO:0009152,GO:0000287,GO:0004644,GO:0005524;gbkey=CDS;gene=purT;go_function=magnesium ion binding|0000287||IEA,phosphoribosylglycinamide formyltransferase activity|0004644||IEA,ATP binding|0005524||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227682.1;locus_tag=PHA56_RS10265;product=formate-dependent phosphoribosylglycinamide formyltransferase;protein_id=WP_032694922.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2156766 2157125 . + . ID=gene-PHA56_RS10270;Name=PHA56_RS10270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS10270;old_locus_tag=PHA56_10275 NZ_CP116214.1 Protein Homology CDS 2156766 2157125 . + 0 ID=cds-WP_014229842.1;Parent=gene-PHA56_RS10270;Dbxref=Genbank:WP_014229842.1;Name=WP_014229842.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002911410.1;locus_tag=PHA56_RS10270;product=YebG family protein;protein_id=WP_014229842.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2157270 2157950 . + . ID=gene-PHA56_RS10275;Name=PHA56_RS10275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS10275;old_locus_tag=PHA56_10280 NZ_CP116214.1 Protein Homology CDS 2157270 2157950 . + 0 ID=cds-WP_032750391.1;Parent=gene-PHA56_RS10275;Dbxref=Genbank:WP_032750391.1;Name=WP_032750391.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227680.1;locus_tag=PHA56_RS10275;product=DUF533 domain-containing protein;protein_id=WP_032750391.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2158084 2160144 . + . ID=gene-PHA56_RS10280;Name=ptrB;gbkey=Gene;gene=ptrB;gene_biotype=protein_coding;locus_tag=PHA56_RS10280;old_locus_tag=PHA56_10285 NZ_CP116214.1 Protein Homology CDS 2158084 2160144 . + 0 ID=cds-WP_014229840.1;Parent=gene-PHA56_RS10280;Dbxref=Genbank:WP_014229840.1;Name=WP_014229840.1;gbkey=CDS;gene=ptrB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008804266.1;locus_tag=PHA56_RS10280;product=oligopeptidase B;protein_id=WP_014229840.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2160151 2160810 . - . ID=gene-PHA56_RS10285;Name=exoX;gbkey=Gene;gene=exoX;gene_biotype=protein_coding;locus_tag=PHA56_RS10285;old_locus_tag=PHA56_10290 NZ_CP116214.1 Protein Homology CDS 2160151 2160810 . - 0 ID=cds-WP_014229839.1;Parent=gene-PHA56_RS10285;Dbxref=Genbank:WP_014229839.1;Name=WP_014229839.1;gbkey=CDS;gene=exoX;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227677.1;locus_tag=PHA56_RS10285;product=exodeoxyribonuclease X;protein_id=WP_014229839.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2160889 2161119 . - . ID=gene-PHA56_RS10290;Name=PHA56_RS10290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS10290;old_locus_tag=PHA56_10295 NZ_CP116214.1 Protein Homology CDS 2160889 2161119 . - 0 ID=cds-WP_004103351.1;Parent=gene-PHA56_RS10290;Dbxref=Genbank:WP_004103351.1;Name=WP_004103351.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227676.1;locus_tag=PHA56_RS10290;product=DNA polymerase III subunit theta;protein_id=WP_004103351.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2161255 2161629 . + . ID=gene-PHA56_RS10295;Name=yobA;gbkey=Gene;gene=yobA;gene_biotype=protein_coding;locus_tag=PHA56_RS10295;old_locus_tag=PHA56_10300 NZ_CP116214.1 Protein Homology CDS 2161255 2161629 . + 0 ID=cds-WP_014229838.1;Parent=gene-PHA56_RS10295;Dbxref=Genbank:WP_014229838.1;Name=WP_014229838.1;Ontology_term=GO:0006825,GO:0005507;gbkey=CDS;gene=yobA;go_function=copper ion binding|0005507||IEA;go_process=copper ion transport|0006825||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016529032.1;locus_tag=PHA56_RS10295;product=CopC domain-containing protein YobA;protein_id=WP_014229838.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2161634 2162503 . + . ID=gene-PHA56_RS10300;Name=copD;gbkey=Gene;gene=copD;gene_biotype=protein_coding;locus_tag=PHA56_RS10300;old_locus_tag=PHA56_10305 NZ_CP116214.1 Protein Homology CDS 2161634 2162503 . + 0 ID=cds-WP_038424672.1;Parent=gene-PHA56_RS10300;Dbxref=Genbank:WP_038424672.1;Name=WP_038424672.1;Ontology_term=GO:0006825,GO:0016020;gbkey=CDS;gene=copD;go_component=membrane|0016020||IEA;go_process=copper ion transport|0006825||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227674.1;locus_tag=PHA56_RS10300;product=copper homeostasis membrane protein CopD;protein_id=WP_038424672.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2162520 2162858 . + . ID=gene-PHA56_RS10305;Name=PHA56_RS10305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS10305;old_locus_tag=PHA56_10310 NZ_CP116214.1 Protein Homology CDS 2162520 2162858 . + 0 ID=cds-WP_004103344.1;Parent=gene-PHA56_RS10305;Dbxref=Genbank:WP_004103344.1;Name=WP_004103344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227673.1;locus_tag=PHA56_RS10305;product=YebY family protein;protein_id=WP_004103344.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2163243 2164202 . - . ID=gene-PHA56_RS10310;Name=PHA56_RS10310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS10310;old_locus_tag=PHA56_10315 NZ_CP116214.1 Protein Homology CDS 2163243 2164202 . - 0 ID=cds-WP_025106131.1;Parent=gene-PHA56_RS10310;Dbxref=Genbank:WP_025106131.1;Name=WP_025106131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004852084.1;locus_tag=PHA56_RS10310;product=spore coat protein U domain-containing protein;protein_id=WP_025106131.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2164217 2166547 . - . ID=gene-PHA56_RS10315;Name=PHA56_RS10315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS10315;old_locus_tag=PHA56_10320 NZ_CP116214.1 Protein Homology CDS 2164217 2166547 . - 0 ID=cds-WP_076752314.1;Parent=gene-PHA56_RS10315;Dbxref=Genbank:WP_076752314.1;Name=WP_076752314.1;Ontology_term=GO:0009297,GO:0015473,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004852083.1;locus_tag=PHA56_RS10315;product=fimbria/pilus outer membrane usher protein;protein_id=WP_076752314.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2166550 2167314 . - . ID=gene-PHA56_RS10320;Name=PHA56_RS10320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS10320;old_locus_tag=PHA56_10325 NZ_CP116214.1 Protein Homology CDS 2166550 2167314 . - 0 ID=cds-WP_042945473.1;Parent=gene-PHA56_RS10320;Dbxref=Genbank:WP_042945473.1;Name=WP_042945473.1;Ontology_term=GO:0071555,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004122023.1;locus_tag=PHA56_RS10320;product=fimbria/pilus periplasmic chaperone;protein_id=WP_042945473.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2167333 2167851 . - . ID=gene-PHA56_RS10325;Name=PHA56_RS10325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS10325;old_locus_tag=PHA56_10330 NZ_CP116214.1 Protein Homology CDS 2167333 2167851 . - 0 ID=cds-WP_004852079.1;Parent=gene-PHA56_RS10325;Dbxref=Genbank:WP_004852079.1;Name=WP_004852079.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004103337.1;locus_tag=PHA56_RS10325;product=spore coat U domain-containing protein;protein_id=WP_004852079.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2167874 2168425 . - . ID=gene-PHA56_RS10330;Name=PHA56_RS10330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS10330;old_locus_tag=PHA56_10335 NZ_CP116214.1 Protein Homology CDS 2167874 2168425 . - 0 ID=cds-WP_076752313.1;Parent=gene-PHA56_RS10330;Dbxref=Genbank:WP_076752313.1;Name=WP_076752313.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017145644.1;locus_tag=PHA56_RS10330;product=spore coat U domain-containing protein;protein_id=WP_076752313.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2169005 2169148 . - . ID=gene-PHA56_RS10335;Name=PHA56_RS10335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS10335;old_locus_tag=PHA56_10340 NZ_CP116214.1 Protein Homology CDS 2169005 2169148 . - 0 ID=cds-WP_009651986.1;Parent=gene-PHA56_RS10335;Dbxref=Genbank:WP_009651986.1;Name=WP_009651986.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002911398.1;locus_tag=PHA56_RS10335;product=Ecr family regulatory small membrane protein;protein_id=WP_009651986.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2169260 2170204 . - . ID=gene-PHA56_RS10340;Name=PHA56_RS10340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS10340;old_locus_tag=PHA56_10345 NZ_CP116214.1 Protein Homology CDS 2169260 2170204 . - 0 ID=cds-WP_004852075.1;Parent=gene-PHA56_RS10340;Dbxref=Genbank:WP_004852075.1;Name=WP_004852075.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004852075.1;locus_tag=PHA56_RS10340;product=VirK/YbjX family protein;protein_id=WP_004852075.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2170369 2171022 . + . ID=gene-PHA56_RS10345;Name=pphA;gbkey=Gene;gene=pphA;gene_biotype=protein_coding;locus_tag=PHA56_RS10345;old_locus_tag=PHA56_10350 NZ_CP116214.1 Protein Homology CDS 2170369 2171022 . + 0 ID=cds-WP_076752312.1;Parent=gene-PHA56_RS10345;Dbxref=Genbank:WP_076752312.1;Name=WP_076752312.1;Ontology_term=GO:0016787;gbkey=CDS;gene=pphA;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009484457.1;locus_tag=PHA56_RS10345;product=protein-serine/threonine phosphatase;protein_id=WP_076752312.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2171019 2171210 . - . ID=gene-PHA56_RS10350;Name=PHA56_RS10350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS10350;old_locus_tag=PHA56_10355 NZ_CP116214.1 Protein Homology CDS 2171019 2171210 . - 0 ID=cds-WP_004122014.1;Parent=gene-PHA56_RS10350;Dbxref=Genbank:WP_004122014.1;Name=WP_004122014.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227669.1;locus_tag=PHA56_RS10350;product=YebW family protein;protein_id=WP_004122014.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2171308 2171547 . - . ID=gene-PHA56_RS10355;Name=PHA56_RS10355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS10355;old_locus_tag=PHA56_10360 NZ_CP116214.1 Protein Homology CDS 2171308 2171547 . - 0 ID=cds-WP_004852069.1;Parent=gene-PHA56_RS10355;Dbxref=Genbank:WP_004852069.1;Name=WP_004852069.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015705939.1;locus_tag=PHA56_RS10355;product=YebV family protein;protein_id=WP_004852069.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2171663 2173096 . - . ID=gene-PHA56_RS10360;Name=rsmF;gbkey=Gene;gene=rsmF;gene_biotype=protein_coding;locus_tag=PHA56_RS10360;old_locus_tag=PHA56_10365 NZ_CP116214.1 Protein Homology CDS 2171663 2173096 . - 0 ID=cds-WP_014229828.1;Parent=gene-PHA56_RS10360;Dbxref=Genbank:WP_014229828.1;Name=WP_014229828.1;Ontology_term=GO:0001510,GO:0003723,GO:0008649;gbkey=CDS;gene=rsmF;go_function=RNA binding|0003723||IEA,rRNA methyltransferase activity|0008649||IEA;go_process=RNA methylation|0001510||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004134839.1;locus_tag=PHA56_RS10360;product=16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF;protein_id=WP_014229828.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2173175 2175808 . - . ID=gene-PHA56_RS10365;Name=PHA56_RS10365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS10365;old_locus_tag=PHA56_10370 NZ_CP116214.1 Protein Homology CDS 2173175 2175808 . - 0 ID=cds-WP_014229827.1;Parent=gene-PHA56_RS10365;Dbxref=Genbank:WP_014229827.1;Name=WP_014229827.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227666.1;locus_tag=PHA56_RS10365;product=PqiB family protein;protein_id=WP_014229827.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2175777 2177060 . - . ID=gene-PHA56_RS10370;Name=yebS;gbkey=Gene;gene=yebS;gene_biotype=protein_coding;locus_tag=PHA56_RS10370;old_locus_tag=PHA56_10375 NZ_CP116214.1 Protein Homology CDS 2175777 2177060 . - 0 ID=cds-WP_014229826.1;Parent=gene-PHA56_RS10370;Dbxref=Genbank:WP_014229826.1;Name=WP_014229826.1;gbkey=CDS;gene=yebS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227665.1;locus_tag=PHA56_RS10370;product=membrane integrity lipid transport subunit YebS;protein_id=WP_014229826.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2177193 2177690 . + . ID=gene-PHA56_RS10375;Name=PHA56_RS10375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS10375;old_locus_tag=PHA56_10380 NZ_CP116214.1 Protein Homology CDS 2177193 2177690 . + 0 ID=cds-WP_014229825.1;Parent=gene-PHA56_RS10375;Dbxref=Genbank:WP_014229825.1;Name=WP_014229825.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707287.1;locus_tag=PHA56_RS10375;product=GAF domain-containing protein;protein_id=WP_014229825.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2177788 2178471 . + . ID=gene-PHA56_RS10380;Name=proQ;gbkey=Gene;gene=proQ;gene_biotype=protein_coding;locus_tag=PHA56_RS10380;old_locus_tag=PHA56_10385 NZ_CP116214.1 Protein Homology CDS 2177788 2178471 . + 0 ID=cds-WP_004852059.1;Parent=gene-PHA56_RS10380;Dbxref=Genbank:WP_004852059.1;Name=WP_004852059.1;Ontology_term=GO:0010608,GO:0003723,GO:0033592,GO:0034057;gbkey=CDS;gene=proQ;go_function=RNA binding|0003723||IEA,RNA strand annealing activity|0033592||IEA,RNA strand-exchange activity|0034057||IEA;go_process=post-transcriptional regulation of gene expression|0010608||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227663.1;locus_tag=PHA56_RS10380;product=RNA chaperone ProQ;protein_id=WP_004852059.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2178491 2180539 . + . ID=gene-PHA56_RS10385;Name=prc;gbkey=Gene;gene=prc;gene_biotype=protein_coding;locus_tag=PHA56_RS10385;old_locus_tag=PHA56_10390 NZ_CP116214.1 Protein Homology CDS 2178491 2180539 . + 0 ID=cds-WP_014229824.1;Parent=gene-PHA56_RS10385;Dbxref=Genbank:WP_014229824.1;Name=WP_014229824.1;Ontology_term=GO:0006508,GO:0005515,GO:0008236;gbkey=CDS;gene=prc;go_function=protein binding|0005515||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227662.1;locus_tag=PHA56_RS10385;product=carboxy terminal-processing peptidase;protein_id=WP_014229824.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2180777 2181658 . + . ID=gene-PHA56_RS10390;Name=htpX;gbkey=Gene;gene=htpX;gene_biotype=protein_coding;locus_tag=PHA56_RS10390;old_locus_tag=PHA56_10395 NZ_CP116214.1 Protein Homology CDS 2180777 2181658 . + 0 ID=cds-WP_014229823.1;Parent=gene-PHA56_RS10390;Dbxref=Genbank:WP_014229823.1;Name=WP_014229823.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=htpX;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229823.1;locus_tag=PHA56_RS10390;product=protease HtpX;protein_id=WP_014229823.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2181730 2183103 . - . ID=gene-PHA56_RS10395;Name=PHA56_RS10395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS10395;old_locus_tag=PHA56_10400 NZ_CP116214.1 Protein Homology CDS 2181730 2183103 . - 0 ID=cds-WP_189087221.1;Parent=gene-PHA56_RS10395;Dbxref=Genbank:WP_189087221.1;Name=WP_189087221.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004122002.1;locus_tag=PHA56_RS10395;product=MFS transporter;protein_id=WP_189087221.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2183281 2184072 . + . ID=gene-PHA56_RS10400;Name=kdgR;gbkey=Gene;gene=kdgR;gene_biotype=protein_coding;locus_tag=PHA56_RS10400;old_locus_tag=PHA56_10405 NZ_CP116214.1 Protein Homology CDS 2183281 2184072 . + 0 ID=cds-WP_014229821.1;Parent=gene-PHA56_RS10400;Dbxref=Genbank:WP_014229821.1;Name=WP_014229821.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=kdgR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227659.1;locus_tag=PHA56_RS10400;product=DNA-binding transcriptional regulator KdgR;protein_id=WP_014229821.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2184117 2184356 . - . ID=gene-PHA56_RS10405;Name=PHA56_RS10405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS10405;old_locus_tag=PHA56_10410 NZ_CP116214.1 Protein Homology CDS 2184117 2184356 . - 0 ID=cds-WP_004122000.1;Parent=gene-PHA56_RS10405;Dbxref=Genbank:WP_004122000.1;Name=WP_004122000.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227658.1;locus_tag=PHA56_RS10405;product=YobH family protein;protein_id=WP_004122000.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2184516 2184659 . + . ID=gene-PHA56_RS10410;Name=mgrB;gbkey=Gene;gene=mgrB;gene_biotype=protein_coding;locus_tag=PHA56_RS10410;old_locus_tag=PHA56_10415 NZ_CP116214.1 Protein Homology CDS 2184516 2184659 . + 0 ID=cds-WP_002911375.1;Parent=gene-PHA56_RS10410;Dbxref=Genbank:WP_002911375.1;Name=WP_002911375.1;gbkey=CDS;gene=mgrB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015366032.1;locus_tag=PHA56_RS10410;product=PhoP/PhoQ regulator MgrB;protein_id=WP_002911375.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2184734 2185024 . + . ID=gene-PHA56_RS10415;Name=PHA56_RS10415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS10415;old_locus_tag=PHA56_10420 NZ_CP116214.1 Protein Homology CDS 2184734 2185024 . + 0 ID=cds-WP_004103312.1;Parent=gene-PHA56_RS10415;Dbxref=Genbank:WP_004103312.1;Name=WP_004103312.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227656.1;locus_tag=PHA56_RS10415;product=YebO family protein;protein_id=WP_004103312.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2185635 2185751 . + . ID=gene-PHA56_RS10420;Name=PHA56_RS10420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS10420;old_locus_tag=PHA56_10425 NZ_CP116214.1 Protein Homology CDS 2185635 2185751 . + 0 ID=cds-WP_004134862.1;Parent=gene-PHA56_RS10420;Dbxref=Genbank:WP_004134862.1;Name=WP_004134862.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416338.1;locus_tag=PHA56_RS10420;product=DUF2627 domain-containing protein;protein_id=WP_004134862.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2185793 2186002 . + . ID=gene-PHA56_RS10425;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=PHA56_RS10425;old_locus_tag=PHA56_10430 NZ_CP116214.1 Protein Homology CDS 2185793 2186002 . + 0 ID=cds-WP_001062678.1;Parent=gene-PHA56_RS10425;Dbxref=Genbank:WP_001062678.1;Name=WP_001062678.1;gbkey=CDS;gene=cspE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310560.1;locus_tag=PHA56_RS10425;product=transcription antiterminator/RNA stability regulator CspE;protein_id=WP_001062678.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2186192 2187937 . + . ID=gene-PHA56_RS10430;Name=ftsI;gbkey=Gene;gene=ftsI;gene_biotype=protein_coding;locus_tag=PHA56_RS10430;old_locus_tag=PHA56_10435 NZ_CP116214.1 Protein Homology CDS 2186192 2187937 . + 0 ID=cds-WP_014229820.1;Parent=gene-PHA56_RS10430;Dbxref=Genbank:WP_014229820.1;Name=WP_014229820.1;Ontology_term=GO:0009252,GO:0051301,GO:0008658,GO:0008955,GO:0005886;gbkey=CDS;gene=ftsI;go_component=plasma membrane|0005886||IEA;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229820.1;locus_tag=PHA56_RS10430;product=peptidoglycan glycosyltransferase FtsI;protein_id=WP_014229820.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2187998 2188792 . + . ID=gene-PHA56_RS10435;Name=rlmA;gbkey=Gene;gene=rlmA;gene_biotype=protein_coding;locus_tag=PHA56_RS10435;old_locus_tag=PHA56_10440 NZ_CP116214.1 Protein Homology CDS 2187998 2188792 . + 0 ID=cds-WP_014229819.1;Parent=gene-PHA56_RS10435;Dbxref=Genbank:WP_014229819.1;Name=WP_014229819.1;Ontology_term=GO:0008168;gbkey=CDS;gene=rlmA;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227652.1;locus_tag=PHA56_RS10435;product=23S rRNA (guanine(745)-N(1))-methyltransferase;protein_id=WP_014229819.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2188796 2189362 . - . ID=gene-PHA56_RS10440;Name=mntP;gbkey=Gene;gene=mntP;gene_biotype=protein_coding;locus_tag=PHA56_RS10440;old_locus_tag=PHA56_10445 NZ_CP116214.1 Protein Homology CDS 2188796 2189362 . - 0 ID=cds-WP_119834536.1;Parent=gene-PHA56_RS10440;Dbxref=Genbank:WP_119834536.1;Name=WP_119834536.1;gbkey=CDS;gene=mntP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227651.1;locus_tag=PHA56_RS10440;product=manganese efflux pump MntP;protein_id=WP_119834536.1;transl_table=11 NZ_CP116214.1 cmsearch riboswitch 2189434 2189588 . - . ID=id-NZ_CP116214.1:2189434..2189588;Dbxref=RFAM:RF00080;Note=yybP-ykoY riboswitch is a manganese riboswitch that directly binds Mn;bound_moiety=manganese;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NZ_CP116214.1 RefSeq gene 2189787 2190245 . - . ID=gene-PHA56_RS10445;Name=PHA56_RS10445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS10445;old_locus_tag=PHA56_10450 NZ_CP116214.1 Protein Homology CDS 2189787 2190245 . - 0 ID=cds-WP_004852044.1;Parent=gene-PHA56_RS10445;Dbxref=Genbank:WP_004852044.1;Name=WP_004852044.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227650.1;locus_tag=PHA56_RS10445;product=DUF986 family protein;protein_id=WP_004852044.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2190299 2191150 . - . ID=gene-PHA56_RS10450;Name=PHA56_RS10450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS10450;old_locus_tag=PHA56_10455 NZ_CP116214.1 Protein Homology CDS 2190299 2191150 . - 0 ID=cds-WP_004103307.1;Parent=gene-PHA56_RS10450;Dbxref=Genbank:WP_004103307.1;Name=WP_004103307.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000228151.1;locus_tag=PHA56_RS10450;product=PTS mannose transporter subunit IID;protein_id=WP_004103307.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2191163 2191963 . - . ID=gene-PHA56_RS10455;Name=manY;gbkey=Gene;gene=manY;gene_biotype=protein_coding;locus_tag=PHA56_RS10455;old_locus_tag=PHA56_10460 NZ_CP116214.1 Protein Homology CDS 2191163 2191963 . - 0 ID=cds-WP_004103305.1;Parent=gene-PHA56_RS10455;Dbxref=Genbank:WP_004103305.1;Name=WP_004103305.1;gbkey=CDS;gene=manY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910918.1;locus_tag=PHA56_RS10455;product=PTS mannose transporter subunit IIC;protein_id=WP_004103305.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2192024 2192992 . - . ID=gene-PHA56_RS10460;Name=manX;gbkey=Gene;gene=manX;gene_biotype=protein_coding;locus_tag=PHA56_RS10460;old_locus_tag=PHA56_10465 NZ_CP116214.1 Protein Homology CDS 2192024 2192992 . - 0 ID=cds-WP_004103303.1;Parent=gene-PHA56_RS10460;Dbxref=Genbank:WP_004103303.1;Name=WP_004103303.1;Ontology_term=GO:0009401,GO:0008982;gbkey=CDS;gene=manX;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003841624.1;locus_tag=PHA56_RS10460;product=PTS mannose transporter subunit IIAB;protein_id=WP_004103303.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2193439 2194998 . + . ID=gene-PHA56_RS10465;Name=yoaE;gbkey=Gene;gene=yoaE;gene_biotype=protein_coding;locus_tag=PHA56_RS10465;old_locus_tag=PHA56_10470 NZ_CP116214.1 Protein Homology CDS 2193439 2194998 . + 0 ID=cds-WP_004852040.1;Parent=gene-PHA56_RS10465;Dbxref=Genbank:WP_004852040.1;Name=WP_004852040.1;gbkey=CDS;gene=yoaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310552.1;locus_tag=PHA56_RS10465;product=CNNM family cation transport protein YoaE;protein_id=WP_004852040.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2195037 2196602 . - . ID=gene-PHA56_RS10470;Name=PHA56_RS10470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS10470;old_locus_tag=PHA56_10475 NZ_CP116214.1 Protein Homology CDS 2195037 2196602 . - 0 ID=cds-WP_076752311.1;Parent=gene-PHA56_RS10470;Dbxref=Genbank:WP_076752311.1;Name=WP_076752311.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004852037.1;locus_tag=PHA56_RS10470;product=EAL domain-containing protein;protein_id=WP_076752311.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2196734 2198098 . - . ID=gene-PHA56_RS10475;Name=sdaA;gbkey=Gene;gene=sdaA;gene_biotype=protein_coding;locus_tag=PHA56_RS10475;old_locus_tag=PHA56_10480 NZ_CP116214.1 Protein Homology CDS 2196734 2198098 . - 0 ID=cds-WP_014229814.1;Parent=gene-PHA56_RS10475;Dbxref=Genbank:WP_014229814.1;Name=WP_014229814.1;gbkey=CDS;gene=sdaA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227643.1;locus_tag=PHA56_RS10475;product=L-serine ammonia-lyase;protein_id=WP_014229814.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2198261 2198839 . - . ID=gene-PHA56_RS10480;Name=PHA56_RS10480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS10480;old_locus_tag=PHA56_10485 NZ_CP116214.1 Protein Homology CDS 2198261 2198839 . - 0 ID=cds-WP_004852034.1;Parent=gene-PHA56_RS10480;Dbxref=Genbank:WP_004852034.1;Name=WP_004852034.1;Ontology_term=GO:0000287,GO:0010945;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,CoA pyrophosphatase activity|0010945||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227642.1;locus_tag=PHA56_RS10480;product=CoA pyrophosphatase;protein_id=WP_004852034.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2198843 2200198 . - . ID=gene-PHA56_RS10485;Name=pabB;gbkey=Gene;gene=pabB;gene_biotype=protein_coding;locus_tag=PHA56_RS10485;old_locus_tag=PHA56_10490 NZ_CP116214.1 Protein Homology CDS 2198843 2200198 . - 0 ID=cds-WP_032694111.1;Parent=gene-PHA56_RS10485;Dbxref=Genbank:WP_032694111.1;Name=WP_032694111.1;Ontology_term=GO:0009396;gbkey=CDS;gene=pabB;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227641.1;locus_tag=PHA56_RS10485;product=aminodeoxychorismate synthase component 1;protein_id=WP_032694111.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2200289 2200468 . + . ID=gene-PHA56_RS10490;Name=PHA56_RS10490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS10490;old_locus_tag=PHA56_10495 NZ_CP116214.1 Protein Homology CDS 2200289 2200468 . + 0 ID=cds-WP_004103292.1;Parent=gene-PHA56_RS10490;Dbxref=Genbank:WP_004103292.1;Name=WP_004103292.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460779.1;locus_tag=PHA56_RS10490;product=YoaH family protein;protein_id=WP_004103292.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2200483 2202495 . - . ID=gene-PHA56_RS10495;Name=PHA56_RS10495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS10495;old_locus_tag=PHA56_10500 NZ_CP116214.1 Protein Homology CDS 2200483 2202495 . - 0 ID=cds-WP_032694110.1;Parent=gene-PHA56_RS10495;Dbxref=Genbank:WP_032694110.1;Name=WP_032694110.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014838806.1;locus_tag=PHA56_RS10495;product=heparinase II/III family protein;protein_id=WP_032694110.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2202495 2203733 . - . ID=gene-PHA56_RS10500;Name=PHA56_RS10500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS10500;old_locus_tag=PHA56_10505 NZ_CP116214.1 Protein Homology CDS 2202495 2203733 . - 0 ID=cds-WP_032721098.1;Parent=gene-PHA56_RS10500;Dbxref=Genbank:WP_032721098.1;Name=WP_032721098.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020476644.1;locus_tag=PHA56_RS10500;product=alginate lyase family protein;protein_id=WP_032721098.1;transl_table=11 NZ_CP116214.1 RefSeq pseudogene 2204259 2205549 . + . ID=gene-PHA56_RS10505;Name=PHA56_RS10505;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS10505;old_locus_tag=PHA56_10510;pseudo=true NZ_CP116214.1 Protein Homology CDS 2204259 2205549 . + 0 ID=cds-PHA56_RS10505;Parent=gene-PHA56_RS10505;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004138498.1;locus_tag=PHA56_RS10505;product=sugar ABC transporter substrate-binding protein;pseudo=true;transl_table=11 NZ_CP116214.1 RefSeq gene 2205561 2206502 . + . ID=gene-PHA56_RS10510;Name=PHA56_RS10510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS10510;old_locus_tag=PHA56_10515 NZ_CP116214.1 Protein Homology CDS 2205561 2206502 . + 0 ID=cds-WP_077255410.1;Parent=gene-PHA56_RS10510;Dbxref=Genbank:WP_077255410.1;Name=WP_077255410.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012967767.1;locus_tag=PHA56_RS10510;product=sugar ABC transporter permease;protein_id=WP_077255410.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2206512 2207351 . + . ID=gene-PHA56_RS10515;Name=PHA56_RS10515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS10515;old_locus_tag=PHA56_10520 NZ_CP116214.1 Protein Homology CDS 2206512 2207351 . + 0 ID=cds-WP_009651976.1;Parent=gene-PHA56_RS10515;Dbxref=Genbank:WP_009651976.1;Name=WP_009651976.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004707080.1;locus_tag=PHA56_RS10515;product=carbohydrate ABC transporter permease;protein_id=WP_009651976.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2207362 2208456 . + . ID=gene-PHA56_RS10520;Name=ugpC;gbkey=Gene;gene=ugpC;gene_biotype=protein_coding;locus_tag=PHA56_RS10520;old_locus_tag=PHA56_10525 NZ_CP116214.1 Protein Homology CDS 2207362 2208456 . + 0 ID=cds-WP_014229809.1;Parent=gene-PHA56_RS10520;Dbxref=Genbank:WP_014229809.1;Name=WP_014229809.1;Ontology_term=GO:0005524,GO:0140359;gbkey=CDS;gene=ugpC;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009652005.1;locus_tag=PHA56_RS10520;product=sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC;protein_id=WP_014229809.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2208464 2209603 . + . ID=gene-PHA56_RS10525;Name=PHA56_RS10525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS10525;old_locus_tag=PHA56_10530 NZ_CP116214.1 Protein Homology CDS 2208464 2209603 . + 0 ID=cds-WP_014229808.1;Parent=gene-PHA56_RS10525;Dbxref=Genbank:WP_014229808.1;Name=WP_014229808.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229808.1;locus_tag=PHA56_RS10525;product=alginate lyase family protein;protein_id=WP_014229808.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2209774 2210118 . - . ID=gene-PHA56_RS10530;Name=PHA56_RS10530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS10530;old_locus_tag=PHA56_10535 NZ_CP116214.1 Protein Homology CDS 2209774 2210118 . - 0 ID=cds-WP_004113724.1;Parent=gene-PHA56_RS10530;Dbxref=Genbank:WP_004113724.1;Name=WP_004113724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227639.1;locus_tag=PHA56_RS10530;product=RidA family protein;protein_id=WP_004113724.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2210251 2212161 . + . ID=gene-PHA56_RS10535;Name=PHA56_RS10535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS10535;old_locus_tag=PHA56_10540 NZ_CP116214.1 Protein Homology CDS 2210251 2212161 . + 0 ID=cds-WP_014229807.1;Parent=gene-PHA56_RS10535;Dbxref=Genbank:WP_014229807.1;Name=WP_014229807.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227638.1;locus_tag=PHA56_RS10535;product=ATP-dependent DNA helicase;protein_id=WP_014229807.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2212229 2212924 . + . ID=gene-PHA56_RS10540;Name=tsaB;gbkey=Gene;gene=tsaB;gene_biotype=protein_coding;locus_tag=PHA56_RS10540;old_locus_tag=PHA56_10545 NZ_CP116214.1 Protein Homology CDS 2212229 2212924 . + 0 ID=cds-WP_004852009.1;Parent=gene-PHA56_RS10540;Dbxref=Genbank:WP_004852009.1;Name=WP_004852009.1;Ontology_term=GO:0006400,GO:0003725;gbkey=CDS;gene=tsaB;go_function=double-stranded RNA binding|0003725||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227637.1;locus_tag=PHA56_RS10540;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB;protein_id=WP_004852009.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2212968 2213552 . + . ID=gene-PHA56_RS10545;Name=PHA56_RS10545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS10545;old_locus_tag=PHA56_10550 NZ_CP116214.1 Protein Homology CDS 2212968 2213552 . + 0 ID=cds-WP_004852007.1;Parent=gene-PHA56_RS10545;Dbxref=Genbank:WP_004852007.1;Name=WP_004852007.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227636.1;locus_tag=PHA56_RS10545;product=Slp family lipoprotein;protein_id=WP_004852007.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2213761 2215446 . + . ID=gene-PHA56_RS10550;Name=fadD;gbkey=Gene;gene=fadD;gene_biotype=protein_coding;locus_tag=PHA56_RS10550;old_locus_tag=PHA56_10555 NZ_CP116214.1 Protein Homology CDS 2213761 2215446 . + 0 ID=cds-WP_014229806.1;Parent=gene-PHA56_RS10550;Dbxref=Genbank:WP_014229806.1;Name=WP_014229806.1;gbkey=CDS;gene=fadD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460774.1;locus_tag=PHA56_RS10550;product=long-chain-fatty-acid--CoA ligase FadD;protein_id=WP_014229806.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2215528 2216643 . + . ID=gene-PHA56_RS10555;Name=rnd;gbkey=Gene;gene=rnd;gene_biotype=protein_coding;locus_tag=PHA56_RS10555;old_locus_tag=PHA56_10560 NZ_CP116214.1 Protein Homology CDS 2215528 2216643 . + 0 ID=cds-WP_004852003.1;Parent=gene-PHA56_RS10555;Dbxref=Genbank:WP_004852003.1;Name=WP_004852003.1;Ontology_term=GO:0008033,GO:0003676,GO:0008408,GO:0033890;gbkey=CDS;gene=rnd;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA,ribonuclease D activity|0033890||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227634.1;locus_tag=PHA56_RS10555;product=ribonuclease D;protein_id=WP_004852003.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2216708 2216977 . - . ID=gene-PHA56_RS10560;Name=minE;gbkey=Gene;gene=minE;gene_biotype=protein_coding;locus_tag=PHA56_RS10560;old_locus_tag=PHA56_10565 NZ_CP116214.1 Protein Homology CDS 2216708 2216977 . - 0 ID=cds-WP_002910902.1;Parent=gene-PHA56_RS10560;Dbxref=Genbank:WP_002910902.1;Name=WP_002910902.1;Ontology_term=GO:0032955;gbkey=CDS;gene=minE;go_process=regulation of division septum assembly|0032955||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227633.1;locus_tag=PHA56_RS10560;product=cell division topological specificity factor MinE;protein_id=WP_002910902.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2216981 2217793 . - . ID=gene-PHA56_RS10565;Name=minD;gbkey=Gene;gene=minD;gene_biotype=protein_coding;locus_tag=PHA56_RS10565;old_locus_tag=PHA56_10570 NZ_CP116214.1 Protein Homology CDS 2216981 2217793 . - 0 ID=cds-WP_004103267.1;Parent=gene-PHA56_RS10565;Dbxref=Genbank:WP_004103267.1;Name=WP_004103267.1;gbkey=CDS;gene=minD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020801817.1;locus_tag=PHA56_RS10565;product=septum site-determining protein MinD;protein_id=WP_004103267.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2217817 2218515 . - . ID=gene-PHA56_RS10570;Name=minC;gbkey=Gene;gene=minC;gene_biotype=protein_coding;locus_tag=PHA56_RS10570;old_locus_tag=PHA56_10575 NZ_CP116214.1 Protein Homology CDS 2217817 2218515 . - 0 ID=cds-WP_004852000.1;Parent=gene-PHA56_RS10570;Dbxref=Genbank:WP_004852000.1;Name=WP_004852000.1;Ontology_term=GO:0000918,GO:0004857;gbkey=CDS;gene=minC;go_function=enzyme inhibitor activity|0004857||IEA;go_process=division septum site selection|0000918||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227631.1;locus_tag=PHA56_RS10570;product=septum site-determining protein MinC;protein_id=WP_004852000.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2218642 2218923 . + . ID=gene-PHA56_RS10575;Name=PHA56_RS10575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS10575;old_locus_tag=PHA56_10580 NZ_CP116214.1 Protein Homology CDS 2218642 2218923 . + 0 ID=cds-WP_004138522.1;Parent=gene-PHA56_RS10575;Dbxref=Genbank:WP_004138522.1;Name=WP_004138522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910898.1;locus_tag=PHA56_RS10575;product=YcgL domain-containing protein;protein_id=WP_004138522.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2218941 2219600 . + . ID=gene-PHA56_RS10580;Name=PHA56_RS10580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS10580;old_locus_tag=PHA56_10585 NZ_CP116214.1 Protein Homology CDS 2218941 2219600 . + 0 ID=cds-WP_004851997.1;Parent=gene-PHA56_RS10580;Dbxref=Genbank:WP_004851997.1;Name=WP_004851997.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227628.1;locus_tag=PHA56_RS10580;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_004851997.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2219695 2220141 . + . ID=gene-PHA56_RS10585;Name=PHA56_RS10585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS10585;old_locus_tag=PHA56_10590 NZ_CP116214.1 Protein Homology CDS 2219695 2220141 . + 0 ID=cds-WP_004851995.1;Parent=gene-PHA56_RS10585;Dbxref=Genbank:WP_004851995.1;Name=WP_004851995.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227627.1;locus_tag=PHA56_RS10585;product=YcgN family cysteine cluster protein;protein_id=WP_004851995.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2220150 2220494 . - . ID=gene-PHA56_RS10590;Name=PHA56_RS10590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS10590;old_locus_tag=PHA56_10595 NZ_CP116214.1 Protein Homology CDS 2220150 2220494 . - 0 ID=cds-WP_004103255.1;Parent=gene-PHA56_RS10590;Dbxref=Genbank:WP_004103255.1;Name=WP_004103255.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009651999.1;locus_tag=PHA56_RS10590;product=DUF1971 domain-containing protein;protein_id=WP_004103255.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2220611 2221141 . - . ID=gene-PHA56_RS10595;Name=dsbB;gbkey=Gene;gene=dsbB;gene_biotype=protein_coding;locus_tag=PHA56_RS10595;old_locus_tag=PHA56_10600 NZ_CP116214.1 Protein Homology CDS 2220611 2221141 . - 0 ID=cds-WP_014229804.1;Parent=gene-PHA56_RS10595;Dbxref=Genbank:WP_014229804.1;Name=WP_014229804.1;Ontology_term=GO:0006457,GO:0015035,GO:0016020;gbkey=CDS;gene=dsbB;go_component=membrane|0016020||IEA;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227625.1;locus_tag=PHA56_RS10595;product=disulfide bond formation protein DsbB;protein_id=WP_014229804.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2221270 2222823 . - . ID=gene-PHA56_RS10600;Name=nhaB;gbkey=Gene;gene=nhaB;gene_biotype=protein_coding;locus_tag=PHA56_RS10600;old_locus_tag=PHA56_10605 NZ_CP116214.1 Protein Homology CDS 2221270 2222823 . - 0 ID=cds-WP_014838798.1;Parent=gene-PHA56_RS10600;Dbxref=Genbank:WP_014838798.1;Name=WP_014838798.1;Ontology_term=GO:0006814,GO:0015385,GO:0016020;gbkey=CDS;gene=nhaB;go_component=membrane|0016020||IEA;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004138525.1;locus_tag=PHA56_RS10600;product=sodium/proton antiporter NhaB;protein_id=WP_014838798.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2223069 2223788 . + . ID=gene-PHA56_RS10605;Name=fadR;gbkey=Gene;gene=fadR;gene_biotype=protein_coding;locus_tag=PHA56_RS10605;old_locus_tag=PHA56_10610 NZ_CP116214.1 Protein Homology CDS 2223069 2223788 . + 0 ID=cds-WP_014229802.1;Parent=gene-PHA56_RS10605;Dbxref=Genbank:WP_014229802.1;Name=WP_014229802.1;Ontology_term=GO:0006355,GO:0019217,GO:0000062,GO:0003677,GO:0003700;gbkey=CDS;gene=fadR;go_function=fatty-acyl-CoA binding|0000062||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,regulation of fatty acid metabolic process|0019217||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227623.1;locus_tag=PHA56_RS10605;product=fatty acid metabolism transcriptional regulator FadR;protein_id=WP_014229802.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2223959 2224393 . + . ID=gene-PHA56_RS10610;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=PHA56_RS10610;old_locus_tag=PHA56_10615 NZ_CP116214.1 Protein Homology CDS 2223959 2224393 . + 0 ID=cds-WP_014228411.1;Parent=gene-PHA56_RS10610;Dbxref=Genbank:WP_014228411.1;Name=WP_014228411.1;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000525033.1;locus_tag=PHA56_RS10610;product=IS200/IS605 family transposase;protein_id=WP_014228411.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2224479 2226011 . - . ID=gene-PHA56_RS10615;Name=PHA56_RS10615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS10615;old_locus_tag=PHA56_10620 NZ_CP116214.1 Protein Homology CDS 2224479 2226011 . - 0 ID=cds-WP_004138526.1;Parent=gene-PHA56_RS10615;Dbxref=Genbank:WP_004138526.1;Name=WP_004138526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227622.1;locus_tag=PHA56_RS10615;product=SpoVR family protein;protein_id=WP_004138526.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2226333 2227631 . + . ID=gene-PHA56_RS10620;Name=PHA56_RS10620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS10620;old_locus_tag=PHA56_10625 NZ_CP116214.1 Protein Homology CDS 2226333 2227631 . + 0 ID=cds-WP_014229801.1;Parent=gene-PHA56_RS10620;Dbxref=Genbank:WP_014229801.1;Name=WP_014229801.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309711.1;locus_tag=PHA56_RS10620;product=D-amino acid dehydrogenase;protein_id=WP_014229801.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2227644 2228714 . + . ID=gene-PHA56_RS10625;Name=dadX;gbkey=Gene;gene=dadX;gene_biotype=protein_coding;locus_tag=PHA56_RS10625;old_locus_tag=PHA56_10630 NZ_CP116214.1 Protein Homology CDS 2227644 2228714 . + 0 ID=cds-WP_014229800.1;Parent=gene-PHA56_RS10625;Dbxref=Genbank:WP_014229800.1;Name=WP_014229800.1;Ontology_term=GO:0006522,GO:0008784;gbkey=CDS;gene=dadX;go_function=alanine racemase activity|0008784||IEA;go_process=alanine metabolic process|0006522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227619.1;locus_tag=PHA56_RS10625;product=catabolic alanine racemase DadX;protein_id=WP_014229800.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2228850 2229275 . - . ID=gene-PHA56_RS10630;Name=PHA56_RS10630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS10630;old_locus_tag=PHA56_10635 NZ_CP116214.1 Protein Homology CDS 2228850 2229275 . - 0 ID=cds-WP_050597581.1;Parent=gene-PHA56_RS10630;Dbxref=Genbank:WP_050597581.1;Name=WP_050597581.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005149419.1;locus_tag=PHA56_RS10630;product=hypothetical protein;protein_id=WP_050597581.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2229276 2229665 . - . ID=gene-PHA56_RS10635;Name=PHA56_RS10635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS10635;old_locus_tag=PHA56_10640 NZ_CP116214.1 GeneMarkS-2+ CDS 2229276 2229665 . - 0 ID=cds-WP_032750340.1;Parent=gene-PHA56_RS10635;Dbxref=Genbank:WP_032750340.1;Name=WP_032750340.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PHA56_RS10635;product=hypothetical protein;protein_id=WP_032750340.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2229669 2230598 . - . ID=gene-PHA56_RS10640;Name=PHA56_RS10640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS10640;old_locus_tag=PHA56_10645 NZ_CP116214.1 Protein Homology CDS 2229669 2230598 . - 0 ID=cds-WP_205529260.1;Parent=gene-PHA56_RS10640;Dbxref=Genbank:WP_205529260.1;Name=WP_205529260.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001247207.1;locus_tag=PHA56_RS10640;product=tyrosine-type recombinase/integrase;protein_id=WP_205529260.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2230702 2231001 . - . ID=gene-PHA56_RS10645;Name=PHA56_RS10645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS10645;old_locus_tag=PHA56_10650 NZ_CP116214.1 Protein Homology CDS 2230702 2231001 . - 0 ID=cds-WP_032737941.1;Parent=gene-PHA56_RS10645;Dbxref=Genbank:WP_032737941.1;Name=WP_032737941.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006624234.1;locus_tag=PHA56_RS10645;product=helix-turn-helix transcriptional regulator;protein_id=WP_032737941.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2231083 2231349 . + . ID=gene-PHA56_RS10650;Name=PHA56_RS10650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS10650;old_locus_tag=PHA56_10655 NZ_CP116214.1 Protein Homology CDS 2231083 2231349 . + 0 ID=cds-WP_032737939.1;Parent=gene-PHA56_RS10650;Dbxref=Genbank:WP_032737939.1;Name=WP_032737939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011816121.1;locus_tag=PHA56_RS10650;product=hypothetical protein;protein_id=WP_032737939.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2231361 2231591 . + . ID=gene-PHA56_RS10655;Name=PHA56_RS10655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS10655;old_locus_tag=PHA56_10660 NZ_CP116214.1 Protein Homology CDS 2231361 2231591 . + 0 ID=cds-WP_048252413.1;Parent=gene-PHA56_RS10655;Dbxref=Genbank:WP_048252413.1;Name=WP_048252413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004216643.1;locus_tag=PHA56_RS10655;product=hypothetical protein;protein_id=WP_048252413.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2231603 2231842 . + . ID=gene-PHA56_RS10660;Name=PHA56_RS10660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS10660;old_locus_tag=PHA56_10665 NZ_CP116214.1 Protein Homology CDS 2231603 2231842 . + 0 ID=cds-WP_032737937.1;Parent=gene-PHA56_RS10660;Dbxref=Genbank:WP_032737937.1;Name=WP_032737937.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004201494.1;locus_tag=PHA56_RS10660;product=DUF4754 family protein;protein_id=WP_032737937.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2231845 2232099 . + . ID=gene-PHA56_RS10665;Name=PHA56_RS10665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS10665;old_locus_tag=PHA56_10670 NZ_CP116214.1 Protein Homology CDS 2231845 2232099 . + 0 ID=cds-WP_032751880.1;Parent=gene-PHA56_RS10665;Dbxref=Genbank:WP_032751880.1;Name=WP_032751880.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004187204.1;locus_tag=PHA56_RS10665;product=hypothetical protein;protein_id=WP_032751880.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2232187 2232411 . + . ID=gene-PHA56_RS10670;Name=PHA56_RS10670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS10670;old_locus_tag=PHA56_10675 NZ_CP116214.1 Protein Homology CDS 2232187 2232411 . + 0 ID=cds-WP_032750335.1;Parent=gene-PHA56_RS10670;Dbxref=Genbank:WP_032750335.1;Name=WP_032750335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003835830.1;locus_tag=PHA56_RS10670;product=hypothetical protein;protein_id=WP_032750335.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2232408 2232986 . + . ID=gene-PHA56_RS10675;Name=PHA56_RS10675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS10675;old_locus_tag=PHA56_10680 NZ_CP116214.1 Protein Homology CDS 2232408 2232986 . + 0 ID=cds-WP_032750332.1;Parent=gene-PHA56_RS10675;Dbxref=Genbank:WP_032750332.1;Name=WP_032750332.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004187206.1;locus_tag=PHA56_RS10675;product=3'-5' exonuclease;protein_id=WP_032750332.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2232997 2233950 . + . ID=gene-PHA56_RS10680;Name=PHA56_RS10680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS10680;old_locus_tag=PHA56_10685 NZ_CP116214.1 Protein Homology CDS 2232997 2233950 . + 0 ID=cds-WP_219678003.1;Parent=gene-PHA56_RS10680;Dbxref=Genbank:WP_219678003.1;Name=WP_219678003.1;Ontology_term=GO:0006306,GO:0009007;gbkey=CDS;go_function=site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA;go_process=DNA methylation|0006306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004187208.1;locus_tag=PHA56_RS10680;product=Dam family site-specific DNA-(adenine-N6)-methyltransferase;protein_id=WP_219678003.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2233950 2234219 . + . ID=gene-PHA56_RS10685;Name=PHA56_RS10685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS10685;old_locus_tag=PHA56_10690 NZ_CP116214.1 GeneMarkS-2+ CDS 2233950 2234219 . + 0 ID=cds-WP_032750329.1;Parent=gene-PHA56_RS10685;Dbxref=Genbank:WP_032750329.1;Name=WP_032750329.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PHA56_RS10685;product=hypothetical protein;protein_id=WP_032750329.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2234219 2234374 . + . ID=gene-PHA56_RS10690;Name=PHA56_RS10690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS10690;old_locus_tag=PHA56_10695 NZ_CP116214.1 GeneMarkS-2+ CDS 2234219 2234374 . + 0 ID=cds-WP_165795142.1;Parent=gene-PHA56_RS10690;Dbxref=Genbank:WP_165795142.1;Name=WP_165795142.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PHA56_RS10690;product=hypothetical protein;protein_id=WP_165795142.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2234350 2235360 . + . ID=gene-PHA56_RS10695;Name=PHA56_RS10695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS10695;old_locus_tag=PHA56_10700 NZ_CP116214.1 Protein Homology CDS 2234350 2235360 . + 0 ID=cds-WP_224266955.1;Parent=gene-PHA56_RS10695;Dbxref=Genbank:WP_224266955.1;Name=WP_224266955.1;Ontology_term=GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002440505.1;locus_tag=PHA56_RS10695;product=DNA cytosine methyltransferase;protein_id=WP_224266955.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2235353 2237893 . + . ID=gene-PHA56_RS10700;Name=PHA56_RS10700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS10700;old_locus_tag=PHA56_10705 NZ_CP116214.1 Protein Homology CDS 2235353 2237893 . + 0 ID=cds-WP_219678002.1;Parent=gene-PHA56_RS10700;Dbxref=Genbank:WP_219678002.1;Name=WP_219678002.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004200605.1;locus_tag=PHA56_RS10700;product=replication endonuclease;protein_id=WP_219678002.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2237890 2238105 . + . ID=gene-PHA56_RS10705;Name=PHA56_RS10705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS10705;old_locus_tag=PHA56_10710 NZ_CP116214.1 GeneMarkS-2+ CDS 2237890 2238105 . + 0 ID=cds-WP_119834706.1;Parent=gene-PHA56_RS10705;Dbxref=Genbank:WP_119834706.1;Name=WP_119834706.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PHA56_RS10705;product=hypothetical protein;protein_id=WP_119834706.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2238209 2238931 . + . ID=gene-PHA56_RS10710;Name=PHA56_RS10710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS10710;old_locus_tag=PHA56_10715 NZ_CP116214.1 Protein Homology CDS 2238209 2238931 . + 0 ID=cds-WP_119834707.1;Parent=gene-PHA56_RS10710;Dbxref=Genbank:WP_119834707.1;Name=WP_119834707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000120879.1;locus_tag=PHA56_RS10710;product=DNA adenine methylase;protein_id=WP_119834707.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2239000 2239407 . - . ID=gene-PHA56_RS10715;Name=PHA56_RS10715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS10715;old_locus_tag=PHA56_10720 NZ_CP116214.1 Protein Homology CDS 2239000 2239407 . - 0 ID=cds-WP_117035260.1;Parent=gene-PHA56_RS10715;Dbxref=Genbank:WP_117035260.1;Name=WP_117035260.1;Ontology_term=GO:0016301;gbkey=CDS;go_function=kinase activity|0016301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001561009.1;locus_tag=PHA56_RS10715;product=type II toxin-antitoxin system death-on-curing family toxin;protein_id=WP_117035260.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2239407 2239751 . - . ID=gene-PHA56_RS10720;Name=PHA56_RS10720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS10720;old_locus_tag=PHA56_10725 NZ_CP116214.1 Protein Homology CDS 2239407 2239751 . - 0 ID=cds-WP_117267753.1;Parent=gene-PHA56_RS10720;Dbxref=Genbank:WP_117267753.1;Name=WP_117267753.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001561011.1;locus_tag=PHA56_RS10720;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=WP_117267753.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2240210 2241262 . - . ID=gene-PHA56_RS10725;Name=PHA56_RS10725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS10725;old_locus_tag=PHA56_10730 NZ_CP116214.1 Protein Homology CDS 2240210 2241262 . - 0 ID=cds-WP_085001582.1;Parent=gene-PHA56_RS10725;Dbxref=Genbank:WP_085001582.1;Name=WP_085001582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000043651.1;locus_tag=PHA56_RS10725;product=phage portal protein;protein_id=WP_085001582.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2241262 2242983 . - . ID=gene-PHA56_RS10730;Name=PHA56_RS10730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS10730;old_locus_tag=PHA56_10735 NZ_CP116214.1 Protein Homology CDS 2241262 2242983 . - 0 ID=cds-WP_119834708.1;Parent=gene-PHA56_RS10730;Dbxref=Genbank:WP_119834708.1;Name=WP_119834708.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008500365.1;locus_tag=PHA56_RS10730;product=terminase family protein;protein_id=WP_119834708.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2243141 2243974 . + . ID=gene-PHA56_RS10735;Name=PHA56_RS10735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS10735;old_locus_tag=PHA56_10740 NZ_CP116214.1 Protein Homology CDS 2243141 2243974 . + 0 ID=cds-WP_119834709.1;Parent=gene-PHA56_RS10735;Dbxref=Genbank:WP_119834709.1;Name=WP_119834709.1;Ontology_term=GO:0019069;gbkey=CDS;go_process=viral capsid assembly|0019069||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008500366.1;locus_tag=PHA56_RS10735;product=GPO family capsid scaffolding protein;protein_id=WP_119834709.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2243999 2245048 . + . ID=gene-PHA56_RS10740;Name=PHA56_RS10740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS10740;old_locus_tag=PHA56_10745 NZ_CP116214.1 Protein Homology CDS 2243999 2245048 . + 0 ID=cds-WP_119834710.1;Parent=gene-PHA56_RS10740;Dbxref=Genbank:WP_119834710.1;Name=WP_119834710.1;Ontology_term=GO:0019069,GO:0005198,GO:0019028;gbkey=CDS;go_component=viral capsid|0019028||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral capsid assembly|0019069||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019724767.1;locus_tag=PHA56_RS10740;product=phage major capsid protein%2C P2 family;protein_id=WP_119834710.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2245096 2245992 . + . ID=gene-PHA56_RS10745;Name=gpM;gbkey=Gene;gene=gpM;gene_biotype=protein_coding;locus_tag=PHA56_RS10745;old_locus_tag=PHA56_10750 NZ_CP116214.1 Protein Homology CDS 2245096 2245992 . + 0 ID=cds-WP_119834721.1;Parent=gene-PHA56_RS10745;Dbxref=Genbank:WP_119834721.1;Name=WP_119834721.1;Ontology_term=GO:0019069,GO:0003677,GO:0004519;gbkey=CDS;gene=gpM;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA;go_process=viral capsid assembly|0019069||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010835072.1;locus_tag=PHA56_RS10745;product=phage terminase small subunit;protein_id=WP_119834721.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2246095 2246592 . + . ID=gene-PHA56_RS10750;Name=PHA56_RS10750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS10750;old_locus_tag=PHA56_10755 NZ_CP116214.1 Protein Homology CDS 2246095 2246592 . + 0 ID=cds-WP_032750312.1;Parent=gene-PHA56_RS10750;Dbxref=Genbank:WP_032750312.1;Name=WP_032750312.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019724765.1;locus_tag=PHA56_RS10750;product=head completion/stabilization protein;protein_id=WP_032750312.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2246592 2246792 . + . ID=gene-PHA56_RS10755;Name=PHA56_RS10755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS10755;old_locus_tag=PHA56_10760 NZ_CP116214.1 Protein Homology CDS 2246592 2246792 . + 0 ID=cds-WP_040205278.1;Parent=gene-PHA56_RS10755;Dbxref=Genbank:WP_040205278.1;Name=WP_040205278.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008500370.1;locus_tag=PHA56_RS10755;product=tail protein X;protein_id=WP_040205278.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2246783 2247064 . + . ID=gene-PHA56_RS10760;Name=PHA56_RS10760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS10760;old_locus_tag=PHA56_10765 NZ_CP116214.1 Protein Homology CDS 2246783 2247064 . + 0 ID=cds-WP_219678001.1;Parent=gene-PHA56_RS10760;Dbxref=Genbank:WP_219678001.1;Name=WP_219678001.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000420349.1;locus_tag=PHA56_RS10760;product=hypothetical protein;protein_id=WP_219678001.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2247061 2247612 . + . ID=gene-PHA56_RS10765;Name=PHA56_RS10765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS10765;old_locus_tag=PHA56_10770 NZ_CP116214.1 Protein Homology CDS 2247061 2247612 . + 0 ID=cds-WP_119834711.1;Parent=gene-PHA56_RS10765;Dbxref=Genbank:WP_119834711.1;Name=WP_119834711.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019724762.1;locus_tag=PHA56_RS10765;product=lysozyme;protein_id=WP_119834711.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2247853 2248152 . + . ID=gene-PHA56_RS10770;Name=PHA56_RS10770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS10770;old_locus_tag=PHA56_10775 NZ_CP116214.1 Protein Homology CDS 2247853 2248152 . + 0 ID=cds-WP_119834712.1;Parent=gene-PHA56_RS10770;Dbxref=Genbank:WP_119834712.1;Name=WP_119834712.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019724761.1;locus_tag=PHA56_RS10770;product=peptidase;protein_id=WP_119834712.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2248149 2248607 . + . ID=gene-PHA56_RS10775;Name=PHA56_RS10775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS10775;old_locus_tag=PHA56_10780 NZ_CP116214.1 Protein Homology CDS 2248149 2248607 . + 0 ID=cds-WP_042944035.1;Parent=gene-PHA56_RS10775;Dbxref=Genbank:WP_042944035.1;Name=WP_042944035.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019843881.1;locus_tag=PHA56_RS10775;product=phage tail protein;protein_id=WP_042944035.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2248604 2249245 . + . ID=gene-PHA56_RS10780;Name=PHA56_RS10780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS10780;old_locus_tag=PHA56_10785 NZ_CP116214.1 Protein Homology CDS 2248604 2249245 . + 0 ID=cds-WP_119834713.1;Parent=gene-PHA56_RS10780;Dbxref=Genbank:WP_119834713.1;Name=WP_119834713.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004201513.1;locus_tag=PHA56_RS10780;product=phage virion morphogenesis protein;protein_id=WP_119834713.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2249245 2249829 . + . ID=gene-PHA56_RS10785;Name=PHA56_RS10785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS10785;old_locus_tag=PHA56_10790 NZ_CP116214.1 Protein Homology CDS 2249245 2249829 . + 0 ID=cds-WP_119834714.1;Parent=gene-PHA56_RS10785;Dbxref=Genbank:WP_119834714.1;Name=WP_119834714.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010835079.1;locus_tag=PHA56_RS10785;product=phage baseplate assembly protein V;protein_id=WP_119834714.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2249826 2250191 . + . ID=gene-PHA56_RS10790;Name=PHA56_RS10790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS10790;old_locus_tag=PHA56_10795 NZ_CP116214.1 Protein Homology CDS 2249826 2250191 . + 0 ID=cds-WP_119834715.1;Parent=gene-PHA56_RS10790;Dbxref=Genbank:WP_119834715.1;Name=WP_119834715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019724757.1;locus_tag=PHA56_RS10790;product=GPW/gp25 family protein;protein_id=WP_119834715.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2250178 2251077 . + . ID=gene-PHA56_RS10795;Name=PHA56_RS10795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS10795;old_locus_tag=PHA56_10800 NZ_CP116214.1 Protein Homology CDS 2250178 2251077 . + 0 ID=cds-WP_119834716.1;Parent=gene-PHA56_RS10795;Dbxref=Genbank:WP_119834716.1;Name=WP_119834716.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006117898.1;locus_tag=PHA56_RS10795;product=baseplate J/gp47 family protein;protein_id=WP_119834716.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2251070 2251666 . + . ID=gene-PHA56_RS10800;Name=PHA56_RS10800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS10800;old_locus_tag=PHA56_10805 NZ_CP116214.1 Protein Homology CDS 2251070 2251666 . + 0 ID=cds-WP_119834717.1;Parent=gene-PHA56_RS10800;Dbxref=Genbank:WP_119834717.1;Name=WP_119834717.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004201517.1;locus_tag=PHA56_RS10800;product=phage tail protein I;protein_id=WP_119834717.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2251672 2253714 . + . ID=gene-PHA56_RS10805;Name=PHA56_RS10805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS10805;old_locus_tag=PHA56_10810 NZ_CP116214.1 Protein Homology CDS 2251672 2253714 . + 0 ID=cds-WP_219677999.1;Parent=gene-PHA56_RS10805;Dbxref=Genbank:WP_219677999.1;Name=WP_219677999.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020323992.1;locus_tag=PHA56_RS10805;product=hypothetical protein;protein_id=WP_219677999.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2253715 2254035 . + . ID=gene-PHA56_RS10810;Name=PHA56_RS10810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS10810;old_locus_tag=PHA56_10815 NZ_CP116214.1 GeneMarkS-2+ CDS 2253715 2254035 . + 0 ID=cds-WP_032750002.1;Parent=gene-PHA56_RS10810;Dbxref=Genbank:WP_032750002.1;Name=WP_032750002.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PHA56_RS10810;product=hypothetical protein;protein_id=WP_032750002.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2254038 2255201 . + . ID=gene-PHA56_RS10815;Name=PHA56_RS10815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS10815;old_locus_tag=PHA56_10820 NZ_CP116214.1 Protein Homology CDS 2254038 2255201 . + 0 ID=cds-WP_032750001.1;Parent=gene-PHA56_RS10815;Dbxref=Genbank:WP_032750001.1;Name=WP_032750001.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002896191.1;locus_tag=PHA56_RS10815;product=phage tail protein;protein_id=WP_032750001.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2255299 2255787 . - . ID=gene-PHA56_RS10820;Name=PHA56_RS10820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS10820;old_locus_tag=PHA56_10825 NZ_CP116214.1 Protein Homology CDS 2255299 2255787 . - 0 ID=cds-WP_048252585.1;Parent=gene-PHA56_RS10820;Dbxref=Genbank:WP_048252585.1;Name=WP_048252585.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004204486.1;locus_tag=PHA56_RS10820;product=phage tail protein;protein_id=WP_048252585.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2255802 2258723 . - . ID=gene-PHA56_RS10825;Name=PHA56_RS10825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS10825;old_locus_tag=PHA56_10830 NZ_CP116214.1 Protein Homology CDS 2255802 2258723 . - 0 ID=cds-WP_170927889.1;Parent=gene-PHA56_RS10825;Dbxref=Genbank:WP_170927889.1;Name=WP_170927889.1;Ontology_term=GO:0016032,GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008500384.1;locus_tag=PHA56_RS10825;product=phage tail tape measure protein;protein_id=WP_170927889.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2258713 2258889 . - . ID=gene-PHA56_RS10830;Name=PHA56_RS10830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS10830;old_locus_tag=PHA56_10835 NZ_CP116214.1 Protein Homology CDS 2258713 2258889 . - 0 ID=cds-WP_071836356.1;Parent=gene-PHA56_RS10830;Dbxref=Genbank:WP_071836356.1;Name=WP_071836356.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009114945.1;locus_tag=PHA56_RS10830;product=GpE family phage tail protein;protein_id=WP_071836356.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2258886 2259185 . - . ID=gene-PHA56_RS10835;Name=PHA56_RS10835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS10835;old_locus_tag=PHA56_10840 NZ_CP116214.1 Protein Homology CDS 2258886 2259185 . - 0 ID=cds-WP_032749999.1;Parent=gene-PHA56_RS10835;Dbxref=Genbank:WP_032749999.1;Name=WP_032749999.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000117456.1;locus_tag=PHA56_RS10835;product=phage tail assembly protein;protein_id=WP_032749999.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2259240 2259755 . - . ID=gene-PHA56_RS10840;Name=PHA56_RS10840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS10840;old_locus_tag=PHA56_10845 NZ_CP116214.1 Protein Homology CDS 2259240 2259755 . - 0 ID=cds-WP_032747301.1;Parent=gene-PHA56_RS10840;Dbxref=Genbank:WP_032747301.1;Name=WP_032747301.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004204490.1;locus_tag=PHA56_RS10840;product=phage major tail tube protein;protein_id=WP_032747301.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2259755 2260936 . - . ID=gene-PHA56_RS10845;Name=PHA56_RS10845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS10845;old_locus_tag=PHA56_10850 NZ_CP116214.1 Protein Homology CDS 2259755 2260936 . - 0 ID=cds-WP_032749997.1;Parent=gene-PHA56_RS10845;Dbxref=Genbank:WP_032749997.1;Name=WP_032749997.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004131587.1;locus_tag=PHA56_RS10845;product=phage tail sheath subtilisin-like domain-containing protein;protein_id=WP_032749997.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2261089 2262243 . + . ID=gene-PHA56_RS10850;Name=PHA56_RS10850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS10850;old_locus_tag=PHA56_10855 NZ_CP116214.1 Protein Homology CDS 2261089 2262243 . + 0 ID=cds-WP_119834719.1;Parent=gene-PHA56_RS10850;Dbxref=Genbank:WP_119834719.1;Name=WP_119834719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019724746.1;locus_tag=PHA56_RS10850;product=phage late control D family protein;protein_id=WP_119834719.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2262288 2262536 . + . ID=gene-PHA56_RS10855;Name=PHA56_RS10855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS10855;old_locus_tag=PHA56_10860 NZ_CP116214.1 Protein Homology CDS 2262288 2262536 . + 0 ID=cds-WP_071995732.1;Parent=gene-PHA56_RS10855;Dbxref=Genbank:WP_071995732.1;Name=WP_071995732.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008500389.1;locus_tag=PHA56_RS10855;product=ogr/Delta-like zinc finger family protein;protein_id=WP_071995732.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2262583 2262969 . - . ID=gene-PHA56_RS10860;Name=PHA56_RS10860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS10860;old_locus_tag=PHA56_10865 NZ_CP116214.1 Protein Homology CDS 2262583 2262969 . - 0 ID=cds-WP_071995731.1;Parent=gene-PHA56_RS10860;Dbxref=Genbank:WP_071995731.1;Name=WP_071995731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011094142.1;locus_tag=PHA56_RS10860;product=hypothetical protein;protein_id=WP_071995731.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2263094 2264827 . - . ID=gene-PHA56_RS10865;Name=PHA56_RS10865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS10865;old_locus_tag=PHA56_10870 NZ_CP116214.1 Protein Homology CDS 2263094 2264827 . - 0 ID=cds-WP_004851981.1;Parent=gene-PHA56_RS10865;Dbxref=Genbank:WP_004851981.1;Name=WP_004851981.1;Ontology_term=GO:0006813,GO:0006884,GO:0055085,GO:0051139,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metal cation:proton antiporter activity|0051139||IEA;go_process=potassium ion transport|0006813||IEA,cell volume homeostasis|0006884||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227618.1;locus_tag=PHA56_RS10865;product=potassium/proton antiporter;protein_id=WP_004851981.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2264920 2265834 . - . ID=gene-PHA56_RS10870;Name=ldcA;gbkey=Gene;gene=ldcA;gene_biotype=protein_coding;locus_tag=PHA56_RS10870;old_locus_tag=PHA56_10875 NZ_CP116214.1 Protein Homology CDS 2264920 2265834 . - 0 ID=cds-WP_014229799.1;Parent=gene-PHA56_RS10870;Dbxref=Genbank:WP_014229799.1;Name=WP_014229799.1;gbkey=CDS;gene=ldcA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012541280.1;locus_tag=PHA56_RS10870;product=muramoyltetrapeptide carboxypeptidase;protein_id=WP_014229799.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2265930 2266541 . + . ID=gene-PHA56_RS10875;Name=emtA;gbkey=Gene;gene=emtA;gene_biotype=protein_coding;locus_tag=PHA56_RS10875;old_locus_tag=PHA56_10880 NZ_CP116214.1 Protein Homology CDS 2265930 2266541 . + 0 ID=cds-WP_009651970.1;Parent=gene-PHA56_RS10875;Dbxref=Genbank:WP_009651970.1;Name=WP_009651970.1;gbkey=CDS;gene=emtA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227615.1;locus_tag=PHA56_RS10875;product=membrane-bound lytic murein transglycosylase EmtA;protein_id=WP_009651970.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2266646 2268394 . - . ID=gene-PHA56_RS10880;Name=PHA56_RS10880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS10880;old_locus_tag=PHA56_10885 NZ_CP116214.1 Protein Homology CDS 2266646 2268394 . - 0 ID=cds-WP_014229798.1;Parent=gene-PHA56_RS10880;Dbxref=Genbank:WP_014229798.1;Name=WP_014229798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004851976.1;locus_tag=PHA56_RS10880;product=alpha%2Calpha-trehalase;protein_id=WP_014229798.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2268913 2270271 . + . ID=gene-PHA56_RS10885;Name=PHA56_RS10885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS10885;old_locus_tag=PHA56_10890 NZ_CP116214.1 Protein Homology CDS 2268913 2270271 . + 0 ID=cds-WP_014229797.1;Parent=gene-PHA56_RS10885;Dbxref=Genbank:WP_014229797.1;Name=WP_014229797.1;Ontology_term=GO:0006812,GO:0008643,GO:0015486,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=glycoside-pentoside-hexuronide:cation symporter activity|0015486||IEA;go_process=monoatomic cation transport|0006812||IEA,carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014838795.1;locus_tag=PHA56_RS10885;product=glycoside-pentoside-hexuronide (GPH):cation symporter;protein_id=WP_014229797.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2270374 2271765 . + . ID=gene-PHA56_RS10890;Name=PHA56_RS10890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS10890;old_locus_tag=PHA56_10895 NZ_CP116214.1 Protein Homology CDS 2270374 2271765 . + 0 ID=cds-WP_038424662.1;Parent=gene-PHA56_RS10890;Dbxref=Genbank:WP_038424662.1;Name=WP_038424662.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461742.1;locus_tag=PHA56_RS10890;product=carbohydrate porin;protein_id=WP_038424662.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2271849 2274629 . + . ID=gene-PHA56_RS10895;Name=PHA56_RS10895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS10895;old_locus_tag=PHA56_10900 NZ_CP116214.1 Protein Homology CDS 2271849 2274629 . + 0 ID=cds-WP_271292969.1;Parent=gene-PHA56_RS10895;Dbxref=Genbank:WP_271292969.1;Name=WP_271292969.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016808868.1;locus_tag=PHA56_RS10895;product=glycoside hydrolase family 3 N-terminal domain-containing protein;protein_id=WP_271292969.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2274651 2275541 . + . ID=gene-PHA56_RS10900;Name=PHA56_RS10900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS10900;old_locus_tag=PHA56_10905 NZ_CP116214.1 Protein Homology CDS 2274651 2275541 . + 0 ID=cds-WP_038424661.1;Parent=gene-PHA56_RS10900;Dbxref=Genbank:WP_038424661.1;Name=WP_038424661.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004851968.1;locus_tag=PHA56_RS10900;product=alpha/beta hydrolase;protein_id=WP_038424661.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2275749 2277188 . + . ID=gene-PHA56_RS10905;Name=PHA56_RS10905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS10905;old_locus_tag=PHA56_10910 NZ_CP116214.1 Protein Homology CDS 2275749 2277188 . + 0 ID=cds-WP_014229793.1;Parent=gene-PHA56_RS10905;Dbxref=Genbank:WP_014229793.1;Name=WP_014229793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227612.1;locus_tag=PHA56_RS10905;product=circularly permuted type 2 ATP-grasp protein;protein_id=WP_014229793.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2277182 2278111 . + . ID=gene-PHA56_RS10910;Name=PHA56_RS10910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS10910;old_locus_tag=PHA56_10915 NZ_CP116214.1 Protein Homology CDS 2277182 2278111 . + 0 ID=cds-WP_004103215.1;Parent=gene-PHA56_RS10910;Dbxref=Genbank:WP_004103215.1;Name=WP_004103215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227611.1;locus_tag=PHA56_RS10910;product=alpha-E domain-containing protein;protein_id=WP_004103215.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2278108 2278923 . + . ID=gene-PHA56_RS10915;Name=PHA56_RS10915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS10915;old_locus_tag=PHA56_10920 NZ_CP116214.1 Protein Homology CDS 2278108 2278923 . + 0 ID=cds-WP_014229792.1;Parent=gene-PHA56_RS10915;Dbxref=Genbank:WP_014229792.1;Name=WP_014229792.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227610.1;locus_tag=PHA56_RS10915;product=transglutaminase family protein;protein_id=WP_014229792.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2278942 2279694 . + . ID=gene-PHA56_RS10920;Name=PHA56_RS10920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS10920;old_locus_tag=PHA56_10925 NZ_CP116214.1 Protein Homology CDS 2278942 2279694 . + 0 ID=cds-WP_038424660.1;Parent=gene-PHA56_RS10920;Dbxref=Genbank:WP_038424660.1;Name=WP_038424660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004121932.1;locus_tag=PHA56_RS10920;product=proteasome-type protease;protein_id=WP_038424660.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2279679 2280446 . - . ID=gene-PHA56_RS10925;Name=PHA56_RS10925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS10925;old_locus_tag=PHA56_10930 NZ_CP116214.1 Protein Homology CDS 2279679 2280446 . - 0 ID=cds-WP_038424659.1;Parent=gene-PHA56_RS10925;Dbxref=Genbank:WP_038424659.1;Name=WP_038424659.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004121928.1;locus_tag=PHA56_RS10925;product=helix-turn-helix transcriptional regulator;protein_id=WP_038424659.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2280541 2281680 . + . ID=gene-PHA56_RS10930;Name=PHA56_RS10930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS10930;old_locus_tag=PHA56_10935 NZ_CP116214.1 Protein Homology CDS 2280541 2281680 . + 0 ID=cds-WP_271292970.1;Parent=gene-PHA56_RS10930;Dbxref=Genbank:WP_271292970.1;Name=WP_271292970.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014838790.1;locus_tag=PHA56_RS10930;product=MFS transporter;protein_id=WP_271292970.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2281785 2282768 . + . ID=gene-PHA56_RS10935;Name=PHA56_RS10935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS10935;old_locus_tag=PHA56_10940 NZ_CP116214.1 Protein Homology CDS 2281785 2282768 . + 0 ID=cds-WP_014229788.1;Parent=gene-PHA56_RS10935;Dbxref=Genbank:WP_014229788.1;Name=WP_014229788.1;Ontology_term=GO:0006629;gbkey=CDS;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016808865.1;locus_tag=PHA56_RS10935;product=fatty acid desaturase;protein_id=WP_014229788.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2282761 2283561 . + . ID=gene-PHA56_RS10940;Name=PHA56_RS10940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS10940;old_locus_tag=PHA56_10945 NZ_CP116214.1 Protein Homology CDS 2282761 2283561 . + 0 ID=cds-WP_014229787.1;Parent=gene-PHA56_RS10940;Dbxref=Genbank:WP_014229787.1;Name=WP_014229787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004899052.1;locus_tag=PHA56_RS10940;product=PhnD/SsuA/transferrin family substrate-binding protein;protein_id=WP_014229787.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2284419 2285756 . - . ID=gene-PHA56_RS10945;Name=PHA56_RS10945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS10945;old_locus_tag=PHA56_10950 NZ_CP116214.1 Protein Homology CDS 2284419 2285756 . - 0 ID=cds-WP_014838788.1;Parent=gene-PHA56_RS10945;Dbxref=Genbank:WP_014838788.1;Name=WP_014838788.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR03860.1;locus_tag=PHA56_RS10945;product=LLM class flavin-dependent oxidoreductase;protein_id=WP_014838788.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2285818 2286717 . - . ID=gene-PHA56_RS10950;Name=PHA56_RS10950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS10950;old_locus_tag=PHA56_10955 NZ_CP116214.1 Protein Homology CDS 2285818 2286717 . - 0 ID=cds-WP_038424658.1;Parent=gene-PHA56_RS10950;Dbxref=Genbank:WP_038424658.1;Name=WP_038424658.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004133633.1;locus_tag=PHA56_RS10950;product=ABC transporter substrate-binding protein;protein_id=WP_038424658.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2286759 2287427 . - . ID=gene-PHA56_RS10955;Name=PHA56_RS10955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS10955;old_locus_tag=PHA56_10960 NZ_CP116214.1 Protein Homology CDS 2286759 2287427 . - 0 ID=cds-WP_014229784.1;Parent=gene-PHA56_RS10955;Dbxref=Genbank:WP_014229784.1;Name=WP_014229784.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229784.1;locus_tag=PHA56_RS10955;product=ABC transporter permease;protein_id=WP_014229784.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2287427 2288056 . - . ID=gene-PHA56_RS10960;Name=PHA56_RS10960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS10960;old_locus_tag=PHA56_10965 NZ_CP116214.1 Protein Homology CDS 2287427 2288056 . - 0 ID=cds-WP_014229783.1;Parent=gene-PHA56_RS10960;Dbxref=Genbank:WP_014229783.1;Name=WP_014229783.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229783.1;locus_tag=PHA56_RS10960;product=ABC transporter permease subunit;protein_id=WP_014229783.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2288049 2289137 . - . ID=gene-PHA56_RS10965;Name=PHA56_RS10965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS10965;old_locus_tag=PHA56_10970 NZ_CP116214.1 Protein Homology CDS 2288049 2289137 . - 0 ID=cds-WP_025108425.1;Parent=gene-PHA56_RS10965;Dbxref=Genbank:WP_025108425.1;Name=WP_025108425.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012967793.1;locus_tag=PHA56_RS10965;product=ABC transporter ATP-binding protein;protein_id=WP_025108425.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2289316 2290002 . - . ID=gene-PHA56_RS10970;Name=PHA56_RS10970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS10970;old_locus_tag=PHA56_10975 NZ_CP116214.1 Protein Homology CDS 2289316 2290002 . - 0 ID=cds-WP_014229781.1;Parent=gene-PHA56_RS10970;Dbxref=Genbank:WP_014229781.1;Name=WP_014229781.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017145663.1;locus_tag=PHA56_RS10970;product=RluA family pseudouridine synthase;protein_id=WP_014229781.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2290062 2290955 . - . ID=gene-PHA56_RS10975;Name=PHA56_RS10975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS10975;old_locus_tag=PHA56_10980 NZ_CP116214.1 Protein Homology CDS 2290062 2290955 . - 0 ID=cds-WP_004851947.1;Parent=gene-PHA56_RS10975;Dbxref=Genbank:WP_004851947.1;Name=WP_004851947.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004851947.1;locus_tag=PHA56_RS10975;product=LysR substrate-binding domain-containing protein;protein_id=WP_004851947.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2291271 2292911 . + . ID=gene-PHA56_RS10980;Name=pckA;gbkey=Gene;gene=pckA;gene_biotype=protein_coding;locus_tag=PHA56_RS10980;old_locus_tag=PHA56_10985 NZ_CP116214.1 Protein Homology CDS 2291271 2292911 . + 0 ID=cds-WP_014229780.1;Parent=gene-PHA56_RS10980;Dbxref=Genbank:WP_014229780.1;Name=WP_014229780.1;Ontology_term=GO:0006094,GO:0004612;gbkey=CDS;gene=pckA;go_function=phosphoenolpyruvate carboxykinase (ATP) activity|0004612||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014838785.1;locus_tag=PHA56_RS10980;product=phosphoenolpyruvate carboxykinase (ATP);protein_id=WP_014229780.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2293145 2293639 . + . ID=gene-PHA56_RS10985;Name=PHA56_RS10985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS10985;old_locus_tag=PHA56_10990 NZ_CP116214.1 Protein Homology CDS 2293145 2293639 . + 0 ID=cds-WP_014229779.1;Parent=gene-PHA56_RS10985;Dbxref=Genbank:WP_014229779.1;Name=WP_014229779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004103192.1;locus_tag=PHA56_RS10985;product=hypothetical protein;protein_id=WP_014229779.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2293718 2294245 . - . ID=gene-PHA56_RS10990;Name=PHA56_RS10990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS10990;old_locus_tag=PHA56_10995 NZ_CP116214.1 Protein Homology CDS 2293718 2294245 . - 0 ID=cds-WP_032694098.1;Parent=gene-PHA56_RS10990;Dbxref=Genbank:WP_032694098.1;Name=WP_032694098.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229778.1;locus_tag=PHA56_RS10990;product=lipocalin family protein;protein_id=WP_032694098.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2294484 2294894 . + . ID=gene-PHA56_RS10995;Name=uraH;gbkey=Gene;gene=uraH;gene_biotype=protein_coding;locus_tag=PHA56_RS10995;old_locus_tag=PHA56_11000 NZ_CP116214.1 Protein Homology CDS 2294484 2294894 . + 0 ID=cds-WP_014229777.1;Parent=gene-PHA56_RS10995;Dbxref=Genbank:WP_014229777.1;Name=WP_014229777.1;Ontology_term=GO:0019628;gbkey=CDS;gene=uraH;go_process=urate catabolic process|0019628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004851940.1;locus_tag=PHA56_RS10995;product=hydroxyisourate hydrolase;protein_id=WP_014229777.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2294975 2295409 . - . ID=gene-PHA56_RS11000;Name=PHA56_RS11000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS11000;old_locus_tag=PHA56_11005 NZ_CP116214.1 Protein Homology CDS 2294975 2295409 . - 0 ID=cds-WP_004851939.1;Parent=gene-PHA56_RS11000;Dbxref=Genbank:WP_004851939.1;Name=WP_004851939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004851939.1;locus_tag=PHA56_RS11000;product=PTS sugar transporter subunit IIA;protein_id=WP_004851939.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2295406 2296845 . - . ID=gene-PHA56_RS11005;Name=PHA56_RS11005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS11005;old_locus_tag=PHA56_11010 NZ_CP116214.1 Protein Homology CDS 2295406 2296845 . - 0 ID=cds-WP_032718856.1;Parent=gene-PHA56_RS11005;Dbxref=Genbank:WP_032718856.1;Name=WP_032718856.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004133618.1;locus_tag=PHA56_RS11005;product=sugar porter family MFS transporter;protein_id=WP_032718856.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2297838 2301050 . + . ID=gene-PHA56_RS11010;Name=PHA56_RS11010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS11010;old_locus_tag=PHA56_11015 NZ_CP116214.1 Protein Homology CDS 2297838 2301050 . + 0 ID=cds-WP_189087277.1;Parent=gene-PHA56_RS11010;Dbxref=Genbank:WP_189087277.1;Name=WP_189087277.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004103183.1;locus_tag=PHA56_RS11010;product=molybdopterin-dependent oxidoreductase;protein_id=WP_189087277.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2301063 2301521 . + . ID=gene-PHA56_RS11015;Name=PHA56_RS11015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS11015;old_locus_tag=PHA56_11020 NZ_CP116214.1 Protein Homology CDS 2301063 2301521 . + 0 ID=cds-WP_009651983.1;Parent=gene-PHA56_RS11015;Dbxref=Genbank:WP_009651983.1;Name=WP_009651983.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004103181.1;locus_tag=PHA56_RS11015;product=(2Fe-2S)-binding protein;protein_id=WP_009651983.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2301588 2302193 . + . ID=gene-PHA56_RS11020;Name=PHA56_RS11020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS11020;old_locus_tag=PHA56_11025 NZ_CP116214.1 Protein Homology CDS 2301588 2302193 . + 0 ID=cds-WP_014838779.1;Parent=gene-PHA56_RS11020;Dbxref=Genbank:WP_014838779.1;Name=WP_014838779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014838779.1;locus_tag=PHA56_RS11020;product=CTP--molybdopterin cytidylyltransferase;protein_id=WP_014838779.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2302260 2304407 . - . ID=gene-PHA56_RS11025;Name=fdhF;gbkey=Gene;gene=fdhF;gene_biotype=protein_coding;locus_tag=PHA56_RS11025;old_locus_tag=PHA56_11030 NZ_CP116214.1 Protein Homology CDS 2302260 2304407 . - 0 ID=cds-WP_077598961.1;Parent=gene-PHA56_RS11025;Dbxref=Genbank:WP_077598961.1;Name=WP_077598961.1;Ontology_term=GO:0015942,GO:0008863,GO:0009326;gbkey=CDS;gene=fdhF;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA;go_process=formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463150.1;locus_tag=PHA56_RS11025;product=formate dehydrogenase subunit alpha;protein_id=WP_077598961.1;transl_except=(pos:complement(2303988..2303990)%2Caa:Sec);transl_table=11 NZ_CP116214.1 RefSeq gene 2304544 2306016 . - . ID=gene-PHA56_RS11030;Name=PHA56_RS11030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS11030;old_locus_tag=PHA56_11035 NZ_CP116214.1 Protein Homology CDS 2304544 2306016 . - 0 ID=cds-WP_004851923.1;Parent=gene-PHA56_RS11030;Dbxref=Genbank:WP_004851923.1;Name=WP_004851923.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229771.1;locus_tag=PHA56_RS11030;product=nucleobase:cation symporter-2 family protein;protein_id=WP_004851923.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2306529 2308469 . + . ID=gene-PHA56_RS11035;Name=ygfT;gbkey=Gene;gene=ygfT;gene_biotype=protein_coding;locus_tag=PHA56_RS11035;old_locus_tag=PHA56_11040 NZ_CP116214.1 Protein Homology CDS 2306529 2308469 . + 0 ID=cds-WP_076752307.1;Parent=gene-PHA56_RS11035;Dbxref=Genbank:WP_076752307.1;Name=WP_076752307.1;Ontology_term=GO:0016491,GO:0051536;gbkey=CDS;gene=ygfT;go_function=oxidoreductase activity|0016491||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004851921.1;locus_tag=PHA56_RS11035;product=formate-dependent uric acid utilization protein YgfT;protein_id=WP_076752307.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2308466 2308942 . + . ID=gene-PHA56_RS11040;Name=PHA56_RS11040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS11040;old_locus_tag=PHA56_11045 NZ_CP116214.1 Protein Homology CDS 2308466 2308942 . + 0 ID=cds-WP_014229768.1;Parent=gene-PHA56_RS11040;Dbxref=Genbank:WP_014229768.1;Name=WP_014229768.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004121863.1;locus_tag=PHA56_RS11040;product=4Fe-4S dicluster domain-containing protein;protein_id=WP_014229768.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2309047 2310378 . - . ID=gene-PHA56_RS11045;Name=ssnA;gbkey=Gene;gene=ssnA;gene_biotype=protein_coding;locus_tag=PHA56_RS11045;old_locus_tag=PHA56_11050 NZ_CP116214.1 Protein Homology CDS 2309047 2310378 . - 0 ID=cds-WP_162933644.1;Parent=gene-PHA56_RS11045;Dbxref=Genbank:WP_162933644.1;Name=WP_162933644.1;Ontology_term=GO:0016810;gbkey=CDS;gene=ssnA;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004851916.1;locus_tag=PHA56_RS11045;product=putative aminohydrolase SsnA;protein_id=WP_162933644.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2310381 2313485 . - . ID=gene-PHA56_RS11050;Name=ygfK;gbkey=Gene;gene=ygfK;gene_biotype=protein_coding;locus_tag=PHA56_RS11050;old_locus_tag=PHA56_11055 NZ_CP116214.1 Protein Homology CDS 2310381 2313485 . - 0 ID=cds-WP_004851914.1;Parent=gene-PHA56_RS11050;Dbxref=Genbank:WP_004851914.1;Name=WP_004851914.1;Ontology_term=GO:0016491,GO:0051536;gbkey=CDS;gene=ygfK;go_function=oxidoreductase activity|0016491||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417354.1;locus_tag=PHA56_RS11050;product=putative selenate reductase subunit YgfK;protein_id=WP_004851914.1;transl_table=11 NZ_CP116214.1 RefSeq pseudogene 2314211 2314987 . + . ID=gene-PHA56_RS11055;Name=PHA56_RS11055;end_range=2314987,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS11055;old_locus_tag=PHA56_11060;partial=true;pseudo=true NZ_CP116214.1 Protein Homology CDS 2314211 2314987 . + 0 ID=cds-PHA56_RS11055;Parent=gene-PHA56_RS11055;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2314987,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417351.1;locus_tag=PHA56_RS11055;partial=true;product=XdhC family protein;pseudo=true;transl_table=11 NZ_CP116214.1 RefSeq gene 2315099 2316031 . - . ID=gene-PHA56_RS11060;Name=arcC;gbkey=Gene;gene=arcC;gene_biotype=protein_coding;locus_tag=PHA56_RS11060;old_locus_tag=PHA56_11065 NZ_CP116214.1 Protein Homology CDS 2315099 2316031 . - 0 ID=cds-WP_014229764.1;Parent=gene-PHA56_RS11060;Dbxref=Genbank:WP_014229764.1;Name=WP_014229764.1;Ontology_term=GO:0006520,GO:0008804;gbkey=CDS;gene=arcC;go_function=carbamate kinase activity|0008804||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417350.1;locus_tag=PHA56_RS11060;product=carbamate kinase;protein_id=WP_014229764.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2316044 2317450 . - . ID=gene-PHA56_RS11065;Name=hydA;gbkey=Gene;gene=hydA;gene_biotype=protein_coding;locus_tag=PHA56_RS11065;old_locus_tag=PHA56_11070 NZ_CP116214.1 Protein Homology CDS 2316044 2317450 . - 0 ID=cds-WP_004851908.1;Parent=gene-PHA56_RS11065;Dbxref=Genbank:WP_004851908.1;Name=WP_004851908.1;Ontology_term=GO:0008152,GO:0004157;gbkey=CDS;gene=hydA;go_function=dihydropyrimidinase activity|0004157||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016808846.1;locus_tag=PHA56_RS11065;product=dihydropyrimidinase;protein_id=WP_004851908.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2317501 2318712 . - . ID=gene-PHA56_RS11070;Name=PHA56_RS11070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS11070;old_locus_tag=PHA56_11075 NZ_CP116214.1 Protein Homology CDS 2317501 2318712 . - 0 ID=cds-WP_189087278.1;Parent=gene-PHA56_RS11070;Dbxref=Genbank:WP_189087278.1;Name=WP_189087278.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311772.1;locus_tag=PHA56_RS11070;product=YgeY family selenium metabolism-linked hydrolase;protein_id=WP_189087278.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2318776 2319975 . - . ID=gene-PHA56_RS11075;Name=dpaL;gbkey=Gene;gene=dpaL;gene_biotype=protein_coding;locus_tag=PHA56_RS11075;old_locus_tag=PHA56_11080 NZ_CP116214.1 Protein Homology CDS 2318776 2319975 . - 0 ID=cds-WP_014229762.1;Parent=gene-PHA56_RS11075;Dbxref=Genbank:WP_014229762.1;Name=WP_014229762.1;Ontology_term=GO:0008838,GO:0030170;gbkey=CDS;gene=dpaL;go_function=diaminopropionate ammonia-lyase activity|0008838||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012907465.1;locus_tag=PHA56_RS11075;product=diaminopropionate ammonia-lyase;protein_id=WP_014229762.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2320040 2321227 . - . ID=gene-PHA56_RS11080;Name=ygeW;gbkey=Gene;gene=ygeW;gene_biotype=protein_coding;locus_tag=PHA56_RS11080;old_locus_tag=PHA56_11085 NZ_CP116214.1 Protein Homology CDS 2320040 2321227 . - 0 ID=cds-WP_014838770.1;Parent=gene-PHA56_RS11080;Dbxref=Genbank:WP_014838770.1;Name=WP_014838770.1;gbkey=CDS;gene=ygeW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311770.2;locus_tag=PHA56_RS11080;product=knotted carbamoyltransferase YgeW;protein_id=WP_014838770.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2321718 2323502 . + . ID=gene-PHA56_RS11085;Name=PHA56_RS11085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS11085;old_locus_tag=PHA56_11090 NZ_CP116214.1 Protein Homology CDS 2321718 2323502 . + 0 ID=cds-WP_038424654.1;Parent=gene-PHA56_RS11085;Dbxref=Genbank:WP_038424654.1;Name=WP_038424654.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004121838.1;locus_tag=PHA56_RS11085;product=sigma 54-interacting transcriptional regulator;protein_id=WP_038424654.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2323842 2324012 . + . ID=gene-PHA56_RS11090;Name=PHA56_RS11090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS11090;old_locus_tag=PHA56_11095 NZ_CP116214.1 Protein Homology CDS 2323842 2324012 . + 0 ID=cds-WP_004900141.1;Parent=gene-PHA56_RS11090;Dbxref=Genbank:WP_004900141.1;Name=WP_004900141.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000069461.1;locus_tag=PHA56_RS11090;product=hypothetical protein;protein_id=WP_004900141.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2324009 2324626 . - . ID=gene-PHA56_RS11095;Name=PHA56_RS11095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS11095;old_locus_tag=PHA56_11100 NZ_CP116214.1 Protein Homology CDS 2324009 2324626 . - 0 ID=cds-WP_014229759.1;Parent=gene-PHA56_RS11095;Dbxref=Genbank:WP_014229759.1;Name=WP_014229759.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000092746.1;locus_tag=PHA56_RS11095;product=Fic family protein;protein_id=WP_014229759.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2324795 2325802 . - . ID=gene-PHA56_RS11100;Name=PHA56_RS11100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS11100;old_locus_tag=PHA56_11105 NZ_CP116214.1 Protein Homology CDS 2324795 2325802 . - 0 ID=cds-WP_074193846.1;Parent=gene-PHA56_RS11100;Dbxref=Genbank:WP_074193846.1;Name=WP_074193846.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014838768.1;locus_tag=PHA56_RS11100;product=tyrosine-type recombinase/integrase;protein_id=WP_074193846.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2325878 2326972 . - . ID=gene-PHA56_RS11105;Name=ychF;gbkey=Gene;gene=ychF;gene_biotype=protein_coding;locus_tag=PHA56_RS11105;old_locus_tag=PHA56_11110 NZ_CP116214.1 Protein Homology CDS 2325878 2326972 . - 0 ID=cds-WP_032694087.1;Parent=gene-PHA56_RS11105;Dbxref=Genbank:WP_032694087.1;Name=WP_032694087.1;Ontology_term=GO:0005525;gbkey=CDS;gene=ychF;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001538644.1;locus_tag=PHA56_RS11105;product=redox-regulated ATPase YchF;protein_id=WP_032694087.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2327090 2327674 . - . ID=gene-PHA56_RS11110;Name=pth;gbkey=Gene;gene=pth;gene_biotype=protein_coding;locus_tag=PHA56_RS11110;old_locus_tag=PHA56_11115 NZ_CP116214.1 Protein Homology CDS 2327090 2327674 . - 0 ID=cds-WP_004121831.1;Parent=gene-PHA56_RS11110;Dbxref=Genbank:WP_004121831.1;Name=WP_004121831.1;Ontology_term=GO:0006412,GO:0004045;gbkey=CDS;gene=pth;go_function=aminoacyl-tRNA hydrolase activity|0004045||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910438.1;locus_tag=PHA56_RS11110;product=aminoacyl-tRNA hydrolase;protein_id=WP_004121831.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2327947 2328222 . + . ID=gene-PHA56_RS11115;Name=ychH;gbkey=Gene;gene=ychH;gene_biotype=protein_coding;locus_tag=PHA56_RS11115;old_locus_tag=PHA56_11120 NZ_CP116214.1 Protein Homology CDS 2327947 2328222 . + 0 ID=cds-WP_004103160.1;Parent=gene-PHA56_RS11115;Dbxref=Genbank:WP_004103160.1;Name=WP_004103160.1;gbkey=CDS;gene=ychH;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227540.1;locus_tag=PHA56_RS11115;product=stress-induced protein YchH;protein_id=WP_004103160.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2328432 2329478 . + . ID=gene-PHA56_RS11120;Name=PHA56_RS11120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS11120;old_locus_tag=PHA56_11125 NZ_CP116214.1 Protein Homology CDS 2328432 2329478 . + 0 ID=cds-WP_038424653.1;Parent=gene-PHA56_RS11120;Dbxref=Genbank:WP_038424653.1;Name=WP_038424653.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227539.1;locus_tag=PHA56_RS11120;product=MerR family transcriptional regulator;protein_id=WP_038424653.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2329479 2331158 . - . ID=gene-PHA56_RS11125;Name=dauA;gbkey=Gene;gene=dauA;gene_biotype=protein_coding;locus_tag=PHA56_RS11125;old_locus_tag=PHA56_11130 NZ_CP116214.1 Protein Homology CDS 2329479 2331158 . - 0 ID=cds-WP_025108450.1;Parent=gene-PHA56_RS11125;Dbxref=Genbank:WP_025108450.1;Name=WP_025108450.1;gbkey=CDS;gene=dauA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227538.1;locus_tag=PHA56_RS11125;product=C4-dicarboxylic acid transporter DauA;protein_id=WP_025108450.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2331408 2332355 . - . ID=gene-PHA56_RS11130;Name=prs;gbkey=Gene;gene=prs;gene_biotype=protein_coding;locus_tag=PHA56_RS11130;old_locus_tag=PHA56_11135 NZ_CP116214.1 Protein Homology CDS 2331408 2332355 . - 0 ID=cds-WP_004103157.1;Parent=gene-PHA56_RS11130;Dbxref=Genbank:WP_004103157.1;Name=WP_004103157.1;gbkey=CDS;gene=prs;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910407.1;locus_tag=PHA56_RS11130;product=ribose-phosphate diphosphokinase;protein_id=WP_004103157.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2332538 2333386 . - . ID=gene-PHA56_RS11135;Name=ispE;gbkey=Gene;gene=ispE;gene_biotype=protein_coding;locus_tag=PHA56_RS11135;old_locus_tag=PHA56_11140 NZ_CP116214.1 Protein Homology CDS 2332538 2333386 . - 0 ID=cds-WP_014838765.1;Parent=gene-PHA56_RS11135;Dbxref=Genbank:WP_014838765.1;Name=WP_014838765.1;Ontology_term=GO:0016114,GO:0050515;gbkey=CDS;gene=ispE;go_function=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity|0050515||IEA;go_process=terpenoid biosynthetic process|0016114||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014838765.1;locus_tag=PHA56_RS11135;product=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase;protein_id=WP_014838765.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2333386 2333997 . - . ID=gene-PHA56_RS11140;Name=lolB;gbkey=Gene;gene=lolB;gene_biotype=protein_coding;locus_tag=PHA56_RS11140;old_locus_tag=PHA56_11145 NZ_CP116214.1 Protein Homology CDS 2333386 2333997 . - 0 ID=cds-WP_004851888.1;Parent=gene-PHA56_RS11140;Dbxref=Genbank:WP_004851888.1;Name=WP_004851888.1;Ontology_term=GO:0009306,GO:0008320;gbkey=CDS;gene=lolB;go_function=protein transmembrane transporter activity|0008320||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227535.1;locus_tag=PHA56_RS11140;product=lipoprotein insertase outer membrane protein LolB;protein_id=WP_004851888.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2334271 2335527 . + . ID=gene-PHA56_RS11145;Name=hemA;gbkey=Gene;gene=hemA;gene_biotype=protein_coding;locus_tag=PHA56_RS11145;old_locus_tag=PHA56_11150 NZ_CP116214.1 Protein Homology CDS 2334271 2335527 . + 0 ID=cds-WP_004851885.1;Parent=gene-PHA56_RS11145;Dbxref=Genbank:WP_004851885.1;Name=WP_004851885.1;Ontology_term=GO:0006779,GO:0008883,GO:0005737;gbkey=CDS;gene=hemA;go_component=cytoplasm|0005737||IEA;go_function=glutamyl-tRNA reductase activity|0008883||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041689438.1;locus_tag=PHA56_RS11145;product=glutamyl-tRNA reductase;protein_id=WP_004851885.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2335569 2336651 . + . ID=gene-PHA56_RS11150;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;locus_tag=PHA56_RS11150;old_locus_tag=PHA56_11155 NZ_CP116214.1 Protein Homology CDS 2335569 2336651 . + 0 ID=cds-WP_004851884.1;Parent=gene-PHA56_RS11150;Dbxref=Genbank:WP_004851884.1;Name=WP_004851884.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=prfA;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012132158.1;locus_tag=PHA56_RS11150;product=peptide chain release factor 1;protein_id=WP_004851884.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2336651 2337490 . + . ID=gene-PHA56_RS11155;Name=prmC;gbkey=Gene;gene=prmC;gene_biotype=protein_coding;locus_tag=PHA56_RS11155;old_locus_tag=PHA56_11160 NZ_CP116214.1 Protein Homology CDS 2336651 2337490 . + 0 ID=cds-WP_014229755.1;Parent=gene-PHA56_RS11155;Dbxref=Genbank:WP_014229755.1;Name=WP_014229755.1;Ontology_term=GO:0006412,GO:0018364,GO:0008757;gbkey=CDS;gene=prmC;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=translation|0006412||IEA,peptidyl-glutamine methylation|0018364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004851882.1;locus_tag=PHA56_RS11155;product=peptide chain release factor N(5)-glutamine methyltransferase;protein_id=WP_014229755.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2337487 2337879 . + . ID=gene-PHA56_RS11160;Name=sirB2;gbkey=Gene;gene=sirB2;gene_biotype=protein_coding;locus_tag=PHA56_RS11160;old_locus_tag=PHA56_11165 NZ_CP116214.1 Protein Homology CDS 2337487 2337879 . + 0 ID=cds-WP_004851880.1;Parent=gene-PHA56_RS11160;Dbxref=Genbank:WP_004851880.1;Name=WP_004851880.1;gbkey=CDS;gene=sirB2;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227531.1;locus_tag=PHA56_RS11160;product=invasion regulator SirB2;protein_id=WP_004851880.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2337883 2338695 . + . ID=gene-PHA56_RS11165;Name=sirB1;gbkey=Gene;gene=sirB1;gene_biotype=protein_coding;locus_tag=PHA56_RS11165;old_locus_tag=PHA56_11170 NZ_CP116214.1 Protein Homology CDS 2337883 2338695 . + 0 ID=cds-WP_004851879.1;Parent=gene-PHA56_RS11165;Dbxref=Genbank:WP_004851879.1;Name=WP_004851879.1;gbkey=CDS;gene=sirB1;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227530.1;locus_tag=PHA56_RS11165;product=invasion regulator SirB1;protein_id=WP_004851879.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2338735 2339589 . + . ID=gene-PHA56_RS11170;Name=kdsA;gbkey=Gene;gene=kdsA;gene_biotype=protein_coding;locus_tag=PHA56_RS11170;old_locus_tag=PHA56_11175 NZ_CP116214.1 Protein Homology CDS 2338735 2339589 . + 0 ID=cds-WP_004103146.1;Parent=gene-PHA56_RS11170;Dbxref=Genbank:WP_004103146.1;Name=WP_004103146.1;Ontology_term=GO:0008676;gbkey=CDS;gene=kdsA;go_function=3-deoxy-8-phosphooctulonate synthase activity|0008676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126202.1;locus_tag=PHA56_RS11170;product=3-deoxy-8-phosphooctulonate synthase;protein_id=WP_004103146.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2339678 2340778 . - . ID=gene-PHA56_RS11175;Name=chaA;gbkey=Gene;gene=chaA;gene_biotype=protein_coding;locus_tag=PHA56_RS11175;old_locus_tag=PHA56_11180 NZ_CP116214.1 Protein Homology CDS 2339678 2340778 . - 0 ID=cds-WP_004121802.1;Parent=gene-PHA56_RS11175;Dbxref=Genbank:WP_004121802.1;Name=WP_004121802.1;gbkey=CDS;gene=chaA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227528.1;locus_tag=PHA56_RS11175;product=sodium-potassium/proton antiporter ChaA;protein_id=WP_004121802.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2341044 2341274 . + . ID=gene-PHA56_RS11180;Name=chaB;gbkey=Gene;gene=chaB;gene_biotype=protein_coding;locus_tag=PHA56_RS11180;old_locus_tag=PHA56_11185 NZ_CP116214.1 Protein Homology CDS 2341044 2341274 . + 0 ID=cds-WP_009651994.1;Parent=gene-PHA56_RS11180;Dbxref=Genbank:WP_009651994.1;Name=WP_009651994.1;gbkey=CDS;gene=chaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882350.1;locus_tag=PHA56_RS11180;product=putative cation transport regulator ChaB;protein_id=WP_009651994.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2341425 2342105 . + . ID=gene-PHA56_RS11185;Name=PHA56_RS11185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS11185;old_locus_tag=PHA56_11190 NZ_CP116214.1 Protein Homology CDS 2341425 2342105 . + 0 ID=cds-WP_004851874.1;Parent=gene-PHA56_RS11185;Dbxref=Genbank:WP_004851874.1;Name=WP_004851874.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227526.1;locus_tag=PHA56_RS11185;product=gamma-glutamylcyclotransferase;protein_id=WP_004851874.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2342141 2342383 . - . ID=gene-PHA56_RS11190;Name=PHA56_RS11190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS11190;old_locus_tag=PHA56_11195 NZ_CP116214.1 Protein Homology CDS 2342141 2342383 . - 0 ID=cds-WP_002910387.1;Parent=gene-PHA56_RS11190;Dbxref=Genbank:WP_002910387.1;Name=WP_002910387.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227525.1;locus_tag=PHA56_RS11190;product=DUF1883 domain-containing protein;protein_id=WP_002910387.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2342622 2342975 . - . ID=gene-PHA56_RS11195;Name=PHA56_RS11195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS11195;old_locus_tag=PHA56_11200 NZ_CP116214.1 Protein Homology CDS 2342622 2342975 . - 0 ID=cds-WP_014229754.1;Parent=gene-PHA56_RS11195;Dbxref=Genbank:WP_014229754.1;Name=WP_014229754.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460725.1;locus_tag=PHA56_RS11195;product=DsrE/DsrF/TusD sulfur relay family protein;protein_id=WP_014229754.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2343044 2344234 . + . ID=gene-PHA56_RS11200;Name=nasR;gbkey=Gene;gene=nasR;gene_biotype=protein_coding;locus_tag=PHA56_RS11200;old_locus_tag=PHA56_11205 NZ_CP116214.1 Protein Homology CDS 2343044 2344234 . + 0 ID=cds-WP_014838764.1;Parent=gene-PHA56_RS11200;Dbxref=Genbank:WP_014838764.1;Name=WP_014838764.1;Note=NasR is a transcription antiterminator and transcriptional regulator for the nasFEDCBA operon;Ontology_term=GO:0031564,GO:0003723;gbkey=CDS;gene=nasR;go_function=RNA binding|0003723||IEA;go_process=transcription antitermination|0031564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004133379.1;locus_tag=PHA56_RS11200;product=nitrate regulatory protein NasR;protein_id=WP_014838764.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2344481 2345737 . + . ID=gene-PHA56_RS11205;Name=PHA56_RS11205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS11205;old_locus_tag=PHA56_11210 NZ_CP116214.1 Protein Homology CDS 2344481 2345737 . + 0 ID=cds-WP_014838763.1;Parent=gene-PHA56_RS11205;Dbxref=Genbank:WP_014838763.1;Name=WP_014838763.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227521.1;locus_tag=PHA56_RS11205;product=CmpA/NrtA family ABC transporter substrate-binding protein;protein_id=WP_014838763.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2345739 2346623 . + . ID=gene-PHA56_RS11210;Name=ntrB;gbkey=Gene;gene=ntrB;gene_biotype=protein_coding;locus_tag=PHA56_RS11210;old_locus_tag=PHA56_11215 NZ_CP116214.1 Protein Homology CDS 2345739 2346623 . + 0 ID=cds-WP_014838762.1;Parent=gene-PHA56_RS11210;Dbxref=Genbank:WP_014838762.1;Name=WP_014838762.1;Ontology_term=GO:0015706,GO:0015414,GO:0005886,GO:0055052;gbkey=CDS;gene=ntrB;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type nitrate transporter activity|0015414||IEA;go_process=nitrate transmembrane transport|0015706||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014838762.1;locus_tag=PHA56_RS11210;product=nitrate ABC transporter permease;protein_id=WP_014838762.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2346634 2347422 . + . ID=gene-PHA56_RS11215;Name=PHA56_RS11215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS11215;old_locus_tag=PHA56_11220 NZ_CP116214.1 Protein Homology CDS 2346634 2347422 . + 0 ID=cds-WP_014838761.1;Parent=gene-PHA56_RS11215;Dbxref=Genbank:WP_014838761.1;Name=WP_014838761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227518.1;locus_tag=PHA56_RS11215;product=ABC transporter ATP-binding protein;protein_id=WP_014838761.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2347432 2351502 . + . ID=gene-PHA56_RS11220;Name=nirB;gbkey=Gene;gene=nirB;gene_biotype=protein_coding;locus_tag=PHA56_RS11220;old_locus_tag=PHA56_11225 NZ_CP116214.1 Protein Homology CDS 2347432 2351502 . + 0 ID=cds-WP_119834483.1;Parent=gene-PHA56_RS11220;Dbxref=Genbank:WP_119834483.1;Name=WP_119834483.1;Ontology_term=GO:0042128,GO:0008942,GO:0016491,GO:0050660,GO:0050661;gbkey=CDS;gene=nirB;go_function=nitrite reductase [NAD(P)H] activity|0008942||IEA,oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;go_process=nitrate assimilation|0042128||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008804397.1;locus_tag=PHA56_RS11220;product=nitrite reductase large subunit NirB;protein_id=WP_119834483.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2351502 2354102 . + . ID=gene-PHA56_RS11225;Name=PHA56_RS11225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS11225;old_locus_tag=PHA56_11230 NZ_CP116214.1 Protein Homology CDS 2351502 2354102 . + 0 ID=cds-WP_014838759.1;Parent=gene-PHA56_RS11225;Dbxref=Genbank:WP_014838759.1;Name=WP_014838759.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227515.1;locus_tag=PHA56_RS11225;product=nitrate reductase;protein_id=WP_014838759.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2354205 2355584 . + . ID=gene-PHA56_RS11230;Name=PHA56_RS11230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS11230;old_locus_tag=PHA56_11235 NZ_CP116214.1 Protein Homology CDS 2354205 2355584 . + 0 ID=cds-WP_014838758.1;Parent=gene-PHA56_RS11230;Dbxref=Genbank:WP_014838758.1;Name=WP_014838758.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004113649.1;locus_tag=PHA56_RS11230;product=YchO/YchP family invasin;protein_id=WP_014838758.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2355581 2356231 . - . ID=gene-PHA56_RS11235;Name=narL;gbkey=Gene;gene=narL;gene_biotype=protein_coding;locus_tag=PHA56_RS11235;old_locus_tag=PHA56_11240 NZ_CP116214.1 Protein Homology CDS 2355581 2356231 . - 0 ID=cds-WP_004103129.1;Parent=gene-PHA56_RS11235;Dbxref=Genbank:WP_004103129.1;Name=WP_004103129.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=narL;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227513.1;locus_tag=PHA56_RS11235;product=two-component system response regulator NarL;protein_id=WP_004103129.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2356242 2358020 . - . ID=gene-PHA56_RS11240;Name=narX;gbkey=Gene;gene=narX;gene_biotype=protein_coding;locus_tag=PHA56_RS11240;old_locus_tag=PHA56_11245 NZ_CP116214.1 Protein Homology CDS 2356242 2358020 . - 0 ID=cds-WP_014838757.1;Parent=gene-PHA56_RS11240;Dbxref=Genbank:WP_014838757.1;Name=WP_014838757.1;Ontology_term=GO:0000160,GO:0000155,GO:0046983,GO:0016020;gbkey=CDS;gene=narX;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein dimerization activity|0046983||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227512.1;locus_tag=PHA56_RS11240;product=nitrate/nitrite two-component system sensor histidine kinase NarX;protein_id=WP_014838757.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2358332 2359720 . + . ID=gene-PHA56_RS11245;Name=PHA56_RS11245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS11245;old_locus_tag=PHA56_11250 NZ_CP116214.1 Protein Homology CDS 2358332 2359720 . + 0 ID=cds-WP_014229746.1;Parent=gene-PHA56_RS11245;Dbxref=Genbank:WP_014229746.1;Name=WP_014229746.1;Ontology_term=GO:0015707,GO:0015514,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=nitrite efflux transmembrane transporter activity|0015514||IEA;go_process=nitrite transport|0015707||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227511.1;locus_tag=PHA56_RS11245;product=NarK family nitrate/nitrite MFS transporter;protein_id=WP_014229746.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2360117 2363860 . + . ID=gene-PHA56_RS11250;Name=PHA56_RS11250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS11250;old_locus_tag=PHA56_11255 NZ_CP116214.1 Protein Homology CDS 2360117 2363860 . + 0 ID=cds-WP_014229745.1;Parent=gene-PHA56_RS11250;Dbxref=Genbank:WP_014229745.1;Name=WP_014229745.1;Ontology_term=GO:0009061,GO:0008940,GO:0009325;gbkey=CDS;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic respiration|0009061||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227509.1;locus_tag=PHA56_RS11250;product=nitrate reductase subunit alpha;protein_id=WP_014229745.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2363857 2365392 . + . ID=gene-PHA56_RS11255;Name=narH;gbkey=Gene;gene=narH;gene_biotype=protein_coding;locus_tag=PHA56_RS11255;old_locus_tag=PHA56_11260 NZ_CP116214.1 Protein Homology CDS 2363857 2365392 . + 0 ID=cds-WP_014838755.1;Parent=gene-PHA56_RS11255;Dbxref=Genbank:WP_014838755.1;Name=WP_014838755.1;Ontology_term=GO:0009061,GO:0008940,GO:0009325;gbkey=CDS;gene=narH;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic respiration|0009061||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013366053.1;locus_tag=PHA56_RS11255;product=nitrate reductase subunit beta;protein_id=WP_014838755.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2365389 2366099 . + . ID=gene-PHA56_RS11260;Name=narJ;gbkey=Gene;gene=narJ;gene_biotype=protein_coding;locus_tag=PHA56_RS11260;old_locus_tag=PHA56_11265 NZ_CP116214.1 Protein Homology CDS 2365389 2366099 . + 0 ID=cds-WP_038424651.1;Parent=gene-PHA56_RS11260;Dbxref=Genbank:WP_038424651.1;Name=WP_038424651.1;Ontology_term=GO:0051131,GO:0051082;gbkey=CDS;gene=narJ;go_function=unfolded protein binding|0051082||IEA;go_process=chaperone-mediated protein complex assembly|0051131||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227507.1;locus_tag=PHA56_RS11260;product=nitrate reductase molybdenum cofactor assembly chaperone;protein_id=WP_038424651.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2366099 2366776 . + . ID=gene-PHA56_RS11265;Name=narI;gbkey=Gene;gene=narI;gene_biotype=protein_coding;locus_tag=PHA56_RS11265;old_locus_tag=PHA56_11270 NZ_CP116214.1 Protein Homology CDS 2366099 2366776 . + 0 ID=cds-WP_014229742.1;Parent=gene-PHA56_RS11265;Dbxref=Genbank:WP_014229742.1;Name=WP_014229742.1;Ontology_term=GO:0019645,GO:0008940,GO:0009325;gbkey=CDS;gene=narI;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227506.1;locus_tag=PHA56_RS11265;product=respiratory nitrate reductase subunit gamma;protein_id=WP_014229742.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2366946 2367076 . - . ID=gene-PHA56_RS11270;Name=PHA56_RS11270;gbkey=Gene;gene_biotype=ncRNA;locus_tag=PHA56_RS11270;old_locus_tag=PHA56_11275 NZ_CP116214.1 cmsearch ncRNA 2366946 2367076 . - . ID=rna-PHA56_RS11270;Parent=gene-PHA56_RS11270;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA56_RS11270;product=RtT sRNA NZ_CP116214.1 cmsearch exon 2366946 2367076 . - . ID=exon-PHA56_RS11270-1;Parent=rna-PHA56_RS11270;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA56_RS11270;product=RtT sRNA NZ_CP116214.1 RefSeq gene 2367121 2367251 . - . ID=gene-PHA56_RS11275;Name=PHA56_RS11275;gbkey=Gene;gene_biotype=ncRNA;locus_tag=PHA56_RS11275;old_locus_tag=PHA56_11280 NZ_CP116214.1 cmsearch ncRNA 2367121 2367251 . - . ID=rna-PHA56_RS11275;Parent=gene-PHA56_RS11275;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA56_RS11275;product=RtT sRNA NZ_CP116214.1 cmsearch exon 2367121 2367251 . - . ID=exon-PHA56_RS11275-1;Parent=rna-PHA56_RS11275;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA56_RS11275;product=RtT sRNA NZ_CP116214.1 RefSeq gene 2367296 2367380 . - . ID=gene-PHA56_RS11280;Name=PHA56_RS11280;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA56_RS11280;old_locus_tag=PHA56_11285 NZ_CP116214.1 tRNAscan-SE tRNA 2367296 2367380 . - . ID=rna-PHA56_RS11280;Parent=gene-PHA56_RS11280;anticodon=(pos:complement(2367344..2367346));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS11280;product=tRNA-Tyr NZ_CP116214.1 tRNAscan-SE exon 2367296 2367380 . - . ID=exon-PHA56_RS11280-1;Parent=rna-PHA56_RS11280;anticodon=(pos:complement(2367344..2367346));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS11280;product=tRNA-Tyr NZ_CP116214.1 RefSeq gene 2367416 2367547 . - . ID=gene-PHA56_RS11285;Name=PHA56_RS11285;gbkey=Gene;gene_biotype=ncRNA;locus_tag=PHA56_RS11285;old_locus_tag=PHA56_11290 NZ_CP116214.1 cmsearch ncRNA 2367416 2367547 . - . ID=rna-PHA56_RS11285;Parent=gene-PHA56_RS11285;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA56_RS11285;product=RtT sRNA NZ_CP116214.1 cmsearch exon 2367416 2367547 . - . ID=exon-PHA56_RS11285-1;Parent=rna-PHA56_RS11285;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA56_RS11285;product=RtT sRNA NZ_CP116214.1 RefSeq gene 2367591 2367675 . - . ID=gene-PHA56_RS11290;Name=PHA56_RS11290;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA56_RS11290;old_locus_tag=PHA56_11295 NZ_CP116214.1 tRNAscan-SE tRNA 2367591 2367675 . - . ID=rna-PHA56_RS11290;Parent=gene-PHA56_RS11290;anticodon=(pos:complement(2367639..2367641));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS11290;product=tRNA-Tyr NZ_CP116214.1 tRNAscan-SE exon 2367591 2367675 . - . ID=exon-PHA56_RS11290-1;Parent=rna-PHA56_RS11290;anticodon=(pos:complement(2367639..2367641));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS11290;product=tRNA-Tyr NZ_CP116214.1 RefSeq gene 2367832 2368674 . - . ID=gene-PHA56_RS11295;Name=purU;gbkey=Gene;gene=purU;gene_biotype=protein_coding;locus_tag=PHA56_RS11295;old_locus_tag=PHA56_11300 NZ_CP116214.1 Protein Homology CDS 2367832 2368674 . - 0 ID=cds-WP_004121732.1;Parent=gene-PHA56_RS11295;Dbxref=Genbank:WP_004121732.1;Name=WP_004121732.1;Ontology_term=GO:0009152,GO:0008864;gbkey=CDS;gene=purU;go_function=formyltetrahydrofolate deformylase activity|0008864||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227503.1;locus_tag=PHA56_RS11295;product=formyltetrahydrofolate deformylase;protein_id=WP_004121732.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2368717 2369175 . - . ID=gene-PHA56_RS11300;Name=PHA56_RS11300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS11300;old_locus_tag=PHA56_11305 NZ_CP116214.1 Protein Homology CDS 2368717 2369175 . - 0 ID=cds-WP_014229741.1;Parent=gene-PHA56_RS11300;Dbxref=Genbank:WP_014229741.1;Name=WP_014229741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008804406.1;locus_tag=PHA56_RS11300;product=YchJ family protein;protein_id=WP_014229741.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2369288 2370196 . + . ID=gene-PHA56_RS11305;Name=rssA;gbkey=Gene;gene=rssA;gene_biotype=protein_coding;locus_tag=PHA56_RS11305;old_locus_tag=PHA56_11310 NZ_CP116214.1 Protein Homology CDS 2369288 2370196 . + 0 ID=cds-WP_014229740.1;Parent=gene-PHA56_RS11305;Dbxref=Genbank:WP_014229740.1;Name=WP_014229740.1;Ontology_term=GO:0006629,GO:0004622;gbkey=CDS;gene=rssA;go_function=lysophospholipase activity|0004622||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004851840.1;locus_tag=PHA56_RS11305;product=patatin-like phospholipase RssA;protein_id=WP_014229740.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2370277 2371290 . + . ID=gene-PHA56_RS11310;Name=rssB;gbkey=Gene;gene=rssB;gene_biotype=protein_coding;locus_tag=PHA56_RS11310;old_locus_tag=PHA56_11315 NZ_CP116214.1 Protein Homology CDS 2370277 2371290 . + 0 ID=cds-WP_004851838.1;Parent=gene-PHA56_RS11310;Dbxref=Genbank:WP_004851838.1;Name=WP_004851838.1;Ontology_term=GO:0000160;gbkey=CDS;gene=rssB;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227500.1;locus_tag=PHA56_RS11310;product=two-component system response regulator RssB;protein_id=WP_004851838.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2371488 2372390 . + . ID=gene-PHA56_RS11315;Name=galU;gbkey=Gene;gene=galU;gene_biotype=protein_coding;locus_tag=PHA56_RS11315;old_locus_tag=PHA56_11320 NZ_CP116214.1 Protein Homology CDS 2371488 2372390 . + 0 ID=cds-WP_004851836.1;Parent=gene-PHA56_RS11315;Dbxref=Genbank:WP_004851836.1;Name=WP_004851836.1;gbkey=CDS;gene=galU;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227499.1;locus_tag=PHA56_RS11315;product=UTP--glucose-1-phosphate uridylyltransferase GalU;protein_id=WP_004851836.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2372525 2372932 . - . ID=gene-PHA56_RS11320;Name=hns;gbkey=Gene;gene=hns;gene_biotype=protein_coding;locus_tag=PHA56_RS11320;old_locus_tag=PHA56_11325 NZ_CP116214.1 Protein Homology CDS 2372525 2372932 . - 0 ID=cds-WP_004121719.1;Parent=gene-PHA56_RS11320;Dbxref=Genbank:WP_004121719.1;Name=WP_004121719.1;gbkey=CDS;gene=hns;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227498.1;locus_tag=PHA56_RS11320;product=DNA-binding transcriptional regulator H-NS;protein_id=WP_004121719.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2373488 2374105 . + . ID=gene-PHA56_RS11325;Name=tdk;gbkey=Gene;gene=tdk;gene_biotype=protein_coding;locus_tag=PHA56_RS11325;old_locus_tag=PHA56_11330 NZ_CP116214.1 Protein Homology CDS 2373488 2374105 . + 0 ID=cds-WP_032720584.1;Parent=gene-PHA56_RS11325;Dbxref=Genbank:WP_032720584.1;Name=WP_032720584.1;gbkey=CDS;gene=tdk;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229739.1;locus_tag=PHA56_RS11325;product=thymidine kinase;protein_id=WP_032720584.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2374284 2376959 . - . ID=gene-PHA56_RS11330;Name=adhE;gbkey=Gene;gene=adhE;gene_biotype=protein_coding;gene_synonym=adhC;locus_tag=PHA56_RS11330;old_locus_tag=PHA56_11335 NZ_CP116214.1 Protein Homology CDS 2374284 2376959 . - 0 ID=cds-WP_014229738.1;Parent=gene-PHA56_RS11330;Dbxref=Genbank:WP_014229738.1;Name=WP_014229738.1;Ontology_term=GO:0006066,GO:0015976,GO:0004022,GO:0016620,GO:0046872;gbkey=CDS;gene=adhE;go_function=alcohol dehydrogenase (NAD+) activity|0004022||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,metal ion binding|0046872||IEA;go_process=alcohol metabolic process|0006066||IEA,carbon utilization|0015976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227495.1;locus_tag=PHA56_RS11330;product=bifunctional acetaldehyde-CoA/alcohol dehydrogenase;protein_id=WP_014229738.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2377440 2378087 . + . ID=gene-PHA56_RS11335;Name=PHA56_RS11335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS11335;old_locus_tag=PHA56_11340 NZ_CP116214.1 Protein Homology CDS 2377440 2378087 . + 0 ID=cds-WP_004851832.1;Parent=gene-PHA56_RS11335;Dbxref=Genbank:WP_004851832.1;Name=WP_004851832.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227493.1;locus_tag=PHA56_RS11335;product=YchE family NAAT transporter;protein_id=WP_004851832.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2378833 2380464 . + . ID=gene-PHA56_RS11340;Name=oppA;gbkey=Gene;gene=oppA;gene_biotype=protein_coding;locus_tag=PHA56_RS11340;old_locus_tag=PHA56_11345 NZ_CP116214.1 Protein Homology CDS 2378833 2380464 . + 0 ID=cds-WP_119834485.1;Parent=gene-PHA56_RS11340;Dbxref=Genbank:WP_119834485.1;Name=WP_119834485.1;Ontology_term=GO:0055085,GO:0043190;gbkey=CDS;gene=oppA;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227491.1;locus_tag=PHA56_RS11340;product=oligopeptide ABC transporter substrate-binding protein OppA;protein_id=WP_119834485.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2380553 2381473 . + . ID=gene-PHA56_RS11345;Name=oppB;gbkey=Gene;gene=oppB;gene_biotype=protein_coding;locus_tag=PHA56_RS11345;old_locus_tag=PHA56_11350 NZ_CP116214.1 Protein Homology CDS 2380553 2381473 . + 0 ID=cds-WP_004851825.1;Parent=gene-PHA56_RS11345;Dbxref=Genbank:WP_004851825.1;Name=WP_004851825.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=oppB;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126405.1;locus_tag=PHA56_RS11345;product=oligopeptide ABC transporter permease OppB;protein_id=WP_004851825.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2381488 2382396 . + . ID=gene-PHA56_RS11350;Name=oppC;gbkey=Gene;gene=oppC;gene_biotype=protein_coding;locus_tag=PHA56_RS11350;old_locus_tag=PHA56_11355 NZ_CP116214.1 Protein Homology CDS 2381488 2382396 . + 0 ID=cds-WP_004121697.1;Parent=gene-PHA56_RS11350;Dbxref=Genbank:WP_004121697.1;Name=WP_004121697.1;Ontology_term=GO:0055085;gbkey=CDS;gene=oppC;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000979653.1;locus_tag=PHA56_RS11350;product=oligopeptide ABC transporter permease OppC;protein_id=WP_004121697.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2382408 2383421 . + . ID=gene-PHA56_RS11355;Name=PHA56_RS11355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS11355;old_locus_tag=PHA56_11360 NZ_CP116214.1 Protein Homology CDS 2382408 2383421 . + 0 ID=cds-WP_004851823.1;Parent=gene-PHA56_RS11355;Dbxref=Genbank:WP_004851823.1;Name=WP_004851823.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227488.1;locus_tag=PHA56_RS11355;product=ABC transporter ATP-binding protein;protein_id=WP_004851823.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2383418 2384422 . + . ID=gene-PHA56_RS11360;Name=oppF;gbkey=Gene;gene=oppF;gene_biotype=protein_coding;locus_tag=PHA56_RS11360;old_locus_tag=PHA56_11365 NZ_CP116214.1 Protein Homology CDS 2383418 2384422 . + 0 ID=cds-WP_004851821.1;Parent=gene-PHA56_RS11360;Dbxref=Genbank:WP_004851821.1;Name=WP_004851821.1;gbkey=CDS;gene=oppF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016506804.1;locus_tag=PHA56_RS11360;product=murein tripeptide/oligopeptide ABC transporter ATP-binding protein OppF;protein_id=WP_004851821.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2384468 2385304 . + . ID=gene-PHA56_RS11365;Name=PHA56_RS11365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS11365;old_locus_tag=PHA56_11370 NZ_CP116214.1 Protein Homology CDS 2384468 2385304 . + 0 ID=cds-WP_032720585.1;Parent=gene-PHA56_RS11365;Dbxref=Genbank:WP_032720585.1;Name=WP_032720585.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014838749.1;locus_tag=PHA56_RS11365;product=ion transporter;protein_id=WP_032720585.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2385379 2385708 . - . ID=gene-PHA56_RS11370;Name=PHA56_RS11370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS11370;old_locus_tag=PHA56_11375 NZ_CP116214.1 Protein Homology CDS 2385379 2385708 . - 0 ID=cds-WP_004103097.1;Parent=gene-PHA56_RS11370;Dbxref=Genbank:WP_004103097.1;Name=WP_004103097.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227485.1;locus_tag=PHA56_RS11370;product=HI1450 family dsDNA-mimic protein;protein_id=WP_004103097.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2385743 2387203 . - . ID=gene-PHA56_RS11375;Name=cls;gbkey=Gene;gene=cls;gene_biotype=protein_coding;locus_tag=PHA56_RS11375;old_locus_tag=PHA56_11380 NZ_CP116214.1 Protein Homology CDS 2385743 2387203 . - 0 ID=cds-WP_009653730.1;Parent=gene-PHA56_RS11375;Dbxref=Genbank:WP_009653730.1;Name=WP_009653730.1;Ontology_term=GO:0032049,GO:0008808;gbkey=CDS;gene=cls;go_function=cardiolipin synthase activity|0008808||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126413.1;locus_tag=PHA56_RS11375;product=cardiolipin synthase;protein_id=WP_009653730.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2387347 2387520 . + . ID=gene-PHA56_RS11380;Name=PHA56_RS11380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS11380;old_locus_tag=PHA56_11385 NZ_CP116214.1 Protein Homology CDS 2387347 2387520 . + 0 ID=cds-WP_004851815.1;Parent=gene-PHA56_RS11380;Dbxref=Genbank:WP_004851815.1;Name=WP_004851815.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004121687.1;locus_tag=PHA56_RS11380;product=YciY family protein;protein_id=WP_004851815.1;transl_table=11 NZ_CP116214.1 RefSeq pseudogene 2387803 2388903 . + . ID=gene-PHA56_RS11385;Name=PHA56_RS11385;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS11385;old_locus_tag=PHA56_11390;pseudo=true NZ_CP116214.1 Protein Homology CDS 2387803 2388903 . + 0 ID=cds-PHA56_RS11385;Parent=gene-PHA56_RS11385;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019705118.1;locus_tag=PHA56_RS11385;product=NADH:flavin oxidoreductase/NADH oxidase;pseudo=true;transl_table=11 NZ_CP116214.1 RefSeq gene 2389115 2389411 . - . ID=gene-PHA56_RS11390;Name=PHA56_RS11390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS11390;old_locus_tag=PHA56_11395 NZ_CP116214.1 Protein Homology CDS 2389115 2389411 . - 0 ID=cds-WP_004103089.1;Parent=gene-PHA56_RS11390;Dbxref=Genbank:WP_004103089.1;Name=WP_004103089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227479.1;locus_tag=PHA56_RS11390;product=YciI family protein;protein_id=WP_004103089.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2389623 2390360 . + . ID=gene-PHA56_RS11395;Name=tonB;gbkey=Gene;gene=tonB;gene_biotype=protein_coding;locus_tag=PHA56_RS11395;old_locus_tag=PHA56_11400 NZ_CP116214.1 Protein Homology CDS 2389623 2390360 . + 0 ID=cds-WP_038424648.1;Parent=gene-PHA56_RS11395;Dbxref=Genbank:WP_038424648.1;Name=WP_038424648.1;Ontology_term=GO:0015891,GO:0055085,GO:0015343,GO:0030288;gbkey=CDS;gene=tonB;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=siderophore-iron transmembrane transporter activity|0015343||IEA;go_process=siderophore transport|0015891||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020317059.1;locus_tag=PHA56_RS11395;product=TonB system transport protein TonB;protein_id=WP_038424648.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2390380 2391252 . - . ID=gene-PHA56_RS11400;Name=PHA56_RS11400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS11400;old_locus_tag=PHA56_11405 NZ_CP116214.1 Protein Homology CDS 2390380 2391252 . - 0 ID=cds-WP_004851808.1;Parent=gene-PHA56_RS11400;Dbxref=Genbank:WP_004851808.1;Name=WP_004851808.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004851808.1;locus_tag=PHA56_RS11400;product=fructosamine kinase family protein;protein_id=WP_004851808.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2391359 2391643 . - . ID=gene-PHA56_RS11405;Name=ghoS;gbkey=Gene;gene=ghoS;gene_biotype=protein_coding;locus_tag=PHA56_RS11405;old_locus_tag=PHA56_11410 NZ_CP116214.1 Protein Homology CDS 2391359 2391643 . - 0 ID=cds-WP_009653733.1;Parent=gene-PHA56_RS11405;Dbxref=Genbank:WP_009653733.1;Name=WP_009653733.1;Ontology_term=GO:0004521;gbkey=CDS;gene=ghoS;go_function=endoribonuclease activity|0004521||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227476.1;locus_tag=PHA56_RS11405;product=type V toxin-antitoxin system endoribonuclease antitoxin GhoS;protein_id=WP_009653733.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2391738 2392667 . - . ID=gene-PHA56_RS11410;Name=pfkB;gbkey=Gene;gene=pfkB;gene_biotype=protein_coding;locus_tag=PHA56_RS11410;old_locus_tag=PHA56_11415 NZ_CP116214.1 Protein Homology CDS 2391738 2392667 . - 0 ID=cds-WP_014229733.1;Parent=gene-PHA56_RS11410;Dbxref=Genbank:WP_014229733.1;Name=WP_014229733.1;Ontology_term=GO:0005975,GO:0016773;gbkey=CDS;gene=pfkB;go_function=phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017145685.1;locus_tag=PHA56_RS11410;product=6-phosphofructokinase II;protein_id=WP_014229733.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2392957 2393715 . + . ID=gene-PHA56_RS11415;Name=PHA56_RS11415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS11415;old_locus_tag=PHA56_11420 NZ_CP116214.1 Protein Homology CDS 2392957 2393715 . + 0 ID=cds-WP_004851801.1;Parent=gene-PHA56_RS11415;Dbxref=Genbank:WP_004851801.1;Name=WP_004851801.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310455.1;locus_tag=PHA56_RS11415;product=YdiY family protein;protein_id=WP_004851801.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2393986 2394219 . + . ID=gene-PHA56_RS11420;Name=PHA56_RS11420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS11420;old_locus_tag=PHA56_11425 NZ_CP116214.1 Protein Homology CDS 2393986 2394219 . + 0 ID=cds-WP_004851800.1;Parent=gene-PHA56_RS11420;Dbxref=Genbank:WP_004851800.1;Name=WP_004851800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015958606.1;locus_tag=PHA56_RS11420;product=hypothetical protein;protein_id=WP_004851800.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2394240 2394452 . - . ID=gene-PHA56_RS11425;Name=PHA56_RS11425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS11425;old_locus_tag=PHA56_11430 NZ_CP116214.1 GeneMarkS-2+ CDS 2394240 2394452 . - 0 ID=cds-WP_075208473.1;Parent=gene-PHA56_RS11425;Dbxref=Genbank:WP_075208473.1;Name=WP_075208473.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PHA56_RS11425;product=hypothetical protein;protein_id=WP_075208473.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2394669 2396597 . + . ID=gene-PHA56_RS11430;Name=thrS;gbkey=Gene;gene=thrS;gene_biotype=protein_coding;locus_tag=PHA56_RS11430;old_locus_tag=PHA56_11435 NZ_CP116214.1 Protein Homology CDS 2394669 2396597 . + 0 ID=cds-WP_004102966.1;Parent=gene-PHA56_RS11430;Dbxref=Genbank:WP_004102966.1;Name=WP_004102966.1;Ontology_term=GO:0006435,GO:0004829,GO:0005737;gbkey=CDS;gene=thrS;go_component=cytoplasm|0005737||IEA;go_function=threonine-tRNA ligase activity|0004829||IEA;go_process=threonyl-tRNA aminoacylation|0006435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006894721.1;locus_tag=PHA56_RS11430;product=threonine--tRNA ligase;protein_id=WP_004102966.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2396601 2397143 . + . ID=gene-PHA56_RS11435;Name=infC;gbkey=Gene;gene=infC;gene_biotype=protein_coding;locus_tag=PHA56_RS11435;old_locus_tag=PHA56_11440 NZ_CP116214.1 Protein Homology CDS 2396601 2397143 . + 0 ID=cds-WP_052746887.1;Parent=gene-PHA56_RS11435;Dbxref=Genbank:WP_052746887.1;Name=WP_052746887.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infC;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310452.1;locus_tag=PHA56_RS11435;product=translation initiation factor IF-3;protein_id=WP_052746887.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2397240 2397437 . + . ID=gene-PHA56_RS11440;Name=rpmI;gbkey=Gene;gene=rpmI;gene_biotype=protein_coding;locus_tag=PHA56_RS11440;old_locus_tag=PHA56_11445 NZ_CP116214.1 Protein Homology CDS 2397240 2397437 . + 0 ID=cds-WP_001124225.1;Parent=gene-PHA56_RS11440;Dbxref=Genbank:WP_001124225.1;Name=WP_001124225.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmI;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006708231.1;locus_tag=PHA56_RS11440;product=50S ribosomal protein L35;protein_id=WP_001124225.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2397488 2397844 . + . ID=gene-PHA56_RS11445;Name=rplT;gbkey=Gene;gene=rplT;gene_biotype=protein_coding;locus_tag=PHA56_RS11445;old_locus_tag=PHA56_11450 NZ_CP116214.1 Protein Homology CDS 2397488 2397844 . + 0 ID=cds-WP_004102963.1;Parent=gene-PHA56_RS11445;Dbxref=Genbank:WP_004102963.1;Name=WP_004102963.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0005840;gbkey=CDS;gene=rplT;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009635878.1;locus_tag=PHA56_RS11445;product=50S ribosomal protein L20;protein_id=WP_004102963.1;transl_table=11 NZ_CP116214.1 cmsearch sequence_feature 2397963 2398088 . + . ID=id-NZ_CP116214.1:2397963..2398088;Dbxref=RFAM:RF01859;Note=Phe leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.1 NZ_CP116214.1 RefSeq gene 2397968 2398012 . + . ID=gene-PHA56_RS11450;Name=pheM;gbkey=Gene;gene=pheM;gene_biotype=protein_coding;locus_tag=PHA56_RS11450;old_locus_tag=PHA56_11455 NZ_CP116214.1 Protein Homology CDS 2397968 2398012 . + 0 ID=cds-WP_001386830.1;Parent=gene-PHA56_RS11450;Dbxref=Genbank:WP_001386830.1;Name=WP_001386830.1;gbkey=CDS;gene=pheM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310449.1;locus_tag=PHA56_RS11450;product=pheST operon leader peptide PheM;protein_id=WP_001386830.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2398242 2399225 . + . ID=gene-PHA56_RS11455;Name=pheS;gbkey=Gene;gene=pheS;gene_biotype=protein_coding;locus_tag=PHA56_RS11455;old_locus_tag=PHA56_11460 NZ_CP116214.1 Protein Homology CDS 2398242 2399225 . + 0 ID=cds-WP_189087280.1;Parent=gene-PHA56_RS11455;Dbxref=Genbank:WP_189087280.1;Name=WP_189087280.1;Ontology_term=GO:0006432,GO:0004826,GO:0009328;gbkey=CDS;gene=pheS;go_component=phenylalanine-tRNA ligase complex|0009328||IEA;go_function=phenylalanine-tRNA ligase activity|0004826||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004851795.1;locus_tag=PHA56_RS11455;product=phenylalanine--tRNA ligase subunit alpha;protein_id=WP_189087280.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2399241 2401628 . + . ID=gene-PHA56_RS11460;Name=pheT;gbkey=Gene;gene=pheT;gene_biotype=protein_coding;locus_tag=PHA56_RS11460;old_locus_tag=PHA56_11465 NZ_CP116214.1 Protein Homology CDS 2399241 2401628 . + 0 ID=cds-WP_014229730.1;Parent=gene-PHA56_RS11460;Dbxref=Genbank:WP_014229730.1;Name=WP_014229730.1;Ontology_term=GO:0006432,GO:0004826,GO:0009328;gbkey=CDS;gene=pheT;go_component=phenylalanine-tRNA ligase complex|0009328||IEA;go_function=phenylalanine-tRNA ligase activity|0004826||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227468.1;locus_tag=PHA56_RS11460;product=phenylalanine--tRNA ligase subunit beta;protein_id=WP_014229730.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2401633 2401932 . + . ID=gene-PHA56_RS11465;Name=ihfA;gbkey=Gene;gene=ihfA;gene_biotype=protein_coding;locus_tag=PHA56_RS11465;old_locus_tag=PHA56_11470 NZ_CP116214.1 Protein Homology CDS 2401633 2401932 . + 0 ID=cds-WP_004851790.1;Parent=gene-PHA56_RS11465;Dbxref=Genbank:WP_004851790.1;Name=WP_004851790.1;Ontology_term=GO:0006310,GO:0006355,GO:0006417,GO:0075713,GO:0003677;gbkey=CDS;gene=ihfA;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,regulation of DNA-templated transcription|0006355||IEA,regulation of translation|0006417||IEA,establishment of integrated proviral latency|0075713||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460305.1;locus_tag=PHA56_RS11465;product=integration host factor subunit alpha;protein_id=WP_004851790.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2402032 2403018 . + . ID=gene-PHA56_RS11470;Name=btuC;gbkey=Gene;gene=btuC;gene_biotype=protein_coding;locus_tag=PHA56_RS11470;old_locus_tag=PHA56_11475 NZ_CP116214.1 Protein Homology CDS 2402032 2403018 . + 0 ID=cds-WP_009653750.1;Parent=gene-PHA56_RS11470;Dbxref=Genbank:WP_009653750.1;Name=WP_009653750.1;Ontology_term=GO:0005524,GO:0022857;gbkey=CDS;gene=btuC;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004134071.1;locus_tag=PHA56_RS11470;product=vitamin B12 ABC transporter permease BtuC;protein_id=WP_009653750.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2403045 2403845 . - . ID=gene-PHA56_RS11475;Name=PHA56_RS11475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS11475;old_locus_tag=PHA56_11480 NZ_CP116214.1 Protein Homology CDS 2403045 2403845 . - 0 ID=cds-WP_004851786.1;Parent=gene-PHA56_RS11475;Dbxref=Genbank:WP_004851786.1;Name=WP_004851786.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004102954.1;locus_tag=PHA56_RS11475;product=MetQ/NlpA family lipoprotein;protein_id=WP_004851786.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2404070 2404621 . + . ID=gene-PHA56_RS11480;Name=PHA56_RS11480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS11480;old_locus_tag=PHA56_11485 NZ_CP116214.1 Protein Homology CDS 2404070 2404621 . + 0 ID=cds-WP_119834487.1;Parent=gene-PHA56_RS11480;Dbxref=Genbank:WP_119834487.1;Name=WP_119834487.1;Ontology_term=GO:0006979,GO:0004602;gbkey=CDS;go_function=glutathione peroxidase activity|0004602||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227460.1;locus_tag=PHA56_RS11480;product=glutathione peroxidase;protein_id=WP_119834487.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2404621 2405370 . + . ID=gene-PHA56_RS11485;Name=btuD;gbkey=Gene;gene=btuD;gene_biotype=protein_coding;locus_tag=PHA56_RS11485;old_locus_tag=PHA56_11490 NZ_CP116214.1 Protein Homology CDS 2404621 2405370 . + 0 ID=cds-WP_038424643.1;Parent=gene-PHA56_RS11485;Dbxref=Genbank:WP_038424643.1;Name=WP_038424643.1;Ontology_term=GO:0015889,GO:0005524;gbkey=CDS;gene=btuD;go_function=ATP binding|0005524||IEA;go_process=cobalamin transport|0015889||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227459.1;locus_tag=PHA56_RS11485;product=vitamin B12 ABC transporter ATP-binding protein BtuD;protein_id=WP_038424643.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2405452 2405916 . + . ID=gene-PHA56_RS11490;Name=PHA56_RS11490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS11490;old_locus_tag=PHA56_11495 NZ_CP116214.1 Protein Homology CDS 2405452 2405916 . + 0 ID=cds-WP_038424642.1;Parent=gene-PHA56_RS11490;Dbxref=Genbank:WP_038424642.1;Name=WP_038424642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227458.1;locus_tag=PHA56_RS11490;product=NlpC/P60 family protein;protein_id=WP_038424642.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2406078 2407520 . + . ID=gene-PHA56_RS11495;Name=selO;gbkey=Gene;gene=selO;gene_biotype=protein_coding;locus_tag=PHA56_RS11495;old_locus_tag=PHA56_11500 NZ_CP116214.1 Protein Homology CDS 2406078 2407520 . + 0 ID=cds-WP_038424641.1;Parent=gene-PHA56_RS11495;Dbxref=Genbank:WP_038424641.1;Name=WP_038424641.1;Ontology_term=GO:0018117,GO:0005524,GO:0070733;gbkey=CDS;gene=selO;go_function=ATP binding|0005524||IEA,protein adenylyltransferase activity|0070733||IEA;go_process=protein adenylylation|0018117||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227457.1;locus_tag=PHA56_RS11495;product=protein adenylyltransferase SelO;protein_id=WP_038424641.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2407555 2407734 . - . ID=gene-PHA56_RS11500;Name=hemP;gbkey=Gene;gene=hemP;gene_biotype=protein_coding;locus_tag=PHA56_RS11500;old_locus_tag=PHA56_11505 NZ_CP116214.1 Protein Homology CDS 2407555 2407734 . - 0 ID=cds-WP_160741222.1;Parent=gene-PHA56_RS11500;Dbxref=Genbank:WP_160741222.1;Name=WP_160741222.1;gbkey=CDS;gene=hemP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227456.1;locus_tag=PHA56_RS11500;product=hemin uptake protein HemP;protein_id=WP_160741222.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2407900 2408946 . - . ID=gene-PHA56_RS11505;Name=aroH;gbkey=Gene;gene=aroH;gene_biotype=protein_coding;locus_tag=PHA56_RS11505;old_locus_tag=PHA56_11510 NZ_CP116214.1 Protein Homology CDS 2407900 2408946 . - 0 ID=cds-WP_025108222.1;Parent=gene-PHA56_RS11505;Dbxref=Genbank:WP_025108222.1;Name=WP_025108222.1;gbkey=CDS;gene=aroH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004175613.1;locus_tag=PHA56_RS11505;product=3-deoxy-7-phosphoheptulonate synthase AroH;protein_id=WP_025108222.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2409100 2409933 . - . ID=gene-PHA56_RS11510;Name=PHA56_RS11510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS11510;old_locus_tag=PHA56_11515 NZ_CP116214.1 Protein Homology CDS 2409100 2409933 . - 0 ID=cds-WP_004851771.1;Parent=gene-PHA56_RS11510;Dbxref=Genbank:WP_004851771.1;Name=WP_004851771.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227454.1;locus_tag=PHA56_RS11510;product=kinase/pyrophosphorylase;protein_id=WP_004851771.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2410276 2412654 . + . ID=gene-PHA56_RS11515;Name=ppsA;gbkey=Gene;gene=ppsA;gene_biotype=protein_coding;locus_tag=PHA56_RS11515;old_locus_tag=PHA56_11520 NZ_CP116214.1 Protein Homology CDS 2410276 2412654 . + 0 ID=cds-WP_014229722.1;Parent=gene-PHA56_RS11515;Dbxref=Genbank:WP_014229722.1;Name=WP_014229722.1;Ontology_term=GO:0006090,GO:0016310,GO:0005524,GO:0008986,GO:0016772;gbkey=CDS;gene=ppsA;go_function=ATP binding|0005524||IEA,pyruvate%2C water dikinase activity|0008986||IEA,transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;go_process=pyruvate metabolic process|0006090||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227452.1;locus_tag=PHA56_RS11515;product=phosphoenolpyruvate synthase;protein_id=WP_014229722.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2412738 2412845 . - . ID=gene-PHA56_RS11520;Name=rprA;gbkey=Gene;gene=rprA;gene_biotype=antisense_RNA;locus_tag=PHA56_RS11520;old_locus_tag=PHA56_11525 NZ_CP116214.1 cmsearch antisense_RNA 2412738 2412845 . - . ID=rna-PHA56_RS11520;Parent=gene-PHA56_RS11520;Dbxref=RFAM:RF00034;gbkey=ncRNA;gene=rprA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA56_RS11520;product=antisense sRNA RprA NZ_CP116214.1 cmsearch exon 2412738 2412845 . - . ID=exon-PHA56_RS11520-1;Parent=rna-PHA56_RS11520;Dbxref=RFAM:RF00034;gbkey=ncRNA;gene=rprA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA56_RS11520;product=antisense sRNA RprA NZ_CP116214.1 RefSeq gene 2413058 2414179 . - . ID=gene-PHA56_RS11525;Name=ydiK;gbkey=Gene;gene=ydiK;gene_biotype=protein_coding;locus_tag=PHA56_RS11525;old_locus_tag=PHA56_11530 NZ_CP116214.1 Protein Homology CDS 2413058 2414179 . - 0 ID=cds-WP_032694066.1;Parent=gene-PHA56_RS11525;Dbxref=Genbank:WP_032694066.1;Name=WP_032694066.1;gbkey=CDS;gene=ydiK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004113594.1;locus_tag=PHA56_RS11525;product=AI-2E family transporter YdiK;protein_id=WP_032694066.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2414383 2417439 . + . ID=gene-PHA56_RS11530;Name=PHA56_RS11530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS11530;old_locus_tag=PHA56_11535 NZ_CP116214.1 Protein Homology CDS 2414383 2417439 . + 0 ID=cds-WP_014229720.1;Parent=gene-PHA56_RS11530;Dbxref=Genbank:WP_014229720.1;Name=WP_014229720.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004189481.1;locus_tag=PHA56_RS11530;product=FAD-binding and (Fe-S)-binding domain-containing protein;protein_id=WP_014229720.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2417436 2417846 . + . ID=gene-PHA56_RS11535;Name=menI;gbkey=Gene;gene=menI;gene_biotype=protein_coding;locus_tag=PHA56_RS11535;old_locus_tag=PHA56_11540 NZ_CP116214.1 Protein Homology CDS 2417436 2417846 . + 0 ID=cds-WP_038424640.1;Parent=gene-PHA56_RS11535;Dbxref=Genbank:WP_038424640.1;Name=WP_038424640.1;gbkey=CDS;gene=menI;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227448.1;locus_tag=PHA56_RS11535;product=1%2C4-dihydroxy-2-naphthoyl-CoA hydrolase;protein_id=WP_038424640.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2418136 2418384 . + . ID=gene-PHA56_RS11540;Name=PHA56_RS11540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS11540;old_locus_tag=PHA56_11545 NZ_CP116214.1 Protein Homology CDS 2418136 2418384 . + 0 ID=cds-WP_004102935.1;Parent=gene-PHA56_RS11540;Dbxref=Genbank:WP_004102935.1;Name=WP_004102935.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227447.1;locus_tag=PHA56_RS11540;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=WP_004102935.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2418919 2419548 . - . ID=gene-PHA56_RS11545;Name=PHA56_RS11545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS11545;old_locus_tag=PHA56_11550 NZ_CP116214.1 Protein Homology CDS 2418919 2419548 . - 0 ID=cds-WP_032720589.1;Parent=gene-PHA56_RS11545;Dbxref=Genbank:WP_032720589.1;Name=WP_032720589.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004851761.1;locus_tag=PHA56_RS11545;product=helix-turn-helix domain-containing protein;protein_id=WP_032720589.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2419627 2420286 . - . ID=gene-PHA56_RS11550;Name=PHA56_RS11550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS11550;old_locus_tag=PHA56_11555 NZ_CP116214.1 Protein Homology CDS 2419627 2420286 . - 0 ID=cds-WP_014229717.1;Parent=gene-PHA56_RS11550;Dbxref=Genbank:WP_014229717.1;Name=WP_014229717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004119148.1;locus_tag=PHA56_RS11550;product=winged helix-turn-helix transcriptional regulator;protein_id=WP_014229717.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2420720 2421250 . + . ID=gene-PHA56_RS11555;Name=PHA56_RS11555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS11555;old_locus_tag=PHA56_11560 NZ_CP116214.1 Protein Homology CDS 2420720 2421250 . + 0 ID=cds-WP_038424639.1;Parent=gene-PHA56_RS11555;Dbxref=Genbank:WP_038424639.1;Name=WP_038424639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004851756.1;locus_tag=PHA56_RS11555;product=fimbrial protein;protein_id=WP_038424639.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2421308 2421985 . + . ID=gene-PHA56_RS11560;Name=PHA56_RS11560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS11560;old_locus_tag=PHA56_11565 NZ_CP116214.1 Protein Homology CDS 2421308 2421985 . + 0 ID=cds-WP_038424638.1;Parent=gene-PHA56_RS11560;Dbxref=Genbank:WP_038424638.1;Name=WP_038424638.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017693575.1;locus_tag=PHA56_RS11560;product=molecular chaperone;protein_id=WP_038424638.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2422029 2424566 . + . ID=gene-PHA56_RS11565;Name=PHA56_RS11565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS11565;old_locus_tag=PHA56_11570 NZ_CP116214.1 Protein Homology CDS 2422029 2424566 . + 0 ID=cds-WP_271292971.1;Parent=gene-PHA56_RS11565;Dbxref=Genbank:WP_271292971.1;Name=WP_271292971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017693574.1;locus_tag=PHA56_RS11565;product=fimbrial biogenesis outer membrane usher protein;protein_id=WP_271292971.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2424569 2425516 . + . ID=gene-PHA56_RS11570;Name=PHA56_RS11570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS11570;old_locus_tag=PHA56_11575 NZ_CP116214.1 Protein Homology CDS 2424569 2425516 . + 0 ID=cds-WP_014229713.1;Parent=gene-PHA56_RS11570;Dbxref=Genbank:WP_014229713.1;Name=WP_014229713.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009653729.1;locus_tag=PHA56_RS11570;product=fimbrial protein;protein_id=WP_014229713.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2425528 2426040 . + . ID=gene-PHA56_RS11575;Name=PHA56_RS11575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS11575;old_locus_tag=PHA56_11580 NZ_CP116214.1 Protein Homology CDS 2425528 2426040 . + 0 ID=cds-WP_032720591.1;Parent=gene-PHA56_RS11575;Dbxref=Genbank:WP_032720591.1;Name=WP_032720591.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009653715.1;locus_tag=PHA56_RS11575;product=fimbrial protein;protein_id=WP_032720591.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2426485 2426862 . + . ID=gene-PHA56_RS11580;Name=sufA;gbkey=Gene;gene=sufA;gene_biotype=protein_coding;locus_tag=PHA56_RS11580;old_locus_tag=PHA56_11585 NZ_CP116214.1 Protein Homology CDS 2426485 2426862 . + 0 ID=cds-WP_004119171.1;Parent=gene-PHA56_RS11580;Dbxref=Genbank:WP_004119171.1;Name=WP_004119171.1;gbkey=CDS;gene=sufA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227426.1;locus_tag=PHA56_RS11580;product=Fe-S cluster assembly scaffold SufA;protein_id=WP_004119171.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2426865 2428352 . + . ID=gene-PHA56_RS11585;Name=sufB;gbkey=Gene;gene=sufB;gene_biotype=protein_coding;locus_tag=PHA56_RS11585;old_locus_tag=PHA56_11590 NZ_CP116214.1 Protein Homology CDS 2426865 2428352 . + 0 ID=cds-WP_014229711.1;Parent=gene-PHA56_RS11585;Dbxref=Genbank:WP_014229711.1;Name=WP_014229711.1;Ontology_term=GO:0016226;gbkey=CDS;gene=sufB;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227425.1;locus_tag=PHA56_RS11585;product=Fe-S cluster assembly protein SufB;protein_id=WP_014229711.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2428369 2429115 . + . ID=gene-PHA56_RS11590;Name=sufC;gbkey=Gene;gene=sufC;gene_biotype=protein_coding;locus_tag=PHA56_RS11590;old_locus_tag=PHA56_11595 NZ_CP116214.1 Protein Homology CDS 2428369 2429115 . + 0 ID=cds-WP_004851743.1;Parent=gene-PHA56_RS11590;Dbxref=Genbank:WP_004851743.1;Name=WP_004851743.1;Ontology_term=GO:0005524;gbkey=CDS;gene=sufC;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008500629.1;locus_tag=PHA56_RS11590;product=Fe-S cluster assembly ATPase SufC;protein_id=WP_004851743.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2429090 2430364 . + . ID=gene-PHA56_RS11595;Name=sufD;gbkey=Gene;gene=sufD;gene_biotype=protein_coding;locus_tag=PHA56_RS11595;old_locus_tag=PHA56_11600 NZ_CP116214.1 Protein Homology CDS 2429090 2430364 . + 0 ID=cds-WP_014229710.1;Parent=gene-PHA56_RS11595;Dbxref=Genbank:WP_014229710.1;Name=WP_014229710.1;Ontology_term=GO:0016226;gbkey=CDS;gene=sufD;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229710.1;locus_tag=PHA56_RS11595;product=Fe-S cluster assembly protein SufD;protein_id=WP_014229710.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2430361 2431581 . + . ID=gene-PHA56_RS11600;Name=sufS;gbkey=Gene;gene=sufS;gene_biotype=protein_coding;locus_tag=PHA56_RS11600;old_locus_tag=PHA56_11605 NZ_CP116214.1 Protein Homology CDS 2430361 2431581 . + 0 ID=cds-WP_014229709.1;Parent=gene-PHA56_RS11600;Dbxref=Genbank:WP_014229709.1;Name=WP_014229709.1;Ontology_term=GO:0006534,GO:0030170,GO:0031071;gbkey=CDS;gene=sufS;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine desulfurase activity|0031071||IEA;go_process=cysteine metabolic process|0006534||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004851739.1;locus_tag=PHA56_RS11600;product=cysteine desulfurase SufS;protein_id=WP_014229709.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2431593 2432009 . + . ID=gene-PHA56_RS11605;Name=sufE;gbkey=Gene;gene=sufE;gene_biotype=protein_coding;locus_tag=PHA56_RS11605;old_locus_tag=PHA56_11610 NZ_CP116214.1 Protein Homology CDS 2431593 2432009 . + 0 ID=cds-WP_004851737.1;Parent=gene-PHA56_RS11605;Dbxref=Genbank:WP_004851737.1;Name=WP_004851737.1;gbkey=CDS;gene=sufE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227421.1;locus_tag=PHA56_RS11605;product=cysteine desulfuration protein SufE;protein_id=WP_004851737.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2432111 2433097 . + . ID=gene-PHA56_RS11610;Name=PHA56_RS11610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS11610;old_locus_tag=PHA56_11615 NZ_CP116214.1 Protein Homology CDS 2432111 2433097 . + 0 ID=cds-WP_004851735.1;Parent=gene-PHA56_RS11610;Dbxref=Genbank:WP_004851735.1;Name=WP_004851735.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004119182.1;locus_tag=PHA56_RS11610;product=L%2CD-transpeptidase family protein;protein_id=WP_004851735.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2433162 2433398 . - . ID=gene-PHA56_RS11615;Name=lpp;gbkey=Gene;gene=lpp;gene_biotype=protein_coding;locus_tag=PHA56_RS11615;old_locus_tag=PHA56_11620 NZ_CP116214.1 Protein Homology CDS 2433162 2433398 . - 0 ID=cds-WP_003029373.1;Parent=gene-PHA56_RS11615;Dbxref=Genbank:WP_003029373.1;Name=WP_003029373.1;gbkey=CDS;gene=lpp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460342.1;locus_tag=PHA56_RS11615;product=murein lipoprotein Lpp;protein_id=WP_003029373.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2433711 2435123 . - . ID=gene-PHA56_RS11620;Name=pykF;gbkey=Gene;gene=pykF;gene_biotype=protein_coding;locus_tag=PHA56_RS11620;old_locus_tag=PHA56_11625 NZ_CP116214.1 Protein Homology CDS 2433711 2435123 . - 0 ID=cds-WP_004119183.1;Parent=gene-PHA56_RS11620;Dbxref=Genbank:WP_004119183.1;Name=WP_004119183.1;Ontology_term=GO:0006096,GO:0004743;gbkey=CDS;gene=pykF;go_function=pyruvate kinase activity|0004743||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010346010.1;locus_tag=PHA56_RS11620;product=pyruvate kinase PykF;protein_id=WP_004119183.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2435633 2435845 . + . ID=gene-PHA56_RS11625;Name=fumD;gbkey=Gene;gene=fumD;gene_biotype=protein_coding;locus_tag=PHA56_RS11625;old_locus_tag=PHA56_11630 NZ_CP116214.1 Protein Homology CDS 2435633 2435845 . + 0 ID=cds-WP_004851729.1;Parent=gene-PHA56_RS11625;Dbxref=Genbank:WP_004851729.1;Name=WP_004851729.1;gbkey=CDS;gene=fumD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227415.1;locus_tag=PHA56_RS11625;product=fumarate hydratase FumD;protein_id=WP_004851729.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2435872 2436510 . - . ID=gene-PHA56_RS11630;Name=PHA56_RS11630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS11630;old_locus_tag=PHA56_11635 NZ_CP116214.1 Protein Homology CDS 2435872 2436510 . - 0 ID=cds-WP_014229708.1;Parent=gene-PHA56_RS11630;Dbxref=Genbank:WP_014229708.1;Name=WP_014229708.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227414.1;locus_tag=PHA56_RS11630;product=TetR/AcrR family transcriptional regulator;protein_id=WP_014229708.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2436637 2438490 . + . ID=gene-PHA56_RS11635;Name=PHA56_RS11635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS11635;old_locus_tag=PHA56_11640 NZ_CP116214.1 Protein Homology CDS 2436637 2438490 . + 0 ID=cds-WP_038424636.1;Parent=gene-PHA56_RS11635;Dbxref=Genbank:WP_038424636.1;Name=WP_038424636.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229707.1;locus_tag=PHA56_RS11635;product=sugar phosphate isomerase/epimerase and 4-hydroxyphenylpyruvate domain-containing protein;protein_id=WP_038424636.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2438570 2439889 . + . ID=gene-PHA56_RS11640;Name=PHA56_RS11640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS11640;old_locus_tag=PHA56_11645 NZ_CP116214.1 Protein Homology CDS 2438570 2439889 . + 0 ID=cds-WP_014229706.1;Parent=gene-PHA56_RS11640;Dbxref=Genbank:WP_014229706.1;Name=WP_014229706.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227412.1;locus_tag=PHA56_RS11640;product=MFS transporter;protein_id=WP_014229706.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2439921 2440757 . + . ID=gene-PHA56_RS11645;Name=PHA56_RS11645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS11645;old_locus_tag=PHA56_11650 NZ_CP116214.1 Protein Homology CDS 2439921 2440757 . + 0 ID=cds-WP_077255274.1;Parent=gene-PHA56_RS11645;Dbxref=Genbank:WP_077255274.1;Name=WP_077255274.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227411.1;locus_tag=PHA56_RS11645;product=shikimate dehydrogenase;protein_id=WP_077255274.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2440817 2441557 . + . ID=gene-PHA56_RS11650;Name=PHA56_RS11650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS11650;old_locus_tag=PHA56_11655 NZ_CP116214.1 Protein Homology CDS 2440817 2441557 . + 0 ID=cds-WP_032694058.1;Parent=gene-PHA56_RS11650;Dbxref=Genbank:WP_032694058.1;Name=WP_032694058.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004113580.1;locus_tag=PHA56_RS11650;product=substrate-binding domain-containing protein;protein_id=WP_032694058.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2441541 2442290 . - . ID=gene-PHA56_RS11655;Name=PHA56_RS11655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS11655;old_locus_tag=PHA56_11660 NZ_CP116214.1 Protein Homology CDS 2441541 2442290 . - 0 ID=cds-WP_032694057.1;Parent=gene-PHA56_RS11655;Dbxref=Genbank:WP_032694057.1;Name=WP_032694057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227409.1;locus_tag=PHA56_RS11655;product=ABC transporter ATP-binding protein;protein_id=WP_032694057.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2442290 2443294 . - . ID=gene-PHA56_RS11660;Name=PHA56_RS11660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS11660;old_locus_tag=PHA56_11665 NZ_CP116214.1 Protein Homology CDS 2442290 2443294 . - 0 ID=cds-WP_014229702.1;Parent=gene-PHA56_RS11660;Dbxref=Genbank:WP_014229702.1;Name=WP_014229702.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004102892.1;locus_tag=PHA56_RS11660;product=iron ABC transporter permease;protein_id=WP_014229702.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2443287 2444345 . - . ID=gene-PHA56_RS11665;Name=PHA56_RS11665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS11665;old_locus_tag=PHA56_11670 NZ_CP116214.1 Protein Homology CDS 2443287 2444345 . - 0 ID=cds-WP_032694056.1;Parent=gene-PHA56_RS11665;Dbxref=Genbank:WP_032694056.1;Name=WP_032694056.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004851715.1;locus_tag=PHA56_RS11665;product=ABC transporter substrate-binding protein;protein_id=WP_032694056.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2444443 2445249 . - . ID=gene-PHA56_RS11670;Name=PHA56_RS11670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS11670;old_locus_tag=PHA56_11675 NZ_CP116214.1 Protein Homology CDS 2444443 2445249 . - 0 ID=cds-WP_004851713.1;Parent=gene-PHA56_RS11670;Dbxref=Genbank:WP_004851713.1;Name=WP_004851713.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016807781.1;locus_tag=PHA56_RS11670;product=DNA-binding transcriptional regulator;protein_id=WP_004851713.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2445440 2447104 . + . ID=gene-PHA56_RS11675;Name=PHA56_RS11675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS11675;old_locus_tag=PHA56_11680 NZ_CP116214.1 Protein Homology CDS 2445440 2447104 . + 0 ID=cds-WP_038424635.1;Parent=gene-PHA56_RS11675;Dbxref=Genbank:WP_038424635.1;Name=WP_038424635.1;Ontology_term=GO:0019622,GO:0008688;gbkey=CDS;go_function=3-(3-hydroxyphenyl)propionate hydroxylase activity|0008688||IEA;go_process=3-(3-hydroxy)phenylpropionate catabolic process|0019622||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308429.1;locus_tag=PHA56_RS11675;product=bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase;protein_id=WP_038424635.1;transl_table=11 NZ_CP116214.1 RefSeq pseudogene 2447106 2448050 . + . ID=gene-PHA56_RS11680;Name=mhpB;gbkey=Gene;gene=mhpB;gene_biotype=pseudogene;locus_tag=PHA56_RS11680;old_locus_tag=PHA56_11685;pseudo=true NZ_CP116214.1 Protein Homology CDS 2447106 2448050 . + 0 ID=cds-PHA56_RS11680;Parent=gene-PHA56_RS11680;Note=internal stop;Ontology_term=GO:0019439,GO:0047070;gbkey=CDS;gene=mhpB;go_function=3-carboxyethylcatechol 2%2C3-dioxygenase activity|0047070||IEA;go_process=aromatic compound catabolic process|0019439||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308430.1;locus_tag=PHA56_RS11680;product=3-carboxyethylcatechol 2%2C3-dioxygenase;pseudo=true;transl_table=11 NZ_CP116214.1 RefSeq gene 2448068 2448934 . + . ID=gene-PHA56_RS11685;Name=PHA56_RS11685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS11685;old_locus_tag=PHA56_11690 NZ_CP116214.1 Protein Homology CDS 2448068 2448934 . + 0 ID=cds-WP_014229698.1;Parent=gene-PHA56_RS11685;Dbxref=Genbank:WP_014229698.1;Name=WP_014229698.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229698.1;locus_tag=PHA56_RS11685;product=alpha/beta fold hydrolase;protein_id=WP_014229698.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2448944 2449750 . + . ID=gene-PHA56_RS11690;Name=mhpD;gbkey=Gene;gene=mhpD;gene_biotype=protein_coding;locus_tag=PHA56_RS11690;old_locus_tag=PHA56_11695 NZ_CP116214.1 Protein Homology CDS 2448944 2449750 . + 0 ID=cds-WP_032694054.1;Parent=gene-PHA56_RS11690;Dbxref=Genbank:WP_032694054.1;Name=WP_032694054.1;Ontology_term=GO:0019439,GO:0008684,GO:0030145;gbkey=CDS;gene=mhpD;go_function=2-oxopent-4-enoate hydratase activity|0008684||IEA,manganese ion binding|0030145||IEA;go_process=aromatic compound catabolic process|0019439||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229697.1;locus_tag=PHA56_RS11690;product=2-keto-4-pentenoate hydratase;protein_id=WP_032694054.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2449743 2450693 . + . ID=gene-PHA56_RS11695;Name=PHA56_RS11695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS11695;old_locus_tag=PHA56_11700 NZ_CP116214.1 Protein Homology CDS 2449743 2450693 . + 0 ID=cds-WP_025108198.1;Parent=gene-PHA56_RS11695;Dbxref=Genbank:WP_025108198.1;Name=WP_025108198.1;Ontology_term=GO:0008774;gbkey=CDS;go_function=acetaldehyde dehydrogenase (acetylating) activity|0008774||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227400.1;locus_tag=PHA56_RS11695;product=acetaldehyde dehydrogenase (acetylating);protein_id=WP_025108198.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2450690 2451706 . + . ID=gene-PHA56_RS11700;Name=dmpG;gbkey=Gene;gene=dmpG;gene_biotype=protein_coding;locus_tag=PHA56_RS11700;old_locus_tag=PHA56_11705 NZ_CP116214.1 Protein Homology CDS 2450690 2451706 . + 0 ID=cds-WP_014229695.1;Parent=gene-PHA56_RS11700;Dbxref=Genbank:WP_014229695.1;Name=WP_014229695.1;Ontology_term=GO:0008701;gbkey=CDS;gene=dmpG;go_function=4-hydroxy-2-oxovalerate aldolase activity|0008701||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019705824.1;locus_tag=PHA56_RS11700;product=4-hydroxy-2-oxovalerate aldolase;protein_id=WP_014229695.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2451781 2452977 . + . ID=gene-PHA56_RS11705;Name=mhpT;gbkey=Gene;gene=mhpT;gene_biotype=protein_coding;locus_tag=PHA56_RS11705;old_locus_tag=PHA56_11710 NZ_CP116214.1 Protein Homology CDS 2451781 2452977 . + 0 ID=cds-WP_014229694.1;Parent=gene-PHA56_RS11705;Dbxref=Genbank:WP_014229694.1;Name=WP_014229694.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mhpT;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017145708.1;locus_tag=PHA56_RS11705;product=3-(3-hydroxy-phenyl)propionate transporter MhpT;protein_id=WP_014229694.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2453119 2453856 . + . ID=gene-PHA56_RS11710;Name=PHA56_RS11710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS11710;old_locus_tag=PHA56_11715 NZ_CP116214.1 Protein Homology CDS 2453119 2453856 . + 0 ID=cds-WP_014229693.1;Parent=gene-PHA56_RS11710;Dbxref=Genbank:WP_014229693.1;Name=WP_014229693.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004113561.1;locus_tag=PHA56_RS11710;product=polyphenol oxidase family protein;protein_id=WP_014229693.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2453937 2455340 . + . ID=gene-PHA56_RS11715;Name=PHA56_RS11715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS11715;old_locus_tag=PHA56_11720 NZ_CP116214.1 Protein Homology CDS 2453937 2455340 . + 0 ID=cds-WP_014229692.1;Parent=gene-PHA56_RS11715;Dbxref=Genbank:WP_014229692.1;Name=WP_014229692.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000773789.1;locus_tag=PHA56_RS11715;product=DUF1996 domain-containing protein;protein_id=WP_014229692.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2456237 2457817 . - . ID=gene-PHA56_RS11720;Name=PHA56_RS11720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS11720;old_locus_tag=PHA56_11725 NZ_CP116214.1 Protein Homology CDS 2456237 2457817 . - 0 ID=cds-WP_014838732.1;Parent=gene-PHA56_RS11720;Dbxref=Genbank:WP_014838732.1;Name=WP_014838732.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227396.1;locus_tag=PHA56_RS11720;product=rhodanese homology domain-containing protein;protein_id=WP_014838732.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2457819 2458415 . - . ID=gene-PHA56_RS11725;Name=PHA56_RS11725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS11725;old_locus_tag=PHA56_11730 NZ_CP116214.1 Protein Homology CDS 2457819 2458415 . - 0 ID=cds-WP_032694744.1;Parent=gene-PHA56_RS11725;Dbxref=Genbank:WP_032694744.1;Name=WP_032694744.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004851689.1;locus_tag=PHA56_RS11725;product=cysteine dioxygenase;protein_id=WP_032694744.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2458523 2459416 . + . ID=gene-PHA56_RS11730;Name=PHA56_RS11730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS11730;old_locus_tag=PHA56_11735 NZ_CP116214.1 Protein Homology CDS 2458523 2459416 . + 0 ID=cds-WP_032694743.1;Parent=gene-PHA56_RS11730;Dbxref=Genbank:WP_032694743.1;Name=WP_032694743.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009653764.1;locus_tag=PHA56_RS11730;product=LysR family transcriptional regulator;protein_id=WP_032694743.1;transl_table=11 NZ_CP116214.1 RefSeq pseudogene 2459562 2460666 . + . ID=gene-PHA56_RS11735;Name=PHA56_RS11735;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS11735;old_locus_tag=PHA56_11740;pseudo=true NZ_CP116214.1 Protein Homology CDS 2459562 2460666 . + 0 ID=cds-PHA56_RS11735;Parent=gene-PHA56_RS11735;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227393.1;locus_tag=PHA56_RS11735;product=LLM class flavin-dependent oxidoreductase;pseudo=true;transl_table=11 NZ_CP116214.1 RefSeq gene 2460701 2461789 . + . ID=gene-PHA56_RS11740;Name=PHA56_RS11740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS11740;old_locus_tag=PHA56_11745 NZ_CP116214.1 Protein Homology CDS 2460701 2461789 . + 0 ID=cds-WP_050595152.1;Parent=gene-PHA56_RS11740;Dbxref=Genbank:WP_050595152.1;Name=WP_050595152.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015705146.1;locus_tag=PHA56_RS11740;product=acyl-CoA dehydrogenase family protein;protein_id=WP_050595152.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2461801 2462775 . + . ID=gene-PHA56_RS11745;Name=PHA56_RS11745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS11745;old_locus_tag=PHA56_11750 NZ_CP116214.1 Protein Homology CDS 2461801 2462775 . + 0 ID=cds-WP_025108190.1;Parent=gene-PHA56_RS11745;Dbxref=Genbank:WP_025108190.1;Name=WP_025108190.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004102851.1;locus_tag=PHA56_RS11745;product=ABC transporter substrate-binding protein;protein_id=WP_025108190.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2462775 2463800 . + . ID=gene-PHA56_RS11750;Name=PHA56_RS11750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS11750;old_locus_tag=PHA56_11755 NZ_CP116214.1 Protein Homology CDS 2462775 2463800 . + 0 ID=cds-WP_014229685.1;Parent=gene-PHA56_RS11750;Dbxref=Genbank:WP_014229685.1;Name=WP_014229685.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227390.1;locus_tag=PHA56_RS11750;product=ABC transporter substrate-binding protein;protein_id=WP_014229685.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2463781 2464776 . + . ID=gene-PHA56_RS11755;Name=PHA56_RS11755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS11755;old_locus_tag=PHA56_11760 NZ_CP116214.1 Protein Homology CDS 2463781 2464776 . + 0 ID=cds-WP_032720603.1;Parent=gene-PHA56_RS11755;Dbxref=Genbank:WP_032720603.1;Name=WP_032720603.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227389.1;locus_tag=PHA56_RS11755;product=ABC transporter permease subunit;protein_id=WP_032720603.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2464770 2465558 . + . ID=gene-PHA56_RS11760;Name=PHA56_RS11760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS11760;old_locus_tag=PHA56_11765 NZ_CP116214.1 Protein Homology CDS 2464770 2465558 . + 0 ID=cds-WP_014838728.1;Parent=gene-PHA56_RS11760;Dbxref=Genbank:WP_014838728.1;Name=WP_014838728.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009653735.1;locus_tag=PHA56_RS11760;product=ATP-binding cassette domain-containing protein;protein_id=WP_014838728.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2465697 2467850 . - . ID=gene-PHA56_RS11765;Name=PHA56_RS11765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS11765;old_locus_tag=PHA56_11770 NZ_CP116214.1 Protein Homology CDS 2465697 2467850 . - 0 ID=cds-WP_014229682.1;Parent=gene-PHA56_RS11765;Dbxref=Genbank:WP_014229682.1;Name=WP_014229682.1;Ontology_term=GO:0015891,GO:0015343,GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;go_function=siderophore-iron transmembrane transporter activity|0015343||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004851676.1;locus_tag=PHA56_RS11765;product=TonB-dependent siderophore receptor;protein_id=WP_014229682.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2468276 2469097 . + . ID=gene-PHA56_RS11770;Name=PHA56_RS11770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS11770;old_locus_tag=PHA56_11775 NZ_CP116214.1 Protein Homology CDS 2468276 2469097 . + 0 ID=cds-WP_014229681.1;Parent=gene-PHA56_RS11770;Dbxref=Genbank:WP_014229681.1;Name=WP_014229681.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229681.1;locus_tag=PHA56_RS11770;product=ABC transporter ATP-binding protein;protein_id=WP_014229681.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2469094 2470119 . + . ID=gene-PHA56_RS11775;Name=PHA56_RS11775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS11775;old_locus_tag=PHA56_11780 NZ_CP116214.1 Protein Homology CDS 2469094 2470119 . + 0 ID=cds-WP_014838725.1;Parent=gene-PHA56_RS11775;Dbxref=Genbank:WP_014838725.1;Name=WP_014838725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227385.1;locus_tag=PHA56_RS11775;product=iron ABC transporter permease;protein_id=WP_014838725.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2470116 2471168 . + . ID=gene-PHA56_RS11780;Name=PHA56_RS11780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS11780;old_locus_tag=PHA56_11785 NZ_CP116214.1 Protein Homology CDS 2470116 2471168 . + 0 ID=cds-WP_076752302.1;Parent=gene-PHA56_RS11780;Dbxref=Genbank:WP_076752302.1;Name=WP_076752302.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004143336.1;locus_tag=PHA56_RS11780;product=iron ABC transporter permease;protein_id=WP_076752302.1;transl_table=11 NZ_CP116214.1 RefSeq pseudogene 2471162 2472132 . + . ID=gene-PHA56_RS11785;Name=PHA56_RS11785;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS11785;old_locus_tag=PHA56_11790;partial=true;pseudo=true;start_range=.,2471162 NZ_CP116214.1 Protein Homology CDS 2471162 2472132 . + 0 ID=cds-PHA56_RS11785;Parent=gene-PHA56_RS11785;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227383.1;locus_tag=PHA56_RS11785;partial=true;product=iron-siderophore ABC transporter substrate-binding protein;pseudo=true;start_range=.,2471162;transl_table=11 NZ_CP116214.1 RefSeq gene 2472129 2473028 . + . ID=gene-PHA56_RS11790;Name=PHA56_RS11790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS11790;old_locus_tag=PHA56_11795 NZ_CP116214.1 Protein Homology CDS 2472129 2473028 . + 0 ID=cds-WP_014838722.1;Parent=gene-PHA56_RS11790;Dbxref=Genbank:WP_014838722.1;Name=WP_014838722.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004863091.1;locus_tag=PHA56_RS11790;product=MurR/RpiR family transcriptional regulator;protein_id=WP_014838722.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2473124 2473891 . + . ID=gene-PHA56_RS11795;Name=PHA56_RS11795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS11795;old_locus_tag=PHA56_11800 NZ_CP116214.1 Protein Homology CDS 2473124 2473891 . + 0 ID=cds-WP_064392708.1;Parent=gene-PHA56_RS11795;Dbxref=Genbank:WP_064392708.1;Name=WP_064392708.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227380.1;locus_tag=PHA56_RS11795;product=basic amino acid ABC transporter substrate-binding protein;protein_id=WP_064392708.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2473957 2474724 . + . ID=gene-PHA56_RS11800;Name=PHA56_RS11800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS11800;old_locus_tag=PHA56_11805 NZ_CP116214.1 Protein Homology CDS 2473957 2474724 . + 0 ID=cds-WP_004102832.1;Parent=gene-PHA56_RS11800;Dbxref=Genbank:WP_004102832.1;Name=WP_004102832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004706279.1;locus_tag=PHA56_RS11800;product=amino acid ABC transporter permease;protein_id=WP_004102832.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2474708 2475430 . + . ID=gene-PHA56_RS11805;Name=PHA56_RS11805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS11805;old_locus_tag=PHA56_11810 NZ_CP116214.1 Protein Homology CDS 2474708 2475430 . + 0 ID=cds-WP_014229677.1;Parent=gene-PHA56_RS11805;Dbxref=Genbank:WP_014229677.1;Name=WP_014229677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227378.1;locus_tag=PHA56_RS11805;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_014229677.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2475531 2476736 . - . ID=gene-PHA56_RS11810;Name=PHA56_RS11810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS11810;old_locus_tag=PHA56_11815 NZ_CP116214.1 Protein Homology CDS 2475531 2476736 . - 0 ID=cds-WP_076752301.1;Parent=gene-PHA56_RS11810;Dbxref=Genbank:WP_076752301.1;Name=WP_076752301.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227373.1;locus_tag=PHA56_RS11810;product=MFS transporter;protein_id=WP_076752301.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2477019 2478170 . + . ID=gene-PHA56_RS11815;Name=PHA56_RS11815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS11815;old_locus_tag=PHA56_11820 NZ_CP116214.1 Protein Homology CDS 2477019 2478170 . + 0 ID=cds-WP_038424630.1;Parent=gene-PHA56_RS11815;Dbxref=Genbank:WP_038424630.1;Name=WP_038424630.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004139594.1;locus_tag=PHA56_RS11815;product=M20 family metallopeptidase;protein_id=WP_038424630.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2478562 2480712 . - . ID=gene-PHA56_RS11820;Name=fdhF;gbkey=Gene;gene=fdhF;gene_biotype=protein_coding;locus_tag=PHA56_RS11820;old_locus_tag=PHA56_11825 NZ_CP116214.1 Protein Homology CDS 2478562 2480712 . - 0 ID=cds-WP_038424629.1;Parent=gene-PHA56_RS11820;Dbxref=Genbank:WP_038424629.1;Name=WP_038424629.1;Ontology_term=GO:0015942,GO:0008863,GO:0009326;gbkey=CDS;gene=fdhF;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA;go_process=formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004180308.1;locus_tag=PHA56_RS11820;product=formate dehydrogenase subunit alpha;protein_id=WP_038424629.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2480949 2482031 . - . ID=gene-PHA56_RS11825;Name=PHA56_RS11825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS11825;old_locus_tag=PHA56_11830 NZ_CP116214.1 Protein Homology CDS 2480949 2482031 . - 0 ID=cds-WP_032720607.1;Parent=gene-PHA56_RS11825;Dbxref=Genbank:WP_032720607.1;Name=WP_032720607.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009652084.1;locus_tag=PHA56_RS11825;product=malate/lactate/ureidoglycolate dehydrogenase;protein_id=WP_032720607.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2482892 2483383 . + . ID=gene-PHA56_RS11830;Name=tssB;gbkey=Gene;gene=tssB;gene_biotype=protein_coding;locus_tag=PHA56_RS11830;old_locus_tag=PHA56_11835 NZ_CP116214.1 Protein Homology CDS 2482892 2483383 . + 0 ID=cds-WP_014229069.1;Parent=gene-PHA56_RS11830;Dbxref=Genbank:WP_014229069.1;Name=WP_014229069.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssB;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226597.1;locus_tag=PHA56_RS11830;product=type VI secretion system contractile sheath small subunit;protein_id=WP_014229069.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2483424 2484956 . + . ID=gene-PHA56_RS11835;Name=tssC;gbkey=Gene;gene=tssC;gene_biotype=protein_coding;locus_tag=PHA56_RS11835;old_locus_tag=PHA56_11840 NZ_CP116214.1 Protein Homology CDS 2483424 2484956 . + 0 ID=cds-WP_038423429.1;Parent=gene-PHA56_RS11835;Dbxref=Genbank:WP_038423429.1;Name=WP_038423429.1;Ontology_term=GO:0033103,GO:0003674,GO:0033104;gbkey=CDS;gene=tssC;go_component=type VI protein secretion system complex|0033104||IEA;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226598.1;locus_tag=PHA56_RS11835;product=type VI secretion system contractile sheath large subunit;protein_id=WP_038423429.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2484977 2486317 . + . ID=gene-PHA56_RS11840;Name=tssK;gbkey=Gene;gene=tssK;gene_biotype=protein_coding;locus_tag=PHA56_RS11840;old_locus_tag=PHA56_11845 NZ_CP116214.1 Protein Homology CDS 2484977 2486317 . + 0 ID=cds-WP_038424628.1;Parent=gene-PHA56_RS11840;Dbxref=Genbank:WP_038424628.1;Name=WP_038424628.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssK;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006810798.1;locus_tag=PHA56_RS11840;product=type VI secretion system baseplate subunit TssK;protein_id=WP_038424628.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2486314 2487003 . + . ID=gene-PHA56_RS11845;Name=tssL;gbkey=Gene;gene=tssL;gene_biotype=protein_coding;locus_tag=PHA56_RS11845;old_locus_tag=PHA56_11850 NZ_CP116214.1 Protein Homology CDS 2486314 2487003 . + 0 ID=cds-WP_038424627.1;Parent=gene-PHA56_RS11845;Dbxref=Genbank:WP_038424627.1;Name=WP_038424627.1;gbkey=CDS;gene=tssL;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226600.1;locus_tag=PHA56_RS11845;product=type VI secretion system protein TssL%2C short form;protein_id=WP_038424627.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2487000 2488712 . + . ID=gene-PHA56_RS11850;Name=PHA56_RS11850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS11850;old_locus_tag=PHA56_11855 NZ_CP116214.1 Protein Homology CDS 2487000 2488712 . + 0 ID=cds-WP_038424626.1;Parent=gene-PHA56_RS11850;Dbxref=Genbank:WP_038424626.1;Name=WP_038424626.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003855634.1;locus_tag=PHA56_RS11850;product=OmpA family protein;protein_id=WP_038424626.1;transl_table=11 NZ_CP116214.1 RefSeq pseudogene 2488717 2489207 . + . ID=gene-PHA56_RS11855;Name=PHA56_RS11855;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS11855;old_locus_tag=PHA56_11860;pseudo=true NZ_CP116214.1 Protein Homology CDS 2488717 2489207 . + 0 ID=cds-PHA56_RS11855;Parent=gene-PHA56_RS11855;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226602.1;locus_tag=PHA56_RS11855;product=Hcp family type VI secretion system effector;pseudo=true;transl_table=11 NZ_CP116214.1 RefSeq pseudogene 2489494 2489793 . + . ID=gene-PHA56_RS11860;Name=PHA56_RS11860;end_range=2489793,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS11860;old_locus_tag=PHA56_11865;partial=true;pseudo=true NZ_CP116214.1 Protein Homology CDS 2489494 2489793 . + 0 ID=cds-PHA56_RS11860;Parent=gene-PHA56_RS11860;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2489793,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016154475.1;locus_tag=PHA56_RS11860;partial=true;product=Clp protease;pseudo=true;transl_table=11 NZ_CP116214.1 RefSeq gene 2489835 2492177 . + . ID=gene-PHA56_RS11865;Name=vgrG;gbkey=Gene;gene=vgrG;gene_biotype=protein_coding;locus_tag=PHA56_RS11865;old_locus_tag=PHA56_11870 NZ_CP116214.1 Protein Homology CDS 2489835 2492177 . + 0 ID=cds-WP_038424623.1;Parent=gene-PHA56_RS11865;Dbxref=Genbank:WP_038424623.1;Name=WP_038424623.1;gbkey=CDS;gene=vgrG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014838709.1;locus_tag=PHA56_RS11865;product=type VI secretion system Vgr family protein;protein_id=WP_038424623.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2492177 2493049 . + . ID=gene-PHA56_RS11870;Name=PHA56_RS11870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS11870;old_locus_tag=PHA56_11875 NZ_CP116214.1 Protein Homology CDS 2492177 2493049 . + 0 ID=cds-WP_038424622.1;Parent=gene-PHA56_RS11870;Dbxref=Genbank:WP_038424622.1;Name=WP_038424622.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014838708.1;locus_tag=PHA56_RS11870;product=hypothetical protein;protein_id=WP_038424622.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2493074 2496193 . + . ID=gene-PHA56_RS11875;Name=PHA56_RS11875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS11875;old_locus_tag=PHA56_11880 NZ_CP116214.1 Protein Homology CDS 2493074 2496193 . + 0 ID=cds-WP_038424621.1;Parent=gene-PHA56_RS11875;Dbxref=Genbank:WP_038424621.1;Name=WP_038424621.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229663.1;locus_tag=PHA56_RS11875;product=hypothetical protein;protein_id=WP_038424621.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2496294 2497034 . + . ID=gene-PHA56_RS11880;Name=PHA56_RS11880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS11880;old_locus_tag=PHA56_11885 NZ_CP116214.1 Protein Homology CDS 2496294 2497034 . + 0 ID=cds-WP_119834492.1;Parent=gene-PHA56_RS11880;Dbxref=Genbank:WP_119834492.1;Name=WP_119834492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014838705.1;locus_tag=PHA56_RS11880;product=hypothetical protein;protein_id=WP_119834492.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2497139 2497903 . + . ID=gene-PHA56_RS11885;Name=PHA56_RS11885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS11885;old_locus_tag=PHA56_11890 NZ_CP116214.1 Protein Homology CDS 2497139 2497903 . + 0 ID=cds-WP_038424619.1;Parent=gene-PHA56_RS11885;Dbxref=Genbank:WP_038424619.1;Name=WP_038424619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229662.1;locus_tag=PHA56_RS11885;product=hypothetical protein;protein_id=WP_038424619.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2498008 2498760 . + . ID=gene-PHA56_RS11890;Name=PHA56_RS11890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS11890;old_locus_tag=PHA56_11895 NZ_CP116214.1 Protein Homology CDS 2498008 2498760 . + 0 ID=cds-WP_076752298.1;Parent=gene-PHA56_RS11890;Dbxref=Genbank:WP_076752298.1;Name=WP_076752298.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229659.1;locus_tag=PHA56_RS11890;product=hypothetical protein;protein_id=WP_076752298.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2498782 2501919 . + . ID=gene-PHA56_RS11895;Name=PHA56_RS11895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS11895;old_locus_tag=PHA56_11900 NZ_CP116214.1 Protein Homology CDS 2498782 2501919 . + 0 ID=cds-WP_119834490.1;Parent=gene-PHA56_RS11895;Dbxref=Genbank:WP_119834490.1;Name=WP_119834490.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014838702.1;locus_tag=PHA56_RS11895;product=hypothetical protein;protein_id=WP_119834490.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2501931 2502737 . + . ID=gene-PHA56_RS11900;Name=PHA56_RS11900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS11900;old_locus_tag=PHA56_11905 NZ_CP116214.1 Protein Homology CDS 2501931 2502737 . + 0 ID=cds-WP_038424617.1;Parent=gene-PHA56_RS11900;Dbxref=Genbank:WP_038424617.1;Name=WP_038424617.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229657.1;locus_tag=PHA56_RS11900;product=hypothetical protein;protein_id=WP_038424617.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2502771 2503580 . + . ID=gene-PHA56_RS11905;Name=PHA56_RS11905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS11905;old_locus_tag=PHA56_11910 NZ_CP116214.1 Protein Homology CDS 2502771 2503580 . + 0 ID=cds-WP_042945317.1;Parent=gene-PHA56_RS11905;Dbxref=Genbank:WP_042945317.1;Name=WP_042945317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229654.1;locus_tag=PHA56_RS11905;product=hypothetical protein;protein_id=WP_042945317.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2503614 2504414 . + . ID=gene-PHA56_RS11910;Name=PHA56_RS11910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS11910;old_locus_tag=PHA56_11915 NZ_CP116214.1 Protein Homology CDS 2503614 2504414 . + 0 ID=cds-WP_038424616.1;Parent=gene-PHA56_RS11910;Dbxref=Genbank:WP_038424616.1;Name=WP_038424616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229654.1;locus_tag=PHA56_RS11910;product=hypothetical protein;protein_id=WP_038424616.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2504448 2505257 . + . ID=gene-PHA56_RS11915;Name=PHA56_RS11915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS11915;old_locus_tag=PHA56_11920 NZ_CP116214.1 Protein Homology CDS 2504448 2505257 . + 0 ID=cds-WP_032719392.1;Parent=gene-PHA56_RS11915;Dbxref=Genbank:WP_032719392.1;Name=WP_032719392.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229653.1;locus_tag=PHA56_RS11915;product=hypothetical protein;protein_id=WP_032719392.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2505344 2506567 . + . ID=gene-PHA56_RS11920;Name=PHA56_RS11920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS11920;old_locus_tag=PHA56_11925 NZ_CP116214.1 Protein Homology CDS 2505344 2506567 . + 0 ID=cds-WP_038424615.1;Parent=gene-PHA56_RS11920;Dbxref=Genbank:WP_038424615.1;Name=WP_038424615.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229652.1;locus_tag=PHA56_RS11920;product=hypothetical protein;protein_id=WP_038424615.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2506564 2510034 . + . ID=gene-PHA56_RS11925;Name=PHA56_RS11925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS11925;old_locus_tag=PHA56_11930 NZ_CP116214.1 Protein Homology CDS 2506564 2510034 . + 0 ID=cds-WP_038424614.1;Parent=gene-PHA56_RS11925;Dbxref=Genbank:WP_038424614.1;Name=WP_038424614.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229651.1;locus_tag=PHA56_RS11925;product=ImcF-related family protein;protein_id=WP_038424614.1;transl_table=11 NZ_CP116214.1 RefSeq pseudogene 2510034 2510243 . + . ID=gene-PHA56_RS11930;Name=PHA56_RS11930;end_range=2510243,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS11930;old_locus_tag=PHA56_11935;partial=true;pseudo=true NZ_CP116214.1 Protein Homology CDS 2510034 2510243 . + 0 ID=cds-PHA56_RS11930;Parent=gene-PHA56_RS11930;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2510243,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001536305.1;locus_tag=PHA56_RS11930;partial=true;product=type VI secretion system protein TssA;pseudo=true;transl_table=11 NZ_CP116214.1 RefSeq gene 2510321 2510548 . + . ID=gene-PHA56_RS11935;Name=PHA56_RS11935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS11935;old_locus_tag=PHA56_11940 NZ_CP116214.1 Protein Homology CDS 2510321 2510548 . + 0 ID=cds-WP_032719378.1;Parent=gene-PHA56_RS11935;Dbxref=Genbank:WP_032719378.1;Name=WP_032719378.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229649.1;locus_tag=PHA56_RS11935;product=hypothetical protein;protein_id=WP_032719378.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2510524 2510802 . + . ID=gene-PHA56_RS11940;Name=PHA56_RS11940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS11940;old_locus_tag=PHA56_11945 NZ_CP116214.1 Protein Homology CDS 2510524 2510802 . + 0 ID=cds-WP_071889106.1;Parent=gene-PHA56_RS11940;Dbxref=Genbank:WP_071889106.1;Name=WP_071889106.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002434027.1;locus_tag=PHA56_RS11940;product=PAAR domain-containing protein;protein_id=WP_071889106.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2510902 2512656 . + . ID=gene-PHA56_RS11945;Name=tssF;gbkey=Gene;gene=tssF;gene_biotype=protein_coding;locus_tag=PHA56_RS11945;old_locus_tag=PHA56_11950 NZ_CP116214.1 Protein Homology CDS 2510902 2512656 . + 0 ID=cds-WP_038424613.1;Parent=gene-PHA56_RS11945;Dbxref=Genbank:WP_038424613.1;Name=WP_038424613.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssF;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226617.1;locus_tag=PHA56_RS11945;product=type VI secretion system baseplate subunit TssF;protein_id=WP_038424613.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2512620 2513705 . + . ID=gene-PHA56_RS11950;Name=tssG;gbkey=Gene;gene=tssG;gene_biotype=protein_coding;locus_tag=PHA56_RS11950;old_locus_tag=PHA56_11955 NZ_CP116214.1 Protein Homology CDS 2512620 2513705 . + 0 ID=cds-WP_076752297.1;Parent=gene-PHA56_RS11950;Dbxref=Genbank:WP_076752297.1;Name=WP_076752297.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssG;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226618.1;locus_tag=PHA56_RS11950;product=type VI secretion system baseplate subunit TssG;protein_id=WP_076752297.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2513683 2514228 . + . ID=gene-PHA56_RS11955;Name=tssJ;gbkey=Gene;gene=tssJ;gene_biotype=protein_coding;locus_tag=PHA56_RS11955;old_locus_tag=PHA56_11960 NZ_CP116214.1 Protein Homology CDS 2513683 2514228 . + 0 ID=cds-WP_032692931.1;Parent=gene-PHA56_RS11955;Dbxref=Genbank:WP_032692931.1;Name=WP_032692931.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssJ;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014838696.1;locus_tag=PHA56_RS11955;product=type VI secretion system lipoprotein TssJ;protein_id=WP_032692931.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2514730 2515818 . + . ID=gene-PHA56_RS11960;Name=PHA56_RS11960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS11960;old_locus_tag=PHA56_11965 NZ_CP116214.1 Protein Homology CDS 2514730 2515818 . + 0 ID=cds-WP_038424611.1;Parent=gene-PHA56_RS11960;Dbxref=Genbank:WP_038424611.1;Name=WP_038424611.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227367.1;locus_tag=PHA56_RS11960;product=ABC transporter substrate-binding protein;protein_id=WP_038424611.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2515890 2517659 . + . ID=gene-PHA56_RS11965;Name=PHA56_RS11965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS11965;old_locus_tag=PHA56_11970 NZ_CP116214.1 Protein Homology CDS 2515890 2517659 . + 0 ID=cds-WP_025105882.1;Parent=gene-PHA56_RS11965;Dbxref=Genbank:WP_025105882.1;Name=WP_025105882.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227366.1;locus_tag=PHA56_RS11965;product=iron ABC transporter permease;protein_id=WP_025105882.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2517652 2518722 . + . ID=gene-PHA56_RS11970;Name=PHA56_RS11970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS11970;old_locus_tag=PHA56_11975 NZ_CP116214.1 Protein Homology CDS 2517652 2518722 . + 0 ID=cds-WP_032692928.1;Parent=gene-PHA56_RS11970;Dbxref=Genbank:WP_032692928.1;Name=WP_032692928.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014838694.1;locus_tag=PHA56_RS11970;product=ABC transporter ATP-binding protein;protein_id=WP_032692928.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2518779 2519549 . - . ID=gene-PHA56_RS11975;Name=PHA56_RS11975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS11975;old_locus_tag=PHA56_11980 NZ_CP116214.1 Protein Homology CDS 2518779 2519549 . - 0 ID=cds-WP_032692927.1;Parent=gene-PHA56_RS11975;Dbxref=Genbank:WP_032692927.1;Name=WP_032692927.1;Ontology_term=GO:0045150,GO:0019152;gbkey=CDS;go_function=acetoin dehydrogenase activity|0019152||IEA;go_process=acetoin catabolic process|0045150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227341.1;locus_tag=PHA56_RS11975;product=(S)-acetoin forming diacetyl reductase;protein_id=WP_032692927.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2519573 2521252 . - . ID=gene-PHA56_RS11980;Name=alsS;gbkey=Gene;gene=alsS;gene_biotype=protein_coding;locus_tag=PHA56_RS11980;old_locus_tag=PHA56_11985 NZ_CP116214.1 Protein Homology CDS 2519573 2521252 . - 0 ID=cds-WP_014229641.1;Parent=gene-PHA56_RS11980;Dbxref=Genbank:WP_014229641.1;Name=WP_014229641.1;Ontology_term=GO:0006113,GO:0045151,GO:0003984;gbkey=CDS;gene=alsS;go_function=acetolactate synthase activity|0003984||IEA;go_process=fermentation|0006113||IEA,acetoin biosynthetic process|0045151||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227340.1;locus_tag=PHA56_RS11980;product=acetolactate synthase AlsS;protein_id=WP_014229641.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2521263 2522042 . - . ID=gene-PHA56_RS11985;Name=budA;gbkey=Gene;gene=budA;gene_biotype=protein_coding;locus_tag=PHA56_RS11985;old_locus_tag=PHA56_11990 NZ_CP116214.1 Protein Homology CDS 2521263 2522042 . - 0 ID=cds-WP_038424609.1;Parent=gene-PHA56_RS11985;Dbxref=Genbank:WP_038424609.1;Name=WP_038424609.1;Ontology_term=GO:0006113,GO:0045151,GO:0047605;gbkey=CDS;gene=budA;go_function=acetolactate decarboxylase activity|0047605||IEA;go_process=fermentation|0006113||IEA,acetoin biosynthetic process|0045151||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004180260.1;locus_tag=PHA56_RS11985;product=acetolactate decarboxylase;protein_id=WP_038424609.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2522149 2523021 . + . ID=gene-PHA56_RS11990;Name=PHA56_RS11990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS11990;old_locus_tag=PHA56_11995 NZ_CP116214.1 Protein Homology CDS 2522149 2523021 . + 0 ID=cds-WP_014229640.1;Parent=gene-PHA56_RS11990;Dbxref=Genbank:WP_014229640.1;Name=WP_014229640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227338.1;locus_tag=PHA56_RS11990;product=LysR family transcriptional regulator;protein_id=WP_014229640.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2523050 2523262 . - . ID=gene-PHA56_RS11995;Name=cspF;gbkey=Gene;gene=cspF;gene_biotype=protein_coding;locus_tag=PHA56_RS11995;old_locus_tag=PHA56_12000 NZ_CP116214.1 Protein Homology CDS 2523050 2523262 . - 0 ID=cds-WP_004136705.1;Parent=gene-PHA56_RS11995;Dbxref=Genbank:WP_004136705.1;Name=WP_004136705.1;gbkey=CDS;gene=cspF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460213.1;locus_tag=PHA56_RS11995;product=cold shock-like protein CspF;protein_id=WP_004136705.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2523210 2523488 . + . ID=gene-PHA56_RS12000;Name=PHA56_RS12000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS12000;old_locus_tag=PHA56_12005 NZ_CP116214.1 GeneMarkS-2+ CDS 2523210 2523488 . + 0 ID=cds-WP_162097154.1;Parent=gene-PHA56_RS12000;Dbxref=Genbank:WP_162097154.1;Name=WP_162097154.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PHA56_RS12000;product=hypothetical protein;protein_id=WP_162097154.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2523433 2523603 . - . ID=gene-PHA56_RS12005;Name=PHA56_RS12005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS12005;old_locus_tag=PHA56_12010 NZ_CP116214.1 Protein Homology CDS 2523433 2523603 . - 0 ID=cds-WP_213220741.1;Parent=gene-PHA56_RS12005;Dbxref=Genbank:WP_213220741.1;Name=WP_213220741.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF038384.1;locus_tag=PHA56_RS12005;product=YnfU family zinc-binding protein;protein_id=WP_213220741.1;transl_table=11 NZ_CP116214.1 RefSeq pseudogene 2523969 2524166 . + . ID=gene-PHA56_RS12010;Name=PHA56_RS12010;end_range=2524166,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS12010;old_locus_tag=PHA56_12015;partial=true;pseudo=true;start_range=.,2523969 NZ_CP116214.1 Protein Homology CDS 2523969 2524166 . + 0 ID=cds-PHA56_RS12010;Parent=gene-PHA56_RS12010;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=2524166,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009652089.1;locus_tag=PHA56_RS12010;partial=true;product=sodium:proton antiporter;pseudo=true;start_range=.,2523969;transl_table=11 NZ_CP116214.1 RefSeq gene 2524227 2524367 . - . ID=gene-PHA56_RS12015;Name=PHA56_RS12015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS12015;old_locus_tag=PHA56_12020 NZ_CP116214.1 Protein Homology CDS 2524227 2524367 . - 0 ID=cds-WP_119834491.1;Parent=gene-PHA56_RS12015;Dbxref=Genbank:WP_119834491.1;Name=WP_119834491.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227329.1;locus_tag=PHA56_RS12015;product=hypothetical protein;protein_id=WP_119834491.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2524683 2525591 . + . ID=gene-PHA56_RS12020;Name=PHA56_RS12020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS12020;old_locus_tag=PHA56_12025 NZ_CP116214.1 Protein Homology CDS 2524683 2525591 . + 0 ID=cds-WP_014838691.1;Parent=gene-PHA56_RS12020;Dbxref=Genbank:WP_014838691.1;Name=WP_014838691.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014838691.1;locus_tag=PHA56_RS12020;product=DUF535 family protein;protein_id=WP_014838691.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2525706 2525876 . - . ID=gene-PHA56_RS12025;Name=PHA56_RS12025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS12025;old_locus_tag=PHA56_12030 NZ_CP116214.1 Protein Homology CDS 2525706 2525876 . - 0 ID=cds-WP_236944024.1;Parent=gene-PHA56_RS12025;Dbxref=Genbank:WP_236944024.1;Name=WP_236944024.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF027307.2;locus_tag=PHA56_RS12025;product=helix-turn-helix domain-containing protein;protein_id=WP_236944024.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2526207 2526377 . - . ID=gene-PHA56_RS12030;Name=PHA56_RS12030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS12030;old_locus_tag=PHA56_12035 NZ_CP116214.1 Protein Homology CDS 2526207 2526377 . - 0 ID=cds-WP_236944024.1-2;Parent=gene-PHA56_RS12030;Dbxref=Genbank:WP_236944024.1;Name=WP_236944024.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF027307.2;locus_tag=PHA56_RS12030;product=helix-turn-helix domain-containing protein;protein_id=WP_236944024.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2526708 2527379 . - . ID=gene-PHA56_RS12035;Name=PHA56_RS12035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS12035;old_locus_tag=PHA56_12040 NZ_CP116214.1 Protein Homology CDS 2526708 2527379 . - 0 ID=cds-WP_014229637.1;Parent=gene-PHA56_RS12035;Dbxref=Genbank:WP_014229637.1;Name=WP_014229637.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229637.1;locus_tag=PHA56_RS12035;product=helix-turn-helix domain-containing protein;protein_id=WP_014229637.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2527784 2528335 . + . ID=gene-PHA56_RS12040;Name=PHA56_RS12040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS12040;old_locus_tag=PHA56_12045 NZ_CP116214.1 Protein Homology CDS 2527784 2528335 . + 0 ID=cds-WP_014838689.1;Parent=gene-PHA56_RS12040;Dbxref=Genbank:WP_014838689.1;Name=WP_014838689.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014838689.1;locus_tag=PHA56_RS12040;product=tyrosine-type DNA invertase;protein_id=WP_014838689.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2528373 2528900 . - . ID=gene-PHA56_RS12045;Name=PHA56_RS12045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS12045;old_locus_tag=PHA56_12050 NZ_CP116214.1 Protein Homology CDS 2528373 2528900 . - 0 ID=cds-WP_014229635.1;Parent=gene-PHA56_RS12045;Dbxref=Genbank:WP_014229635.1;Name=WP_014229635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004851617.1;locus_tag=PHA56_RS12045;product=fimbrial protein;protein_id=WP_014229635.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2528946 2529947 . - . ID=gene-PHA56_RS12050;Name=PHA56_RS12050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS12050;old_locus_tag=PHA56_12055 NZ_CP116214.1 Protein Homology CDS 2528946 2529947 . - 0 ID=cds-WP_014229634.1;Parent=gene-PHA56_RS12050;Dbxref=Genbank:WP_014229634.1;Name=WP_014229634.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009652081.1;locus_tag=PHA56_RS12050;product=fimbrial protein;protein_id=WP_014229634.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2529963 2532533 . - . ID=gene-PHA56_RS12055;Name=PHA56_RS12055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS12055;old_locus_tag=PHA56_12060 NZ_CP116214.1 Protein Homology CDS 2529963 2532533 . - 0 ID=cds-WP_038424608.1;Parent=gene-PHA56_RS12055;Dbxref=Genbank:WP_038424608.1;Name=WP_038424608.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004851613.1;locus_tag=PHA56_RS12055;product=fimbrial biogenesis outer membrane usher protein;protein_id=WP_038424608.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2532593 2533282 . - . ID=gene-PHA56_RS12060;Name=PHA56_RS12060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS12060;old_locus_tag=PHA56_12065 NZ_CP116214.1 Protein Homology CDS 2532593 2533282 . - 0 ID=cds-WP_119834743.1;Parent=gene-PHA56_RS12060;Dbxref=Genbank:WP_119834743.1;Name=WP_119834743.1;Ontology_term=GO:0071555,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009652091.1;locus_tag=PHA56_RS12060;product=fimbria/pilus periplasmic chaperone;protein_id=WP_119834743.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2533383 2533901 . - . ID=gene-PHA56_RS12065;Name=PHA56_RS12065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS12065;old_locus_tag=PHA56_12070 NZ_CP116214.1 Protein Homology CDS 2533383 2533901 . - 0 ID=cds-WP_014229631.1;Parent=gene-PHA56_RS12065;Dbxref=Genbank:WP_014229631.1;Name=WP_014229631.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229631.1;locus_tag=PHA56_RS12065;product=fimbrial protein;protein_id=WP_014229631.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2534358 2534906 . - . ID=gene-PHA56_RS12070;Name=PHA56_RS12070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS12070;old_locus_tag=PHA56_12075 NZ_CP116214.1 Protein Homology CDS 2534358 2534906 . - 0 ID=cds-WP_014229630.1;Parent=gene-PHA56_RS12070;Dbxref=Genbank:WP_014229630.1;Name=WP_014229630.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004851606.1;locus_tag=PHA56_RS12070;product=tyrosine-type DNA invertase;protein_id=WP_014229630.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2535332 2537737 . + . ID=gene-PHA56_RS12075;Name=PHA56_RS12075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS12075;old_locus_tag=PHA56_12080 NZ_CP116214.1 Protein Homology CDS 2535332 2537737 . + 0 ID=cds-WP_038424606.1;Parent=gene-PHA56_RS12075;Dbxref=Genbank:WP_038424606.1;Name=WP_038424606.1;Ontology_term=GO:0016491,GO:0048038,GO:0016020,GO:0030288;gbkey=CDS;go_component=membrane|0016020||IEA,outer membrane-bounded periplasmic space|0030288||IEA;go_function=oxidoreductase activity|0016491||IEA,quinone binding|0048038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004119354.1;locus_tag=PHA56_RS12075;product=membrane-bound PQQ-dependent dehydrogenase%2C glucose/quinate/shikimate family;protein_id=WP_038424606.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2537812 2538777 . - . ID=gene-PHA56_RS12080;Name=PHA56_RS12080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS12080;old_locus_tag=PHA56_12085 NZ_CP116214.1 Protein Homology CDS 2537812 2538777 . - 0 ID=cds-WP_025105867.1;Parent=gene-PHA56_RS12080;Dbxref=Genbank:WP_025105867.1;Name=WP_025105867.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009652072.1;locus_tag=PHA56_RS12080;product=ATP-binding cassette domain-containing protein;protein_id=WP_025105867.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2538774 2539754 . - . ID=gene-PHA56_RS12085;Name=PHA56_RS12085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS12085;old_locus_tag=PHA56_12090 NZ_CP116214.1 Protein Homology CDS 2538774 2539754 . - 0 ID=cds-WP_038424605.1;Parent=gene-PHA56_RS12085;Dbxref=Genbank:WP_038424605.1;Name=WP_038424605.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014838682.1;locus_tag=PHA56_RS12085;product=ABC transporter ATP-binding protein;protein_id=WP_038424605.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2539751 2540701 . - . ID=gene-PHA56_RS12090;Name=PHA56_RS12090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS12090;old_locus_tag=PHA56_12095 NZ_CP116214.1 Protein Homology CDS 2539751 2540701 . - 0 ID=cds-WP_025105865.1;Parent=gene-PHA56_RS12090;Dbxref=Genbank:WP_025105865.1;Name=WP_025105865.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227302.1;locus_tag=PHA56_RS12090;product=ABC transporter permease;protein_id=WP_025105865.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2540698 2541657 . - . ID=gene-PHA56_RS12095;Name=PHA56_RS12095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS12095;old_locus_tag=PHA56_12100 NZ_CP116214.1 Protein Homology CDS 2540698 2541657 . - 0 ID=cds-WP_038424604.1;Parent=gene-PHA56_RS12095;Dbxref=Genbank:WP_038424604.1;Name=WP_038424604.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227301.1;locus_tag=PHA56_RS12095;product=ABC transporter permease;protein_id=WP_038424604.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2541701 2543404 . - . ID=gene-PHA56_RS12100;Name=PHA56_RS12100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS12100;old_locus_tag=PHA56_12105 NZ_CP116214.1 Protein Homology CDS 2541701 2543404 . - 0 ID=cds-WP_038424603.1;Parent=gene-PHA56_RS12100;Dbxref=Genbank:WP_038424603.1;Name=WP_038424603.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227300.1;locus_tag=PHA56_RS12100;product=ABC transporter substrate-binding protein;protein_id=WP_038424603.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2543674 2544312 . - . ID=gene-PHA56_RS12105;Name=PHA56_RS12105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS12105;old_locus_tag=PHA56_12110 NZ_CP116214.1 Protein Homology CDS 2543674 2544312 . - 0 ID=cds-WP_014838680.1;Parent=gene-PHA56_RS12105;Dbxref=Genbank:WP_014838680.1;Name=WP_014838680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004102761.1;locus_tag=PHA56_RS12105;product=CatA-like O-acetyltransferase%2C family 1;protein_id=WP_014838680.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2544343 2544726 . - . ID=gene-PHA56_RS12110;Name=PHA56_RS12110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS12110;old_locus_tag=PHA56_12115 NZ_CP116214.1 Protein Homology CDS 2544343 2544726 . - 0 ID=cds-WP_004851590.1;Parent=gene-PHA56_RS12110;Dbxref=Genbank:WP_004851590.1;Name=WP_004851590.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227298.1;locus_tag=PHA56_RS12110;product=VOC family protein;protein_id=WP_004851590.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2544820 2545590 . + . ID=gene-PHA56_RS12115;Name=PHA56_RS12115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS12115;old_locus_tag=PHA56_12120 NZ_CP116214.1 Protein Homology CDS 2544820 2545590 . + 0 ID=cds-WP_004851588.1;Parent=gene-PHA56_RS12115;Dbxref=Genbank:WP_004851588.1;Name=WP_004851588.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227297.1;locus_tag=PHA56_RS12115;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_004851588.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2545604 2546233 . - . ID=gene-PHA56_RS12120;Name=PHA56_RS12120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS12120;old_locus_tag=PHA56_12125 NZ_CP116214.1 Protein Homology CDS 2545604 2546233 . - 0 ID=cds-WP_032692917.1;Parent=gene-PHA56_RS12120;Dbxref=Genbank:WP_032692917.1;Name=WP_032692917.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227296.1;locus_tag=PHA56_RS12120;product=LysE family transporter;protein_id=WP_032692917.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2546458 2547093 . + . ID=gene-PHA56_RS12125;Name=PHA56_RS12125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS12125;old_locus_tag=PHA56_12130 NZ_CP116214.1 Protein Homology CDS 2546458 2547093 . + 0 ID=cds-WP_004119381.1;Parent=gene-PHA56_RS12125;Dbxref=Genbank:WP_004119381.1;Name=WP_004119381.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227295.1;locus_tag=PHA56_RS12125;product=carbonic anhydrase;protein_id=WP_004119381.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2547200 2548006 . + . ID=gene-PHA56_RS12130;Name=PHA56_RS12130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS12130;old_locus_tag=PHA56_12135 NZ_CP116214.1 Protein Homology CDS 2547200 2548006 . + 0 ID=cds-WP_014838678.1;Parent=gene-PHA56_RS12130;Dbxref=Genbank:WP_014838678.1;Name=WP_014838678.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014838678.1;locus_tag=PHA56_RS12130;product=MBL fold metallo-hydrolase;protein_id=WP_014838678.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2548028 2548912 . - . ID=gene-PHA56_RS12135;Name=PHA56_RS12135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS12135;old_locus_tag=PHA56_12140 NZ_CP116214.1 Protein Homology CDS 2548028 2548912 . - 0 ID=cds-WP_014229621.1;Parent=gene-PHA56_RS12135;Dbxref=Genbank:WP_014229621.1;Name=WP_014229621.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017382876.1;locus_tag=PHA56_RS12135;product=SDR family oxidoreductase;protein_id=WP_014229621.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2549286 2549678 . + . ID=gene-PHA56_RS12140;Name=PHA56_RS12140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS12140;old_locus_tag=PHA56_12145 NZ_CP116214.1 Protein Homology CDS 2549286 2549678 . + 0 ID=cds-WP_014229620.1;Parent=gene-PHA56_RS12140;Dbxref=Genbank:WP_014229620.1;Name=WP_014229620.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004136740.1;locus_tag=PHA56_RS12140;product=YdeI family stress tolerance OB fold protein;protein_id=WP_014229620.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2549700 2549849 . + . ID=gene-PHA56_RS12145;Name=PHA56_RS12145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS12145;old_locus_tag=PHA56_12150 NZ_CP116214.1 Protein Homology CDS 2549700 2549849 . + 0 ID=cds-WP_162933673.1;Parent=gene-PHA56_RS12145;Dbxref=Genbank:WP_162933673.1;Name=WP_162933673.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004851580.1;locus_tag=PHA56_RS12145;product=hypothetical protein;protein_id=WP_162933673.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2549887 2551497 . - . ID=gene-PHA56_RS12150;Name=PHA56_RS12150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS12150;old_locus_tag=PHA56_12155 NZ_CP116214.1 Protein Homology CDS 2549887 2551497 . - 0 ID=cds-WP_076752601.1;Parent=gene-PHA56_RS12150;Dbxref=Genbank:WP_076752601.1;Name=WP_076752601.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001602606.1;locus_tag=PHA56_RS12150;product=FAD-NAD(P)-binding protein;protein_id=WP_076752601.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2551734 2551940 . - . ID=gene-PHA56_RS12155;Name=PHA56_RS12155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS12155;old_locus_tag=PHA56_12160 NZ_CP116214.1 Protein Homology CDS 2551734 2551940 . - 0 ID=cds-WP_032719240.1;Parent=gene-PHA56_RS12155;Dbxref=Genbank:WP_032719240.1;Name=WP_032719240.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019041.2;locus_tag=PHA56_RS12155;product=transcriptional regulator;protein_id=WP_032719240.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2552100 2552603 . + . ID=gene-PHA56_RS12160;Name=PHA56_RS12160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS12160;old_locus_tag=PHA56_12165 NZ_CP116214.1 Protein Homology CDS 2552100 2552603 . + 0 ID=cds-WP_038424602.1;Parent=gene-PHA56_RS12160;Dbxref=Genbank:WP_038424602.1;Name=WP_038424602.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014838676.1;locus_tag=PHA56_RS12160;product=hypothetical protein;protein_id=WP_038424602.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2552613 2553059 . + . ID=gene-PHA56_RS12165;Name=PHA56_RS12165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS12165;old_locus_tag=PHA56_12170 NZ_CP116214.1 Protein Homology CDS 2552613 2553059 . + 0 ID=cds-WP_004136748.1;Parent=gene-PHA56_RS12165;Dbxref=Genbank:WP_004136748.1;Name=WP_004136748.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004102722.1;locus_tag=PHA56_RS12165;product=DUF421 domain-containing protein;protein_id=WP_004136748.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2553072 2553590 . + . ID=gene-PHA56_RS12170;Name=PHA56_RS12170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS12170;old_locus_tag=PHA56_12175 NZ_CP116214.1 Protein Homology CDS 2553072 2553590 . + 0 ID=cds-WP_009653693.1;Parent=gene-PHA56_RS12170;Dbxref=Genbank:WP_009653693.1;Name=WP_009653693.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004136749.1;locus_tag=PHA56_RS12170;product=2-oxo-tetronate isomerase;protein_id=WP_009653693.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2553613 2554602 . + . ID=gene-PHA56_RS12175;Name=PHA56_RS12175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS12175;old_locus_tag=PHA56_12180 NZ_CP116214.1 Protein Homology CDS 2553613 2554602 . + 0 ID=cds-WP_076752293.1;Parent=gene-PHA56_RS12175;Dbxref=Genbank:WP_076752293.1;Name=WP_076752293.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016810083.1;locus_tag=PHA56_RS12175;product=SDR family oxidoreductase;protein_id=WP_076752293.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2554599 2556224 . - . ID=gene-PHA56_RS12180;Name=PHA56_RS12180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS12180;old_locus_tag=PHA56_12185 NZ_CP116214.1 Protein Homology CDS 2554599 2556224 . - 0 ID=cds-WP_038424600.1;Parent=gene-PHA56_RS12180;Dbxref=Genbank:WP_038424600.1;Name=WP_038424600.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017145740.1;locus_tag=PHA56_RS12180;product=alpha-amylase family protein;protein_id=WP_038424600.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2556233 2557243 . - . ID=gene-PHA56_RS12185;Name=cydB;gbkey=Gene;gene=cydB;gene_biotype=protein_coding;locus_tag=PHA56_RS12185;old_locus_tag=PHA56_12190 NZ_CP116214.1 Protein Homology CDS 2556233 2557243 . - 0 ID=cds-WP_032692915.1;Parent=gene-PHA56_RS12185;Dbxref=Genbank:WP_032692915.1;Name=WP_032692915.1;Ontology_term=GO:0016682;gbkey=CDS;gene=cydB;go_function=oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226334.1;locus_tag=PHA56_RS12185;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_032692915.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2557243 2558646 . - . ID=gene-PHA56_RS12190;Name=PHA56_RS12190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS12190;old_locus_tag=PHA56_12195 NZ_CP116214.1 Protein Homology CDS 2557243 2558646 . - 0 ID=cds-WP_014229613.1;Parent=gene-PHA56_RS12190;Dbxref=Genbank:WP_014229613.1;Name=WP_014229613.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227205.1;locus_tag=PHA56_RS12190;product=cytochrome ubiquinol oxidase subunit I;protein_id=WP_014229613.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2558719 2559591 . - . ID=gene-PHA56_RS12195;Name=PHA56_RS12195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS12195;old_locus_tag=PHA56_12200 NZ_CP116214.1 Protein Homology CDS 2558719 2559591 . - 0 ID=cds-WP_014229612.1;Parent=gene-PHA56_RS12195;Dbxref=Genbank:WP_014229612.1;Name=WP_014229612.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006811848.1;locus_tag=PHA56_RS12195;product=manganese catalase family protein;protein_id=WP_014229612.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2559611 2560117 . - . ID=gene-PHA56_RS12200;Name=PHA56_RS12200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS12200;old_locus_tag=PHA56_12205 NZ_CP116214.1 Protein Homology CDS 2559611 2560117 . - 0 ID=cds-WP_009653688.1;Parent=gene-PHA56_RS12200;Dbxref=Genbank:WP_009653688.1;Name=WP_009653688.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226331.1;locus_tag=PHA56_RS12200;product=ferritin-like domain-containing protein;protein_id=WP_009653688.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2560150 2560647 . - . ID=gene-PHA56_RS12205;Name=PHA56_RS12205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS12205;old_locus_tag=PHA56_12210 NZ_CP116214.1 Protein Homology CDS 2560150 2560647 . - 0 ID=cds-WP_014229611.1;Parent=gene-PHA56_RS12205;Dbxref=Genbank:WP_014229611.1;Name=WP_014229611.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229611.1;locus_tag=PHA56_RS12205;product=ferritin-like domain-containing protein;protein_id=WP_014229611.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2560736 2560921 . - . ID=gene-PHA56_RS12210;Name=PHA56_RS12210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS12210;old_locus_tag=PHA56_12215 NZ_CP116214.1 Protein Homology CDS 2560736 2560921 . - 0 ID=cds-WP_004136767.1;Parent=gene-PHA56_RS12210;Dbxref=Genbank:WP_004136767.1;Name=WP_004136767.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227107.1;locus_tag=PHA56_RS12210;product=general stress protein;protein_id=WP_004136767.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2561366 2561442 . - . ID=gene-PHA56_RS12215;Name=PHA56_RS12215;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA56_RS12215;old_locus_tag=PHA56_12220 NZ_CP116214.1 tRNAscan-SE tRNA 2561366 2561442 . - . ID=rna-PHA56_RS12215;Parent=gene-PHA56_RS12215;anticodon=(pos:complement(2561406..2561408));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS12215;product=tRNA-Val NZ_CP116214.1 tRNAscan-SE exon 2561366 2561442 . - . ID=exon-PHA56_RS12215-1;Parent=rna-PHA56_RS12215;anticodon=(pos:complement(2561406..2561408));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS12215;product=tRNA-Val NZ_CP116214.1 RefSeq gene 2561447 2561523 . - . ID=gene-PHA56_RS12220;Name=PHA56_RS12220;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA56_RS12220;old_locus_tag=PHA56_12225 NZ_CP116214.1 tRNAscan-SE tRNA 2561447 2561523 . - . ID=rna-PHA56_RS12220;Parent=gene-PHA56_RS12220;anticodon=(pos:complement(2561487..2561489));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS12220;product=tRNA-Val NZ_CP116214.1 tRNAscan-SE exon 2561447 2561523 . - . ID=exon-PHA56_RS12220-1;Parent=rna-PHA56_RS12220;anticodon=(pos:complement(2561487..2561489));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS12220;product=tRNA-Val NZ_CP116214.1 RefSeq gene 2561528 2561604 . - . ID=gene-PHA56_RS12225;Name=PHA56_RS12225;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA56_RS12225;old_locus_tag=PHA56_12230 NZ_CP116214.1 tRNAscan-SE tRNA 2561528 2561604 . - . ID=rna-PHA56_RS12225;Parent=gene-PHA56_RS12225;anticodon=(pos:complement(2561568..2561570));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS12225;product=tRNA-Val NZ_CP116214.1 tRNAscan-SE exon 2561528 2561604 . - . ID=exon-PHA56_RS12225-1;Parent=rna-PHA56_RS12225;anticodon=(pos:complement(2561568..2561570));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS12225;product=tRNA-Val NZ_CP116214.1 RefSeq gene 2561815 2563188 . - . ID=gene-PHA56_RS12230;Name=mdtK;gbkey=Gene;gene=mdtK;gene_biotype=protein_coding;locus_tag=PHA56_RS12230;old_locus_tag=PHA56_12235 NZ_CP116214.1 Protein Homology CDS 2561815 2563188 . - 0 ID=cds-WP_014229610.1;Parent=gene-PHA56_RS12230;Dbxref=Genbank:WP_014229610.1;Name=WP_014229610.1;gbkey=CDS;gene=mdtK;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227282.1;locus_tag=PHA56_RS12230;product=MdtK family multidrug efflux MATE transporter;protein_id=WP_014229610.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2563418 2564053 . + . ID=gene-PHA56_RS12235;Name=PHA56_RS12235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS12235;old_locus_tag=PHA56_12240 NZ_CP116214.1 Protein Homology CDS 2563418 2564053 . + 0 ID=cds-WP_004851490.1;Parent=gene-PHA56_RS12235;Dbxref=Genbank:WP_004851490.1;Name=WP_004851490.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016810089.1;locus_tag=PHA56_RS12235;product=riboflavin synthase;protein_id=WP_004851490.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2564083 2565231 . - . ID=gene-PHA56_RS12240;Name=cfa;gbkey=Gene;gene=cfa;gene_biotype=protein_coding;locus_tag=PHA56_RS12240;old_locus_tag=PHA56_12245 NZ_CP116214.1 Protein Homology CDS 2564083 2565231 . - 0 ID=cds-WP_014838673.1;Parent=gene-PHA56_RS12240;Dbxref=Genbank:WP_014838673.1;Name=WP_014838673.1;gbkey=CDS;gene=cfa;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227280.1;locus_tag=PHA56_RS12240;product=cyclopropane fatty acyl phospholipid synthase;protein_id=WP_014838673.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2565530 2566714 . - . ID=gene-PHA56_RS12245;Name=punC;gbkey=Gene;gene=punC;gene_biotype=protein_coding;locus_tag=PHA56_RS12245;old_locus_tag=PHA56_12250 NZ_CP116214.1 Protein Homology CDS 2565530 2566714 . - 0 ID=cds-WP_014229607.1;Parent=gene-PHA56_RS12245;Dbxref=Genbank:WP_014229607.1;Name=WP_014229607.1;Ontology_term=GO:1990961,GO:0042910,GO:0016020;gbkey=CDS;gene=punC;go_component=membrane|0016020||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009654751.1;locus_tag=PHA56_RS12245;product=purine nucleoside transporter PunC;protein_id=WP_014229607.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2566827 2567738 . + . ID=gene-PHA56_RS12250;Name=punR;gbkey=Gene;gene=punR;gene_biotype=protein_coding;locus_tag=PHA56_RS12250;old_locus_tag=PHA56_12255 NZ_CP116214.1 Protein Homology CDS 2566827 2567738 . + 0 ID=cds-WP_014229606.1;Parent=gene-PHA56_RS12250;Dbxref=Genbank:WP_014229606.1;Name=WP_014229606.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=punR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004862743.1;locus_tag=PHA56_RS12250;product=DNA-binding transcriptional activator PunR;protein_id=WP_014229606.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2567757 2568782 . - . ID=gene-PHA56_RS12255;Name=purR;gbkey=Gene;gene=purR;gene_biotype=protein_coding;locus_tag=PHA56_RS12255;old_locus_tag=PHA56_12260 NZ_CP116214.1 Protein Homology CDS 2567757 2568782 . - 0 ID=cds-WP_004851481.1;Parent=gene-PHA56_RS12255;Dbxref=Genbank:WP_004851481.1;Name=WP_004851481.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=purR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127190.1;locus_tag=PHA56_RS12255;product=HTH-type transcriptional repressor PurR;protein_id=WP_004851481.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2569079 2569168 . + . ID=gene-PHA56_RS12260;Name=PHA56_RS12260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS12260;old_locus_tag=PHA56_12265 NZ_CP116214.1 Protein Homology CDS 2569079 2569168 . + 0 ID=cds-WP_049082851.1;Parent=gene-PHA56_RS12260;Dbxref=Genbank:WP_049082851.1;Name=WP_049082851.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165321.1;locus_tag=PHA56_RS12260;product=YnhF family membrane protein;protein_id=WP_049082851.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2569334 2570500 . + . ID=gene-PHA56_RS12265;Name=PHA56_RS12265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS12265;old_locus_tag=PHA56_12270 NZ_CP116214.1 Protein Homology CDS 2569334 2570500 . + 0 ID=cds-WP_004851479.1;Parent=gene-PHA56_RS12265;Dbxref=Genbank:WP_004851479.1;Name=WP_004851479.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227277.1;locus_tag=PHA56_RS12265;product=MFS transporter;protein_id=WP_004851479.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2570557 2571138 . - . ID=gene-PHA56_RS12270;Name=sodB;gbkey=Gene;gene=sodB;gene_biotype=protein_coding;locus_tag=PHA56_RS12270;old_locus_tag=PHA56_12275 NZ_CP116214.1 Protein Homology CDS 2570557 2571138 . - 0 ID=cds-WP_004851476.1;Parent=gene-PHA56_RS12270;Dbxref=Genbank:WP_004851476.1;Name=WP_004851476.1;Ontology_term=GO:0006801,GO:0004784,GO:0046872;gbkey=CDS;gene=sodB;go_function=superoxide dismutase activity|0004784||IEA,metal ion binding|0046872||IEA;go_process=superoxide metabolic process|0006801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020079002.1;locus_tag=PHA56_RS12270;product=superoxide dismutase [Fe];protein_id=WP_004851476.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2571263 2572117 . - . ID=gene-PHA56_RS12275;Name=PHA56_RS12275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS12275;old_locus_tag=PHA56_12280 NZ_CP116214.1 Protein Homology CDS 2571263 2572117 . - 0 ID=cds-WP_014229604.1;Parent=gene-PHA56_RS12275;Dbxref=Genbank:WP_014229604.1;Name=WP_014229604.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012541517.1;locus_tag=PHA56_RS12275;product=C40 family peptidase;protein_id=WP_014229604.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2572457 2572804 . + . ID=gene-PHA56_RS12280;Name=grxD;gbkey=Gene;gene=grxD;gene_biotype=protein_coding;locus_tag=PHA56_RS12280;old_locus_tag=PHA56_12285 NZ_CP116214.1 Protein Homology CDS 2572457 2572804 . + 0 ID=cds-WP_004102692.1;Parent=gene-PHA56_RS12280;Dbxref=Genbank:WP_004102692.1;Name=WP_004102692.1;gbkey=CDS;gene=grxD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227273.1;locus_tag=PHA56_RS12280;product=monothiol glutaredoxin 4;protein_id=WP_004102692.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2572856 2573500 . - . ID=gene-PHA56_RS12285;Name=rnt;gbkey=Gene;gene=rnt;gene_biotype=protein_coding;locus_tag=PHA56_RS12285;old_locus_tag=PHA56_12290 NZ_CP116214.1 Protein Homology CDS 2572856 2573500 . - 0 ID=cds-WP_014229602.1;Parent=gene-PHA56_RS12285;Dbxref=Genbank:WP_014229602.1;Name=WP_014229602.1;Ontology_term=GO:0006364,GO:0042780,GO:0016896;gbkey=CDS;gene=rnt;go_function=exoribonuclease activity%2C producing 5'-phosphomonoesters|0016896||IEA;go_process=rRNA processing|0006364||IEA,tRNA 3'-end processing|0042780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229602.1;locus_tag=PHA56_RS12285;product=ribonuclease T;protein_id=WP_014229602.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2573607 2574014 . - . ID=gene-PHA56_RS12290;Name=gloA;gbkey=Gene;gene=gloA;gene_biotype=protein_coding;locus_tag=PHA56_RS12290;old_locus_tag=PHA56_12295 NZ_CP116214.1 Protein Homology CDS 2573607 2574014 . - 0 ID=cds-WP_004119471.1;Parent=gene-PHA56_RS12290;Dbxref=Genbank:WP_004119471.1;Name=WP_004119471.1;gbkey=CDS;gene=gloA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008500591.1;locus_tag=PHA56_RS12290;product=lactoylglutathione lyase;protein_id=WP_004119471.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2574094 2575191 . - . ID=gene-PHA56_RS12295;Name=PHA56_RS12295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS12295;old_locus_tag=PHA56_12300 NZ_CP116214.1 Protein Homology CDS 2574094 2575191 . - 0 ID=cds-WP_119834666.1;Parent=gene-PHA56_RS12295;Dbxref=Genbank:WP_119834666.1;Name=WP_119834666.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227270.1;locus_tag=PHA56_RS12295;product=alkene reductase;protein_id=WP_119834666.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2575245 2575844 . - . ID=gene-PHA56_RS12300;Name=PHA56_RS12300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS12300;old_locus_tag=PHA56_12305 NZ_CP116214.1 Protein Homology CDS 2575245 2575844 . - 0 ID=cds-WP_014838672.1;Parent=gene-PHA56_RS12300;Dbxref=Genbank:WP_014838672.1;Name=WP_014838672.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227269.1;locus_tag=PHA56_RS12300;product=TetR/AcrR family transcriptional regulator;protein_id=WP_014838672.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2575966 2576226 . + . ID=gene-PHA56_RS12305;Name=PHA56_RS12305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS12305;old_locus_tag=PHA56_12310 NZ_CP116214.1 Protein Homology CDS 2575966 2576226 . + 0 ID=cds-WP_162140793.1;Parent=gene-PHA56_RS12305;Dbxref=Genbank:WP_162140793.1;Name=WP_162140793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001447806.1;locus_tag=PHA56_RS12305;product=DUF1289 domain-containing protein;protein_id=WP_162140793.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2576275 2577171 . + . ID=gene-PHA56_RS12310;Name=PHA56_RS12310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS12310;old_locus_tag=PHA56_12315 NZ_CP116214.1 Protein Homology CDS 2576275 2577171 . + 0 ID=cds-WP_014838670.1;Parent=gene-PHA56_RS12310;Dbxref=Genbank:WP_014838670.1;Name=WP_014838670.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227267.1;locus_tag=PHA56_RS12310;product=aldo/keto reductase family oxidoreductase;protein_id=WP_014838670.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2577231 2577752 . + . ID=gene-PHA56_RS12315;Name=sodC;gbkey=Gene;gene=sodC;gene_biotype=protein_coding;locus_tag=PHA56_RS12315;old_locus_tag=PHA56_12320 NZ_CP116214.1 Protein Homology CDS 2577231 2577752 . + 0 ID=cds-WP_004119475.1;Parent=gene-PHA56_RS12315;Dbxref=Genbank:WP_004119475.1;Name=WP_004119475.1;Ontology_term=GO:0004784;gbkey=CDS;gene=sodC;go_function=superoxide dismutase activity|0004784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460403.1;locus_tag=PHA56_RS12315;product=superoxide dismutase [Cu-Zn] SodC;protein_id=WP_004119475.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2577745 2579769 . - . ID=gene-PHA56_RS12320;Name=PHA56_RS12320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS12320;old_locus_tag=PHA56_12325 NZ_CP116214.1 Protein Homology CDS 2577745 2579769 . - 0 ID=cds-WP_014229598.1;Parent=gene-PHA56_RS12320;Dbxref=Genbank:WP_014229598.1;Name=WP_014229598.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004200123.1;locus_tag=PHA56_RS12320;product=FUSC family protein;protein_id=WP_014229598.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2579769 2580665 . - . ID=gene-PHA56_RS12325;Name=PHA56_RS12325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS12325;old_locus_tag=PHA56_12330 NZ_CP116214.1 Protein Homology CDS 2579769 2580665 . - 0 ID=cds-WP_014229597.1;Parent=gene-PHA56_RS12325;Dbxref=Genbank:WP_014229597.1;Name=WP_014229597.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227263.1;locus_tag=PHA56_RS12325;product=HlyD family secretion protein;protein_id=WP_014229597.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2580676 2580912 . - . ID=gene-PHA56_RS12330;Name=PHA56_RS12330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS12330;old_locus_tag=PHA56_12335 NZ_CP116214.1 Protein Homology CDS 2580676 2580912 . - 0 ID=cds-WP_004851455.1;Parent=gene-PHA56_RS12330;Dbxref=Genbank:WP_004851455.1;Name=WP_004851455.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227262.1;locus_tag=PHA56_RS12330;product=DUF1656 domain-containing protein;protein_id=WP_004851455.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2581084 2581524 . + . ID=gene-PHA56_RS12335;Name=slyA;gbkey=Gene;gene=slyA;gene_biotype=protein_coding;locus_tag=PHA56_RS12335;old_locus_tag=PHA56_12340 NZ_CP116214.1 Protein Homology CDS 2581084 2581524 . + 0 ID=cds-WP_016810099.1;Parent=gene-PHA56_RS12335;Dbxref=Genbank:WP_016810099.1;Name=WP_016810099.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=slyA;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460407.3;locus_tag=PHA56_RS12335;product=transcriptional regulator SlyA;protein_id=WP_016810099.1;transl_table=11 NZ_CP116214.1 RefSeq pseudogene 2581566 2581835 . - . ID=gene-PHA56_RS12340;Name=PHA56_RS12340;end_range=2581835,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS12340;old_locus_tag=PHA56_12345;partial=true;pseudo=true NZ_CP116214.1 Protein Homology CDS 2581566 2581835 . - 0 ID=cds-PHA56_RS12340;Parent=gene-PHA56_RS12340;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=2581835,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227259.1;locus_tag=PHA56_RS12340;partial=true;product=GGDEF domain-containing protein;pseudo=true;transl_table=11 NZ_CP116214.1 RefSeq gene 2581866 2582986 . - . ID=gene-PHA56_RS12345;Name=PHA56_RS12345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS12345;old_locus_tag=PHA56_12350 NZ_CP116214.1 Protein Homology CDS 2582728 2582986 . - 0 ID=cds-WP_085956072.1-2;Parent=gene-PHA56_RS12345;Dbxref=Genbank:WP_085956072.1;Name=WP_085956072.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611473.1;locus_tag=PHA56_RS12345;product=IS3-like element ISKpn34 family transposase;protein_id=WP_085956072.1;transl_table=11 NZ_CP116214.1 Protein Homology CDS 2581866 2582728 . - 2 ID=cds-WP_085956072.1-2;Parent=gene-PHA56_RS12345;Dbxref=Genbank:WP_085956072.1;Name=WP_085956072.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611473.1;locus_tag=PHA56_RS12345;product=IS3-like element ISKpn34 family transposase;protein_id=WP_085956072.1;transl_table=11 NZ_CP116214.1 RefSeq pseudogene 2583058 2584143 . - . ID=gene-PHA56_RS12350;Name=PHA56_RS12350;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS12350;old_locus_tag=PHA56_12355;partial=true;pseudo=true;start_range=.,2583058 NZ_CP116214.1 Protein Homology CDS 2583058 2584143 . - 0 ID=cds-PHA56_RS12350;Parent=gene-PHA56_RS12350;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004102665.1;locus_tag=PHA56_RS12350;partial=true;product=GGDEF domain-containing protein;pseudo=true;start_range=.,2583058;transl_table=11 NZ_CP116214.1 RefSeq gene 2584371 2584838 . - . ID=gene-PHA56_RS12355;Name=slyB;gbkey=Gene;gene=slyB;gene_biotype=protein_coding;locus_tag=PHA56_RS12355;old_locus_tag=PHA56_12360 NZ_CP116214.1 Protein Homology CDS 2584371 2584838 . - 0 ID=cds-WP_004851450.1;Parent=gene-PHA56_RS12355;Dbxref=Genbank:WP_004851450.1;Name=WP_004851450.1;gbkey=CDS;gene=slyB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227258.1;locus_tag=PHA56_RS12355;product=outer membrane lipoprotein SlyB;protein_id=WP_004851450.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2585110 2586234 . + . ID=gene-PHA56_RS12360;Name=anmK;gbkey=Gene;gene=anmK;gene_biotype=protein_coding;locus_tag=PHA56_RS12360;old_locus_tag=PHA56_12365 NZ_CP116214.1 Protein Homology CDS 2585110 2586234 . + 0 ID=cds-WP_014838667.1;Parent=gene-PHA56_RS12360;Dbxref=Genbank:WP_014838667.1;Name=WP_014838667.1;gbkey=CDS;gene=anmK;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227257.1;locus_tag=PHA56_RS12360;product=anhydro-N-acetylmuramic acid kinase;protein_id=WP_014838667.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2586327 2586650 . + . ID=gene-PHA56_RS12365;Name=mliC;gbkey=Gene;gene=mliC;gene_biotype=protein_coding;locus_tag=PHA56_RS12365;old_locus_tag=PHA56_12370 NZ_CP116214.1 Protein Homology CDS 2586327 2586650 . + 0 ID=cds-WP_014229593.1;Parent=gene-PHA56_RS12365;Dbxref=Genbank:WP_014229593.1;Name=WP_014229593.1;gbkey=CDS;gene=mliC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004136809.1;locus_tag=PHA56_RS12365;product=C-type lysozyme inhibitor;protein_id=WP_014229593.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2586708 2587364 . + . ID=gene-PHA56_RS12370;Name=pdxH;gbkey=Gene;gene=pdxH;gene_biotype=protein_coding;locus_tag=PHA56_RS12370;old_locus_tag=PHA56_12375 NZ_CP116214.1 Protein Homology CDS 2586708 2587364 . + 0 ID=cds-WP_004851446.1;Parent=gene-PHA56_RS12370;Dbxref=Genbank:WP_004851446.1;Name=WP_004851446.1;Ontology_term=GO:0008615,GO:0004733,GO:0010181;gbkey=CDS;gene=pdxH;go_function=pyridoxamine-phosphate oxidase activity|0004733||IEA,FMN binding|0010181||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127173.1;locus_tag=PHA56_RS12370;product=pyridoxamine 5'-phosphate oxidase;protein_id=WP_004851446.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2587618 2588892 . + . ID=gene-PHA56_RS12375;Name=tyrS;gbkey=Gene;gene=tyrS;gene_biotype=protein_coding;locus_tag=PHA56_RS12375;old_locus_tag=PHA56_12380 NZ_CP116214.1 Protein Homology CDS 2587618 2588892 . + 0 ID=cds-WP_004851444.1;Parent=gene-PHA56_RS12375;Dbxref=Genbank:WP_004851444.1;Name=WP_004851444.1;Ontology_term=GO:0006437,GO:0004831,GO:0005737;gbkey=CDS;gene=tyrS;go_component=cytoplasm|0005737||IEA;go_function=tyrosine-tRNA ligase activity|0004831||IEA;go_process=tyrosyl-tRNA aminoacylation|0006437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460412.1;locus_tag=PHA56_RS12375;product=tyrosine--tRNA ligase;protein_id=WP_004851444.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2588954 2589814 . + . ID=gene-PHA56_RS12380;Name=pdxY;gbkey=Gene;gene=pdxY;gene_biotype=protein_coding;locus_tag=PHA56_RS12380;old_locus_tag=PHA56_12385 NZ_CP116214.1 Protein Homology CDS 2588954 2589814 . + 0 ID=cds-WP_009654806.1;Parent=gene-PHA56_RS12380;Dbxref=Genbank:WP_009654806.1;Name=WP_009654806.1;Ontology_term=GO:0009443,GO:0008478;gbkey=CDS;gene=pdxY;go_function=pyridoxal kinase activity|0008478||IEA;go_process=pyridoxal 5'-phosphate salvage|0009443||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227253.1;locus_tag=PHA56_RS12380;product=pyridoxal kinase PdxY;protein_id=WP_009654806.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2589862 2590467 . - . ID=gene-PHA56_RS12385;Name=gstA;gbkey=Gene;gene=gstA;gene_biotype=protein_coding;locus_tag=PHA56_RS12385;old_locus_tag=PHA56_12390 NZ_CP116214.1 Protein Homology CDS 2589862 2590467 . - 0 ID=cds-WP_004851441.1;Parent=gene-PHA56_RS12385;Dbxref=Genbank:WP_004851441.1;Name=WP_004851441.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=gstA;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227252.1;locus_tag=PHA56_RS12385;product=glutathione transferase GstA;protein_id=WP_004851441.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2590576 2592081 . - . ID=gene-PHA56_RS12390;Name=dtpA;gbkey=Gene;gene=dtpA;gene_biotype=protein_coding;locus_tag=PHA56_RS12390;old_locus_tag=PHA56_12395 NZ_CP116214.1 Protein Homology CDS 2590576 2592081 . - 0 ID=cds-WP_014229591.1;Parent=gene-PHA56_RS12390;Dbxref=Genbank:WP_014229591.1;Name=WP_014229591.1;Ontology_term=GO:0015833,GO:0055085,GO:1904680,GO:0016020;gbkey=CDS;gene=dtpA;go_component=membrane|0016020||IEA;go_function=peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227251.1;locus_tag=PHA56_RS12390;product=dipeptide/tripeptide permease DtpA;protein_id=WP_014229591.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2592679 2593314 . - . ID=gene-PHA56_RS12395;Name=nth;gbkey=Gene;gene=nth;gene_biotype=protein_coding;locus_tag=PHA56_RS12395;old_locus_tag=PHA56_12400 NZ_CP116214.1 Protein Homology CDS 2592679 2593314 . - 0 ID=cds-WP_004851438.1;Parent=gene-PHA56_RS12395;Dbxref=Genbank:WP_004851438.1;Name=WP_004851438.1;Ontology_term=GO:0006284,GO:0003906;gbkey=CDS;gene=nth;go_function=DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460416.1;locus_tag=PHA56_RS12395;product=endonuclease III;protein_id=WP_004851438.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2593307 2594014 . - . ID=gene-PHA56_RS12400;Name=PHA56_RS12400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS12400;old_locus_tag=PHA56_12405 NZ_CP116214.1 Protein Homology CDS 2593307 2594014 . - 0 ID=cds-WP_038424598.1;Parent=gene-PHA56_RS12400;Dbxref=Genbank:WP_038424598.1;Name=WP_038424598.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004851436.1;locus_tag=PHA56_RS12400;product=electron transport complex subunit E;protein_id=WP_038424598.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2594018 2594638 . - . ID=gene-PHA56_RS12405;Name=rsxG;gbkey=Gene;gene=rsxG;gene_biotype=protein_coding;locus_tag=PHA56_RS12405;old_locus_tag=PHA56_12410 NZ_CP116214.1 Protein Homology CDS 2594018 2594638 . - 0 ID=cds-WP_004851434.1;Parent=gene-PHA56_RS12405;Dbxref=Genbank:WP_004851434.1;Name=WP_004851434.1;Ontology_term=GO:0022900,GO:0009055,GO:0010181,GO:0016020;gbkey=CDS;gene=rsxG;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002907731.1;locus_tag=PHA56_RS12405;product=electron transport complex subunit RsxG;protein_id=WP_004851434.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2594649 2595701 . - . ID=gene-PHA56_RS12410;Name=rsxD;gbkey=Gene;gene=rsxD;gene_biotype=protein_coding;locus_tag=PHA56_RS12410;old_locus_tag=PHA56_12415 NZ_CP116214.1 Protein Homology CDS 2594649 2595701 . - 0 ID=cds-WP_014229590.1;Parent=gene-PHA56_RS12410;Dbxref=Genbank:WP_014229590.1;Name=WP_014229590.1;Ontology_term=GO:0022900,GO:0055085,GO:0016020;gbkey=CDS;gene=rsxD;go_component=membrane|0016020||IEA;go_process=electron transport chain|0022900||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227246.1;locus_tag=PHA56_RS12410;product=electron transport complex subunit RsxD;protein_id=WP_014229590.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2595702 2597888 . - . ID=gene-PHA56_RS12415;Name=rsxC;gbkey=Gene;gene=rsxC;gene_biotype=protein_coding;locus_tag=PHA56_RS12415;old_locus_tag=PHA56_12420 NZ_CP116214.1 Protein Homology CDS 2595702 2597888 . - 0 ID=cds-WP_076752291.1;Parent=gene-PHA56_RS12415;Dbxref=Genbank:WP_076752291.1;Name=WP_076752291.1;Ontology_term=GO:0009055,GO:0051539,GO:0016020;gbkey=CDS;gene=rsxC;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004154178.1;locus_tag=PHA56_RS12415;product=electron transport complex subunit RsxC;protein_id=WP_076752291.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2597881 2598459 . - . ID=gene-PHA56_RS12420;Name=rsxB;gbkey=Gene;gene=rsxB;gene_biotype=protein_coding;locus_tag=PHA56_RS12420;old_locus_tag=PHA56_12425 NZ_CP116214.1 Protein Homology CDS 2597881 2598459 . - 0 ID=cds-WP_014229588.1;Parent=gene-PHA56_RS12420;Dbxref=Genbank:WP_014229588.1;Name=WP_014229588.1;Ontology_term=GO:0022900,GO:0009055,GO:0051536;gbkey=CDS;gene=rsxB;go_function=electron transfer activity|0009055||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020078990.1;locus_tag=PHA56_RS12420;product=electron transport complex subunit RsxB;protein_id=WP_014229588.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2598459 2599040 . - . ID=gene-PHA56_RS12425;Name=rsxA;gbkey=Gene;gene=rsxA;gene_biotype=protein_coding;locus_tag=PHA56_RS12425;old_locus_tag=PHA56_12430 NZ_CP116214.1 Protein Homology CDS 2598459 2599040 . - 0 ID=cds-WP_004102633.1;Parent=gene-PHA56_RS12425;Dbxref=Genbank:WP_004102633.1;Name=WP_004102633.1;Ontology_term=GO:0022900,GO:0016020;gbkey=CDS;gene=rsxA;go_component=membrane|0016020||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017456621.1;locus_tag=PHA56_RS12425;product=electron transport complex subunit RsxA;protein_id=WP_004102633.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2599118 2599558 . - . ID=gene-PHA56_RS12430;Name=PHA56_RS12430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS12430;old_locus_tag=PHA56_12435 NZ_CP116214.1 Protein Homology CDS 2599118 2599558 . - 0 ID=cds-WP_014229587.1;Parent=gene-PHA56_RS12430;Dbxref=Genbank:WP_014229587.1;Name=WP_014229587.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227241.1;locus_tag=PHA56_RS12430;product=DUF2569 domain-containing protein;protein_id=WP_014229587.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2599638 2599853 . - . ID=gene-PHA56_RS12435;Name=ydgT;gbkey=Gene;gene=ydgT;gene_biotype=protein_coding;locus_tag=PHA56_RS12435;old_locus_tag=PHA56_12440 NZ_CP116214.1 Protein Homology CDS 2599638 2599853 . - 0 ID=cds-WP_004134363.1;Parent=gene-PHA56_RS12435;Dbxref=Genbank:WP_004134363.1;Name=WP_004134363.1;gbkey=CDS;gene=ydgT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460424.3;locus_tag=PHA56_RS12435;product=transcription modulator YdgT;protein_id=WP_004134363.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2600073 2601443 . - . ID=gene-PHA56_RS12440;Name=PHA56_RS12440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS12440;old_locus_tag=PHA56_12445 NZ_CP116214.1 Protein Homology CDS 2600073 2601443 . - 0 ID=cds-WP_014229586.1;Parent=gene-PHA56_RS12440;Dbxref=Genbank:WP_014229586.1;Name=WP_014229586.1;Ontology_term=GO:0030245,GO:0008422;gbkey=CDS;go_function=beta-glucosidase activity|0008422||IEA;go_process=cellulose catabolic process|0030245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227239.1;locus_tag=PHA56_RS12440;product=GH1 family beta-glucosidase;protein_id=WP_014229586.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2601547 2601696 . - . ID=gene-PHA56_RS12445;Name=blr;gbkey=Gene;gene=blr;gene_biotype=protein_coding;locus_tag=PHA56_RS12445;old_locus_tag=PHA56_12450 NZ_CP116214.1 Protein Homology CDS 2601547 2601696 . - 0 ID=cds-WP_014229585.1;Parent=gene-PHA56_RS12445;Dbxref=Genbank:WP_014229585.1;Name=WP_014229585.1;gbkey=CDS;gene=blr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004119556.1;locus_tag=PHA56_RS12445;product=division septum protein Blr;protein_id=WP_014229585.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2601885 2602925 . + . ID=gene-PHA56_RS12450;Name=PHA56_RS12450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS12450;old_locus_tag=PHA56_12455 NZ_CP116214.1 Protein Homology CDS 2601885 2602925 . + 0 ID=cds-WP_014838658.1;Parent=gene-PHA56_RS12450;Dbxref=Genbank:WP_014838658.1;Name=WP_014838658.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004102623.1;locus_tag=PHA56_RS12450;product=oxidoreductase;protein_id=WP_014838658.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2602996 2603997 . - . ID=gene-PHA56_RS12455;Name=add;gbkey=Gene;gene=add;gene_biotype=protein_coding;locus_tag=PHA56_RS12455;old_locus_tag=PHA56_12460 NZ_CP116214.1 Protein Homology CDS 2602996 2603997 . - 0 ID=cds-WP_025105823.1;Parent=gene-PHA56_RS12455;Dbxref=Genbank:WP_025105823.1;Name=WP_025105823.1;Ontology_term=GO:0009168,GO:0004000;gbkey=CDS;gene=add;go_function=adenosine deaminase activity|0004000||IEA;go_process=purine ribonucleoside monophosphate biosynthetic process|0009168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004119571.1;locus_tag=PHA56_RS12455;product=adenosine deaminase;protein_id=WP_025105823.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2604270 2605085 . + . ID=gene-PHA56_RS12460;Name=metQ;gbkey=Gene;gene=metQ;gene_biotype=protein_coding;locus_tag=PHA56_RS12460;old_locus_tag=PHA56_12465 NZ_CP116214.1 Protein Homology CDS 2604270 2605085 . + 0 ID=cds-WP_004851417.1;Parent=gene-PHA56_RS12460;Dbxref=Genbank:WP_004851417.1;Name=WP_004851417.1;gbkey=CDS;gene=metQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019454748.1;locus_tag=PHA56_RS12460;product=methionine ABC transporter substrate-binding lipoprotein MetQ;protein_id=WP_004851417.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2605172 2605405 . - . ID=gene-PHA56_RS12465;Name=yedF;gbkey=Gene;gene=yedF;gene_biotype=protein_coding;locus_tag=PHA56_RS12465;old_locus_tag=PHA56_12470 NZ_CP116214.1 Protein Homology CDS 2605172 2605405 . - 0 ID=cds-WP_271292972.1;Parent=gene-PHA56_RS12465;Dbxref=Genbank:WP_271292972.1;Name=WP_271292972.1;gbkey=CDS;gene=yedF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310696.1;locus_tag=PHA56_RS12465;product=sulfurtransferase-like selenium metabolism protein YedF;protein_id=WP_271292972.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2605402 2606613 . - . ID=gene-PHA56_RS12470;Name=yedE;gbkey=Gene;gene=yedE;gene_biotype=protein_coding;locus_tag=PHA56_RS12470;old_locus_tag=PHA56_12475 NZ_CP116214.1 Protein Homology CDS 2605402 2606613 . - 0 ID=cds-WP_014838656.1;Parent=gene-PHA56_RS12470;Dbxref=Genbank:WP_014838656.1;Name=WP_014838656.1;gbkey=CDS;gene=yedE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416439.1;locus_tag=PHA56_RS12470;product=selenium metabolism membrane protein YedE/FdhT;protein_id=WP_014838656.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2606803 2607006 . - . ID=gene-PHA56_RS12475;Name=ydfZ;gbkey=Gene;gene=ydfZ;gene_biotype=protein_coding;locus_tag=PHA56_RS12475;old_locus_tag=PHA56_12480 NZ_CP116214.1 Protein Homology CDS 2606803 2607006 . - 0 ID=cds-WP_004851411.1;Parent=gene-PHA56_RS12475;Dbxref=Genbank:WP_004851411.1;Name=WP_004851411.1;gbkey=CDS;gene=ydfZ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226713.1;locus_tag=PHA56_RS12475;product=putative selenium delivery protein YdfZ;protein_id=WP_004851411.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2607190 2608362 . - . ID=gene-PHA56_RS12480;Name=PHA56_RS12480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS12480;old_locus_tag=PHA56_12485 NZ_CP116214.1 Protein Homology CDS 2607190 2608362 . - 0 ID=cds-WP_119834669.1;Parent=gene-PHA56_RS12480;Dbxref=Genbank:WP_119834669.1;Name=WP_119834669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004102615.1;locus_tag=PHA56_RS12480;product=pyridoxal phosphate-dependent aminotransferase;protein_id=WP_119834669.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2608410 2610002 . - . ID=gene-PHA56_RS12485;Name=malX;gbkey=Gene;gene=malX;gene_biotype=protein_coding;locus_tag=PHA56_RS12485;old_locus_tag=PHA56_12490 NZ_CP116214.1 Protein Homology CDS 2608410 2610002 . - 0 ID=cds-WP_038424596.1;Parent=gene-PHA56_RS12485;Dbxref=Genbank:WP_038424596.1;Name=WP_038424596.1;Ontology_term=GO:0005355,GO:0005363;gbkey=CDS;gene=malX;go_function=glucose transmembrane transporter activity|0005355||IEA,maltose transmembrane transporter activity|0005363||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226716.1;locus_tag=PHA56_RS12485;product=maltose/glucose-specific PTS transporter subunit IIBC;protein_id=WP_038424596.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2610177 2611205 . + . ID=gene-PHA56_RS12490;Name=PHA56_RS12490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS12490;old_locus_tag=PHA56_12495 NZ_CP116214.1 Protein Homology CDS 2610177 2611205 . + 0 ID=cds-WP_004851407.1;Parent=gene-PHA56_RS12490;Dbxref=Genbank:WP_004851407.1;Name=WP_004851407.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226717.1;locus_tag=PHA56_RS12490;product=Mal regulon transcriptional regulator MalI;protein_id=WP_004851407.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2611231 2612793 . - . ID=gene-PHA56_RS12495;Name=PHA56_RS12495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS12495;old_locus_tag=PHA56_12500 NZ_CP116214.1 Protein Homology CDS 2611231 2612793 . - 0 ID=cds-WP_014838654.1;Parent=gene-PHA56_RS12495;Dbxref=Genbank:WP_014838654.1;Name=WP_014838654.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004119592.1;locus_tag=PHA56_RS12495;product=YdgA family protein;protein_id=WP_014838654.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2612892 2614070 . - . ID=gene-PHA56_RS12500;Name=manA;gbkey=Gene;gene=manA;gene_biotype=protein_coding;locus_tag=PHA56_RS12500;old_locus_tag=PHA56_12505 NZ_CP116214.1 Protein Homology CDS 2612892 2614070 . - 0 ID=cds-WP_014838653.1;Parent=gene-PHA56_RS12500;Dbxref=Genbank:WP_014838653.1;Name=WP_014838653.1;Ontology_term=GO:0009298,GO:0004476,GO:0008270;gbkey=CDS;gene=manA;go_function=mannose-6-phosphate isomerase activity|0004476||IEA,zinc ion binding|0008270||IEA;go_process=GDP-mannose biosynthetic process|0009298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226719.1;locus_tag=PHA56_RS12500;product=mannose-6-phosphate isomerase;protein_id=WP_014838653.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2614268 2615914 . + . ID=gene-PHA56_RS12505;Name=fumA;gbkey=Gene;gene=fumA;gene_biotype=protein_coding;locus_tag=PHA56_RS12505;old_locus_tag=PHA56_12510 NZ_CP116214.1 Protein Homology CDS 2614268 2615914 . + 0 ID=cds-WP_014838652.1;Parent=gene-PHA56_RS12505;Dbxref=Genbank:WP_014838652.1;Name=WP_014838652.1;gbkey=CDS;gene=fumA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226720.1;locus_tag=PHA56_RS12505;product=class I fumarate hydratase FumA;protein_id=WP_014838652.1;transl_table=11 NZ_CP116214.1 RefSeq pseudogene 2616057 2617456 . + . ID=gene-PHA56_RS12510;Name=fumC;gbkey=Gene;gene=fumC;gene_biotype=pseudogene;locus_tag=PHA56_RS12510;old_locus_tag=PHA56_12515;pseudo=true NZ_CP116214.1 Protein Homology CDS 2616057 2617456 . + 0 ID=cds-PHA56_RS12510;Parent=gene-PHA56_RS12510;Note=frameshifted;Ontology_term=GO:0006099,GO:0004333;gbkey=CDS;gene=fumC;go_function=fumarate hydratase activity|0004333||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226721.1;locus_tag=PHA56_RS12510;product=class II fumarate hydratase;pseudo=true;transl_table=11 NZ_CP116214.1 RefSeq gene 2617446 2618378 . - . ID=gene-PHA56_RS12515;Name=tus;gbkey=Gene;gene=tus;gene_biotype=protein_coding;locus_tag=PHA56_RS12515;old_locus_tag=PHA56_12520 NZ_CP116214.1 Protein Homology CDS 2617446 2618378 . - 0 ID=cds-WP_014229577.1;Parent=gene-PHA56_RS12515;Dbxref=Genbank:WP_014229577.1;Name=WP_014229577.1;Ontology_term=GO:0006274,GO:0003677;gbkey=CDS;gene=tus;go_function=DNA binding|0003677||IEA;go_process=DNA replication termination|0006274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226722.1;locus_tag=PHA56_RS12515;product=DNA replication terminus site-binding protein;protein_id=WP_014229577.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2618454 2619755 . - . ID=gene-PHA56_RS12520;Name=rstB;gbkey=Gene;gene=rstB;gene_biotype=protein_coding;locus_tag=PHA56_RS12520;old_locus_tag=PHA56_12525 NZ_CP116214.1 Protein Homology CDS 2618454 2619755 . - 0 ID=cds-WP_014229576.1;Parent=gene-PHA56_RS12520;Dbxref=Genbank:WP_014229576.1;Name=WP_014229576.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=rstB;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226723.1;locus_tag=PHA56_RS12520;product=two-component system sensor histidine kinase RstB;protein_id=WP_014229576.1;transl_table=11 NZ_CP116214.1 RefSeq pseudogene 2619865 2619942 . - . ID=gene-PHA56_RS12525;Name=PHA56_RS12525;end_range=2619942,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS12525;old_locus_tag=PHA56_12530;partial=true;pseudo=true;start_range=.,2619865 NZ_CP116214.1 Protein Homology CDS 2619865 2619942 . - 0 ID=cds-PHA56_RS12525;Parent=gene-PHA56_RS12525;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=2619942,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309956.1;locus_tag=PHA56_RS12525;partial=true;product=hypothetical protein;pseudo=true;start_range=.,2619865;transl_table=11 NZ_CP116214.1 RefSeq gene 2620074 2620763 . + . ID=gene-PHA56_RS12530;Name=PHA56_RS12530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS12530;old_locus_tag=PHA56_12535 NZ_CP116214.1 Protein Homology CDS 2620074 2620763 . + 0 ID=cds-WP_009654787.1;Parent=gene-PHA56_RS12530;Dbxref=Genbank:WP_009654787.1;Name=WP_009654787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009654787.1;locus_tag=PHA56_RS12530;product=VIT family protein;protein_id=WP_009654787.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2620941 2621423 . - . ID=gene-PHA56_RS12535;Name=PHA56_RS12535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS12535;old_locus_tag=PHA56_12540 NZ_CP116214.1 Protein Homology CDS 2620941 2621423 . - 0 ID=cds-WP_038424595.1;Parent=gene-PHA56_RS12535;Dbxref=Genbank:WP_038424595.1;Name=WP_038424595.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009654741.1;locus_tag=PHA56_RS12535;product=glutathione peroxidase;protein_id=WP_038424595.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2621512 2623284 . - . ID=gene-PHA56_RS12540;Name=PHA56_RS12540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS12540;old_locus_tag=PHA56_12545 NZ_CP116214.1 Protein Homology CDS 2621512 2623284 . - 0 ID=cds-WP_038424594.1;Parent=gene-PHA56_RS12540;Dbxref=Genbank:WP_038424594.1;Name=WP_038424594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229573.1;locus_tag=PHA56_RS12540;product=EAL domain-containing protein;protein_id=WP_038424594.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2623596 2624312 . - . ID=gene-PHA56_RS12545;Name=rstA;gbkey=Gene;gene=rstA;gene_biotype=protein_coding;locus_tag=PHA56_RS12545;old_locus_tag=PHA56_12550 NZ_CP116214.1 Protein Homology CDS 2623596 2624312 . - 0 ID=cds-WP_004851385.1;Parent=gene-PHA56_RS12545;Dbxref=Genbank:WP_004851385.1;Name=WP_004851385.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=rstA;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226725.1;locus_tag=PHA56_RS12545;product=two-component system response regulator RstA;protein_id=WP_004851385.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2624661 2625008 . - . ID=gene-PHA56_RS12550;Name=iraM;gbkey=Gene;gene=iraM;gene_biotype=protein_coding;locus_tag=PHA56_RS12550;old_locus_tag=PHA56_12555 NZ_CP116214.1 Protein Homology CDS 2624661 2625008 . - 0 ID=cds-WP_014229571.1;Parent=gene-PHA56_RS12550;Dbxref=Genbank:WP_014229571.1;Name=WP_014229571.1;gbkey=CDS;gene=iraM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004102595.1;locus_tag=PHA56_RS12550;product=anti-adapter protein IraM;protein_id=WP_014229571.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2626037 2626372 . + . ID=gene-PHA56_RS12555;Name=PHA56_RS12555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS12555;old_locus_tag=PHA56_12560 NZ_CP116214.1 Protein Homology CDS 2626037 2626372 . + 0 ID=cds-WP_014229570.1;Parent=gene-PHA56_RS12555;Dbxref=Genbank:WP_014229570.1;Name=WP_014229570.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226726.1;locus_tag=PHA56_RS12555;product=GlpM family protein;protein_id=WP_014229570.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2626369 2627094 . - . ID=gene-PHA56_RS12560;Name=folM;gbkey=Gene;gene=folM;gene_biotype=protein_coding;locus_tag=PHA56_RS12560;old_locus_tag=PHA56_12565 NZ_CP116214.1 Protein Homology CDS 2626369 2627094 . - 0 ID=cds-WP_014838648.1;Parent=gene-PHA56_RS12560;Dbxref=Genbank:WP_014838648.1;Name=WP_014838648.1;Ontology_term=GO:0016491;gbkey=CDS;gene=folM;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226727.1;locus_tag=PHA56_RS12560;product=dihydromonapterin reductase;protein_id=WP_014838648.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2627131 2628513 . - . ID=gene-PHA56_RS12565;Name=PHA56_RS12565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS12565;old_locus_tag=PHA56_12570 NZ_CP116214.1 Protein Homology CDS 2627131 2628513 . - 0 ID=cds-WP_014229568.1;Parent=gene-PHA56_RS12565;Dbxref=Genbank:WP_014229568.1;Name=WP_014229568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416122.1;locus_tag=PHA56_RS12565;product=amino acid permease;protein_id=WP_014229568.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2628693 2629643 . - . ID=gene-PHA56_RS12570;Name=ydgH;gbkey=Gene;gene=ydgH;gene_biotype=protein_coding;locus_tag=PHA56_RS12570;old_locus_tag=PHA56_12575 NZ_CP116214.1 Protein Homology CDS 2628693 2629643 . - 0 ID=cds-WP_014229567.1;Parent=gene-PHA56_RS12570;Dbxref=Genbank:WP_014229567.1;Name=WP_014229567.1;gbkey=CDS;gene=ydgH;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226729.1;locus_tag=PHA56_RS12570;product=DUF1471 family protein YdgH;protein_id=WP_014229567.1;transl_table=11 NZ_CP116214.1 RefSeq pseudogene 2629640 2629822 . - . ID=gene-PHA56_RS12575;Name=PHA56_RS12575;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS12575;old_locus_tag=PHA56_12580;pseudo=true NZ_CP116214.1 Protein Homology CDS 2629640 2629822 . - 0 ID=cds-PHA56_RS12575;Parent=gene-PHA56_RS12575;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226730.1;locus_tag=PHA56_RS12575;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP116214.1 RefSeq gene 2630166 2631695 . + . ID=gene-PHA56_RS12580;Name=pntA;gbkey=Gene;gene=pntA;gene_biotype=protein_coding;locus_tag=PHA56_RS12580;old_locus_tag=PHA56_12585 NZ_CP116214.1 Protein Homology CDS 2630166 2631695 . + 0 ID=cds-WP_014229566.1;Parent=gene-PHA56_RS12580;Dbxref=Genbank:WP_014229566.1;Name=WP_014229566.1;Ontology_term=GO:0008750;gbkey=CDS;gene=pntA;go_function=NAD(P)+ transhydrogenase (AB-specific) activity|0008750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226733.1;locus_tag=PHA56_RS12580;product=Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha;protein_id=WP_014229566.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2631706 2633094 . + . ID=gene-PHA56_RS12585;Name=pntB;gbkey=Gene;gene=pntB;gene_biotype=protein_coding;locus_tag=PHA56_RS12585;old_locus_tag=PHA56_12590 NZ_CP116214.1 Protein Homology CDS 2631706 2633094 . + 0 ID=cds-WP_004851370.1;Parent=gene-PHA56_RS12585;Dbxref=Genbank:WP_004851370.1;Name=WP_004851370.1;Ontology_term=GO:0008750,GO:0050661,GO:0016020;gbkey=CDS;gene=pntB;go_component=membrane|0016020||IEA;go_function=NAD(P)+ transhydrogenase (AB-specific) activity|0008750||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000014033.1;locus_tag=PHA56_RS12585;product=Re/Si-specific NAD(P)(+) transhydrogenase subunit beta;protein_id=WP_004851370.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2633239 2633427 . + . ID=gene-PHA56_RS12590;Name=PHA56_RS12590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS12590;old_locus_tag=PHA56_12595 NZ_CP116214.1 Protein Homology CDS 2633239 2633427 . + 0 ID=cds-WP_004102581.1;Parent=gene-PHA56_RS12590;Dbxref=Genbank:WP_004102581.1;Name=WP_004102581.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226735.1;locus_tag=PHA56_RS12590;product=YdiH family protein;protein_id=WP_004102581.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2633556 2634506 . - . ID=gene-PHA56_RS12595;Name=uspE;gbkey=Gene;gene=uspE;gene_biotype=protein_coding;locus_tag=PHA56_RS12595;old_locus_tag=PHA56_12600 NZ_CP116214.1 Protein Homology CDS 2633556 2634506 . - 0 ID=cds-WP_004851366.1;Parent=gene-PHA56_RS12595;Dbxref=Genbank:WP_004851366.1;Name=WP_004851366.1;gbkey=CDS;gene=uspE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226736.1;locus_tag=PHA56_RS12595;product=universal stress protein UspE;protein_id=WP_004851366.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2634644 2635396 . - . ID=gene-PHA56_RS12600;Name=fnr;gbkey=Gene;gene=fnr;gene_biotype=protein_coding;locus_tag=PHA56_RS12600;old_locus_tag=PHA56_12605 NZ_CP116214.1 Protein Homology CDS 2634644 2635396 . - 0 ID=cds-WP_004851364.1;Parent=gene-PHA56_RS12600;Dbxref=Genbank:WP_004851364.1;Name=WP_004851364.1;gbkey=CDS;gene=fnr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007849744.1;locus_tag=PHA56_RS12600;product=fumarate/nitrate reduction transcriptional regulator Fnr;protein_id=WP_004851364.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2635591 2636106 . - . ID=gene-PHA56_RS12605;Name=ogt;gbkey=Gene;gene=ogt;gene_biotype=protein_coding;locus_tag=PHA56_RS12605;old_locus_tag=PHA56_12610 NZ_CP116214.1 Protein Homology CDS 2635591 2636106 . - 0 ID=cds-WP_038424593.1;Parent=gene-PHA56_RS12605;Dbxref=Genbank:WP_038424593.1;Name=WP_038424593.1;Ontology_term=GO:0006281,GO:0003908;gbkey=CDS;gene=ogt;go_function=methylated-DNA-[protein]-cysteine S-methyltransferase activity|0003908||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226738.1;locus_tag=PHA56_RS12605;product=methylated-DNA--[protein]-cysteine S-methyltransferase;protein_id=WP_038424593.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2636561 2638087 . - . ID=gene-PHA56_RS12610;Name=abgT;gbkey=Gene;gene=abgT;gene_biotype=protein_coding;locus_tag=PHA56_RS12610;old_locus_tag=PHA56_12615 NZ_CP116214.1 Protein Homology CDS 2636561 2638087 . - 0 ID=cds-WP_014229563.1;Parent=gene-PHA56_RS12610;Dbxref=Genbank:WP_014229563.1;Name=WP_014229563.1;gbkey=CDS;gene=abgT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012541885.1;locus_tag=PHA56_RS12610;product=p-aminobenzoyl-glutamate transporter;protein_id=WP_014229563.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2638200 2639645 . - . ID=gene-PHA56_RS12615;Name=PHA56_RS12615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS12615;old_locus_tag=PHA56_12620 NZ_CP116214.1 Protein Homology CDS 2638200 2639645 . - 0 ID=cds-WP_076752289.1;Parent=gene-PHA56_RS12615;Dbxref=Genbank:WP_076752289.1;Name=WP_076752289.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226741.1;locus_tag=PHA56_RS12615;product=M20 family metallopeptidase;protein_id=WP_076752289.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2639645 2640955 . - . ID=gene-PHA56_RS12620;Name=PHA56_RS12620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS12620;old_locus_tag=PHA56_12625 NZ_CP116214.1 Protein Homology CDS 2639645 2640955 . - 0 ID=cds-WP_038424590.1;Parent=gene-PHA56_RS12620;Dbxref=Genbank:WP_038424590.1;Name=WP_038424590.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226742.1;locus_tag=PHA56_RS12620;product=M20 family metallo-hydrolase;protein_id=WP_038424590.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2641122 2642030 . + . ID=gene-PHA56_RS12625;Name=PHA56_RS12625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS12625;old_locus_tag=PHA56_12630 NZ_CP116214.1 Protein Homology CDS 2641122 2642030 . + 0 ID=cds-WP_014229560.1;Parent=gene-PHA56_RS12625;Dbxref=Genbank:WP_014229560.1;Name=WP_014229560.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226743.1;locus_tag=PHA56_RS12625;product=LysR family transcriptional regulator;protein_id=WP_014229560.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2642113 2642676 . + . ID=gene-PHA56_RS12630;Name=smrA;gbkey=Gene;gene=smrA;gene_biotype=protein_coding;locus_tag=PHA56_RS12630;old_locus_tag=PHA56_12635 NZ_CP116214.1 Protein Homology CDS 2642113 2642676 . + 0 ID=cds-WP_014229559.1;Parent=gene-PHA56_RS12630;Dbxref=Genbank:WP_014229559.1;Name=WP_014229559.1;gbkey=CDS;gene=smrA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226744.1;locus_tag=PHA56_RS12630;product=DNA endonuclease SmrA;protein_id=WP_014229559.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2642673 2643479 . - . ID=gene-PHA56_RS12635;Name=PHA56_RS12635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS12635;old_locus_tag=PHA56_12640 NZ_CP116214.1 Protein Homology CDS 2642673 2643479 . - 0 ID=cds-WP_004851343.1;Parent=gene-PHA56_RS12635;Dbxref=Genbank:WP_004851343.1;Name=WP_004851343.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226745.1;locus_tag=PHA56_RS12635;product=IclR family transcriptional regulator C-terminal domain-containing protein;protein_id=WP_004851343.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2643647 2644333 . + . ID=gene-PHA56_RS12640;Name=PHA56_RS12640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS12640;old_locus_tag=PHA56_12645 NZ_CP116214.1 Protein Homology CDS 2643647 2644333 . + 0 ID=cds-WP_014229558.1;Parent=gene-PHA56_RS12640;Dbxref=Genbank:WP_014229558.1;Name=WP_014229558.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226746.1;locus_tag=PHA56_RS12640;product=3-oxoacid CoA-transferase subunit A;protein_id=WP_014229558.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2644344 2645000 . + . ID=gene-PHA56_RS12645;Name=PHA56_RS12645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS12645;old_locus_tag=PHA56_12650 NZ_CP116214.1 Protein Homology CDS 2644344 2645000 . + 0 ID=cds-WP_014229557.1;Parent=gene-PHA56_RS12645;Dbxref=Genbank:WP_014229557.1;Name=WP_014229557.1;Ontology_term=GO:0008410;gbkey=CDS;go_function=CoA-transferase activity|0008410||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226747.1;locus_tag=PHA56_RS12645;product=3-oxoacid CoA-transferase subunit B;protein_id=WP_014229557.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2645011 2646213 . + . ID=gene-PHA56_RS12650;Name=pcaF;gbkey=Gene;gene=pcaF;gene_biotype=protein_coding;locus_tag=PHA56_RS12650;old_locus_tag=PHA56_12655 NZ_CP116214.1 Protein Homology CDS 2645011 2646213 . + 0 ID=cds-WP_014229556.1;Parent=gene-PHA56_RS12650;Dbxref=Genbank:WP_014229556.1;Name=WP_014229556.1;Ontology_term=GO:0019619,GO:0016747;gbkey=CDS;gene=pcaF;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;go_process=3%2C4-dihydroxybenzoate catabolic process|0019619||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226748.1;locus_tag=PHA56_RS12650;product=3-oxoadipyl-CoA thiolase;protein_id=WP_014229556.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2646223 2647575 . + . ID=gene-PHA56_RS12655;Name=PHA56_RS12655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS12655;old_locus_tag=PHA56_12660 NZ_CP116214.1 Protein Homology CDS 2646223 2647575 . + 0 ID=cds-WP_014229555.1;Parent=gene-PHA56_RS12655;Dbxref=Genbank:WP_014229555.1;Name=WP_014229555.1;Ontology_term=GO:0019619,GO:0047472;gbkey=CDS;go_function=3-carboxy-cis%2Ccis-muconate cycloisomerase activity|0047472||IEA;go_process=3%2C4-dihydroxybenzoate catabolic process|0019619||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004102550.1;locus_tag=PHA56_RS12655;product=3-carboxy-cis%2Ccis-muconate cycloisomerase;protein_id=WP_014229555.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2647565 2648332 . + . ID=gene-PHA56_RS12660;Name=pcaD;gbkey=Gene;gene=pcaD;gene_biotype=protein_coding;locus_tag=PHA56_RS12660;old_locus_tag=PHA56_12665 NZ_CP116214.1 Protein Homology CDS 2647565 2648332 . + 0 ID=cds-WP_076752287.1;Parent=gene-PHA56_RS12660;Dbxref=Genbank:WP_076752287.1;Name=WP_076752287.1;Ontology_term=GO:0042952,GO:0047570;gbkey=CDS;gene=pcaD;go_function=3-oxoadipate enol-lactonase activity|0047570||IEA;go_process=beta-ketoadipate pathway|0042952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229554.1;locus_tag=PHA56_RS12660;product=3-oxoadipate enol-lactonase;protein_id=WP_076752287.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2648322 2648705 . + . ID=gene-PHA56_RS12665;Name=pcaC;gbkey=Gene;gene=pcaC;gene_biotype=protein_coding;locus_tag=PHA56_RS12665;old_locus_tag=PHA56_12670 NZ_CP116214.1 Protein Homology CDS 2648322 2648705 . + 0 ID=cds-WP_076752286.1;Parent=gene-PHA56_RS12665;Dbxref=Genbank:WP_076752286.1;Name=WP_076752286.1;Ontology_term=GO:0047575;gbkey=CDS;gene=pcaC;go_function=4-carboxymuconolactone decarboxylase activity|0047575||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004119652.1;locus_tag=PHA56_RS12665;product=4-carboxymuconolactone decarboxylase;protein_id=WP_076752286.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2648789 2650444 . - . ID=gene-PHA56_RS12670;Name=fumA;gbkey=Gene;gene=fumA;gene_biotype=protein_coding;locus_tag=PHA56_RS12670;old_locus_tag=PHA56_12675 NZ_CP116214.1 Protein Homology CDS 2648789 2650444 . - 0 ID=cds-WP_076752285.1;Parent=gene-PHA56_RS12670;Dbxref=Genbank:WP_076752285.1;Name=WP_076752285.1;gbkey=CDS;gene=fumA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009654749.1;locus_tag=PHA56_RS12670;product=class I fumarate hydratase FumA;protein_id=WP_076752285.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2650497 2652002 . - . ID=gene-PHA56_RS12675;Name=PHA56_RS12675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS12675;old_locus_tag=PHA56_12680 NZ_CP116214.1 Protein Homology CDS 2650497 2652002 . - 0 ID=cds-WP_004851326.1;Parent=gene-PHA56_RS12675;Dbxref=Genbank:WP_004851326.1;Name=WP_004851326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012968326.1;locus_tag=PHA56_RS12675;product=anion permease;protein_id=WP_004851326.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2652630 2655407 . + . ID=gene-PHA56_RS12680;Name=PHA56_RS12680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS12680;old_locus_tag=PHA56_12685 NZ_CP116214.1 Protein Homology CDS 2652630 2655407 . + 0 ID=cds-WP_076752284.1;Parent=gene-PHA56_RS12680;Dbxref=Genbank:WP_076752284.1;Name=WP_076752284.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016946652.1;locus_tag=PHA56_RS12680;product=flavocytochrome c;protein_id=WP_076752284.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2655475 2656425 . + . ID=gene-PHA56_RS12685;Name=PHA56_RS12685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS12685;old_locus_tag=PHA56_12690 NZ_CP116214.1 Protein Homology CDS 2655475 2656425 . + 0 ID=cds-WP_014229550.1;Parent=gene-PHA56_RS12685;Dbxref=Genbank:WP_014229550.1;Name=WP_014229550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226758.1;locus_tag=PHA56_RS12685;product=FAD:protein FMN transferase;protein_id=WP_014229550.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2656406 2657125 . - . ID=gene-PHA56_RS12690;Name=dcuR;gbkey=Gene;gene=dcuR;gene_biotype=protein_coding;locus_tag=PHA56_RS12690;old_locus_tag=PHA56_12695 NZ_CP116214.1 Protein Homology CDS 2656406 2657125 . - 0 ID=cds-WP_004851320.1;Parent=gene-PHA56_RS12690;Dbxref=Genbank:WP_004851320.1;Name=WP_004851320.1;Ontology_term=GO:0000160,GO:0003700;gbkey=CDS;gene=dcuR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226759.1;locus_tag=PHA56_RS12690;product=two-component system response regulator DcuR;protein_id=WP_004851320.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2657122 2658735 . - . ID=gene-PHA56_RS12695;Name=PHA56_RS12695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS12695;old_locus_tag=PHA56_12700 NZ_CP116214.1 Protein Homology CDS 2657122 2658735 . - 0 ID=cds-WP_004851318.1;Parent=gene-PHA56_RS12695;Dbxref=Genbank:WP_004851318.1;Name=WP_004851318.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004102535.1;locus_tag=PHA56_RS12695;product=sensor histidine kinase;protein_id=WP_004851318.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2658816 2659739 . - . ID=gene-PHA56_RS12700;Name=PHA56_RS12700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS12700;old_locus_tag=PHA56_12705 NZ_CP116214.1 Protein Homology CDS 2658816 2659739 . - 0 ID=cds-WP_032694459.1;Parent=gene-PHA56_RS12700;Dbxref=Genbank:WP_032694459.1;Name=WP_032694459.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229549.1;locus_tag=PHA56_RS12700;product=LysR family transcriptional regulator;protein_id=WP_032694459.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2659847 2660587 . + . ID=gene-PHA56_RS12705;Name=PHA56_RS12705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS12705;old_locus_tag=PHA56_12710 NZ_CP116214.1 Protein Homology CDS 2659847 2660587 . + 0 ID=cds-WP_076752283.1;Parent=gene-PHA56_RS12705;Dbxref=Genbank:WP_076752283.1;Name=WP_076752283.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014838637.1;locus_tag=PHA56_RS12705;product=SDR family oxidoreductase;protein_id=WP_076752283.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2660819 2661724 . + . ID=gene-PHA56_RS12710;Name=PHA56_RS12710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS12710;old_locus_tag=PHA56_12715 NZ_CP116214.1 Protein Homology CDS 2660819 2661724 . + 0 ID=cds-WP_014838636.1;Parent=gene-PHA56_RS12710;Dbxref=Genbank:WP_014838636.1;Name=WP_014838636.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004135589.1;locus_tag=PHA56_RS12710;product=N-acetylmuramic acid 6-phosphate etherase;protein_id=WP_014838636.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2662070 2663680 . + . ID=gene-PHA56_RS12715;Name=mqo;gbkey=Gene;gene=mqo;gene_biotype=protein_coding;locus_tag=PHA56_RS12715;old_locus_tag=PHA56_12720 NZ_CP116214.1 Protein Homology CDS 2662070 2663680 . + 0 ID=cds-WP_232393367.1;Parent=gene-PHA56_RS12715;Dbxref=Genbank:WP_232393367.1;Name=WP_232393367.1;Ontology_term=GO:0006099,GO:0008924;gbkey=CDS;gene=mqo;go_function=malate dehydrogenase (quinone) activity|0008924||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226763.1;locus_tag=PHA56_RS12715;product=malate dehydrogenase (quinone);protein_id=WP_232393367.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2663895 2664821 . + . ID=gene-PHA56_RS12720;Name=PHA56_RS12720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS12720;old_locus_tag=PHA56_12725 NZ_CP116214.1 Protein Homology CDS 2663895 2664821 . + 0 ID=cds-WP_014838635.1;Parent=gene-PHA56_RS12720;Dbxref=Genbank:WP_014838635.1;Name=WP_014838635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226764.1;locus_tag=PHA56_RS12720;product=LysR substrate-binding domain-containing protein;protein_id=WP_014838635.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2664811 2665713 . - . ID=gene-PHA56_RS12725;Name=mdcH;gbkey=Gene;gene=mdcH;gene_biotype=protein_coding;locus_tag=PHA56_RS12725;old_locus_tag=PHA56_12730 NZ_CP116214.1 Protein Homology CDS 2664811 2665713 . - 0 ID=cds-WP_048262148.1;Parent=gene-PHA56_RS12725;Dbxref=Genbank:WP_048262148.1;Name=WP_048262148.1;Ontology_term=GO:0016740;gbkey=CDS;gene=mdcH;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017145770.1;locus_tag=PHA56_RS12725;product=malonate decarboxylase subunit epsilon;protein_id=WP_048262148.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2665710 2666330 . - . ID=gene-PHA56_RS12730;Name=PHA56_RS12730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS12730;old_locus_tag=PHA56_12735 NZ_CP116214.1 Protein Homology CDS 2665710 2666330 . - 0 ID=cds-WP_049082733.1;Parent=gene-PHA56_RS12730;Dbxref=Genbank:WP_049082733.1;Name=WP_049082733.1;Ontology_term=GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014838633.1;locus_tag=PHA56_RS12730;product=malonate decarboxylase holo-ACP synthase;protein_id=WP_049082733.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2666333 2667292 . - . ID=gene-PHA56_RS12735;Name=PHA56_RS12735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS12735;old_locus_tag=PHA56_12740 NZ_CP116214.1 Protein Homology CDS 2666333 2667292 . - 0 ID=cds-WP_004851304.1;Parent=gene-PHA56_RS12735;Dbxref=Genbank:WP_004851304.1;Name=WP_004851304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226767.1;locus_tag=PHA56_RS12735;product=AEC family transporter;protein_id=WP_004851304.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2667422 2668222 . - . ID=gene-PHA56_RS12740;Name=mdcE;gbkey=Gene;gene=mdcE;gene_biotype=protein_coding;locus_tag=PHA56_RS12740;old_locus_tag=PHA56_12745 NZ_CP116214.1 Protein Homology CDS 2667422 2668222 . - 0 ID=cds-WP_064377284.1;Parent=gene-PHA56_RS12740;Dbxref=Genbank:WP_064377284.1;Name=WP_064377284.1;Ontology_term=GO:0044262;gbkey=CDS;gene=mdcE;go_process=cellular carbohydrate metabolic process|0044262||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226768.1;locus_tag=PHA56_RS12740;product=biotin-independent malonate decarboxylase subunit gamma;protein_id=WP_064377284.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2668222 2669055 . - . ID=gene-PHA56_RS12745;Name=PHA56_RS12745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS12745;old_locus_tag=PHA56_12750 NZ_CP116214.1 Protein Homology CDS 2668222 2669055 . - 0 ID=cds-WP_064377285.1;Parent=gene-PHA56_RS12745;Dbxref=Genbank:WP_064377285.1;Name=WP_064377285.1;Ontology_term=GO:0006633,GO:0044262,GO:0003989,GO:0016831,GO:0009317;gbkey=CDS;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA,carboxy-lyase activity|0016831||IEA;go_process=fatty acid biosynthetic process|0006633||IEA,cellular carbohydrate metabolic process|0044262||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226769.1;locus_tag=PHA56_RS12745;product=biotin-independent malonate decarboxylase subunit beta;protein_id=WP_064377285.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2669048 2669347 . - . ID=gene-PHA56_RS12750;Name=mdcC;gbkey=Gene;gene=mdcC;gene_biotype=protein_coding;locus_tag=PHA56_RS12750;old_locus_tag=PHA56_12755 NZ_CP116214.1 Protein Homology CDS 2669048 2669347 . - 0 ID=cds-WP_004102520.1;Parent=gene-PHA56_RS12750;Dbxref=Genbank:WP_004102520.1;Name=WP_004102520.1;gbkey=CDS;gene=mdcC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226770.1;locus_tag=PHA56_RS12750;product=malonate decarboxylase acyl carrier protein;protein_id=WP_004102520.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2669365 2670207 . - . ID=gene-PHA56_RS12755;Name=PHA56_RS12755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS12755;old_locus_tag=PHA56_12760 NZ_CP116214.1 Protein Homology CDS 2669365 2670207 . - 0 ID=cds-WP_048262144.1;Parent=gene-PHA56_RS12755;Dbxref=Genbank:WP_048262144.1;Name=WP_048262144.1;Ontology_term=GO:0016310,GO:0005524,GO:0046917;gbkey=CDS;go_function=ATP binding|0005524||IEA,triphosphoribosyl-dephospho-CoA synthase activity|0046917||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014838630.1;locus_tag=PHA56_RS12755;product=triphosphoribosyl-dephospho-CoA synthase;protein_id=WP_048262144.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2670207 2671862 . - . ID=gene-PHA56_RS12760;Name=mdcA;gbkey=Gene;gene=mdcA;gene_biotype=protein_coding;locus_tag=PHA56_RS12760;old_locus_tag=PHA56_12765 NZ_CP116214.1 Protein Homology CDS 2670207 2671862 . - 0 ID=cds-WP_004851289.1;Parent=gene-PHA56_RS12760;Dbxref=Genbank:WP_004851289.1;Name=WP_004851289.1;Ontology_term=GO:0006810,GO:0015451;gbkey=CDS;gene=mdcA;go_function=decarboxylation-driven active transmembrane transporter activity|0015451||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226772.1;locus_tag=PHA56_RS12760;product=malonate decarboxylase subunit alpha;protein_id=WP_004851289.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2672299 2673333 . - . ID=gene-PHA56_RS12765;Name=PHA56_RS12765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS12765;old_locus_tag=PHA56_12770 NZ_CP116214.1 Protein Homology CDS 2672299 2673333 . - 0 ID=cds-WP_004119683.1;Parent=gene-PHA56_RS12765;Dbxref=Genbank:WP_004119683.1;Name=WP_004119683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004102517.1;locus_tag=PHA56_RS12765;product=AI-2E family transporter;protein_id=WP_004119683.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2673860 2674222 . + . ID=gene-PHA56_RS12770;Name=mdtJ;gbkey=Gene;gene=mdtJ;gene_biotype=protein_coding;locus_tag=PHA56_RS12770;old_locus_tag=PHA56_12775 NZ_CP116214.1 Protein Homology CDS 2673860 2674222 . + 0 ID=cds-WP_038424577.1;Parent=gene-PHA56_RS12770;Dbxref=Genbank:WP_038424577.1;Name=WP_038424577.1;Ontology_term=GO:0015848,GO:0015606,GO:0016020;gbkey=CDS;gene=mdtJ;go_component=membrane|0016020||IEA;go_function=spermidine transmembrane transporter activity|0015606||IEA;go_process=spermidine transport|0015848||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015366784.1;locus_tag=PHA56_RS12770;product=multidrug/spermidine efflux SMR transporter subunit MdtJ;protein_id=WP_038424577.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2674209 2674538 . + . ID=gene-PHA56_RS12775;Name=mdtI;gbkey=Gene;gene=mdtI;gene_biotype=protein_coding;locus_tag=PHA56_RS12775;old_locus_tag=PHA56_12780 NZ_CP116214.1 Protein Homology CDS 2674209 2674538 . + 0 ID=cds-WP_004851284.1;Parent=gene-PHA56_RS12775;Dbxref=Genbank:WP_004851284.1;Name=WP_004851284.1;gbkey=CDS;gene=mdtI;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226775.1;locus_tag=PHA56_RS12775;product=multidrug/spermidine efflux SMR transporter subunit MdtI;protein_id=WP_004851284.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2674644 2676800 . + . ID=gene-PHA56_RS12780;Name=PHA56_RS12780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS12780;old_locus_tag=PHA56_12785 NZ_CP116214.1 Protein Homology CDS 2674644 2676800 . + 0 ID=cds-WP_119834639.1;Parent=gene-PHA56_RS12780;Dbxref=Genbank:WP_119834639.1;Name=WP_119834639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016808810.1;locus_tag=PHA56_RS12780;product=bifunctional diguanylate cyclase/phosphodiesterase;protein_id=WP_119834639.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2676805 2677617 . - . ID=gene-PHA56_RS12785;Name=PHA56_RS12785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS12785;old_locus_tag=PHA56_12790 NZ_CP116214.1 Protein Homology CDS 2676805 2677617 . - 0 ID=cds-WP_014229539.1;Parent=gene-PHA56_RS12785;Dbxref=Genbank:WP_014229539.1;Name=WP_014229539.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226777.1;locus_tag=PHA56_RS12785;product=serine protease;protein_id=WP_014229539.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2678421 2678717 . + . ID=gene-PHA56_RS12790;Name=PHA56_RS12790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS12790;old_locus_tag=PHA56_12795 NZ_CP116214.1 Protein Homology CDS 2678421 2678717 . + 0 ID=cds-WP_224266875.1;Parent=gene-PHA56_RS12790;Dbxref=Genbank:WP_224266875.1;Name=WP_224266875.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229538.1;locus_tag=PHA56_RS12790;product=hypothetical protein;protein_id=WP_224266875.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2678830 2679255 . - . ID=gene-PHA56_RS12795;Name=asr;gbkey=Gene;gene=asr;gene_biotype=protein_coding;locus_tag=PHA56_RS12795;old_locus_tag=PHA56_12800 NZ_CP116214.1 Protein Homology CDS 2678830 2679255 . - 0 ID=cds-WP_009654716.1;Parent=gene-PHA56_RS12795;Dbxref=Genbank:WP_009654716.1;Name=WP_009654716.1;gbkey=CDS;gene=asr;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226780.1;locus_tag=PHA56_RS12795;product=acid resistance repetitive basic protein Asr;protein_id=WP_009654716.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2679430 2680917 . - . ID=gene-PHA56_RS12800;Name=PHA56_RS12800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS12800;old_locus_tag=PHA56_12805 NZ_CP116214.1 Protein Homology CDS 2679430 2680917 . - 0 ID=cds-WP_038424575.1;Parent=gene-PHA56_RS12800;Dbxref=Genbank:WP_038424575.1;Name=WP_038424575.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004209775.1;locus_tag=PHA56_RS12800;product=carboxypeptidase M32;protein_id=WP_038424575.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2681218 2681310 . + . ID=gene-PHA56_RS12805;Name=PHA56_RS12805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS12805;old_locus_tag=PHA56_12810 NZ_CP116214.1 Protein Homology CDS 2681218 2681310 . + 0 ID=cds-WP_004851273.1;Parent=gene-PHA56_RS12805;Dbxref=Genbank:WP_004851273.1;Name=WP_004851273.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004206050.1;locus_tag=PHA56_RS12805;product=hypothetical protein;protein_id=WP_004851273.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2681346 2682596 . - . ID=gene-PHA56_RS12810;Name=PHA56_RS12810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS12810;old_locus_tag=PHA56_12815 NZ_CP116214.1 Protein Homology CDS 2681346 2682596 . - 0 ID=cds-WP_038424574.1;Parent=gene-PHA56_RS12810;Dbxref=Genbank:WP_038424574.1;Name=WP_038424574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226783.1;locus_tag=PHA56_RS12810;product=MFS transporter;protein_id=WP_038424574.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2682715 2683608 . + . ID=gene-PHA56_RS12815;Name=PHA56_RS12815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS12815;old_locus_tag=PHA56_12820 NZ_CP116214.1 Protein Homology CDS 2682715 2683608 . + 0 ID=cds-WP_014229534.1;Parent=gene-PHA56_RS12815;Dbxref=Genbank:WP_014229534.1;Name=WP_014229534.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004135628.1;locus_tag=PHA56_RS12815;product=LysR family transcriptional regulator;protein_id=WP_014229534.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2683742 2684962 . + . ID=gene-PHA56_RS12820;Name=PHA56_RS12820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS12820;old_locus_tag=PHA56_12825 NZ_CP116214.1 Protein Homology CDS 2683742 2684962 . + 0 ID=cds-WP_014229533.1;Parent=gene-PHA56_RS12820;Dbxref=Genbank:WP_014229533.1;Name=WP_014229533.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310327.1;locus_tag=PHA56_RS12820;product=ROK family transcriptional regulator;protein_id=WP_014229533.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2685090 2685785 . + . ID=gene-PHA56_RS12825;Name=bioD;gbkey=Gene;gene=bioD;gene_biotype=protein_coding;locus_tag=PHA56_RS12825;old_locus_tag=PHA56_12830 NZ_CP116214.1 Protein Homology CDS 2685090 2685785 . + 0 ID=cds-WP_004851267.1;Parent=gene-PHA56_RS12825;Dbxref=Genbank:WP_004851267.1;Name=WP_004851267.1;Ontology_term=GO:0009102,GO:0004141;gbkey=CDS;gene=bioD;go_function=dethiobiotin synthase activity|0004141||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460449.1;locus_tag=PHA56_RS12825;product=dethiobiotin synthase;protein_id=WP_004851267.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2685738 2687033 . - . ID=gene-PHA56_RS12830;Name=clcB;gbkey=Gene;gene=clcB;gene_biotype=protein_coding;locus_tag=PHA56_RS12830;old_locus_tag=PHA56_12835 NZ_CP116214.1 Protein Homology CDS 2685738 2687033 . - 0 ID=cds-WP_047935461.1;Parent=gene-PHA56_RS12830;Dbxref=Genbank:WP_047935461.1;Name=WP_047935461.1;Ontology_term=GO:0006821,GO:0010447,GO:0005247,GO:0016020;gbkey=CDS;gene=clcB;go_component=membrane|0016020||IEA;go_function=voltage-gated chloride channel activity|0005247||IEA;go_process=chloride transport|0006821||IEA,response to acidic pH|0010447||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014838621.1;locus_tag=PHA56_RS12830;product=voltage-gated ClC-type chloride channel ClcB;protein_id=WP_047935461.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2687175 2687783 . - . ID=gene-PHA56_RS12835;Name=dmsD;gbkey=Gene;gene=dmsD;gene_biotype=protein_coding;locus_tag=PHA56_RS12835;old_locus_tag=PHA56_12840 NZ_CP116214.1 Protein Homology CDS 2687175 2687783 . - 0 ID=cds-WP_038424573.1;Parent=gene-PHA56_RS12835;Dbxref=Genbank:WP_038424573.1;Name=WP_038424573.1;gbkey=CDS;gene=dmsD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226788.1;locus_tag=PHA56_RS12835;product=Tat proofreading chaperone DmsD;protein_id=WP_038424573.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2687824 2688681 . - . ID=gene-PHA56_RS12840;Name=PHA56_RS12840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS12840;old_locus_tag=PHA56_12845 NZ_CP116214.1 Protein Homology CDS 2687824 2688681 . - 0 ID=cds-WP_014229530.1;Parent=gene-PHA56_RS12840;Dbxref=Genbank:WP_014229530.1;Name=WP_014229530.1;Ontology_term=GO:0019645,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004851264.1;locus_tag=PHA56_RS12840;product=dimethyl sulfoxide reductase anchor subunit;protein_id=WP_014229530.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2688683 2689300 . - . ID=gene-PHA56_RS12845;Name=dmsB;gbkey=Gene;gene=dmsB;gene_biotype=protein_coding;locus_tag=PHA56_RS12845;old_locus_tag=PHA56_12850 NZ_CP116214.1 Protein Homology CDS 2688683 2689300 . - 0 ID=cds-WP_032719195.1;Parent=gene-PHA56_RS12845;Dbxref=Genbank:WP_032719195.1;Name=WP_032719195.1;gbkey=CDS;gene=dmsB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226791.1;locus_tag=PHA56_RS12845;product=dimethylsulfoxide reductase subunit B;protein_id=WP_032719195.1;transl_table=11 NZ_CP116214.1 RefSeq pseudogene 2689311 2691746 . - . ID=gene-PHA56_RS12850;Name=PHA56_RS12850;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS12850;old_locus_tag=PHA56_12855;pseudo=true NZ_CP116214.1 Protein Homology CDS 2689311 2691746 . - 0 ID=cds-PHA56_RS12850;Parent=gene-PHA56_RS12850;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014831728.1;locus_tag=PHA56_RS12850;product=dimethyl sulfoxide reductase subunit A;pseudo=true;transl_table=11 NZ_CP116214.1 RefSeq gene 2691898 2692146 . - . ID=gene-PHA56_RS12855;Name=PHA56_RS12855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS12855;old_locus_tag=PHA56_12860 NZ_CP116214.1 Protein Homology CDS 2691898 2692146 . - 0 ID=cds-WP_038424571.1;Parent=gene-PHA56_RS12855;Dbxref=Genbank:WP_038424571.1;Name=WP_038424571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004119709.1;locus_tag=PHA56_RS12855;product=DUF1161 domain-containing protein;protein_id=WP_038424571.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2692249 2692959 . + . ID=gene-PHA56_RS12860;Name=PHA56_RS12860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS12860;old_locus_tag=PHA56_12865 NZ_CP116214.1 Protein Homology CDS 2692249 2692959 . + 0 ID=cds-WP_076752598.1;Parent=gene-PHA56_RS12860;Dbxref=Genbank:WP_076752598.1;Name=WP_076752598.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016808801.1;locus_tag=PHA56_RS12860;product=YnfC family lipoprotein;protein_id=WP_076752598.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2692953 2693513 . - . ID=gene-PHA56_RS12865;Name=speG;gbkey=Gene;gene=speG;gene_biotype=protein_coding;locus_tag=PHA56_RS12865;old_locus_tag=PHA56_12870 NZ_CP116214.1 Protein Homology CDS 2692953 2693513 . - 0 ID=cds-WP_004102449.1;Parent=gene-PHA56_RS12865;Dbxref=Genbank:WP_004102449.1;Name=WP_004102449.1;Ontology_term=GO:0008080;gbkey=CDS;gene=speG;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226795.1;locus_tag=PHA56_RS12865;product=spermidine N1-acetyltransferase;protein_id=WP_004102449.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2693576 2693917 . - . ID=gene-PHA56_RS12870;Name=PHA56_RS12870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS12870;old_locus_tag=PHA56_12875 NZ_CP116214.1 Protein Homology CDS 2693576 2693917 . - 0 ID=cds-WP_004851259.1;Parent=gene-PHA56_RS12870;Dbxref=Genbank:WP_004851259.1;Name=WP_004851259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226796.1;locus_tag=PHA56_RS12870;product=DUF1283 family protein;protein_id=WP_004851259.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2694054 2694380 . + . ID=gene-PHA56_RS12875;Name=PHA56_RS12875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS12875;old_locus_tag=PHA56_12880 NZ_CP116214.1 Protein Homology CDS 2694054 2694380 . + 0 ID=cds-WP_014229526.1;Parent=gene-PHA56_RS12875;Dbxref=Genbank:WP_014229526.1;Name=WP_014229526.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002903722.1;locus_tag=PHA56_RS12875;product=YnfA family protein;protein_id=WP_014229526.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2694586 2695800 . + . ID=gene-PHA56_RS12880;Name=rspA;gbkey=Gene;gene=rspA;gene_biotype=protein_coding;locus_tag=PHA56_RS12880;old_locus_tag=PHA56_12885 NZ_CP116214.1 Protein Homology CDS 2694586 2695800 . + 0 ID=cds-WP_004851257.1;Parent=gene-PHA56_RS12880;Dbxref=Genbank:WP_004851257.1;Name=WP_004851257.1;gbkey=CDS;gene=rspA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001625315.1;locus_tag=PHA56_RS12880;product=starvation-sensing protein RspA;protein_id=WP_004851257.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2695815 2696834 . + . ID=gene-PHA56_RS12885;Name=PHA56_RS12885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS12885;old_locus_tag=PHA56_12890 NZ_CP116214.1 Protein Homology CDS 2695815 2696834 . + 0 ID=cds-WP_038424569.1;Parent=gene-PHA56_RS12885;Dbxref=Genbank:WP_038424569.1;Name=WP_038424569.1;Ontology_term=GO:0008270,GO:0016491;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017694077.1;locus_tag=PHA56_RS12885;product=Zn-dependent oxidoreductase;protein_id=WP_038424569.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2696878 2698254 . + . ID=gene-PHA56_RS12890;Name=PHA56_RS12890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS12890;old_locus_tag=PHA56_12895 NZ_CP116214.1 Protein Homology CDS 2696878 2698254 . + 0 ID=cds-WP_029946863.1;Parent=gene-PHA56_RS12890;Dbxref=Genbank:WP_029946863.1;Name=WP_029946863.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004851254.1;locus_tag=PHA56_RS12890;product=MFS transporter;protein_id=WP_029946863.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2698489 2699952 . + . ID=gene-PHA56_RS12895;Name=PHA56_RS12895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS12895;old_locus_tag=PHA56_12900 NZ_CP116214.1 Protein Homology CDS 2698489 2699952 . + 0 ID=cds-WP_038424964.1;Parent=gene-PHA56_RS12895;Dbxref=Genbank:WP_038424964.1;Name=WP_038424964.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004102437.1;locus_tag=PHA56_RS12895;product=mannitol dehydrogenase family protein;protein_id=WP_038424964.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2700230 2700661 . + . ID=gene-PHA56_RS12900;Name=PHA56_RS12900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS12900;old_locus_tag=PHA56_12905 NZ_CP116214.1 Protein Homology CDS 2700230 2700661 . + 0 ID=cds-WP_025105778.1;Parent=gene-PHA56_RS12900;Dbxref=Genbank:WP_025105778.1;Name=WP_025105778.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226800.1;locus_tag=PHA56_RS12900;product=universal stress protein;protein_id=WP_025105778.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2700705 2701391 . - . ID=gene-PHA56_RS12905;Name=PHA56_RS12905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS12905;old_locus_tag=PHA56_12910 NZ_CP116214.1 Protein Homology CDS 2700705 2701391 . - 0 ID=cds-WP_004851246.1;Parent=gene-PHA56_RS12905;Dbxref=Genbank:WP_004851246.1;Name=WP_004851246.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226801.1;locus_tag=PHA56_RS12905;product=GntR family transcriptional regulator;protein_id=WP_004851246.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2701482 2702231 . - . ID=gene-PHA56_RS12910;Name=ydfG;gbkey=Gene;gene=ydfG;gene_biotype=protein_coding;locus_tag=PHA56_RS12910;old_locus_tag=PHA56_12915 NZ_CP116214.1 Protein Homology CDS 2701482 2702231 . - 0 ID=cds-WP_004851244.1;Parent=gene-PHA56_RS12910;Dbxref=Genbank:WP_004851244.1;Name=WP_004851244.1;Ontology_term=GO:0016491;gbkey=CDS;gene=ydfG;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226802.1;locus_tag=PHA56_RS12910;product=bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG;protein_id=WP_004851244.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2702403 2704445 . + . ID=gene-PHA56_RS12915;Name=dcp;gbkey=Gene;gene=dcp;gene_biotype=protein_coding;locus_tag=PHA56_RS12915;old_locus_tag=PHA56_12920 NZ_CP116214.1 Protein Homology CDS 2702403 2704445 . + 0 ID=cds-WP_119834638.1;Parent=gene-PHA56_RS12915;Dbxref=Genbank:WP_119834638.1;Name=WP_119834638.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=dcp;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004102433.1;locus_tag=PHA56_RS12915;product=peptidyl-dipeptidase Dcp;protein_id=WP_119834638.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2704598 2705737 . - . ID=gene-PHA56_RS12920;Name=PHA56_RS12920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS12920;old_locus_tag=PHA56_12925 NZ_CP116214.1 Protein Homology CDS 2704598 2705737 . - 0 ID=cds-WP_119834637.1;Parent=gene-PHA56_RS12920;Dbxref=Genbank:WP_119834637.1;Name=WP_119834637.1;Ontology_term=GO:0015074,GO:0003677,GO:0008907;gbkey=CDS;go_function=DNA binding|0003677||IEA,integrase activity|0008907||IEA;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020804296.1;locus_tag=PHA56_RS12920;product=phage integrase Arm DNA-binding domain-containing protein;protein_id=WP_119834637.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2705718 2705975 . - . ID=gene-PHA56_RS12925;Name=PHA56_RS12925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS12925;old_locus_tag=PHA56_12930 NZ_CP116214.1 Protein Homology CDS 2705718 2705975 . - 0 ID=cds-WP_119834636.1;Parent=gene-PHA56_RS12925;Dbxref=Genbank:WP_119834636.1;Name=WP_119834636.1;Ontology_term=GO:0006310,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012541846.1;locus_tag=PHA56_RS12925;product=excisionase;protein_id=WP_119834636.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2706035 2706274 . - . ID=gene-PHA56_RS12930;Name=PHA56_RS12930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS12930;old_locus_tag=PHA56_12935 NZ_CP116214.1 Protein Homology CDS 2706035 2706274 . - 0 ID=cds-WP_048262120.1;Parent=gene-PHA56_RS12930;Dbxref=Genbank:WP_048262120.1;Name=WP_048262120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004184543.1;locus_tag=PHA56_RS12930;product=DUF4060 family protein;protein_id=WP_048262120.1;transl_table=11 NZ_CP116214.1 RefSeq pseudogene 2706315 2707474 . - . ID=gene-PHA56_RS12935;Name=PHA56_RS12935;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS12935;old_locus_tag=PHA56_12940;pseudo=true NZ_CP116214.1 Protein Homology CDS 2706315 2707474 . - 0 ID=cds-PHA56_RS12935;Parent=gene-PHA56_RS12935;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459983.3;locus_tag=PHA56_RS12935;product=recombinase RecT;pseudo=true;transl_table=11 NZ_CP116214.1 RefSeq gene 2707437 2710334 . - . ID=gene-PHA56_RS12940;Name=PHA56_RS12940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS12940;old_locus_tag=PHA56_12945 NZ_CP116214.1 Protein Homology CDS 2707437 2710334 . - 0 ID=cds-WP_119834634.1;Parent=gene-PHA56_RS12940;Dbxref=Genbank:WP_119834634.1;Name=WP_119834634.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020804297.1;locus_tag=PHA56_RS12940;product=PD-(D/E)XK nuclease-like domain-containing protein;protein_id=WP_119834634.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2710471 2710629 . - . ID=gene-PHA56_RS12945;Name=PHA56_RS12945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS12945;old_locus_tag=PHA56_12950 NZ_CP116214.1 Protein Homology CDS 2710471 2710629 . - 0 ID=cds-WP_072057128.1;Parent=gene-PHA56_RS12945;Dbxref=Genbank:WP_072057128.1;Name=WP_072057128.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000917560.1;locus_tag=PHA56_RS12945;product=YdaE family protein;protein_id=WP_072057128.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2710638 2710829 . - . ID=gene-PHA56_RS12950;Name=PHA56_RS12950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS12950;old_locus_tag=PHA56_12955 NZ_CP116214.1 Protein Homology CDS 2710638 2710829 . - 0 ID=cds-WP_024274354.1;Parent=gene-PHA56_RS12950;Dbxref=Genbank:WP_024274354.1;Name=WP_024274354.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004139465.1;locus_tag=PHA56_RS12950;product=DUF1482 family protein;protein_id=WP_024274354.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2710829 2711023 . - . ID=gene-PHA56_RS12955;Name=PHA56_RS12955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS12955;old_locus_tag=PHA56_12960 NZ_CP116214.1 Protein Homology CDS 2710829 2711023 . - 0 ID=cds-WP_071988222.1;Parent=gene-PHA56_RS12955;Dbxref=Genbank:WP_071988222.1;Name=WP_071988222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004151303.1;locus_tag=PHA56_RS12955;product=hypothetical protein;protein_id=WP_071988222.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2711303 2711710 . - . ID=gene-PHA56_RS12960;Name=PHA56_RS12960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS12960;old_locus_tag=PHA56_12965 NZ_CP116214.1 Protein Homology CDS 2711303 2711710 . - 0 ID=cds-WP_048262114.1;Parent=gene-PHA56_RS12960;Dbxref=Genbank:WP_048262114.1;Name=WP_048262114.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459987.1;locus_tag=PHA56_RS12960;product=helix-turn-helix domain-containing protein;protein_id=WP_048262114.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2711831 2712061 . + . ID=gene-PHA56_RS12965;Name=PHA56_RS12965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS12965;old_locus_tag=PHA56_12970 NZ_CP116214.1 Protein Homology CDS 2711831 2712061 . + 0 ID=cds-WP_048262113.1;Parent=gene-PHA56_RS12965;Dbxref=Genbank:WP_048262113.1;Name=WP_048262113.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004216921.1;locus_tag=PHA56_RS12965;product=YdaS family helix-turn-helix protein;protein_id=WP_048262113.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2712064 2712600 . + . ID=gene-PHA56_RS12970;Name=PHA56_RS12970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS12970;old_locus_tag=PHA56_12975 NZ_CP116214.1 Protein Homology CDS 2712064 2712600 . + 0 ID=cds-WP_119834633.1;Parent=gene-PHA56_RS12970;Dbxref=Genbank:WP_119834633.1;Name=WP_119834633.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012967871.1;locus_tag=PHA56_RS12970;product=toxin YdaT domain-containing protein;protein_id=WP_119834633.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2712729 2713523 . + . ID=gene-PHA56_RS12975;Name=PHA56_RS12975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS12975;old_locus_tag=PHA56_12980 NZ_CP116214.1 Protein Homology CDS 2712729 2713523 . + 0 ID=cds-WP_046876618.1;Parent=gene-PHA56_RS12975;Dbxref=Genbank:WP_046876618.1;Name=WP_046876618.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004190704.1;locus_tag=PHA56_RS12975;product=ParB/RepB/Spo0J family partition protein;protein_id=WP_046876618.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2713541 2714422 . + . ID=gene-PHA56_RS12980;Name=PHA56_RS12980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS12980;old_locus_tag=PHA56_12985 NZ_CP116214.1 Protein Homology CDS 2713541 2714422 . + 0 ID=cds-WP_196551832.1;Parent=gene-PHA56_RS12980;Dbxref=Genbank:WP_196551832.1;Name=WP_196551832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015958287.1;locus_tag=PHA56_RS12980;product=hypothetical protein;protein_id=WP_196551832.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2714425 2715174 . + . ID=gene-PHA56_RS12985;Name=PHA56_RS12985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS12985;old_locus_tag=PHA56_12990 NZ_CP116214.1 Protein Homology CDS 2714425 2715174 . + 0 ID=cds-WP_148842138.1;Parent=gene-PHA56_RS12985;Dbxref=Genbank:WP_148842138.1;Name=WP_148842138.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459990.1;locus_tag=PHA56_RS12985;product=ATP-binding protein;protein_id=WP_148842138.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2715181 2715447 . + . ID=gene-PHA56_RS12990;Name=PHA56_RS12990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS12990;old_locus_tag=PHA56_12995 NZ_CP116214.1 Protein Homology CDS 2715181 2715447 . + 0 ID=cds-WP_119834631.1;Parent=gene-PHA56_RS12990;Dbxref=Genbank:WP_119834631.1;Name=WP_119834631.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017929.2;locus_tag=PHA56_RS12990;product=DUF977 family protein;protein_id=WP_119834631.1;transl_table=11 NZ_CP116214.1 RefSeq pseudogene 2715444 2716064 . + . ID=gene-PHA56_RS12995;Name=PHA56_RS12995;end_range=2716064,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS12995;old_locus_tag=PHA56_13000;partial=true;pseudo=true NZ_CP116214.1 Protein Homology CDS 2715444 2716064 . + 0 ID=cds-PHA56_RS12995;Parent=gene-PHA56_RS12995;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2716064,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020803811.1;locus_tag=PHA56_RS12995;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP116214.1 RefSeq gene 2716301 2716771 . + . ID=gene-PHA56_RS13000;Name=PHA56_RS13000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13000;old_locus_tag=PHA56_13005 NZ_CP116214.1 Protein Homology CDS 2716301 2716771 . + 0 ID=cds-WP_077257474.1;Parent=gene-PHA56_RS13000;Dbxref=Genbank:WP_077257474.1;Name=WP_077257474.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016947066.1;locus_tag=PHA56_RS13000;product=hypothetical protein;protein_id=WP_077257474.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2716771 2717028 . + . ID=gene-PHA56_RS13005;Name=PHA56_RS13005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13005;old_locus_tag=PHA56_13010 NZ_CP116214.1 Protein Homology CDS 2716771 2717028 . + 0 ID=cds-WP_046876623.1;Parent=gene-PHA56_RS13005;Dbxref=Genbank:WP_046876623.1;Name=WP_046876623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004103037.1;locus_tag=PHA56_RS13005;product=hypothetical protein;protein_id=WP_046876623.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2717025 2719010 . + . ID=gene-PHA56_RS13010;Name=PHA56_RS13010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13010;old_locus_tag=PHA56_13015 NZ_CP116214.1 Protein Homology CDS 2717025 2719010 . + 0 ID=cds-WP_046876624.1;Parent=gene-PHA56_RS13010;Dbxref=Genbank:WP_046876624.1;Name=WP_046876624.1;Ontology_term=GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016156703.1;locus_tag=PHA56_RS13010;product=DNA cytosine methyltransferase;protein_id=WP_046876624.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2719262 2719555 . + . ID=gene-PHA56_RS13015;Name=PHA56_RS13015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13015;old_locus_tag=PHA56_13020 NZ_CP116214.1 Protein Homology CDS 2719262 2719555 . + 0 ID=cds-WP_046876625.1;Parent=gene-PHA56_RS13015;Dbxref=Genbank:WP_046876625.1;Name=WP_046876625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004111726.1;locus_tag=PHA56_RS13015;product=hypothetical protein;protein_id=WP_046876625.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2719801 2720142 . - . ID=gene-PHA56_RS13020;Name=PHA56_RS13020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13020;old_locus_tag=PHA56_13025 NZ_CP116214.1 GeneMarkS-2+ CDS 2719801 2720142 . - 0 ID=cds-WP_139153597.1;Parent=gene-PHA56_RS13020;Dbxref=Genbank:WP_139153597.1;Name=WP_139153597.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PHA56_RS13020;product=hypothetical protein;protein_id=WP_139153597.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2720461 2720694 . + . ID=gene-PHA56_RS13025;Name=PHA56_RS13025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13025;old_locus_tag=PHA56_13030 NZ_CP116214.1 Protein Homology CDS 2720461 2720694 . + 0 ID=cds-WP_046876626.1;Parent=gene-PHA56_RS13025;Dbxref=Genbank:WP_046876626.1;Name=WP_046876626.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004121604.1;locus_tag=PHA56_RS13025;product=DinI-like family protein;protein_id=WP_046876626.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2721104 2721703 . + . ID=gene-PHA56_RS13030;Name=PHA56_RS13030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13030;old_locus_tag=PHA56_13035 NZ_CP116214.1 Protein Homology CDS 2721104 2721703 . + 0 ID=cds-WP_119834630.1;Parent=gene-PHA56_RS13030;Dbxref=Genbank:WP_119834630.1;Name=WP_119834630.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016066208.1;locus_tag=PHA56_RS13030;product=DUF1367 family protein;protein_id=WP_119834630.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2721703 2721909 . + . ID=gene-PHA56_RS13035;Name=PHA56_RS13035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13035;old_locus_tag=PHA56_13040 NZ_CP116214.1 Protein Homology CDS 2721703 2721909 . + 0 ID=cds-WP_101868674.1;Parent=gene-PHA56_RS13035;Dbxref=Genbank:WP_101868674.1;Name=WP_101868674.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004121596.1;locus_tag=PHA56_RS13035;product=hypothetical protein;protein_id=WP_101868674.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2721912 2722208 . + . ID=gene-PHA56_RS13040;Name=PHA56_RS13040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13040;old_locus_tag=PHA56_13045 NZ_CP116214.1 Protein Homology CDS 2721912 2722208 . + 0 ID=cds-WP_032418472.1;Parent=gene-PHA56_RS13040;Dbxref=Genbank:WP_032418472.1;Name=WP_032418472.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004139422.1;locus_tag=PHA56_RS13040;product=DUF1364 domain-containing protein;protein_id=WP_032418472.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2722205 2722567 . + . ID=gene-PHA56_RS13045;Name=PHA56_RS13045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13045;old_locus_tag=PHA56_13050 NZ_CP116214.1 Protein Homology CDS 2722205 2722567 . + 0 ID=cds-WP_119834629.1;Parent=gene-PHA56_RS13045;Dbxref=Genbank:WP_119834629.1;Name=WP_119834629.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000708246.1;locus_tag=PHA56_RS13045;product=RusA family crossover junction endodeoxyribonuclease;protein_id=WP_119834629.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2722557 2722688 . + . ID=gene-PHA56_RS13050;Name=PHA56_RS13050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13050;old_locus_tag=PHA56_13055 NZ_CP116214.1 Protein Homology CDS 2722557 2722688 . + 0 ID=cds-WP_119834628.1;Parent=gene-PHA56_RS13050;Dbxref=Genbank:WP_119834628.1;Name=WP_119834628.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012541836.1;locus_tag=PHA56_RS13050;product=YlcG family protein;protein_id=WP_119834628.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2722691 2723488 . + . ID=gene-PHA56_RS13055;Name=PHA56_RS13055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13055;old_locus_tag=PHA56_13060 NZ_CP116214.1 Protein Homology CDS 2722691 2723488 . + 0 ID=cds-WP_119834627.1;Parent=gene-PHA56_RS13055;Dbxref=Genbank:WP_119834627.1;Name=WP_119834627.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459997.1;locus_tag=PHA56_RS13055;product=antitermination protein;protein_id=WP_119834627.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2723721 2724116 . - . ID=gene-PHA56_RS13060;Name=PHA56_RS13060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13060;old_locus_tag=PHA56_13065 NZ_CP116214.1 GeneMarkS-2+ CDS 2723721 2724116 . - 0 ID=cds-WP_142476025.1;Parent=gene-PHA56_RS13060;Dbxref=Genbank:WP_142476025.1;Name=WP_142476025.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PHA56_RS13060;product=hypothetical protein;protein_id=WP_142476025.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2724751 2725377 . + . ID=gene-PHA56_RS13065;Name=PHA56_RS13065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13065;old_locus_tag=PHA56_13070 NZ_CP116214.1 Protein Homology CDS 2724751 2725377 . + 0 ID=cds-WP_049098775.1;Parent=gene-PHA56_RS13065;Dbxref=Genbank:WP_049098775.1;Name=WP_049098775.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004184495.1;locus_tag=PHA56_RS13065;product=YagU family protein;protein_id=WP_049098775.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2726301 2726600 . + . ID=gene-PHA56_RS13070;Name=PHA56_RS13070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13070;old_locus_tag=PHA56_13075 NZ_CP116214.1 Protein Homology CDS 2726301 2726600 . + 0 ID=cds-WP_031280382.1;Parent=gene-PHA56_RS13070;Dbxref=Genbank:WP_031280382.1;Name=WP_031280382.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004136187.1;locus_tag=PHA56_RS13070;product=phage holin family protein;protein_id=WP_031280382.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2726597 2727139 . + . ID=gene-PHA56_RS13075;Name=PHA56_RS13075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13075;old_locus_tag=PHA56_13080 NZ_CP116214.1 Protein Homology CDS 2726597 2727139 . + 0 ID=cds-WP_119834625.1;Parent=gene-PHA56_RS13075;Dbxref=Genbank:WP_119834625.1;Name=WP_119834625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004103018.1;locus_tag=PHA56_RS13075;product=glycosyl hydrolase 108 family protein;protein_id=WP_119834625.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2727136 2727480 . + . ID=gene-PHA56_RS13080;Name=PHA56_RS13080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13080;old_locus_tag=PHA56_13085 NZ_CP116214.1 Protein Homology CDS 2727136 2727480 . + 0 ID=cds-WP_119834624.1;Parent=gene-PHA56_RS13080;Dbxref=Genbank:WP_119834624.1;Name=WP_119834624.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004184485.1;locus_tag=PHA56_RS13080;product=hypothetical protein;protein_id=WP_119834624.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2727477 2727752 . + . ID=gene-PHA56_RS13085;Name=PHA56_RS13085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13085;old_locus_tag=PHA56_13090 NZ_CP116214.1 Protein Homology CDS 2727477 2727752 . + 0 ID=cds-WP_119834623.1;Parent=gene-PHA56_RS13085;Dbxref=Genbank:WP_119834623.1;Name=WP_119834623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016809735.1;locus_tag=PHA56_RS13085;product=hypothetical protein;protein_id=WP_119834623.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2727703 2727885 . + . ID=gene-PHA56_RS13090;Name=PHA56_RS13090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13090;old_locus_tag=PHA56_13095 NZ_CP116214.1 Protein Homology CDS 2727703 2727885 . + 0 ID=cds-WP_119834622.1;Parent=gene-PHA56_RS13090;Dbxref=Genbank:WP_119834622.1;Name=WP_119834622.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016831931.1;locus_tag=PHA56_RS13090;product=hypothetical protein;protein_id=WP_119834622.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2727984 2728568 . + . ID=gene-PHA56_RS13095;Name=PHA56_RS13095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13095;old_locus_tag=PHA56_13100 NZ_CP116214.1 GeneMarkS-2+ CDS 2727984 2728568 . + 0 ID=cds-WP_119834621.1;Parent=gene-PHA56_RS13095;Dbxref=Genbank:WP_119834621.1;Name=WP_119834621.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PHA56_RS13095;product=hypothetical protein;protein_id=WP_119834621.1;transl_table=11 NZ_CP116214.1 RefSeq pseudogene 2728659 2728817 . + . ID=gene-PHA56_RS13100;Name=PHA56_RS13100;end_range=2728817,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS13100;old_locus_tag=PHA56_13105;partial=true;pseudo=true NZ_CP116214.1 Protein Homology CDS 2728659 2728817 . + 0 ID=cds-PHA56_RS13100;Parent=gene-PHA56_RS13100;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2728817,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004121567.1;locus_tag=PHA56_RS13100;partial=true;product=DUF2560 family protein;pseudo=true;transl_table=11 NZ_CP116214.1 RefSeq gene 2728855 2730056 . - . ID=gene-PHA56_RS13105;Name=PHA56_RS13105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13105;old_locus_tag=PHA56_13110 NZ_CP116214.1 Protein Homology CDS 2729741 2730056 . - 0 ID=cds-WP_096913407.1;Parent=gene-PHA56_RS13105;Dbxref=Genbank:WP_096913407.1;Name=WP_096913407.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558215.1;locus_tag=PHA56_RS13105;product=IS3 family transposase;protein_id=WP_096913407.1;transl_table=11 NZ_CP116214.1 Protein Homology CDS 2728855 2729741 . - 2 ID=cds-WP_096913407.1;Parent=gene-PHA56_RS13105;Dbxref=Genbank:WP_096913407.1;Name=WP_096913407.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558215.1;locus_tag=PHA56_RS13105;product=IS3 family transposase;protein_id=WP_096913407.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2730280 2730573 . - . ID=gene-PHA56_RS13110;Name=PHA56_RS13110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13110;old_locus_tag=PHA56_13115 NZ_CP116214.1 GeneMarkS-2+ CDS 2730280 2730573 . - 0 ID=cds-WP_119834619.1;Parent=gene-PHA56_RS13110;Dbxref=Genbank:WP_119834619.1;Name=WP_119834619.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PHA56_RS13110;product=hypothetical protein;protein_id=WP_119834619.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2730654 2731658 . + . ID=gene-PHA56_RS13115;Name=PHA56_RS13115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13115;old_locus_tag=PHA56_13120 NZ_CP116214.1 Protein Homology CDS 2730654 2731658 . + 0 ID=cds-WP_119834618.1;Parent=gene-PHA56_RS13115;Dbxref=Genbank:WP_119834618.1;Name=WP_119834618.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016831936.1;locus_tag=PHA56_RS13115;product=terminase small subunit;protein_id=WP_119834618.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2731636 2732940 . + . ID=gene-PHA56_RS13120;Name=PHA56_RS13120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13120;old_locus_tag=PHA56_13125 NZ_CP116214.1 Protein Homology CDS 2731636 2732940 . + 0 ID=cds-WP_024359392.1;Parent=gene-PHA56_RS13120;Dbxref=Genbank:WP_024359392.1;Name=WP_024359392.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004184473.1;locus_tag=PHA56_RS13120;product=terminase family protein;protein_id=WP_024359392.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2732945 2734351 . + . ID=gene-PHA56_RS13125;Name=PHA56_RS13125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13125;old_locus_tag=PHA56_13130 NZ_CP116214.1 Protein Homology CDS 2732945 2734351 . + 0 ID=cds-WP_119834617.1;Parent=gene-PHA56_RS13125;Dbxref=Genbank:WP_119834617.1;Name=WP_119834617.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016160816.1;locus_tag=PHA56_RS13125;product=DUF4055 domain-containing protein;protein_id=WP_119834617.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2734353 2735465 . + . ID=gene-PHA56_RS13130;Name=PHA56_RS13130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13130;old_locus_tag=PHA56_13135 NZ_CP116214.1 Protein Homology CDS 2734353 2735465 . + 0 ID=cds-WP_119834616.1;Parent=gene-PHA56_RS13130;Dbxref=Genbank:WP_119834616.1;Name=WP_119834616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001645719.1;locus_tag=PHA56_RS13130;product=phage minor head protein;protein_id=WP_119834616.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2735570 2736334 . + . ID=gene-PHA56_RS13135;Name=PHA56_RS13135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13135;old_locus_tag=PHA56_13140 NZ_CP116214.1 Protein Homology CDS 2735570 2736334 . + 0 ID=cds-WP_101868303.1;Parent=gene-PHA56_RS13135;Dbxref=Genbank:WP_101868303.1;Name=WP_101868303.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016160818.1;locus_tag=PHA56_RS13135;product=hypothetical protein;protein_id=WP_101868303.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2736422 2737558 . + . ID=gene-PHA56_RS13140;Name=PHA56_RS13140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13140;old_locus_tag=PHA56_13145 NZ_CP116214.1 Protein Homology CDS 2736422 2737558 . + 0 ID=cds-WP_119834615.1;Parent=gene-PHA56_RS13140;Dbxref=Genbank:WP_119834615.1;Name=WP_119834615.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000918482.1;locus_tag=PHA56_RS13140;product=P22 phage major capsid protein family protein;protein_id=WP_119834615.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2737597 2737866 . + . ID=gene-PHA56_RS13145;Name=PHA56_RS13145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13145;old_locus_tag=PHA56_13150 NZ_CP116214.1 Protein Homology CDS 2737597 2737866 . + 0 ID=cds-WP_119834614.1;Parent=gene-PHA56_RS13145;Dbxref=Genbank:WP_119834614.1;Name=WP_119834614.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004121546.1;locus_tag=PHA56_RS13145;product=hypothetical protein;protein_id=WP_119834614.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2737870 2738280 . + . ID=gene-PHA56_RS13150;Name=PHA56_RS13150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13150;old_locus_tag=PHA56_13155 NZ_CP116214.1 Protein Homology CDS 2737870 2738280 . + 0 ID=cds-WP_119834613.1;Parent=gene-PHA56_RS13150;Dbxref=Genbank:WP_119834613.1;Name=WP_119834613.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004146200.1;locus_tag=PHA56_RS13150;product=protein singed;protein_id=WP_119834613.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2738282 2738536 . + . ID=gene-PHA56_RS13155;Name=PHA56_RS13155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13155;old_locus_tag=PHA56_13160 NZ_CP116214.1 Protein Homology CDS 2738282 2738536 . + 0 ID=cds-WP_119834612.1;Parent=gene-PHA56_RS13155;Dbxref=Genbank:WP_119834612.1;Name=WP_119834612.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004190649.1;locus_tag=PHA56_RS13155;product=hypothetical protein;protein_id=WP_119834612.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2738546 2738827 . + . ID=gene-PHA56_RS13160;Name=PHA56_RS13160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13160;old_locus_tag=PHA56_13165 NZ_CP116214.1 Protein Homology CDS 2738546 2738827 . + 0 ID=cds-WP_119834611.1;Parent=gene-PHA56_RS13160;Dbxref=Genbank:WP_119834611.1;Name=WP_119834611.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016160821.1;locus_tag=PHA56_RS13160;product=hypothetical protein;protein_id=WP_119834611.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2738814 2739197 . + . ID=gene-PHA56_RS13165;Name=PHA56_RS13165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13165;old_locus_tag=PHA56_13170 NZ_CP116214.1 Protein Homology CDS 2738814 2739197 . + 0 ID=cds-WP_119834610.1;Parent=gene-PHA56_RS13165;Dbxref=Genbank:WP_119834610.1;Name=WP_119834610.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016160822.1;locus_tag=PHA56_RS13165;product=glutamate 5-kinase;protein_id=WP_119834610.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2739199 2739750 . + . ID=gene-PHA56_RS13170;Name=PHA56_RS13170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13170;old_locus_tag=PHA56_13175 NZ_CP116214.1 Protein Homology CDS 2739199 2739750 . + 0 ID=cds-WP_119834609.1;Parent=gene-PHA56_RS13170;Dbxref=Genbank:WP_119834609.1;Name=WP_119834609.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008807839.1;locus_tag=PHA56_RS13170;product=hypothetical protein;protein_id=WP_119834609.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2739747 2740139 . + . ID=gene-PHA56_RS13175;Name=PHA56_RS13175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13175;old_locus_tag=PHA56_13180 NZ_CP116214.1 Protein Homology CDS 2739747 2740139 . + 0 ID=cds-WP_119834608.1;Parent=gene-PHA56_RS13175;Dbxref=Genbank:WP_119834608.1;Name=WP_119834608.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121013.1;locus_tag=PHA56_RS13175;product=phage tail terminator-like protein;protein_id=WP_119834608.1;transl_table=11 NZ_CP116214.1 RefSeq pseudogene 2740163 2741090 . + . ID=gene-PHA56_RS13180;Name=PHA56_RS13180;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS13180;old_locus_tag=PHA56_13185;pseudo=true NZ_CP116214.1 Protein Homology CDS 2740163 2741090 . + 0 ID=cds-PHA56_RS13180;Parent=gene-PHA56_RS13180;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004184443.1;locus_tag=PHA56_RS13180;product=phage tail tube protein;pseudo=true;transl_table=11 NZ_CP116214.1 RefSeq gene 2741129 2741611 . + . ID=gene-PHA56_RS13185;Name=PHA56_RS13185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13185;old_locus_tag=PHA56_13190 NZ_CP116214.1 Protein Homology CDS 2741129 2741611 . + 0 ID=cds-WP_119834606.1;Parent=gene-PHA56_RS13185;Dbxref=Genbank:WP_119834606.1;Name=WP_119834606.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004190637.1;locus_tag=PHA56_RS13185;product=hypothetical protein;protein_id=WP_119834606.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2742285 2743061 . + . ID=gene-PHA56_RS13190;Name=PHA56_RS13190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13190;old_locus_tag=PHA56_13195 NZ_CP116214.1 GeneMarkS-2+ CDS 2742285 2743061 . + 0 ID=cds-WP_271292973.1;Parent=gene-PHA56_RS13190;Dbxref=Genbank:WP_271292973.1;Name=WP_271292973.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PHA56_RS13190;product=hypothetical protein;protein_id=WP_271292973.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2743232 2743447 . + . ID=gene-PHA56_RS13195;Name=PHA56_RS13195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13195;old_locus_tag=PHA56_13200 NZ_CP116214.1 GeneMarkS-2+ CDS 2743232 2743447 . + 0 ID=cds-WP_271292974.1;Parent=gene-PHA56_RS13195;Dbxref=Genbank:WP_271292974.1;Name=WP_271292974.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PHA56_RS13195;product=hypothetical protein;protein_id=WP_271292974.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2743646 2744766 . - . ID=gene-PHA56_RS13200;Name=PHA56_RS13200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13200;old_locus_tag=PHA56_13205 NZ_CP116214.1 Protein Homology CDS 2744508 2744766 . - 0 ID=cds-WP_085956072.1-3;Parent=gene-PHA56_RS13200;Dbxref=Genbank:WP_085956072.1;Name=WP_085956072.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611473.1;locus_tag=PHA56_RS13200;product=IS3-like element ISKpn34 family transposase;protein_id=WP_085956072.1;transl_table=11 NZ_CP116214.1 Protein Homology CDS 2743646 2744508 . - 2 ID=cds-WP_085956072.1-3;Parent=gene-PHA56_RS13200;Dbxref=Genbank:WP_085956072.1;Name=WP_085956072.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611473.1;locus_tag=PHA56_RS13200;product=IS3-like element ISKpn34 family transposase;protein_id=WP_085956072.1;transl_table=11 NZ_CP116214.1 RefSeq pseudogene 2745031 2745216 . + . ID=gene-PHA56_RS13205;Name=PHA56_RS13205;end_range=2745216,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS13205;old_locus_tag=PHA56_13210;partial=true;pseudo=true;start_range=.,2745031 NZ_CP116214.1 Protein Homology CDS 2745031 2745216 . + 0 ID=cds-PHA56_RS13205;Parent=gene-PHA56_RS13205;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=2745216,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001542260.1;locus_tag=PHA56_RS13205;partial=true;product=DNA translocase FtsK;pseudo=true;start_range=.,2745031;transl_table=11 NZ_CP116214.1 RefSeq gene 2745936 2746439 . + . ID=gene-PHA56_RS13210;Name=PHA56_RS13210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13210;old_locus_tag=PHA56_13215 NZ_CP116214.1 Protein Homology CDS 2745936 2746439 . + 0 ID=cds-WP_119834603.1;Parent=gene-PHA56_RS13210;Dbxref=Genbank:WP_119834603.1;Name=WP_119834603.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022763.2;locus_tag=PHA56_RS13210;product=type VI secretion system-associated protein TagO;protein_id=WP_119834603.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2746557 2749148 . + . ID=gene-PHA56_RS13215;Name=PHA56_RS13215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13215;old_locus_tag=PHA56_13220 NZ_CP116214.1 Protein Homology CDS 2746557 2749148 . + 0 ID=cds-WP_119834602.1;Parent=gene-PHA56_RS13215;Dbxref=Genbank:WP_119834602.1;Name=WP_119834602.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015705686.1;locus_tag=PHA56_RS13215;product=phage tail tape measure protein;protein_id=WP_119834602.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2749145 2749759 . + . ID=gene-PHA56_RS13220;Name=PHA56_RS13220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13220;old_locus_tag=PHA56_13225 NZ_CP116214.1 GeneMarkS-2+ CDS 2749145 2749759 . + 0 ID=cds-WP_119834601.1;Parent=gene-PHA56_RS13220;Dbxref=Genbank:WP_119834601.1;Name=WP_119834601.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PHA56_RS13220;product=hypothetical protein;protein_id=WP_119834601.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2749964 2750140 . - . ID=gene-PHA56_RS13225;Name=PHA56_RS13225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13225;old_locus_tag=PHA56_13230 NZ_CP116214.1 Protein Homology CDS 2749964 2750140 . - 0 ID=cds-WP_046876471.1;Parent=gene-PHA56_RS13225;Dbxref=Genbank:WP_046876471.1;Name=WP_046876471.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004146378.1;locus_tag=PHA56_RS13225;product=hypothetical protein;protein_id=WP_046876471.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2750252 2750725 . + . ID=gene-PHA56_RS13230;Name=PHA56_RS13230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13230;old_locus_tag=PHA56_13235 NZ_CP116214.1 Protein Homology CDS 2750252 2750725 . + 0 ID=cds-WP_119834644.1;Parent=gene-PHA56_RS13230;Dbxref=Genbank:WP_119834644.1;Name=WP_119834644.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004146185.1;locus_tag=PHA56_RS13230;product=hypothetical protein;protein_id=WP_119834644.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2750712 2751194 . + . ID=gene-PHA56_RS13235;Name=PHA56_RS13235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13235;old_locus_tag=PHA56_13240 NZ_CP116214.1 Protein Homology CDS 2750712 2751194 . + 0 ID=cds-WP_271292975.1;Parent=gene-PHA56_RS13235;Dbxref=Genbank:WP_271292975.1;Name=WP_271292975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004152650.1;locus_tag=PHA56_RS13235;product=DUF1833 family protein;protein_id=WP_271292975.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2751204 2751584 . + . ID=gene-PHA56_RS13240;Name=PHA56_RS13240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13240;old_locus_tag=PHA56_13245 NZ_CP116214.1 Protein Homology CDS 2751204 2751584 . + 0 ID=cds-WP_119834599.1;Parent=gene-PHA56_RS13240;Dbxref=Genbank:WP_119834599.1;Name=WP_119834599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016160832.1;locus_tag=PHA56_RS13240;product=nitrite transporter;protein_id=WP_119834599.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2751581 2754643 . + . ID=gene-PHA56_RS13245;Name=PHA56_RS13245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13245;old_locus_tag=PHA56_13250 NZ_CP116214.1 Protein Homology CDS 2751581 2754643 . + 0 ID=cds-WP_119834598.1;Parent=gene-PHA56_RS13245;Dbxref=Genbank:WP_119834598.1;Name=WP_119834598.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004146182.1;locus_tag=PHA56_RS13245;product=host specificity factor TipJ family phage tail protein;protein_id=WP_119834598.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2754720 2757896 . + . ID=gene-PHA56_RS13250;Name=PHA56_RS13250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13250;old_locus_tag=PHA56_13255 NZ_CP116214.1 Protein Homology CDS 2754720 2757896 . + 0 ID=cds-WP_224379439.1;Parent=gene-PHA56_RS13250;Dbxref=Genbank:WP_224379439.1;Name=WP_224379439.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004184426.1;locus_tag=PHA56_RS13250;product=hypothetical protein;protein_id=WP_224379439.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2757955 2758701 . - . ID=gene-PHA56_RS13255;Name=PHA56_RS13255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13255;old_locus_tag=PHA56_13260 NZ_CP116214.1 GeneMarkS-2+ CDS 2757955 2758701 . - 0 ID=cds-WP_119834754.1;Parent=gene-PHA56_RS13255;Dbxref=Genbank:WP_119834754.1;Name=WP_119834754.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PHA56_RS13255;product=hypothetical protein;protein_id=WP_119834754.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2758704 2760437 . - . ID=gene-PHA56_RS13260;Name=PHA56_RS13260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13260;old_locus_tag=PHA56_13265 NZ_CP116214.1 Protein Homology CDS 2758704 2760437 . - 0 ID=cds-WP_119834755.1;Parent=gene-PHA56_RS13260;Dbxref=Genbank:WP_119834755.1;Name=WP_119834755.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004184423.1;locus_tag=PHA56_RS13260;product=GDSL-type esterase/lipase family protein;protein_id=WP_119834755.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2760529 2761077 . + . ID=gene-PHA56_RS13265;Name=PHA56_RS13265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13265;old_locus_tag=PHA56_13270 NZ_CP116214.1 Protein Homology CDS 2760529 2761077 . + 0 ID=cds-WP_098362846.1;Parent=gene-PHA56_RS13265;Dbxref=Genbank:WP_098362846.1;Name=WP_098362846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019705524.1;locus_tag=PHA56_RS13265;product=recombinase family protein;protein_id=WP_098362846.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2761930 2764104 . + . ID=gene-PHA56_RS13270;Name=PHA56_RS13270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13270;old_locus_tag=PHA56_13275 NZ_CP116214.1 Protein Homology CDS 2761930 2764104 . + 0 ID=cds-WP_048263343.1;Parent=gene-PHA56_RS13270;Dbxref=Genbank:WP_048263343.1;Name=WP_048263343.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008110203.1;locus_tag=PHA56_RS13270;product=TonB-dependent siderophore receptor;protein_id=WP_048263343.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2764356 2765531 . - . ID=gene-PHA56_RS13275;Name=PHA56_RS13275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13275;old_locus_tag=PHA56_13280 NZ_CP116214.1 Protein Homology CDS 2764356 2765531 . - 0 ID=cds-WP_046876481.1;Parent=gene-PHA56_RS13275;Dbxref=Genbank:WP_046876481.1;Name=WP_046876481.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004184418.1;locus_tag=PHA56_RS13275;product=diguanylate phosphodiesterase;protein_id=WP_046876481.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2766306 2766752 . + . ID=gene-PHA56_RS13280;Name=PHA56_RS13280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13280;old_locus_tag=PHA56_13285 NZ_CP116214.1 Protein Homology CDS 2766306 2766752 . + 0 ID=cds-WP_046876483.1;Parent=gene-PHA56_RS13280;Dbxref=Genbank:WP_046876483.1;Name=WP_046876483.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020078826.1;locus_tag=PHA56_RS13280;product=DUF3290 domain-containing protein;protein_id=WP_046876483.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2766762 2767397 . + . ID=gene-PHA56_RS13285;Name=PHA56_RS13285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13285;old_locus_tag=PHA56_13290 NZ_CP116214.1 Protein Homology CDS 2766762 2767397 . + 0 ID=cds-WP_040199603.1;Parent=gene-PHA56_RS13285;Dbxref=Genbank:WP_040199603.1;Name=WP_040199603.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004102429.1;locus_tag=PHA56_RS13285;product=DUF421 domain-containing protein;protein_id=WP_040199603.1;transl_table=11 NZ_CP116214.1 RefSeq pseudogene 2767625 2767750 . - . ID=gene-PHA56_RS13290;Name=PHA56_RS13290;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS13290;old_locus_tag=PHA56_13295;partial=true;pseudo=true;start_range=.,2767625 NZ_CP116214.1 Protein Homology CDS 2767625 2767750 . - 0 ID=cds-PHA56_RS13290;Parent=gene-PHA56_RS13290;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226805.1;locus_tag=PHA56_RS13290;partial=true;product=SOS response-associated peptidase;pseudo=true;start_range=.,2767625;transl_table=11 NZ_CP116214.1 RefSeq pseudogene 2768028 2768273 . + . ID=gene-PHA56_RS13295;Name=PHA56_RS13295;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS13295;old_locus_tag=PHA56_13300;partial=true;pseudo=true;start_range=.,2768028 NZ_CP116214.1 Protein Homology CDS 2768028 2768273 . + 0 ID=cds-PHA56_RS13295;Parent=gene-PHA56_RS13295;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226803.1;locus_tag=PHA56_RS13295;partial=true;product=M3 family metallopeptidase;pseudo=true;start_range=.,2768028;transl_table=11 NZ_CP116214.1 RefSeq gene 2768763 2769392 . - . ID=gene-PHA56_RS13300;Name=PHA56_RS13300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13300;old_locus_tag=PHA56_13305 NZ_CP116214.1 Protein Homology CDS 2768763 2769392 . - 0 ID=cds-WP_032719188.1;Parent=gene-PHA56_RS13300;Dbxref=Genbank:WP_032719188.1;Name=WP_032719188.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229519.1;locus_tag=PHA56_RS13300;product=helix-turn-helix transcriptional regulator;protein_id=WP_032719188.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2769779 2770078 . + . ID=gene-PHA56_RS13305;Name=PHA56_RS13305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13305;old_locus_tag=PHA56_13310 NZ_CP116214.1 GeneMarkS-2+ CDS 2769779 2770078 . + 0 ID=cds-WP_142395694.1;Parent=gene-PHA56_RS13305;Dbxref=Genbank:WP_142395694.1;Name=WP_142395694.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PHA56_RS13305;product=hypothetical protein;protein_id=WP_142395694.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2769971 2770231 . - . ID=gene-PHA56_RS13310;Name=PHA56_RS13310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13310;old_locus_tag=PHA56_13315 NZ_CP116214.1 Protein Homology CDS 2769971 2770231 . - 0 ID=cds-WP_038424567.1;Parent=gene-PHA56_RS13310;Dbxref=Genbank:WP_038424567.1;Name=WP_038424567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229518.1;locus_tag=PHA56_RS13310;product=hypothetical protein;protein_id=WP_038424567.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2770697 2771317 . - . ID=gene-PHA56_RS13315;Name=PHA56_RS13315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13315;old_locus_tag=PHA56_13320 NZ_CP116214.1 Protein Homology CDS 2770697 2771317 . - 0 ID=cds-WP_014229517.1;Parent=gene-PHA56_RS13315;Dbxref=Genbank:WP_014229517.1;Name=WP_014229517.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229517.1;locus_tag=PHA56_RS13315;product=hypothetical protein;protein_id=WP_014229517.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2771891 2772367 . - . ID=gene-PHA56_RS13320;Name=PHA56_RS13320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13320;old_locus_tag=PHA56_13325 NZ_CP116214.1 Protein Homology CDS 2771891 2772367 . - 0 ID=cds-WP_038424566.1;Parent=gene-PHA56_RS13320;Dbxref=Genbank:WP_038424566.1;Name=WP_038424566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003021353.1;locus_tag=PHA56_RS13320;product=cold shock domain-containing protein;protein_id=WP_038424566.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2772482 2773021 . - . ID=gene-PHA56_RS13325;Name=PHA56_RS13325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13325;old_locus_tag=PHA56_13330 NZ_CP116214.1 Protein Homology CDS 2772482 2773021 . - 0 ID=cds-WP_014229516.1;Parent=gene-PHA56_RS13325;Dbxref=Genbank:WP_014229516.1;Name=WP_014229516.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414888.4;locus_tag=PHA56_RS13325;product=DUF2058 domain-containing protein;protein_id=WP_014229516.1;transl_table=11 NZ_CP116214.1 RefSeq pseudogene 2773184 2773494 . + . ID=gene-PHA56_RS13330;Name=PHA56_RS13330;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS13330;old_locus_tag=PHA56_13335;pseudo=true NZ_CP116214.1 Protein Homology CDS 2773184 2773494 . + 0 ID=cds-PHA56_RS13330;Parent=gene-PHA56_RS13330;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009654705.1;locus_tag=PHA56_RS13330;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP116214.1 RefSeq gene 2773557 2773829 . - . ID=gene-PHA56_RS13335;Name=PHA56_RS13335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13335;old_locus_tag=PHA56_13340 NZ_CP116214.1 Protein Homology CDS 2773557 2773829 . - 0 ID=cds-WP_051800677.1;Parent=gene-PHA56_RS13335;Dbxref=Genbank:WP_051800677.1;Name=WP_051800677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004102398.1;locus_tag=PHA56_RS13335;product=CsbD family protein;protein_id=WP_051800677.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2774213 2774467 . + . ID=gene-PHA56_RS13340;Name=PHA56_RS13340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13340;old_locus_tag=PHA56_13345 NZ_CP116214.1 Protein Homology CDS 2774213 2774467 . + 0 ID=cds-WP_032694471.1;Parent=gene-PHA56_RS13340;Dbxref=Genbank:WP_032694471.1;Name=WP_032694471.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229514.1;locus_tag=PHA56_RS13340;product=hypothetical protein;protein_id=WP_032694471.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2774496 2774756 . + . ID=gene-PHA56_RS13345;Name=PHA56_RS13345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13345;old_locus_tag=PHA56_13350 NZ_CP116214.1 Protein Homology CDS 2774496 2774756 . + 0 ID=cds-WP_014229513.1;Parent=gene-PHA56_RS13345;Dbxref=Genbank:WP_014229513.1;Name=WP_014229513.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004136273.1;locus_tag=PHA56_RS13345;product=hypothetical protein;protein_id=WP_014229513.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2774859 2775947 . + . ID=gene-PHA56_RS13350;Name=PHA56_RS13350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13350;old_locus_tag=PHA56_13355 NZ_CP116214.1 Protein Homology CDS 2774859 2775947 . + 0 ID=cds-WP_014838607.1;Parent=gene-PHA56_RS13350;Dbxref=Genbank:WP_014838607.1;Name=WP_014838607.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229512.1;locus_tag=PHA56_RS13350;product=AAA family ATPase;protein_id=WP_014838607.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2776021 2777271 . - . ID=gene-PHA56_RS13355;Name=PHA56_RS13355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13355;old_locus_tag=PHA56_13360 NZ_CP116214.1 Protein Homology CDS 2776021 2777271 . - 0 ID=cds-WP_025105768.1;Parent=gene-PHA56_RS13355;Dbxref=Genbank:WP_025105768.1;Name=WP_025105768.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004119781.1;locus_tag=PHA56_RS13355;product=MFS transporter;protein_id=WP_025105768.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2777327 2780434 . - . ID=gene-PHA56_RS13360;Name=PHA56_RS13360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13360;old_locus_tag=PHA56_13365 NZ_CP116214.1 Protein Homology CDS 2777327 2780434 . - 0 ID=cds-WP_076752600.1;Parent=gene-PHA56_RS13360;Dbxref=Genbank:WP_076752600.1;Name=WP_076752600.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004136279.1;locus_tag=PHA56_RS13360;product=beta-galactosidase;protein_id=WP_076752600.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2780642 2781712 . + . ID=gene-PHA56_RS13365;Name=PHA56_RS13365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13365;old_locus_tag=PHA56_13370 NZ_CP116214.1 Protein Homology CDS 2780642 2781712 . + 0 ID=cds-WP_038424564.1;Parent=gene-PHA56_RS13365;Dbxref=Genbank:WP_038424564.1;Name=WP_038424564.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226829.1;locus_tag=PHA56_RS13365;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_038424564.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2782097 2782531 . + . ID=gene-PHA56_RS13370;Name=PHA56_RS13370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13370;old_locus_tag=PHA56_13375 NZ_CP116214.1 Protein Homology CDS 2782097 2782531 . + 0 ID=cds-WP_025105765.1;Parent=gene-PHA56_RS13370;Dbxref=Genbank:WP_025105765.1;Name=WP_025105765.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004119786.1;locus_tag=PHA56_RS13370;product=GNAT family N-acetyltransferase;protein_id=WP_025105765.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2782769 2783977 . + . ID=gene-PHA56_RS13375;Name=PHA56_RS13375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13375;old_locus_tag=PHA56_13380 NZ_CP116214.1 Protein Homology CDS 2782769 2783977 . + 0 ID=cds-WP_038424563.1;Parent=gene-PHA56_RS13375;Dbxref=Genbank:WP_038424563.1;Name=WP_038424563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229505.1;locus_tag=PHA56_RS13375;product=diguanylate phosphodiesterase;protein_id=WP_038424563.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2784166 2784477 . - . ID=gene-PHA56_RS13380;Name=iraP;gbkey=Gene;gene=iraP;gene_biotype=protein_coding;locus_tag=PHA56_RS13380;old_locus_tag=PHA56_13385 NZ_CP116214.1 Protein Homology CDS 2784166 2784477 . - 0 ID=cds-WP_004851215.1;Parent=gene-PHA56_RS13380;Dbxref=Genbank:WP_004851215.1;Name=WP_004851215.1;gbkey=CDS;gene=iraP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004851215.1;locus_tag=PHA56_RS13380;product=anti-adapter protein IraP;protein_id=WP_004851215.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2784605 2784868 . - . ID=gene-PHA56_RS13385;Name=PHA56_RS13385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13385;old_locus_tag=PHA56_13390 NZ_CP116214.1 GeneMarkS-2+ CDS 2784605 2784868 . - 0 ID=cds-WP_038424562.1;Parent=gene-PHA56_RS13385;Dbxref=Genbank:WP_038424562.1;Name=WP_038424562.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PHA56_RS13385;product=hypothetical protein;protein_id=WP_038424562.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2785068 2786045 . + . ID=gene-PHA56_RS13390;Name=PHA56_RS13390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13390;old_locus_tag=PHA56_13395 NZ_CP116214.1 Protein Homology CDS 2785068 2786045 . + 0 ID=cds-WP_014229504.1;Parent=gene-PHA56_RS13390;Dbxref=Genbank:WP_014229504.1;Name=WP_014229504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009654753.1;locus_tag=PHA56_RS13390;product=DUF1852 domain-containing protein;protein_id=WP_014229504.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2786073 2787104 . + . ID=gene-PHA56_RS13395;Name=PHA56_RS13395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13395;old_locus_tag=PHA56_13400 NZ_CP116214.1 Protein Homology CDS 2786073 2787104 . + 0 ID=cds-WP_032694476.1;Parent=gene-PHA56_RS13395;Dbxref=Genbank:WP_032694476.1;Name=WP_032694476.1;Ontology_term=GO:0009086,GO:0003871,GO:0008270;gbkey=CDS;go_function=5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity|0003871||IEA,zinc ion binding|0008270||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227444.1;locus_tag=PHA56_RS13395;product=methionine synthase;protein_id=WP_032694476.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2787238 2787516 . - . ID=gene-PHA56_RS13400;Name=PHA56_RS13400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13400;old_locus_tag=PHA56_13405 NZ_CP116214.1 Protein Homology CDS 2787238 2787516 . - 0 ID=cds-WP_014229502.1;Parent=gene-PHA56_RS13400;Dbxref=Genbank:WP_014229502.1;Name=WP_014229502.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229502.1;locus_tag=PHA56_RS13400;product=hypothetical protein;protein_id=WP_014229502.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2787735 2787830 . - . ID=gene-PHA56_RS13405;Name=mgtS;gbkey=Gene;gene=mgtS;gene_biotype=protein_coding;locus_tag=PHA56_RS13405;old_locus_tag=PHA56_13410 NZ_CP116214.1 Protein Homology CDS 2787735 2787830 . - 0 ID=cds-WP_004102377.1;Parent=gene-PHA56_RS13405;Dbxref=Genbank:WP_004102377.1;Name=WP_004102377.1;gbkey=CDS;gene=mgtS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165319.1;locus_tag=PHA56_RS13405;product=protein MgtS;protein_id=WP_004102377.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2787966 2788976 . - . ID=gene-PHA56_RS13410;Name=ftrA;gbkey=Gene;gene=ftrA;gene_biotype=protein_coding;locus_tag=PHA56_RS13410;old_locus_tag=PHA56_13415 NZ_CP116214.1 Protein Homology CDS 2787966 2788976 . - 0 ID=cds-WP_038424561.1;Parent=gene-PHA56_RS13410;Dbxref=Genbank:WP_038424561.1;Name=WP_038424561.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=ftrA;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229501.1;locus_tag=PHA56_RS13410;product=transcriptional regulator FtrA;protein_id=WP_038424561.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2789044 2789436 . + . ID=gene-PHA56_RS13415;Name=PHA56_RS13415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13415;old_locus_tag=PHA56_13420 NZ_CP116214.1 Protein Homology CDS 2789044 2789436 . + 0 ID=cds-WP_038424560.1;Parent=gene-PHA56_RS13415;Dbxref=Genbank:WP_038424560.1;Name=WP_038424560.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004136302.1;locus_tag=PHA56_RS13415;product=rhodanese-like domain-containing protein;protein_id=WP_038424560.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2789586 2790689 . + . ID=gene-PHA56_RS13420;Name=PHA56_RS13420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13420;old_locus_tag=PHA56_13425 NZ_CP116214.1 Protein Homology CDS 2789586 2790689 . + 0 ID=cds-WP_014229500.1;Parent=gene-PHA56_RS13420;Dbxref=Genbank:WP_014229500.1;Name=WP_014229500.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226837.1;locus_tag=PHA56_RS13420;product=cobalamin-independent methionine synthase II family protein;protein_id=WP_014229500.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2790867 2792138 . + . ID=gene-PHA56_RS13425;Name=urtA;gbkey=Gene;gene=urtA;gene_biotype=protein_coding;locus_tag=PHA56_RS13425;old_locus_tag=PHA56_13430 NZ_CP116214.1 Protein Homology CDS 2790867 2792138 . + 0 ID=cds-WP_014229499.1;Parent=gene-PHA56_RS13425;Dbxref=Genbank:WP_014229499.1;Name=WP_014229499.1;Ontology_term=GO:0015840,GO:0033219,GO:0033221,GO:0030288,GO:0055052;gbkey=CDS;gene=urtA;go_component=outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=urea binding|0033219||IEA,ATPase-coupled urea transmembrane transporter activity|0033221||IEA;go_process=urea transport|0015840||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007900121.1;locus_tag=PHA56_RS13425;product=urea ABC transporter substrate-binding protein;protein_id=WP_014229499.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2792223 2793797 . + . ID=gene-PHA56_RS13430;Name=urtB;gbkey=Gene;gene=urtB;gene_biotype=protein_coding;locus_tag=PHA56_RS13430;old_locus_tag=PHA56_13435 NZ_CP116214.1 Protein Homology CDS 2792223 2793797 . + 0 ID=cds-WP_014229498.1;Parent=gene-PHA56_RS13430;Dbxref=Genbank:WP_014229498.1;Name=WP_014229498.1;Ontology_term=GO:0015840,GO:0033221,GO:0005886,GO:0055052;gbkey=CDS;gene=urtB;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled urea transmembrane transporter activity|0033221||IEA;go_process=urea transport|0015840||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226839.1;locus_tag=PHA56_RS13430;product=urea ABC transporter permease subunit UrtB;protein_id=WP_014229498.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2793797 2794870 . + . ID=gene-PHA56_RS13435;Name=urtC;gbkey=Gene;gene=urtC;gene_biotype=protein_coding;locus_tag=PHA56_RS13435;old_locus_tag=PHA56_13440 NZ_CP116214.1 Protein Homology CDS 2793797 2794870 . + 0 ID=cds-WP_014229497.1;Parent=gene-PHA56_RS13435;Dbxref=Genbank:WP_014229497.1;Name=WP_014229497.1;Ontology_term=GO:0015840,GO:0033221,GO:0005886,GO:0055052;gbkey=CDS;gene=urtC;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled urea transmembrane transporter activity|0033221||IEA;go_process=urea transport|0015840||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226840.1;locus_tag=PHA56_RS13435;product=urea ABC transporter permease subunit UrtC;protein_id=WP_014229497.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2794870 2795667 . + . ID=gene-PHA56_RS13440;Name=urtD;gbkey=Gene;gene=urtD;gene_biotype=protein_coding;locus_tag=PHA56_RS13440;old_locus_tag=PHA56_13445 NZ_CP116214.1 Protein Homology CDS 2794870 2795667 . + 0 ID=cds-WP_014229496.1;Parent=gene-PHA56_RS13440;Dbxref=Genbank:WP_014229496.1;Name=WP_014229496.1;Ontology_term=GO:0015840,GO:0005524,GO:0033221,GO:0009898,GO:0055052;gbkey=CDS;gene=urtD;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled urea transmembrane transporter activity|0033221||IEA;go_process=urea transport|0015840||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226841.1;locus_tag=PHA56_RS13440;product=urea ABC transporter ATP-binding protein UrtD;protein_id=WP_014229496.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2795677 2796375 . + . ID=gene-PHA56_RS13445;Name=urtE;gbkey=Gene;gene=urtE;gene_biotype=protein_coding;locus_tag=PHA56_RS13445;old_locus_tag=PHA56_13450 NZ_CP116214.1 Protein Homology CDS 2795677 2796375 . + 0 ID=cds-WP_014229495.1;Parent=gene-PHA56_RS13445;Dbxref=Genbank:WP_014229495.1;Name=WP_014229495.1;Ontology_term=GO:0015840,GO:0005524,GO:0033221,GO:0009898,GO:0055052;gbkey=CDS;gene=urtE;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled urea transmembrane transporter activity|0033221||IEA;go_process=urea transport|0015840||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226842.1;locus_tag=PHA56_RS13445;product=urea ABC transporter ATP-binding subunit UrtE;protein_id=WP_014229495.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2797241 2797711 . - . ID=gene-PHA56_RS13450;Name=PHA56_RS13450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13450;old_locus_tag=PHA56_13455 NZ_CP116214.1 Protein Homology CDS 2797241 2797711 . - 0 ID=cds-WP_009654748.1;Parent=gene-PHA56_RS13450;Dbxref=Genbank:WP_009654748.1;Name=WP_009654748.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226843.1;locus_tag=PHA56_RS13450;product=helix-turn-helix domain-containing protein;protein_id=WP_009654748.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2797829 2799022 . - . ID=gene-PHA56_RS13455;Name=ydeE;gbkey=Gene;gene=ydeE;gene_biotype=protein_coding;locus_tag=PHA56_RS13455;old_locus_tag=PHA56_13460 NZ_CP116214.1 Protein Homology CDS 2797829 2799022 . - 0 ID=cds-WP_014229494.1;Parent=gene-PHA56_RS13455;Dbxref=Genbank:WP_014229494.1;Name=WP_014229494.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=ydeE;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014838593.1;locus_tag=PHA56_RS13455;product=efflux MFS transporter YdeE;protein_id=WP_014229494.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2799215 2800114 . + . ID=gene-PHA56_RS13460;Name=eamA;gbkey=Gene;gene=eamA;gene_biotype=protein_coding;locus_tag=PHA56_RS13460;old_locus_tag=PHA56_13465 NZ_CP116214.1 Protein Homology CDS 2799215 2800114 . + 0 ID=cds-WP_014229493.1;Parent=gene-PHA56_RS13460;Dbxref=Genbank:WP_014229493.1;Name=WP_014229493.1;Ontology_term=GO:0016020;gbkey=CDS;gene=eamA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226845.1;locus_tag=PHA56_RS13460;product=O-acetylserine/cysteine exporter;protein_id=WP_014229493.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2800147 2800365 . - . ID=gene-PHA56_RS13465;Name=marB;gbkey=Gene;gene=marB;gene_biotype=protein_coding;locus_tag=PHA56_RS13465;old_locus_tag=PHA56_13470 NZ_CP116214.1 Protein Homology CDS 2800147 2800365 . - 0 ID=cds-WP_004851184.1;Parent=gene-PHA56_RS13465;Dbxref=Genbank:WP_004851184.1;Name=WP_004851184.1;gbkey=CDS;gene=marB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226846.1;locus_tag=PHA56_RS13465;product=multiple antibiotic resistance protein MarB;protein_id=WP_004851184.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2800396 2800776 . - . ID=gene-PHA56_RS13470;Name=marA;gbkey=Gene;gene=marA;gene_biotype=protein_coding;locus_tag=PHA56_RS13470;old_locus_tag=PHA56_13475 NZ_CP116214.1 Protein Homology CDS 2800396 2800776 . - 0 ID=cds-WP_004102351.1;Parent=gene-PHA56_RS13470;Dbxref=Genbank:WP_004102351.1;Name=WP_004102351.1;gbkey=CDS;gene=marA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004205971.1;locus_tag=PHA56_RS13470;product=MDR efflux pump AcrAB transcriptional activator MarA;protein_id=WP_004102351.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2800794 2801228 . - . ID=gene-PHA56_RS13475;Name=marR;gbkey=Gene;gene=marR;gene_biotype=protein_coding;locus_tag=PHA56_RS13475;old_locus_tag=PHA56_13480 NZ_CP116214.1 Protein Homology CDS 2800794 2801228 . - 0 ID=cds-WP_271292976.1;Parent=gene-PHA56_RS13475;Dbxref=Genbank:WP_271292976.1;Name=WP_271292976.1;gbkey=CDS;gene=marR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004102349.1;locus_tag=PHA56_RS13475;product=multiple antibiotic resistance transcriptional regulator MarR;protein_id=WP_271292976.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2801490 2802158 . + . ID=gene-PHA56_RS13480;Name=PHA56_RS13480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13480;old_locus_tag=PHA56_13485 NZ_CP116214.1 Protein Homology CDS 2801490 2802158 . + 0 ID=cds-WP_004119839.1;Parent=gene-PHA56_RS13480;Dbxref=Genbank:WP_004119839.1;Name=WP_004119839.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004851177.1;locus_tag=PHA56_RS13480;product=MarC family NAAT transporter;protein_id=WP_004119839.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2802234 2803433 . - . ID=gene-PHA56_RS13485;Name=PHA56_RS13485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13485;old_locus_tag=PHA56_13490 NZ_CP116214.1 Protein Homology CDS 2802234 2803433 . - 0 ID=cds-WP_025105754.1;Parent=gene-PHA56_RS13485;Dbxref=Genbank:WP_025105754.1;Name=WP_025105754.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004205967.1;locus_tag=PHA56_RS13485;product=sugar transporter;protein_id=WP_025105754.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2803639 2804430 . + . ID=gene-PHA56_RS13490;Name=PHA56_RS13490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13490;old_locus_tag=PHA56_13495 NZ_CP116214.1 Protein Homology CDS 2803639 2804430 . + 0 ID=cds-WP_014229491.1;Parent=gene-PHA56_RS13490;Dbxref=Genbank:WP_014229491.1;Name=WP_014229491.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226852.1;locus_tag=PHA56_RS13490;product=PhzF family phenazine biosynthesis protein;protein_id=WP_014229491.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2804440 2805228 . + . ID=gene-PHA56_RS13495;Name=PHA56_RS13495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13495;old_locus_tag=PHA56_13500 NZ_CP116214.1 Protein Homology CDS 2804440 2805228 . + 0 ID=cds-WP_119834556.1;Parent=gene-PHA56_RS13495;Dbxref=Genbank:WP_119834556.1;Name=WP_119834556.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004851172.1;locus_tag=PHA56_RS13495;product=PhzF family phenazine biosynthesis protein;protein_id=WP_119834556.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2805348 2806292 . - . ID=gene-PHA56_RS13500;Name=PHA56_RS13500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13500;old_locus_tag=PHA56_13505 NZ_CP116214.1 Protein Homology CDS 2805348 2806292 . - 0 ID=cds-WP_014229489.1;Parent=gene-PHA56_RS13500;Dbxref=Genbank:WP_014229489.1;Name=WP_014229489.1;Ontology_term=GO:0006096,GO:0004459,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=L-lactate dehydrogenase activity|0004459||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226862.1;locus_tag=PHA56_RS13500;product=L-lactate dehydrogenase;protein_id=WP_014229489.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2806438 2806920 . + . ID=gene-PHA56_RS13505;Name=PHA56_RS13505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13505;old_locus_tag=PHA56_13510 NZ_CP116214.1 Protein Homology CDS 2806438 2806920 . + 0 ID=cds-WP_038424558.1;Parent=gene-PHA56_RS13505;Dbxref=Genbank:WP_038424558.1;Name=WP_038424558.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229488.1;locus_tag=PHA56_RS13505;product=GNAT family N-acetyltransferase;protein_id=WP_038424558.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2806874 2807752 . - . ID=gene-PHA56_RS13510;Name=PHA56_RS13510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13510;old_locus_tag=PHA56_13515 NZ_CP116214.1 Protein Homology CDS 2806874 2807752 . - 0 ID=cds-WP_004851166.1;Parent=gene-PHA56_RS13510;Dbxref=Genbank:WP_004851166.1;Name=WP_004851166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226864.1;locus_tag=PHA56_RS13510;product=LysR family transcriptional regulator;protein_id=WP_004851166.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2807858 2809243 . + . ID=gene-PHA56_RS13515;Name=sad;gbkey=Gene;gene=sad;gene_biotype=protein_coding;locus_tag=PHA56_RS13515;old_locus_tag=PHA56_13520 NZ_CP116214.1 Protein Homology CDS 2807858 2809243 . + 0 ID=cds-WP_038424557.1;Parent=gene-PHA56_RS13515;Dbxref=Genbank:WP_038424557.1;Name=WP_038424557.1;Ontology_term=GO:0004030;gbkey=CDS;gene=sad;go_function=aldehyde dehydrogenase [NAD(P)+] activity|0004030||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004198836.1;locus_tag=PHA56_RS13515;product=succinate-semialdehyde dehydrogenase;protein_id=WP_038424557.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2809450 2810376 . + . ID=gene-PHA56_RS13520;Name=glsB;gbkey=Gene;gene=glsB;gene_biotype=protein_coding;locus_tag=PHA56_RS13520;old_locus_tag=PHA56_13525 NZ_CP116214.1 Protein Homology CDS 2809450 2810376 . + 0 ID=cds-WP_014229486.1;Parent=gene-PHA56_RS13520;Dbxref=Genbank:WP_014229486.1;Name=WP_014229486.1;Ontology_term=GO:0006541,GO:0004359;gbkey=CDS;gene=glsB;go_function=glutaminase activity|0004359||IEA;go_process=glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226866.1;locus_tag=PHA56_RS13520;product=glutaminase B;protein_id=WP_014229486.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2810376 2810750 . + . ID=gene-PHA56_RS13525;Name=PHA56_RS13525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13525;old_locus_tag=PHA56_13530 NZ_CP116214.1 Protein Homology CDS 2810376 2810750 . + 0 ID=cds-WP_032694369.1;Parent=gene-PHA56_RS13525;Dbxref=Genbank:WP_032694369.1;Name=WP_032694369.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014838577.1;locus_tag=PHA56_RS13525;product=DUF4186 domain-containing protein;protein_id=WP_032694369.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2810858 2812270 . + . ID=gene-PHA56_RS13530;Name=PHA56_RS13530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13530;old_locus_tag=PHA56_13535 NZ_CP116214.1 Protein Homology CDS 2810858 2812270 . + 0 ID=cds-WP_032694368.1;Parent=gene-PHA56_RS13530;Dbxref=Genbank:WP_032694368.1;Name=WP_032694368.1;Ontology_term=GO:0009966,GO:0009975;gbkey=CDS;go_function=cyclase activity|0009975||IEA;go_process=regulation of signal transduction|0009966||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229484.1;locus_tag=PHA56_RS13530;product=GGDEF domain-containing protein;protein_id=WP_032694368.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2812360 2812890 . + . ID=gene-PHA56_RS13535;Name=PHA56_RS13535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13535;old_locus_tag=PHA56_13540 NZ_CP116214.1 Protein Homology CDS 2812360 2812890 . + 0 ID=cds-WP_004851153.1;Parent=gene-PHA56_RS13535;Dbxref=Genbank:WP_004851153.1;Name=WP_004851153.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004851153.1;locus_tag=PHA56_RS13535;product=GNAT family N-acetyltransferase;protein_id=WP_004851153.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2813002 2814453 . + . ID=gene-PHA56_RS13540;Name=PHA56_RS13540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13540;old_locus_tag=PHA56_13545 NZ_CP116214.1 Protein Homology CDS 2813002 2814453 . + 0 ID=cds-WP_038424556.1;Parent=gene-PHA56_RS13540;Dbxref=Genbank:WP_038424556.1;Name=WP_038424556.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310155.1;locus_tag=PHA56_RS13540;product=tagaturonate reductase;protein_id=WP_038424556.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2814783 2815223 . + . ID=gene-PHA56_RS13545;Name=PHA56_RS13545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13545;old_locus_tag=PHA56_13550 NZ_CP116214.1 Protein Homology CDS 2814783 2815223 . + 0 ID=cds-WP_038424555.1;Parent=gene-PHA56_RS13545;Dbxref=Genbank:WP_038424555.1;Name=WP_038424555.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004851148.1;locus_tag=PHA56_RS13545;product=GNAT family N-acetyltransferase;protein_id=WP_038424555.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2815457 2816209 . - . ID=gene-PHA56_RS13550;Name=tam;gbkey=Gene;gene=tam;gene_biotype=protein_coding;locus_tag=PHA56_RS13550;old_locus_tag=PHA56_13555 NZ_CP116214.1 Protein Homology CDS 2815457 2816209 . - 0 ID=cds-WP_038424554.1;Parent=gene-PHA56_RS13550;Dbxref=Genbank:WP_038424554.1;Name=WP_038424554.1;Ontology_term=GO:0030798;gbkey=CDS;gene=tam;go_function=trans-aconitate 2-methyltransferase activity|0030798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004102301.1;locus_tag=PHA56_RS13550;product=trans-aconitate 2-methyltransferase;protein_id=WP_038424554.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2816394 2817194 . + . ID=gene-PHA56_RS13555;Name=PHA56_RS13555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13555;old_locus_tag=PHA56_13560 NZ_CP116214.1 Protein Homology CDS 2816394 2817194 . + 0 ID=cds-WP_032694364.1;Parent=gene-PHA56_RS13555;Dbxref=Genbank:WP_032694364.1;Name=WP_032694364.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229480.1;locus_tag=PHA56_RS13555;product=MBL fold metallo-hydrolase;protein_id=WP_032694364.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2817435 2817854 . + . ID=gene-PHA56_RS13560;Name=PHA56_RS13560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13560;old_locus_tag=PHA56_13565 NZ_CP116214.1 Protein Homology CDS 2817435 2817854 . + 0 ID=cds-WP_004851141.1;Parent=gene-PHA56_RS13560;Dbxref=Genbank:WP_004851141.1;Name=WP_004851141.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017145811.1;locus_tag=PHA56_RS13560;product=hypothetical protein;protein_id=WP_004851141.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2817927 2818295 . + . ID=gene-PHA56_RS13565;Name=PHA56_RS13565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13565;old_locus_tag=PHA56_13570 NZ_CP116214.1 Protein Homology CDS 2817927 2818295 . + 0 ID=cds-WP_032694362.1;Parent=gene-PHA56_RS13565;Dbxref=Genbank:WP_032694362.1;Name=WP_032694362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004851138.1;locus_tag=PHA56_RS13565;product=copper-binding protein;protein_id=WP_032694362.1;transl_table=11 NZ_CP116214.1 RefSeq pseudogene 2818309 2819556 . + . ID=gene-PHA56_RS13570;Name=PHA56_RS13570;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS13570;old_locus_tag=PHA56_13575;pseudo=true NZ_CP116214.1 Protein Homology CDS 2818309 2819556 . + 0 ID=cds-PHA56_RS13570;Parent=gene-PHA56_RS13570;Note=internal stop;Ontology_term=GO:0055085,GO:0015562;gbkey=CDS;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014838571.1;locus_tag=PHA56_RS13570;product=TolC family protein;pseudo=true;transl_table=11 NZ_CP116214.1 RefSeq gene 2819556 2821025 . + . ID=gene-PHA56_RS13575;Name=PHA56_RS13575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13575;old_locus_tag=PHA56_13580 NZ_CP116214.1 Protein Homology CDS 2819556 2821025 . + 0 ID=cds-WP_119834555.1;Parent=gene-PHA56_RS13575;Dbxref=Genbank:WP_119834555.1;Name=WP_119834555.1;Ontology_term=GO:0006810,GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004851132.1;locus_tag=PHA56_RS13575;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_119834555.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2821022 2824135 . + . ID=gene-PHA56_RS13580;Name=PHA56_RS13580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13580;old_locus_tag=PHA56_13585 NZ_CP116214.1 Protein Homology CDS 2821022 2824135 . + 0 ID=cds-WP_119834554.1;Parent=gene-PHA56_RS13580;Dbxref=Genbank:WP_119834554.1;Name=WP_119834554.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004851130.1;locus_tag=PHA56_RS13580;product=efflux RND transporter permease subunit;protein_id=WP_119834554.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2824171 2824461 . - . ID=gene-PHA56_RS13585;Name=PHA56_RS13585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13585;old_locus_tag=PHA56_13590 NZ_CP116214.1 Protein Homology CDS 2824171 2824461 . - 0 ID=cds-WP_009654750.1;Parent=gene-PHA56_RS13585;Dbxref=Genbank:WP_009654750.1;Name=WP_009654750.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226878.1;locus_tag=PHA56_RS13585;product=hypothetical protein;protein_id=WP_009654750.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2824654 2825844 . - . ID=gene-PHA56_RS13590;Name=PHA56_RS13590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13590;old_locus_tag=PHA56_13595 NZ_CP116214.1 Protein Homology CDS 2824654 2825844 . - 0 ID=cds-WP_064374648.1;Parent=gene-PHA56_RS13590;Dbxref=Genbank:WP_064374648.1;Name=WP_064374648.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014838569.1;locus_tag=PHA56_RS13590;product=MFS transporter;protein_id=WP_064374648.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2826040 2826486 . + . ID=gene-PHA56_RS13595;Name=PHA56_RS13595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13595;old_locus_tag=PHA56_13600 NZ_CP116214.1 Protein Homology CDS 2826040 2826486 . + 0 ID=cds-WP_009654757.1;Parent=gene-PHA56_RS13595;Dbxref=Genbank:WP_009654757.1;Name=WP_009654757.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009654757.1;locus_tag=PHA56_RS13595;product=glyoxalase/bleomycin resistance/dioxygenase family protein;protein_id=WP_009654757.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2826536 2826754 . + . ID=gene-PHA56_RS13600;Name=PHA56_RS13600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13600;old_locus_tag=PHA56_13605 NZ_CP116214.1 Protein Homology CDS 2826536 2826754 . + 0 ID=cds-WP_032719161.1;Parent=gene-PHA56_RS13600;Dbxref=Genbank:WP_032719161.1;Name=WP_032719161.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004102282.1;locus_tag=PHA56_RS13600;product=hypothetical protein;protein_id=WP_032719161.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2826758 2827147 . - . ID=gene-PHA56_RS13605;Name=PHA56_RS13605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13605;old_locus_tag=PHA56_13610 NZ_CP116214.1 Protein Homology CDS 2826758 2827147 . - 0 ID=cds-WP_025105737.1;Parent=gene-PHA56_RS13605;Dbxref=Genbank:WP_025105737.1;Name=WP_025105737.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014838567.1;locus_tag=PHA56_RS13605;product=prolyl endopeptidase;protein_id=WP_025105737.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2827304 2827924 . + . ID=gene-PHA56_RS13610;Name=PHA56_RS13610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13610;old_locus_tag=PHA56_13615 NZ_CP116214.1 Protein Homology CDS 2827304 2827924 . + 0 ID=cds-WP_119834553.1;Parent=gene-PHA56_RS13610;Dbxref=Genbank:WP_119834553.1;Name=WP_119834553.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002905003.1;locus_tag=PHA56_RS13610;product=LysE family translocator;protein_id=WP_119834553.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2828132 2829319 . + . ID=gene-PHA56_RS13615;Name=PHA56_RS13615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13615;old_locus_tag=PHA56_13620 NZ_CP116214.1 Protein Homology CDS 2828132 2829319 . + 0 ID=cds-WP_032694373.1;Parent=gene-PHA56_RS13615;Dbxref=Genbank:WP_032694373.1;Name=WP_032694373.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016807422.1;locus_tag=PHA56_RS13615;product=YbfB/YjiJ family MFS transporter;protein_id=WP_032694373.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2829302 2830138 . - . ID=gene-PHA56_RS13620;Name=PHA56_RS13620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13620;old_locus_tag=PHA56_13625 NZ_CP116214.1 Protein Homology CDS 2829302 2830138 . - 0 ID=cds-WP_032719157.1;Parent=gene-PHA56_RS13620;Dbxref=Genbank:WP_032719157.1;Name=WP_032719157.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016807423.1;locus_tag=PHA56_RS13620;product=LysR substrate-binding domain-containing protein;protein_id=WP_032719157.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2830231 2831277 . + . ID=gene-PHA56_RS13625;Name=PHA56_RS13625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13625;old_locus_tag=PHA56_13630 NZ_CP116214.1 Protein Homology CDS 2830231 2831277 . + 0 ID=cds-WP_014229469.1;Parent=gene-PHA56_RS13625;Dbxref=Genbank:WP_014229469.1;Name=WP_014229469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229469.1;locus_tag=PHA56_RS13625;product=nitronate monooxygenase;protein_id=WP_014229469.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2831309 2831968 . - . ID=gene-PHA56_RS13630;Name=PHA56_RS13630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13630;old_locus_tag=PHA56_13635 NZ_CP116214.1 Protein Homology CDS 2831309 2831968 . - 0 ID=cds-WP_014229468.1;Parent=gene-PHA56_RS13630;Dbxref=Genbank:WP_014229468.1;Name=WP_014229468.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226885.1;locus_tag=PHA56_RS13630;product=ABC transporter permease subunit;protein_id=WP_014229468.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2831965 2832756 . - . ID=gene-PHA56_RS13635;Name=PHA56_RS13635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13635;old_locus_tag=PHA56_13640 NZ_CP116214.1 Protein Homology CDS 2831965 2832756 . - 0 ID=cds-WP_014229467.1;Parent=gene-PHA56_RS13635;Dbxref=Genbank:WP_014229467.1;Name=WP_014229467.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226886.1;locus_tag=PHA56_RS13635;product=ATP-binding cassette domain-containing protein;protein_id=WP_014229467.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2832753 2833559 . - . ID=gene-PHA56_RS13640;Name=PHA56_RS13640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13640;old_locus_tag=PHA56_13645 NZ_CP116214.1 Protein Homology CDS 2832753 2833559 . - 0 ID=cds-WP_032694354.1;Parent=gene-PHA56_RS13640;Dbxref=Genbank:WP_032694354.1;Name=WP_032694354.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226887.1;locus_tag=PHA56_RS13640;product=MetQ/NlpA family ABC transporter substrate-binding protein;protein_id=WP_032694354.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2833713 2834741 . - . ID=gene-PHA56_RS13645;Name=PHA56_RS13645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13645;old_locus_tag=PHA56_13650 NZ_CP116214.1 Protein Homology CDS 2833713 2834741 . - 0 ID=cds-WP_119834552.1;Parent=gene-PHA56_RS13645;Dbxref=Genbank:WP_119834552.1;Name=WP_119834552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226888.1;locus_tag=PHA56_RS13645;product=isopenicillin N synthase family oxygenase;protein_id=WP_119834552.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2835013 2835288 . + . ID=gene-PHA56_RS13650;Name=PHA56_RS13650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13650;old_locus_tag=PHA56_13655 NZ_CP116214.1 Protein Homology CDS 2835013 2835288 . + 0 ID=cds-WP_119834551.1;Parent=gene-PHA56_RS13650;Dbxref=Genbank:WP_119834551.1;Name=WP_119834551.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009654715.1;locus_tag=PHA56_RS13650;product=VF530 family protein;protein_id=WP_119834551.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2835330 2835518 . - . ID=gene-PHA56_RS13655;Name=PHA56_RS13655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13655;old_locus_tag=PHA56_13660 NZ_CP116214.1 Protein Homology CDS 2835330 2835518 . - 0 ID=cds-WP_004134116.1;Parent=gene-PHA56_RS13655;Dbxref=Genbank:WP_004134116.1;Name=WP_004134116.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004120040.1;locus_tag=PHA56_RS13655;product=hypothetical protein;protein_id=WP_004134116.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2835715 2835924 . - . ID=gene-PHA56_RS13660;Name=PHA56_RS13660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13660;old_locus_tag=PHA56_13665 NZ_CP116214.1 Protein Homology CDS 2835715 2835924 . - 0 ID=cds-WP_032694932.1;Parent=gene-PHA56_RS13660;Dbxref=Genbank:WP_032694932.1;Name=WP_032694932.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227293.1;locus_tag=PHA56_RS13660;product=DUF1471 domain-containing protein;protein_id=WP_032694932.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2836258 2836998 . + . ID=gene-PHA56_RS13665;Name=PHA56_RS13665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13665;old_locus_tag=PHA56_13670 NZ_CP116214.1 Protein Homology CDS 2836258 2836998 . + 0 ID=cds-WP_119834550.1;Parent=gene-PHA56_RS13665;Dbxref=Genbank:WP_119834550.1;Name=WP_119834550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008803988.1;locus_tag=PHA56_RS13665;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_119834550.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2837007 2837705 . + . ID=gene-PHA56_RS13670;Name=PHA56_RS13670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13670;old_locus_tag=PHA56_13675 NZ_CP116214.1 Protein Homology CDS 2837007 2837705 . + 0 ID=cds-WP_119834549.1;Parent=gene-PHA56_RS13670;Dbxref=Genbank:WP_119834549.1;Name=WP_119834549.1;Note=The N-terminal region of this protein%2C as described by TIGR01726%2C is a three transmembrane segment that identifies a subfamily of ABC transporter permease subunits%2C which specificities that include histidine%2C arginine%2C glutamine%2C glutamate%2C L-cystine (sic)%2C the opines (in Agrobacterium) octopine and nopaline%2C etc.;Ontology_term=GO:0015837,GO:0005886,GO:0055052;gbkey=CDS;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_process=amine transport|0015837||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004102263.1;locus_tag=PHA56_RS13670;product=ABC transporter permease subunit;protein_id=WP_119834549.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2837715 2838467 . + . ID=gene-PHA56_RS13675;Name=PHA56_RS13675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13675;old_locus_tag=PHA56_13680 NZ_CP116214.1 Protein Homology CDS 2837715 2838467 . + 0 ID=cds-WP_119834548.1;Parent=gene-PHA56_RS13675;Dbxref=Genbank:WP_119834548.1;Name=WP_119834548.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012967537.1;locus_tag=PHA56_RS13675;product=amino acid ABC transporter permease;protein_id=WP_119834548.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2838457 2839299 . + . ID=gene-PHA56_RS13680;Name=PHA56_RS13680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13680;old_locus_tag=PHA56_13685 NZ_CP116214.1 Protein Homology CDS 2838457 2839299 . + 0 ID=cds-WP_014229459.1;Parent=gene-PHA56_RS13680;Dbxref=Genbank:WP_014229459.1;Name=WP_014229459.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004134123.1;locus_tag=PHA56_RS13680;product=extracellular solute-binding protein;protein_id=WP_014229459.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2839304 2839843 . + . ID=gene-PHA56_RS13685;Name=PHA56_RS13685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13685;old_locus_tag=PHA56_13690 NZ_CP116214.1 Protein Homology CDS 2839304 2839843 . + 0 ID=cds-WP_032694933.1;Parent=gene-PHA56_RS13685;Dbxref=Genbank:WP_032694933.1;Name=WP_032694933.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229458.1;locus_tag=PHA56_RS13685;product=L-2-amino-thiazoline-4-carboxylic acid hydrolase;protein_id=WP_032694933.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2839831 2840586 . + . ID=gene-PHA56_RS13690;Name=PHA56_RS13690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13690;old_locus_tag=PHA56_13695 NZ_CP116214.1 Protein Homology CDS 2839831 2840586 . + 0 ID=cds-WP_032694934.1;Parent=gene-PHA56_RS13690;Dbxref=Genbank:WP_032694934.1;Name=WP_032694934.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004206988.1;locus_tag=PHA56_RS13690;product=VOC family protein;protein_id=WP_032694934.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2840599 2841387 . + . ID=gene-PHA56_RS13695;Name=PHA56_RS13695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13695;old_locus_tag=PHA56_13700 NZ_CP116214.1 Protein Homology CDS 2840599 2841387 . + 0 ID=cds-WP_014838554.1;Parent=gene-PHA56_RS13695;Dbxref=Genbank:WP_014838554.1;Name=WP_014838554.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004102258.1;locus_tag=PHA56_RS13695;product=pyrroline-5-carboxylate reductase;protein_id=WP_014838554.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2841384 2842340 . - . ID=gene-PHA56_RS13700;Name=PHA56_RS13700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13700;old_locus_tag=PHA56_13705 NZ_CP116214.1 Protein Homology CDS 2841384 2842340 . - 0 ID=cds-WP_004851102.1;Parent=gene-PHA56_RS13700;Dbxref=Genbank:WP_004851102.1;Name=WP_004851102.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004851102.1;locus_tag=PHA56_RS13700;product=AraC family transcriptional regulator;protein_id=WP_004851102.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2842449 2843648 . + . ID=gene-PHA56_RS13705;Name=PHA56_RS13705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13705;old_locus_tag=PHA56_13710 NZ_CP116214.1 Protein Homology CDS 2842449 2843648 . + 0 ID=cds-WP_014838552.1;Parent=gene-PHA56_RS13705;Dbxref=Genbank:WP_014838552.1;Name=WP_014838552.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009654721.1;locus_tag=PHA56_RS13705;product=MFS transporter;protein_id=WP_014838552.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2844401 2845858 . - . ID=gene-PHA56_RS13710;Name=PHA56_RS13710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13710;old_locus_tag=PHA56_13715 NZ_CP116214.1 Protein Homology CDS 2844401 2845858 . - 0 ID=cds-WP_038424546.1;Parent=gene-PHA56_RS13710;Dbxref=Genbank:WP_038424546.1;Name=WP_038424546.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004113209.1;locus_tag=PHA56_RS13710;product=leucyl aminopeptidase family protein;protein_id=WP_038424546.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2845862 2846815 . - . ID=gene-PHA56_RS13715;Name=PHA56_RS13715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13715;old_locus_tag=PHA56_13720 NZ_CP116214.1 Protein Homology CDS 2845862 2846815 . - 0 ID=cds-WP_009652191.1;Parent=gene-PHA56_RS13715;Dbxref=Genbank:WP_009652191.1;Name=WP_009652191.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004851097.1;locus_tag=PHA56_RS13715;product=N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase;protein_id=WP_009652191.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2846820 2848139 . - . ID=gene-PHA56_RS13720;Name=celB;gbkey=Gene;gene=celB;gene_biotype=protein_coding;locus_tag=PHA56_RS13720;old_locus_tag=PHA56_13725 NZ_CP116214.1 Protein Homology CDS 2846820 2848139 . - 0 ID=cds-WP_004851095.1;Parent=gene-PHA56_RS13720;Dbxref=Genbank:WP_004851095.1;Name=WP_004851095.1;Ontology_term=GO:0009401,GO:0008982,GO:0019191;gbkey=CDS;gene=celB;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,cellobiose transmembrane transporter activity|0019191||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004102253.1;locus_tag=PHA56_RS13720;product=PTS cellobiose transporter subunit IIC;protein_id=WP_004851095.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2848293 2849114 . + . ID=gene-PHA56_RS13725;Name=PHA56_RS13725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13725;old_locus_tag=PHA56_13730 NZ_CP116214.1 Protein Homology CDS 2848293 2849114 . + 0 ID=cds-WP_038424545.1;Parent=gene-PHA56_RS13725;Dbxref=Genbank:WP_038424545.1;Name=WP_038424545.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229451.1;locus_tag=PHA56_RS13725;product=homeodomain-like domain protein;protein_id=WP_038424545.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2849226 2849555 . - . ID=gene-PHA56_RS13730;Name=PHA56_RS13730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13730;old_locus_tag=PHA56_13735 NZ_CP116214.1 Protein Homology CDS 2849226 2849555 . - 0 ID=cds-WP_004851091.1;Parent=gene-PHA56_RS13730;Dbxref=Genbank:WP_004851091.1;Name=WP_004851091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004851091.1;locus_tag=PHA56_RS13730;product=NIPSNAP family protein;protein_id=WP_004851091.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2849845 2850654 . + . ID=gene-PHA56_RS13735;Name=PHA56_RS13735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13735;old_locus_tag=PHA56_13740 NZ_CP116214.1 Protein Homology CDS 2849845 2850654 . + 0 ID=cds-WP_038424544.1;Parent=gene-PHA56_RS13735;Dbxref=Genbank:WP_038424544.1;Name=WP_038424544.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004851089.1;locus_tag=PHA56_RS13735;product=ABC transporter ATP-binding protein;protein_id=WP_038424544.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2850679 2851635 . + . ID=gene-PHA56_RS13740;Name=PHA56_RS13740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13740;old_locus_tag=PHA56_13745 NZ_CP116214.1 Protein Homology CDS 2850679 2851635 . + 0 ID=cds-WP_038424543.1;Parent=gene-PHA56_RS13740;Dbxref=Genbank:WP_038424543.1;Name=WP_038424543.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229449.1;locus_tag=PHA56_RS13740;product=ABC transporter substrate-binding protein;protein_id=WP_038424543.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2851632 2852639 . + . ID=gene-PHA56_RS13745;Name=PHA56_RS13745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13745;old_locus_tag=PHA56_13750 NZ_CP116214.1 Protein Homology CDS 2851632 2852639 . + 0 ID=cds-WP_032694944.1;Parent=gene-PHA56_RS13745;Dbxref=Genbank:WP_032694944.1;Name=WP_032694944.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229448.1;locus_tag=PHA56_RS13745;product=iron ABC transporter permease;protein_id=WP_032694944.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2853070 2853576 . + . ID=gene-PHA56_RS13750;Name=PHA56_RS13750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13750;old_locus_tag=PHA56_13755 NZ_CP116214.1 Protein Homology CDS 2853070 2853576 . + 0 ID=cds-WP_038424542.1;Parent=gene-PHA56_RS13750;Dbxref=Genbank:WP_038424542.1;Name=WP_038424542.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229447.1;locus_tag=PHA56_RS13750;product=hypothetical protein;protein_id=WP_038424542.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2853906 2854382 . + . ID=gene-PHA56_RS13755;Name=PHA56_RS13755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13755;old_locus_tag=PHA56_13760 NZ_CP116214.1 Protein Homology CDS 2853906 2854382 . + 0 ID=cds-WP_004851079.1;Parent=gene-PHA56_RS13755;Dbxref=Genbank:WP_004851079.1;Name=WP_004851079.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004120085.1;locus_tag=PHA56_RS13755;product=WbuC family cupin fold metalloprotein;protein_id=WP_004851079.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2855081 2856166 . + . ID=gene-PHA56_RS13760;Name=ompC;gbkey=Gene;gene=ompC;gene_biotype=protein_coding;locus_tag=PHA56_RS13760;old_locus_tag=PHA56_13765 NZ_CP116214.1 Protein Homology CDS 2855081 2856166 . + 0 ID=cds-WP_038424541.1;Parent=gene-PHA56_RS13760;Dbxref=Genbank:WP_038424541.1;Name=WP_038424541.1;Ontology_term=GO:0034220,GO:0015288;gbkey=CDS;gene=ompC;go_function=porin activity|0015288||IEA;go_process=monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009652139.1;locus_tag=PHA56_RS13760;product=porin OmpC;protein_id=WP_038424541.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2856298 2857560 . - . ID=gene-PHA56_RS13765;Name=PHA56_RS13765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13765;old_locus_tag=PHA56_13770 NZ_CP116214.1 Protein Homology CDS 2856298 2857560 . - 0 ID=cds-WP_004851075.1;Parent=gene-PHA56_RS13765;Dbxref=Genbank:WP_004851075.1;Name=WP_004851075.1;Note=with GatAB forms a phosphoenolpyruvate-dependent sugar phosphotransferase transporter for galactitol%3B subunit IIC forms the translocation channel and contains the substrate binding site;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009652285.1;locus_tag=PHA56_RS13765;product=PTS galactitol transporter subunit IIC;protein_id=WP_004851075.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2857650 2858645 . - . ID=gene-PHA56_RS13770;Name=PHA56_RS13770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13770;old_locus_tag=PHA56_13775 NZ_CP116214.1 Protein Homology CDS 2857650 2858645 . - 0 ID=cds-WP_014229445.1;Parent=gene-PHA56_RS13770;Dbxref=Genbank:WP_014229445.1;Name=WP_014229445.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004120090.1;locus_tag=PHA56_RS13770;product=2-hydroxyacid dehydrogenase;protein_id=WP_014229445.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2858662 2859423 . - . ID=gene-PHA56_RS13775;Name=PHA56_RS13775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13775;old_locus_tag=PHA56_13780 NZ_CP116214.1 Protein Homology CDS 2858662 2859423 . - 0 ID=cds-WP_014229444.1;Parent=gene-PHA56_RS13775;Dbxref=Genbank:WP_014229444.1;Name=WP_014229444.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225290.1;locus_tag=PHA56_RS13775;product=SDR family oxidoreductase;protein_id=WP_014229444.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2859435 2860973 . - . ID=gene-PHA56_RS13780;Name=PHA56_RS13780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13780;old_locus_tag=PHA56_13785 NZ_CP116214.1 Protein Homology CDS 2859435 2860973 . - 0 ID=cds-WP_119834546.1;Parent=gene-PHA56_RS13780;Dbxref=Genbank:WP_119834546.1;Name=WP_119834546.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225291.1;locus_tag=PHA56_RS13780;product=carbohydrate kinase;protein_id=WP_119834546.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2860994 2861545 . - . ID=gene-PHA56_RS13785;Name=PHA56_RS13785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13785;old_locus_tag=PHA56_13790 NZ_CP116214.1 Protein Homology CDS 2860994 2861545 . - 0 ID=cds-WP_014229442.1;Parent=gene-PHA56_RS13785;Dbxref=Genbank:WP_014229442.1;Name=WP_014229442.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225292.1;locus_tag=PHA56_RS13785;product=glycerol-3-phosphate responsive antiterminator;protein_id=WP_014229442.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2861560 2862351 . - . ID=gene-PHA56_RS13790;Name=PHA56_RS13790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13790;old_locus_tag=PHA56_13795 NZ_CP116214.1 Protein Homology CDS 2861560 2862351 . - 0 ID=cds-WP_038424540.1;Parent=gene-PHA56_RS13790;Dbxref=Genbank:WP_038424540.1;Name=WP_038424540.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225293.1;locus_tag=PHA56_RS13790;product=phospho-2-dehydro-3-deoxyheptonate aldolase;protein_id=WP_038424540.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2862667 2862807 . - . ID=gene-PHA56_RS13795;Name=PHA56_RS13795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13795;old_locus_tag=PHA56_13800 NZ_CP116214.1 Protein Homology CDS 2862667 2862807 . - 0 ID=cds-WP_004851064.1;Parent=gene-PHA56_RS13795;Dbxref=Genbank:WP_004851064.1;Name=WP_004851064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014838542.1;locus_tag=PHA56_RS13795;product=hypothetical protein;protein_id=WP_004851064.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2863047 2863967 . - . ID=gene-PHA56_RS13800;Name=PHA56_RS13800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13800;old_locus_tag=PHA56_13805 NZ_CP116214.1 Protein Homology CDS 2863047 2863967 . - 0 ID=cds-WP_032719147.1;Parent=gene-PHA56_RS13800;Dbxref=Genbank:WP_032719147.1;Name=WP_032719147.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016807485.1;locus_tag=PHA56_RS13800;product=carbohydrate kinase;protein_id=WP_032719147.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2863964 2865334 . - . ID=gene-PHA56_RS13805;Name=PHA56_RS13805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13805;old_locus_tag=PHA56_13810 NZ_CP116214.1 Protein Homology CDS 2863964 2865334 . - 0 ID=cds-WP_038424539.1;Parent=gene-PHA56_RS13805;Dbxref=Genbank:WP_038424539.1;Name=WP_038424539.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017145836.1;locus_tag=PHA56_RS13805;product=hypothetical protein;protein_id=WP_038424539.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2865412 2866431 . - . ID=gene-PHA56_RS13810;Name=PHA56_RS13810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13810;old_locus_tag=PHA56_13815 NZ_CP116214.1 Protein Homology CDS 2865412 2866431 . - 0 ID=cds-WP_038424538.1;Parent=gene-PHA56_RS13810;Dbxref=Genbank:WP_038424538.1;Name=WP_038424538.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004113181.1;locus_tag=PHA56_RS13810;product=ribose ABC transporter permease;protein_id=WP_038424538.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2866418 2867950 . - . ID=gene-PHA56_RS13815;Name=PHA56_RS13815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13815;old_locus_tag=PHA56_13820 NZ_CP116214.1 Protein Homology CDS 2866418 2867950 . - 0 ID=cds-WP_038424537.1;Parent=gene-PHA56_RS13815;Dbxref=Genbank:WP_038424537.1;Name=WP_038424537.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229438.1;locus_tag=PHA56_RS13815;product=sugar ABC transporter ATP-binding protein;protein_id=WP_038424537.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2868016 2868714 . - . ID=gene-PHA56_RS13820;Name=PHA56_RS13820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13820;old_locus_tag=PHA56_13825 NZ_CP116214.1 Protein Homology CDS 2868016 2868714 . - 0 ID=cds-WP_271292982.1;Parent=gene-PHA56_RS13820;Dbxref=Genbank:WP_271292982.1;Name=WP_271292982.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024799.2;locus_tag=PHA56_RS13820;product=ABC transporter substrate-binding protein;protein_id=WP_271292982.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2869016 2870038 . - . ID=gene-PHA56_RS13825;Name=PHA56_RS13825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13825;old_locus_tag=PHA56_13830 NZ_CP116214.1 Protein Homology CDS 2869016 2870038 . - 0 ID=cds-WP_000156887.1;Parent=gene-PHA56_RS13825;Dbxref=Genbank:WP_000156887.1;Name=WP_000156887.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612074.1;locus_tag=PHA56_RS13825;product=IS110 family transposase;protein_id=WP_000156887.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2870035 2870334 . - . ID=gene-PHA56_RS13830;Name=PHA56_RS13830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13830;old_locus_tag=PHA56_13835 NZ_CP116214.1 GeneMarkS-2+ CDS 2870035 2870334 . - 0 ID=cds-WP_228717799.1;Parent=gene-PHA56_RS13830;Dbxref=Genbank:WP_228717799.1;Name=WP_228717799.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PHA56_RS13830;product=hypothetical protein;protein_id=WP_228717799.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2870631 2871602 . - . ID=gene-PHA56_RS13835;Name=PHA56_RS13835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13835;old_locus_tag=PHA56_13840 NZ_CP116214.1 Protein Homology CDS 2870631 2871602 . - 0 ID=cds-WP_232421719.1;Parent=gene-PHA56_RS13835;Dbxref=Genbank:WP_232421719.1;Name=WP_232421719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014838538.1;locus_tag=PHA56_RS13835;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_232421719.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2872016 2872642 . + . ID=gene-PHA56_RS13840;Name=PHA56_RS13840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13840;old_locus_tag=PHA56_13845 NZ_CP116214.1 Protein Homology CDS 2872016 2872642 . + 0 ID=cds-WP_038424536.1;Parent=gene-PHA56_RS13840;Dbxref=Genbank:WP_038424536.1;Name=WP_038424536.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004851049.1;locus_tag=PHA56_RS13840;product=DUF1062 domain-containing protein;protein_id=WP_038424536.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2872832 2873440 . + . ID=gene-PHA56_RS13845;Name=PHA56_RS13845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13845;old_locus_tag=PHA56_13850 NZ_CP116214.1 Protein Homology CDS 2872832 2873440 . + 0 ID=cds-WP_038424535.1;Parent=gene-PHA56_RS13845;Dbxref=Genbank:WP_038424535.1;Name=WP_038424535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014838537.1;locus_tag=PHA56_RS13845;product=DJ-1/PfpI family protein;protein_id=WP_038424535.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2873574 2873966 . - . ID=gene-PHA56_RS13850;Name=PHA56_RS13850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13850;old_locus_tag=PHA56_13855 NZ_CP116214.1 Protein Homology CDS 2873574 2873966 . - 0 ID=cds-WP_014229433.1;Parent=gene-PHA56_RS13850;Dbxref=Genbank:WP_014229433.1;Name=WP_014229433.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227376.1;locus_tag=PHA56_RS13850;product=VOC family protein;protein_id=WP_014229433.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2874104 2874676 . - . ID=gene-PHA56_RS13855;Name=PHA56_RS13855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13855;old_locus_tag=PHA56_13860 NZ_CP116214.1 Protein Homology CDS 2874104 2874676 . - 0 ID=cds-WP_004851043.1;Parent=gene-PHA56_RS13855;Dbxref=Genbank:WP_004851043.1;Name=WP_004851043.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014838535.1;locus_tag=PHA56_RS13855;product=DUF1349 domain-containing protein;protein_id=WP_004851043.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2874676 2875275 . - . ID=gene-PHA56_RS13860;Name=PHA56_RS13860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13860;old_locus_tag=PHA56_13865 NZ_CP116214.1 Protein Homology CDS 2874676 2875275 . - 0 ID=cds-WP_032694953.1;Parent=gene-PHA56_RS13860;Dbxref=Genbank:WP_032694953.1;Name=WP_032694953.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014838534.1;locus_tag=PHA56_RS13860;product=alpha/beta fold hydrolase;protein_id=WP_032694953.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2875484 2876392 . + . ID=gene-PHA56_RS13865;Name=PHA56_RS13865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13865;old_locus_tag=PHA56_13870 NZ_CP116214.1 Protein Homology CDS 2875484 2876392 . + 0 ID=cds-WP_038423160.1;Parent=gene-PHA56_RS13865;Dbxref=Genbank:WP_038423160.1;Name=WP_038423160.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008503223.1;locus_tag=PHA56_RS13865;product=LysR family transcriptional regulator;protein_id=WP_038423160.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2876491 2877087 . + . ID=gene-PHA56_RS13870;Name=PHA56_RS13870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13870;old_locus_tag=PHA56_13875 NZ_CP116214.1 Protein Homology CDS 2876491 2877087 . + 0 ID=cds-WP_014229429.1;Parent=gene-PHA56_RS13870;Dbxref=Genbank:WP_014229429.1;Name=WP_014229429.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004851036.1;locus_tag=PHA56_RS13870;product=NAD(P)H-dependent oxidoreductase;protein_id=WP_014229429.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2877109 2877909 . + . ID=gene-PHA56_RS13875;Name=PHA56_RS13875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13875;old_locus_tag=PHA56_13880 NZ_CP116214.1 Protein Homology CDS 2877109 2877909 . + 0 ID=cds-WP_038424534.1;Parent=gene-PHA56_RS13875;Dbxref=Genbank:WP_038424534.1;Name=WP_038424534.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229428.1;locus_tag=PHA56_RS13875;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_038424534.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2877914 2878342 . + . ID=gene-PHA56_RS13880;Name=PHA56_RS13880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13880;old_locus_tag=PHA56_13885 NZ_CP116214.1 Protein Homology CDS 2877914 2878342 . + 0 ID=cds-WP_014229427.1;Parent=gene-PHA56_RS13880;Dbxref=Genbank:WP_014229427.1;Name=WP_014229427.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229427.1;locus_tag=PHA56_RS13880;product=cyclophilin-like fold protein;protein_id=WP_014229427.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2878577 2879413 . + . ID=gene-PHA56_RS13885;Name=PHA56_RS13885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13885;old_locus_tag=PHA56_13890 NZ_CP116214.1 Protein Homology CDS 2878577 2879413 . + 0 ID=cds-WP_014838530.1;Parent=gene-PHA56_RS13885;Dbxref=Genbank:WP_014838530.1;Name=WP_014838530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227809.1;locus_tag=PHA56_RS13885;product=alpha/beta hydrolase;protein_id=WP_014838530.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2879455 2879673 . - . ID=gene-PHA56_RS13890;Name=PHA56_RS13890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13890;old_locus_tag=PHA56_13895 NZ_CP116214.1 Protein Homology CDS 2879455 2879673 . - 0 ID=cds-WP_004102179.1;Parent=gene-PHA56_RS13890;Dbxref=Genbank:WP_004102179.1;Name=WP_004102179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004102179.1;locus_tag=PHA56_RS13890;product=YdcH family protein;protein_id=WP_004102179.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2879820 2880713 . + . ID=gene-PHA56_RS13895;Name=PHA56_RS13895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13895;old_locus_tag=PHA56_13900 NZ_CP116214.1 Protein Homology CDS 2879820 2880713 . + 0 ID=cds-WP_032694958.1;Parent=gene-PHA56_RS13895;Dbxref=Genbank:WP_032694958.1;Name=WP_032694958.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226665.1;locus_tag=PHA56_RS13895;product=oxidoreductase;protein_id=WP_032694958.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2880750 2880998 . - . ID=gene-PHA56_RS13900;Name=PHA56_RS13900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13900;old_locus_tag=PHA56_13905 NZ_CP116214.1 Protein Homology CDS 2880750 2880998 . - 0 ID=cds-WP_004120166.1;Parent=gene-PHA56_RS13900;Dbxref=Genbank:WP_004120166.1;Name=WP_004120166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004213064.1;locus_tag=PHA56_RS13900;product=hypothetical protein;protein_id=WP_004120166.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2881376 2881855 . - . ID=gene-PHA56_RS13905;Name=tssD;gbkey=Gene;gene=tssD;gene_biotype=protein_coding;locus_tag=PHA56_RS13905;old_locus_tag=PHA56_13910 NZ_CP116214.1 Protein Homology CDS 2881376 2881855 . - 0 ID=cds-WP_014229423.1;Parent=gene-PHA56_RS13905;Dbxref=Genbank:WP_014229423.1;Name=WP_014229423.1;Ontology_term=GO:0003674;gbkey=CDS;gene=tssD;go_function=molecular_function|0003674||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006810320.1;locus_tag=PHA56_RS13905;product=type VI secretion system tube protein TssD;protein_id=WP_014229423.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2882089 2882781 . - . ID=gene-PHA56_RS13910;Name=PHA56_RS13910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13910;old_locus_tag=PHA56_13915 NZ_CP116214.1 Protein Homology CDS 2882089 2882781 . - 0 ID=cds-WP_014229422.1;Parent=gene-PHA56_RS13910;Dbxref=Genbank:WP_014229422.1;Name=WP_014229422.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004176129.1;locus_tag=PHA56_RS13910;product=hypothetical protein;protein_id=WP_014229422.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2883223 2884194 . + . ID=gene-PHA56_RS13915;Name=PHA56_RS13915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13915;old_locus_tag=PHA56_13920 NZ_CP116214.1 Protein Homology CDS 2883223 2884194 . + 0 ID=cds-WP_038424532.1;Parent=gene-PHA56_RS13915;Dbxref=Genbank:WP_038424532.1;Name=WP_038424532.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004120170.1;locus_tag=PHA56_RS13915;product=phosphotriesterase;protein_id=WP_038424532.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2884204 2884944 . + . ID=gene-PHA56_RS13920;Name=PHA56_RS13920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13920;old_locus_tag=PHA56_13925 NZ_CP116214.1 Protein Homology CDS 2884204 2884944 . + 0 ID=cds-WP_014229419.1;Parent=gene-PHA56_RS13920;Dbxref=Genbank:WP_014229419.1;Name=WP_014229419.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017145845.1;locus_tag=PHA56_RS13920;product=creatininase family protein;protein_id=WP_014229419.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2884937 2885380 . + . ID=gene-PHA56_RS13925;Name=PHA56_RS13925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13925;old_locus_tag=PHA56_13930 NZ_CP116214.1 Protein Homology CDS 2884937 2885380 . + 0 ID=cds-WP_014229418.1;Parent=gene-PHA56_RS13925;Dbxref=Genbank:WP_014229418.1;Name=WP_014229418.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004113154.1;locus_tag=PHA56_RS13925;product=PTS sugar transporter subunit IIA;protein_id=WP_014229418.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2885406 2885693 . + . ID=gene-PHA56_RS13930;Name=PHA56_RS13930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13930;old_locus_tag=PHA56_13935 NZ_CP116214.1 Protein Homology CDS 2885406 2885693 . + 0 ID=cds-WP_004851015.1;Parent=gene-PHA56_RS13930;Dbxref=Genbank:WP_004851015.1;Name=WP_004851015.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004851015.1;locus_tag=PHA56_RS13930;product=PTS sugar transporter subunit IIB;protein_id=WP_004851015.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2885690 2887000 . + . ID=gene-PHA56_RS13935;Name=PHA56_RS13935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13935;old_locus_tag=PHA56_13940 NZ_CP116214.1 Protein Homology CDS 2885690 2887000 . + 0 ID=cds-WP_004851013.1;Parent=gene-PHA56_RS13935;Dbxref=Genbank:WP_004851013.1;Name=WP_004851013.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004102166.1;locus_tag=PHA56_RS13935;product=PTS ascorbate transporter subunit IIC;protein_id=WP_004851013.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2887017 2887757 . + . ID=gene-PHA56_RS13940;Name=PHA56_RS13940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13940;old_locus_tag=PHA56_13945 NZ_CP116214.1 Protein Homology CDS 2887017 2887757 . + 0 ID=cds-WP_014229417.1;Parent=gene-PHA56_RS13940;Dbxref=Genbank:WP_014229417.1;Name=WP_014229417.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004851011.1;locus_tag=PHA56_RS13940;product=SIS domain-containing protein;protein_id=WP_014229417.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2887772 2888527 . + . ID=gene-PHA56_RS13945;Name=PHA56_RS13945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13945;old_locus_tag=PHA56_13950 NZ_CP116214.1 Protein Homology CDS 2887772 2888527 . + 0 ID=cds-WP_004851009.1;Parent=gene-PHA56_RS13945;Dbxref=Genbank:WP_004851009.1;Name=WP_004851009.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004136390.1;locus_tag=PHA56_RS13945;product=GntR family transcriptional regulator;protein_id=WP_004851009.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2888524 2888580 . - . ID=gene-PHA56_RS13950;Name=PHA56_RS13950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13950;old_locus_tag=PHA56_13955 NZ_CP116214.1 Protein Homology CDS 2888524 2888580 . - 0 ID=cds-WP_236944027.1;Parent=gene-PHA56_RS13950;Dbxref=Genbank:WP_236944027.1;Name=WP_236944027.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024835.2;locus_tag=PHA56_RS13950;product=helix-turn-helix domain-containing protein;protein_id=WP_236944027.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2888845 2889900 . - . ID=gene-PHA56_RS13955;Name=PHA56_RS13955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13955;old_locus_tag=PHA56_13960 NZ_CP116214.1 Protein Homology CDS 2888845 2889900 . - 0 ID=cds-WP_119834545.1;Parent=gene-PHA56_RS13955;Dbxref=Genbank:WP_119834545.1;Name=WP_119834545.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009652181.1;locus_tag=PHA56_RS13955;product=SDR family oxidoreductase;protein_id=WP_119834545.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2889998 2890885 . + . ID=gene-PHA56_RS13960;Name=PHA56_RS13960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13960;old_locus_tag=PHA56_13965 NZ_CP116214.1 Protein Homology CDS 2889998 2890885 . + 0 ID=cds-WP_119834544.1;Parent=gene-PHA56_RS13960;Dbxref=Genbank:WP_119834544.1;Name=WP_119834544.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229415.1;locus_tag=PHA56_RS13960;product=LysR family transcriptional regulator;protein_id=WP_119834544.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2890957 2891625 . + . ID=gene-PHA56_RS13965;Name=PHA56_RS13965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13965;old_locus_tag=PHA56_13970 NZ_CP116214.1 Protein Homology CDS 2890957 2891625 . + 0 ID=cds-WP_014229414.1;Parent=gene-PHA56_RS13965;Dbxref=Genbank:WP_014229414.1;Name=WP_014229414.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229414.1;locus_tag=PHA56_RS13965;product=class I SAM-dependent methyltransferase;protein_id=WP_014229414.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2891731 2891961 . - . ID=gene-PHA56_RS13970;Name=PHA56_RS13970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13970;old_locus_tag=PHA56_13975 NZ_CP116214.1 Protein Homology CDS 2891731 2891961 . - 0 ID=cds-WP_014229413.1;Parent=gene-PHA56_RS13970;Dbxref=Genbank:WP_014229413.1;Name=WP_014229413.1;Ontology_term=GO:0006725,GO:0016853;gbkey=CDS;go_function=isomerase activity|0016853||IEA;go_process=cellular aromatic compound metabolic process|0006725||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229413.1;locus_tag=PHA56_RS13970;product=tautomerase family protein;protein_id=WP_014229413.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2892023 2892490 . + . ID=gene-PHA56_RS13975;Name=PHA56_RS13975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13975;old_locus_tag=PHA56_13980 NZ_CP116214.1 Protein Homology CDS 2892023 2892490 . + 0 ID=cds-WP_014229412.1;Parent=gene-PHA56_RS13975;Dbxref=Genbank:WP_014229412.1;Name=WP_014229412.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004850998.1;locus_tag=PHA56_RS13975;product=helix-turn-helix domain-containing protein;protein_id=WP_014229412.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2892604 2892822 . + . ID=gene-PHA56_RS13980;Name=PHA56_RS13980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13980;old_locus_tag=PHA56_13985 NZ_CP116214.1 Protein Homology CDS 2892604 2892822 . + 0 ID=cds-WP_004102160.1;Parent=gene-PHA56_RS13980;Dbxref=Genbank:WP_004102160.1;Name=WP_004102160.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226911.1;locus_tag=PHA56_RS13980;product=ParD-like family protein;protein_id=WP_004102160.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2892803 2893582 . + . ID=gene-PHA56_RS13985;Name=map;gbkey=Gene;gene=map;gene_biotype=protein_coding;locus_tag=PHA56_RS13985;old_locus_tag=PHA56_13990 NZ_CP116214.1 Protein Homology CDS 2892803 2893582 . + 0 ID=cds-WP_038424529.1;Parent=gene-PHA56_RS13985;Dbxref=Genbank:WP_038424529.1;Name=WP_038424529.1;Ontology_term=GO:0036211;gbkey=CDS;gene=map;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004102158.1;locus_tag=PHA56_RS13985;product=type I methionyl aminopeptidase;protein_id=WP_038424529.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2893632 2894954 . - . ID=gene-PHA56_RS13990;Name=PHA56_RS13990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS13990;old_locus_tag=PHA56_13995 NZ_CP116214.1 Protein Homology CDS 2893632 2894954 . - 0 ID=cds-WP_032694968.1;Parent=gene-PHA56_RS13990;Dbxref=Genbank:WP_032694968.1;Name=WP_032694968.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229411.1;locus_tag=PHA56_RS13990;product=FAD-binding oxidoreductase;protein_id=WP_032694968.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2895391 2898456 . - . ID=gene-PHA56_RS13995;Name=ttrA;gbkey=Gene;gene=ttrA;gene_biotype=protein_coding;locus_tag=PHA56_RS13995;old_locus_tag=PHA56_14000 NZ_CP116214.1 Protein Homology CDS 2895391 2898456 . - 0 ID=cds-WP_038424528.1;Parent=gene-PHA56_RS13995;Dbxref=Genbank:WP_038424528.1;Name=WP_038424528.1;Ontology_term=GO:0016491,GO:0043546;gbkey=CDS;gene=ttrA;go_function=oxidoreductase activity|0016491||IEA,molybdopterin cofactor binding|0043546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460348.1;locus_tag=PHA56_RS13995;product=tetrathionate reductase subunit TtrA;protein_id=WP_038424528.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2898449 2899471 . - . ID=gene-PHA56_RS14000;Name=ttrC;gbkey=Gene;gene=ttrC;gene_biotype=protein_coding;locus_tag=PHA56_RS14000;old_locus_tag=PHA56_14005 NZ_CP116214.1 Protein Homology CDS 2898449 2899471 . - 0 ID=cds-WP_038424527.1;Parent=gene-PHA56_RS14000;Dbxref=Genbank:WP_038424527.1;Name=WP_038424527.1;gbkey=CDS;gene=ttrC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017441011.1;locus_tag=PHA56_RS14000;product=tetrathionate reductase subunit TtrC;protein_id=WP_038424527.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2899472 2900200 . - . ID=gene-PHA56_RS14005;Name=ttrB;gbkey=Gene;gene=ttrB;gene_biotype=protein_coding;locus_tag=PHA56_RS14005;old_locus_tag=PHA56_14010 NZ_CP116214.1 Protein Homology CDS 2899472 2900200 . - 0 ID=cds-WP_038424526.1;Parent=gene-PHA56_RS14005;Dbxref=Genbank:WP_038424526.1;Name=WP_038424526.1;gbkey=CDS;gene=ttrB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001518945.1;locus_tag=PHA56_RS14005;product=tetrathionate reductase subunit TtrB;protein_id=WP_038424526.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2900378 2902150 . + . ID=gene-PHA56_RS14010;Name=ttrS;gbkey=Gene;gene=ttrS;gene_biotype=protein_coding;locus_tag=PHA56_RS14010;old_locus_tag=PHA56_14015 NZ_CP116214.1 Protein Homology CDS 2900378 2902150 . + 0 ID=cds-WP_119834543.1;Parent=gene-PHA56_RS14010;Dbxref=Genbank:WP_119834543.1;Name=WP_119834543.1;gbkey=CDS;gene=ttrS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001214413.1;locus_tag=PHA56_RS14010;product=tetrathionate respiration histidine kinase TtrS;protein_id=WP_119834543.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2902125 2902712 . + . ID=gene-PHA56_RS14015;Name=ttrR;gbkey=Gene;gene=ttrR;gene_biotype=protein_coding;locus_tag=PHA56_RS14015;old_locus_tag=PHA56_14020 NZ_CP116214.1 Protein Homology CDS 2902125 2902712 . + 0 ID=cds-WP_014838517.1;Parent=gene-PHA56_RS14015;Dbxref=Genbank:WP_014838517.1;Name=WP_014838517.1;gbkey=CDS;gene=ttrR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014838517.1;locus_tag=PHA56_RS14015;product=tetrathionate respiration response regulator TtrR;protein_id=WP_014838517.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2902883 2903941 . + . ID=gene-PHA56_RS14020;Name=PHA56_RS14020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14020;old_locus_tag=PHA56_14025 NZ_CP116214.1 Protein Homology CDS 2902883 2903941 . + 0 ID=cds-WP_014838516.1;Parent=gene-PHA56_RS14020;Dbxref=Genbank:WP_014838516.1;Name=WP_014838516.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003846277.1;locus_tag=PHA56_RS14020;product=YncE family protein;protein_id=WP_014838516.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2903951 2905948 . + . ID=gene-PHA56_RS14025;Name=PHA56_RS14025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14025;old_locus_tag=PHA56_14030 NZ_CP116214.1 Protein Homology CDS 2903951 2905948 . + 0 ID=cds-WP_119834542.1;Parent=gene-PHA56_RS14025;Dbxref=Genbank:WP_119834542.1;Name=WP_119834542.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003024704.1;locus_tag=PHA56_RS14025;product=TonB-dependent receptor;protein_id=WP_119834542.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2905999 2906427 . - . ID=gene-PHA56_RS14030;Name=tolA;gbkey=Gene;gene=tolA;gene_biotype=protein_coding;locus_tag=PHA56_RS14030;old_locus_tag=PHA56_14035 NZ_CP116214.1 Protein Homology CDS 2905999 2906427 . - 0 ID=cds-WP_038424522.1;Parent=gene-PHA56_RS14030;Dbxref=Genbank:WP_038424522.1;Name=WP_038424522.1;Ontology_term=GO:0006810,GO:0005215,GO:0098567;gbkey=CDS;gene=tolA;go_component=periplasmic side of plasma membrane|0098567||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226982.1;locus_tag=PHA56_RS14030;product=cell envelope integrity protein TolA;protein_id=WP_038424522.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2906572 2907684 . - . ID=gene-PHA56_RS14035;Name=PHA56_RS14035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14035;old_locus_tag=PHA56_14040 NZ_CP116214.1 Protein Homology CDS 2906572 2907684 . - 0 ID=cds-WP_038424521.1;Parent=gene-PHA56_RS14035;Dbxref=Genbank:WP_038424521.1;Name=WP_038424521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229402.1;locus_tag=PHA56_RS14035;product=M20 family metallopeptidase;protein_id=WP_038424521.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2907684 2908439 . - . ID=gene-PHA56_RS14040;Name=PHA56_RS14040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14040;old_locus_tag=PHA56_14045 NZ_CP116214.1 Protein Homology CDS 2907684 2908439 . - 0 ID=cds-WP_014838512.1;Parent=gene-PHA56_RS14040;Dbxref=Genbank:WP_014838512.1;Name=WP_014838512.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226980.1;locus_tag=PHA56_RS14040;product=glutamine amidotransferase;protein_id=WP_014838512.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2908453 2909532 . - . ID=gene-PHA56_RS14045;Name=PHA56_RS14045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14045;old_locus_tag=PHA56_14050 NZ_CP116214.1 Protein Homology CDS 2908453 2909532 . - 0 ID=cds-WP_014838511.1;Parent=gene-PHA56_RS14045;Dbxref=Genbank:WP_014838511.1;Name=WP_014838511.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226979.1;locus_tag=PHA56_RS14045;product=phosphotriesterase-related protein;protein_id=WP_014838511.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2909536 2910537 . - . ID=gene-PHA56_RS14050;Name=PHA56_RS14050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14050;old_locus_tag=PHA56_14055 NZ_CP116214.1 Protein Homology CDS 2909536 2910537 . - 0 ID=cds-WP_014229399.1;Parent=gene-PHA56_RS14050;Dbxref=Genbank:WP_014229399.1;Name=WP_014229399.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226978.1;locus_tag=PHA56_RS14050;product=ABC transporter permease;protein_id=WP_014229399.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2910556 2911302 . - . ID=gene-PHA56_RS14055;Name=PHA56_RS14055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14055;old_locus_tag=PHA56_14060 NZ_CP116214.1 Protein Homology CDS 2910556 2911302 . - 0 ID=cds-WP_025106325.1;Parent=gene-PHA56_RS14055;Dbxref=Genbank:WP_025106325.1;Name=WP_025106325.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226977.1;locus_tag=PHA56_RS14055;product=ATP-binding cassette domain-containing protein;protein_id=WP_025106325.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2911683 2912705 . - . ID=gene-PHA56_RS14060;Name=PHA56_RS14060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14060;old_locus_tag=PHA56_14065 NZ_CP116214.1 Protein Homology CDS 2911683 2912705 . - 0 ID=cds-WP_038424520.1;Parent=gene-PHA56_RS14060;Dbxref=Genbank:WP_038424520.1;Name=WP_038424520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226976.1;locus_tag=PHA56_RS14060;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_038424520.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2913050 2914003 . + . ID=gene-PHA56_RS14065;Name=PHA56_RS14065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14065;old_locus_tag=PHA56_14070 NZ_CP116214.1 Protein Homology CDS 2913050 2914003 . + 0 ID=cds-WP_014229396.1;Parent=gene-PHA56_RS14065;Dbxref=Genbank:WP_014229396.1;Name=WP_014229396.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226974.1;locus_tag=PHA56_RS14065;product=substrate-binding domain-containing protein;protein_id=WP_014229396.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2914005 2914877 . - . ID=gene-PHA56_RS14070;Name=PHA56_RS14070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14070;old_locus_tag=PHA56_14075 NZ_CP116214.1 Protein Homology CDS 2914005 2914877 . - 0 ID=cds-WP_038424519.1;Parent=gene-PHA56_RS14070;Dbxref=Genbank:WP_038424519.1;Name=WP_038424519.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229395.1;locus_tag=PHA56_RS14070;product=PfkB family carbohydrate kinase;protein_id=WP_038424519.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2914904 2915749 . + . ID=gene-PHA56_RS14075;Name=PHA56_RS14075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14075;old_locus_tag=PHA56_14080 NZ_CP116214.1 Protein Homology CDS 2914904 2915749 . + 0 ID=cds-WP_038424518.1;Parent=gene-PHA56_RS14075;Dbxref=Genbank:WP_038424518.1;Name=WP_038424518.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226972.1;locus_tag=PHA56_RS14075;product=BtpA/SgcQ family protein;protein_id=WP_038424518.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2915749 2916393 . + . ID=gene-PHA56_RS14080;Name=PHA56_RS14080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14080;old_locus_tag=PHA56_14085 NZ_CP116214.1 Protein Homology CDS 2915749 2916393 . + 0 ID=cds-WP_014229393.1;Parent=gene-PHA56_RS14080;Dbxref=Genbank:WP_014229393.1;Name=WP_014229393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004850950.1;locus_tag=PHA56_RS14080;product=TenA family protein;protein_id=WP_014229393.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2916490 2917050 . + . ID=gene-PHA56_RS14085;Name=PHA56_RS14085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14085;old_locus_tag=PHA56_14090 NZ_CP116214.1 Protein Homology CDS 2916490 2917050 . + 0 ID=cds-WP_014838506.1;Parent=gene-PHA56_RS14085;Dbxref=Genbank:WP_014838506.1;Name=WP_014838506.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004136986.1;locus_tag=PHA56_RS14085;product=nucleotidyltransferase family protein;protein_id=WP_014838506.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2917295 2917744 . + . ID=gene-PHA56_RS14090;Name=lysM;gbkey=Gene;gene=lysM;gene_biotype=protein_coding;locus_tag=PHA56_RS14090;old_locus_tag=PHA56_14095 NZ_CP116214.1 Protein Homology CDS 2917295 2917744 . + 0 ID=cds-WP_009652149.1;Parent=gene-PHA56_RS14090;Dbxref=Genbank:WP_009652149.1;Name=WP_009652149.1;gbkey=CDS;gene=lysM;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226969.1;locus_tag=PHA56_RS14090;product=peptidoglycan-binding protein LysM;protein_id=WP_009652149.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2917913 2919934 . - . ID=gene-PHA56_RS14095;Name=fyuA;gbkey=Gene;gene=fyuA;gene_biotype=protein_coding;locus_tag=PHA56_RS14095;old_locus_tag=PHA56_14100 NZ_CP116214.1 Protein Homology CDS 2917913 2919934 . - 0 ID=cds-WP_014229387.1;Parent=gene-PHA56_RS14095;Dbxref=Genbank:WP_014229387.1;Name=WP_014229387.1;gbkey=CDS;gene=fyuA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227771.1;locus_tag=PHA56_RS14095;product=siderophore yersiniabactin receptor FyuA;protein_id=WP_014229387.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2920064 2921641 . - . ID=gene-PHA56_RS14100;Name=ybtE;gbkey=Gene;gene=ybtE;gene_biotype=protein_coding;locus_tag=PHA56_RS14100;old_locus_tag=PHA56_14105 NZ_CP116214.1 Protein Homology CDS 2920064 2921641 . - 0 ID=cds-WP_038424517.1;Parent=gene-PHA56_RS14100;Dbxref=Genbank:WP_038424517.1;Name=WP_038424517.1;gbkey=CDS;gene=ybtE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227770.1;locus_tag=PHA56_RS14100;product=yersiniabactin biosynthesis salycil-AMP ligase YbtE;protein_id=WP_038424517.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2921645 2922448 . - . ID=gene-PHA56_RS14105;Name=PHA56_RS14105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14105;old_locus_tag=PHA56_14110 NZ_CP116214.1 Protein Homology CDS 2921645 2922448 . - 0 ID=cds-WP_038424516.1;Parent=gene-PHA56_RS14105;Dbxref=Genbank:WP_038424516.1;Name=WP_038424516.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015874966.1;locus_tag=PHA56_RS14105;product=alpha/beta fold hydrolase;protein_id=WP_038424516.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2922445 2923542 . - . ID=gene-PHA56_RS14110;Name=PHA56_RS14110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14110;old_locus_tag=PHA56_14115 NZ_CP116214.1 Protein Homology CDS 2922445 2923542 . - 0 ID=cds-WP_014838503.1;Parent=gene-PHA56_RS14110;Dbxref=Genbank:WP_014838503.1;Name=WP_014838503.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004102107.1;locus_tag=PHA56_RS14110;product=thiazolinyl imide reductase;protein_id=WP_014838503.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2923539 2933015 . - . ID=gene-PHA56_RS14115;Name=irp1;gbkey=Gene;gene=irp1;gene_biotype=protein_coding;locus_tag=PHA56_RS14115;old_locus_tag=PHA56_14120 NZ_CP116214.1 Protein Homology CDS 2923539 2933015 . - 0 ID=cds-WP_271292977.1;Parent=gene-PHA56_RS14115;Dbxref=Genbank:WP_271292977.1;Name=WP_271292977.1;gbkey=CDS;gene=irp1;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227767.1;locus_tag=PHA56_RS14115;product=yersiniabactin polyketide synthase HMWP1;protein_id=WP_271292977.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2933102 2939200 . - . ID=gene-PHA56_RS14120;Name=PHA56_RS14120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14120;old_locus_tag=PHA56_14125 NZ_CP116214.1 Protein Homology CDS 2933102 2939200 . - 0 ID=cds-WP_038424514.1;Parent=gene-PHA56_RS14120;Dbxref=Genbank:WP_038424514.1;Name=WP_038424514.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227766.1;locus_tag=PHA56_RS14120;product=non-ribosomal peptide synthetase;protein_id=WP_038424514.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2939384 2940343 . - . ID=gene-PHA56_RS14125;Name=ybtA;gbkey=Gene;gene=ybtA;gene_biotype=protein_coding;locus_tag=PHA56_RS14125;old_locus_tag=PHA56_14130 NZ_CP116214.1 Protein Homology CDS 2939384 2940343 . - 0 ID=cds-WP_014229382.1;Parent=gene-PHA56_RS14125;Dbxref=Genbank:WP_014229382.1;Name=WP_014229382.1;gbkey=CDS;gene=ybtA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227765.1;locus_tag=PHA56_RS14125;product=yersiniabactin transcriptional regulator YbtA;protein_id=WP_014229382.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2940600 2942312 . + . ID=gene-PHA56_RS14130;Name=ybtP;gbkey=Gene;gene=ybtP;gene_biotype=protein_coding;locus_tag=PHA56_RS14130;old_locus_tag=PHA56_14135 NZ_CP116214.1 Protein Homology CDS 2940600 2942312 . + 0 ID=cds-WP_014229381.1;Parent=gene-PHA56_RS14130;Dbxref=Genbank:WP_014229381.1;Name=WP_014229381.1;gbkey=CDS;gene=ybtP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229381.1;locus_tag=PHA56_RS14130;product=yersiniabactin ABC transporter ATP-binding/permease protein YbtP;protein_id=WP_014229381.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2942299 2944101 . + . ID=gene-PHA56_RS14135;Name=ybtQ;gbkey=Gene;gene=ybtQ;gene_biotype=protein_coding;locus_tag=PHA56_RS14135;old_locus_tag=PHA56_14140 NZ_CP116214.1 Protein Homology CDS 2942299 2944101 . + 0 ID=cds-WP_014229380.1;Parent=gene-PHA56_RS14135;Dbxref=Genbank:WP_014229380.1;Name=WP_014229380.1;gbkey=CDS;gene=ybtQ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227763.1;locus_tag=PHA56_RS14135;product=yersiniabactin ABC transporter ATP-binding/permease protein YbtQ;protein_id=WP_014229380.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2944094 2945374 . + . ID=gene-PHA56_RS14140;Name=ybtX;gbkey=Gene;gene=ybtX;gene_biotype=protein_coding;locus_tag=PHA56_RS14140;old_locus_tag=PHA56_14145 NZ_CP116214.1 Protein Homology CDS 2944094 2945374 . + 0 ID=cds-WP_271292978.1;Parent=gene-PHA56_RS14140;Dbxref=Genbank:WP_271292978.1;Name=WP_271292978.1;gbkey=CDS;gene=ybtX;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227762.1;locus_tag=PHA56_RS14140;product=yersiniabactin-associated zinc MFS transporter YbtX;protein_id=WP_271292978.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2945402 2946712 . + . ID=gene-PHA56_RS14145;Name=PHA56_RS14145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14145;old_locus_tag=PHA56_14150 NZ_CP116214.1 Protein Homology CDS 2945402 2946712 . + 0 ID=cds-WP_038424513.1;Parent=gene-PHA56_RS14145;Dbxref=Genbank:WP_038424513.1;Name=WP_038424513.1;Ontology_term=GO:0009058,GO:0008909,GO:0043904;gbkey=CDS;go_function=isochorismate synthase activity|0008909||IEA,isochorismate pyruvate lyase activity|0043904||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004102087.1;locus_tag=PHA56_RS14145;product=salicylate synthase;protein_id=WP_038424513.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2946782 2948173 . - . ID=gene-PHA56_RS14150;Name=pgtP;gbkey=Gene;gene=pgtP;gene_biotype=protein_coding;locus_tag=PHA56_RS14150;old_locus_tag=PHA56_14155 NZ_CP116214.1 Protein Homology CDS 2946782 2948173 . - 0 ID=cds-WP_009652152.1;Parent=gene-PHA56_RS14150;Dbxref=Genbank:WP_009652152.1;Name=WP_009652152.1;gbkey=CDS;gene=pgtP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004205872.1;locus_tag=PHA56_RS14150;product=phosphoglycerate transporter PgtP;protein_id=WP_009652152.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2948547 2949800 . + . ID=gene-PHA56_RS14155;Name=pgtC;gbkey=Gene;gene=pgtC;gene_biotype=protein_coding;locus_tag=PHA56_RS14155;old_locus_tag=PHA56_14160 NZ_CP116214.1 Protein Homology CDS 2948547 2949800 . + 0 ID=cds-WP_014838494.1;Parent=gene-PHA56_RS14155;Dbxref=Genbank:WP_014838494.1;Name=WP_014838494.1;gbkey=CDS;gene=pgtC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014838494.1;locus_tag=PHA56_RS14155;product=phosphoglycerate transport regulator PgtC;protein_id=WP_014838494.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2949800 2951806 . + . ID=gene-PHA56_RS14160;Name=pgtB;gbkey=Gene;gene=pgtB;gene_biotype=protein_coding;locus_tag=PHA56_RS14160;old_locus_tag=PHA56_14165 NZ_CP116214.1 Protein Homology CDS 2949800 2951806 . + 0 ID=cds-WP_271292983.1;Parent=gene-PHA56_RS14160;Dbxref=Genbank:WP_271292983.1;Name=WP_271292983.1;gbkey=CDS;gene=pgtB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461338.1;locus_tag=PHA56_RS14160;product=two-component system sensor histidine kinase PgtB;protein_id=WP_271292983.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2951796 2953046 . + . ID=gene-PHA56_RS14165;Name=PHA56_RS14165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14165;old_locus_tag=PHA56_14170 NZ_CP116214.1 Protein Homology CDS 2951796 2953046 . + 0 ID=cds-WP_038424511.1;Parent=gene-PHA56_RS14165;Dbxref=Genbank:WP_038424511.1;Name=WP_038424511.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009652214.1;locus_tag=PHA56_RS14165;product=sigma-54 dependent transcriptional regulator;protein_id=WP_038424511.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2953397 2954680 . + . ID=gene-PHA56_RS14170;Name=PHA56_RS14170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14170;old_locus_tag=PHA56_14175 NZ_CP116214.1 Protein Homology CDS 2953397 2954680 . + 0 ID=cds-WP_014229376.1;Parent=gene-PHA56_RS14170;Dbxref=Genbank:WP_014229376.1;Name=WP_014229376.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311683.1;locus_tag=PHA56_RS14170;product=HAAAP family serine/threonine permease;protein_id=WP_014229376.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2954744 2956111 . + . ID=gene-PHA56_RS14175;Name=PHA56_RS14175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14175;old_locus_tag=PHA56_14180 NZ_CP116214.1 Protein Homology CDS 2954744 2956111 . + 0 ID=cds-WP_014229375.1;Parent=gene-PHA56_RS14175;Dbxref=Genbank:WP_014229375.1;Name=WP_014229375.1;Ontology_term=GO:0009063,GO:0003941,GO:0051539;gbkey=CDS;go_function=L-serine ammonia-lyase activity|0003941||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=amino acid catabolic process|0009063||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004137026.1;locus_tag=PHA56_RS14175;product=L-serine ammonia-lyase;protein_id=WP_014229375.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2956185 2956625 . - . ID=gene-PHA56_RS14180;Name=PHA56_RS14180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14180;old_locus_tag=PHA56_14185 NZ_CP116214.1 Protein Homology CDS 2956185 2956625 . - 0 ID=cds-WP_014229374.1;Parent=gene-PHA56_RS14180;Dbxref=Genbank:WP_014229374.1;Name=WP_014229374.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004113094.1;locus_tag=PHA56_RS14180;product=helix-turn-helix transcriptional regulator;protein_id=WP_014229374.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2956963 2957292 . + . ID=gene-PHA56_RS14185;Name=PHA56_RS14185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14185;old_locus_tag=PHA56_14190 NZ_CP116214.1 Protein Homology CDS 2956963 2957292 . + 0 ID=cds-WP_014838492.1;Parent=gene-PHA56_RS14185;Dbxref=Genbank:WP_014838492.1;Name=WP_014838492.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015382.2;locus_tag=PHA56_RS14185;product=carcinine hydrolase/isopenicillin-N N-acyltransferase family protein;protein_id=WP_014838492.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2957501 2958316 . - . ID=gene-PHA56_RS14190;Name=PHA56_RS14190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14190;old_locus_tag=PHA56_14195 NZ_CP116214.1 Protein Homology CDS 2957501 2958316 . - 0 ID=cds-WP_271292979.1;Parent=gene-PHA56_RS14190;Dbxref=Genbank:WP_271292979.1;Name=WP_271292979.1;Ontology_term=GO:0046677;gbkey=CDS;go_process=response to antibiotic|0046677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032492145.1;locus_tag=PHA56_RS14190;product=APH(3')-I family aminoglycoside O-phosphotransferase;protein_id=WP_271292979.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2958657 2959010 . + . ID=gene-PHA56_RS14195;Name=PHA56_RS14195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14195;old_locus_tag=PHA56_14200 NZ_CP116214.1 Protein Homology CDS 2958657 2959010 . + 0 ID=cds-WP_038424961.1;Parent=gene-PHA56_RS14195;Dbxref=Genbank:WP_038424961.1;Name=WP_038424961.1;Ontology_term=GO:0030638;gbkey=CDS;go_process=polyketide metabolic process|0030638||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019849594.1;locus_tag=PHA56_RS14195;product=ester cyclase;protein_id=WP_038424961.1;transl_table=11 NZ_CP116214.1 RefSeq pseudogene 2959338 2959639 . - . ID=gene-PHA56_RS14200;Name=PHA56_RS14200;end_range=2959639,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS14200;old_locus_tag=PHA56_14205;partial=true;pseudo=true;start_range=.,2959338 NZ_CP116214.1 Protein Homology CDS 2959338 2959639 . - 0 ID=cds-PHA56_RS14200;Parent=gene-PHA56_RS14200;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=2959639,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001567368.1;locus_tag=PHA56_RS14200;partial=true;product=ISNCY family transposase;pseudo=true;start_range=.,2959338;transl_table=11 NZ_CP116214.1 RefSeq gene 2959690 2961222 . + . ID=gene-PHA56_RS14205;Name=PHA56_RS14205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14205;old_locus_tag=PHA56_14210 NZ_CP116214.1 Protein Homology CDS 2959690 2961222 . + 0 ID=cds-WP_022652342.1;Parent=gene-PHA56_RS14205;Dbxref=Genbank:WP_022652342.1;Name=WP_022652342.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012218041.1;locus_tag=PHA56_RS14205;product=IS3-like element ISKpn38 family transposase;protein_id=WP_022652342.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2961493 2962491 . - . ID=gene-PHA56_RS14210;Name=PHA56_RS14210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14210;old_locus_tag=PHA56_14215 NZ_CP116214.1 Protein Homology CDS 2961493 2962491 . - 0 ID=cds-WP_032694994.1;Parent=gene-PHA56_RS14210;Dbxref=Genbank:WP_032694994.1;Name=WP_032694994.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004850899.1;locus_tag=PHA56_RS14210;product=AraC family transcriptional regulator;protein_id=WP_032694994.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2962892 2963785 . + . ID=gene-PHA56_RS14215;Name=PHA56_RS14215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14215;old_locus_tag=PHA56_14220 NZ_CP116214.1 Protein Homology CDS 2962892 2963785 . + 0 ID=cds-WP_038424508.1;Parent=gene-PHA56_RS14215;Dbxref=Genbank:WP_038424508.1;Name=WP_038424508.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009652220.1;locus_tag=PHA56_RS14215;product=transporter;protein_id=WP_038424508.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2963786 2964322 . + . ID=gene-PHA56_RS14220;Name=PHA56_RS14220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14220;old_locus_tag=PHA56_14225 NZ_CP116214.1 Protein Homology CDS 2963786 2964322 . + 0 ID=cds-WP_223226793.1;Parent=gene-PHA56_RS14220;Dbxref=Genbank:WP_223226793.1;Name=WP_223226793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004850892.1;locus_tag=PHA56_RS14220;product=group 1 truncated hemoglobin;protein_id=WP_223226793.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2964458 2965972 . + . ID=gene-PHA56_RS14225;Name=PHA56_RS14225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14225;old_locus_tag=PHA56_14230 NZ_CP116214.1 Protein Homology CDS 2964458 2965972 . + 0 ID=cds-WP_014229361.1;Parent=gene-PHA56_RS14225;Dbxref=Genbank:WP_014229361.1;Name=WP_014229361.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229361.1;locus_tag=PHA56_RS14225;product=amidase;protein_id=WP_014229361.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2965996 2966604 . + . ID=gene-PHA56_RS14230;Name=nthA;gbkey=Gene;gene=nthA;gene_biotype=protein_coding;locus_tag=PHA56_RS14230;old_locus_tag=PHA56_14235 NZ_CP116214.1 Protein Homology CDS 2965996 2966604 . + 0 ID=cds-WP_014229360.1;Parent=gene-PHA56_RS14230;Dbxref=Genbank:WP_014229360.1;Name=WP_014229360.1;Ontology_term=GO:0050898,GO:0018822;gbkey=CDS;gene=nthA;go_function=nitrile hydratase activity|0018822||IEA;go_process=nitrile metabolic process|0050898||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004850888.1;locus_tag=PHA56_RS14230;product=nitrile hydratase subunit alpha;protein_id=WP_014229360.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2966620 2967273 . + . ID=gene-PHA56_RS14235;Name=nthB;gbkey=Gene;gene=nthB;gene_biotype=protein_coding;locus_tag=PHA56_RS14235;old_locus_tag=PHA56_14240 NZ_CP116214.1 Protein Homology CDS 2966620 2967273 . + 0 ID=cds-WP_014229359.1;Parent=gene-PHA56_RS14235;Dbxref=Genbank:WP_014229359.1;Name=WP_014229359.1;Ontology_term=GO:0050898,GO:0018822;gbkey=CDS;gene=nthB;go_function=nitrile hydratase activity|0018822||IEA;go_process=nitrile metabolic process|0050898||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004850886.1;locus_tag=PHA56_RS14235;product=nitrile hydratase subunit beta;protein_id=WP_014229359.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2967270 2967737 . + . ID=gene-PHA56_RS14240;Name=PHA56_RS14240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14240;old_locus_tag=PHA56_14245 NZ_CP116214.1 Protein Homology CDS 2967270 2967737 . + 0 ID=cds-WP_014229358.1;Parent=gene-PHA56_RS14240;Dbxref=Genbank:WP_014229358.1;Name=WP_014229358.1;Ontology_term=GO:0050898,GO:0003674;gbkey=CDS;go_function=molecular_function|0003674||IEA;go_process=nitrile metabolic process|0050898||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004850885.1;locus_tag=PHA56_RS14240;product=nitrile hydratase accessory protein;protein_id=WP_014229358.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2967734 2967943 . + . ID=gene-PHA56_RS14245;Name=PHA56_RS14245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14245;old_locus_tag=PHA56_14250 NZ_CP116214.1 Protein Homology CDS 2967734 2967943 . + 0 ID=cds-WP_004850884.1;Parent=gene-PHA56_RS14245;Dbxref=Genbank:WP_004850884.1;Name=WP_004850884.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014838480.1;locus_tag=PHA56_RS14245;product=CbtB-domain containing protein;protein_id=WP_004850884.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2967954 2968709 . + . ID=gene-PHA56_RS14250;Name=PHA56_RS14250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14250;old_locus_tag=PHA56_14255 NZ_CP116214.1 Protein Homology CDS 2967954 2968709 . + 0 ID=cds-WP_014229357.1;Parent=gene-PHA56_RS14250;Dbxref=Genbank:WP_014229357.1;Name=WP_014229357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229357.1;locus_tag=PHA56_RS14250;product=CbtA family protein;protein_id=WP_014229357.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2968714 2969271 . + . ID=gene-PHA56_RS14255;Name=PHA56_RS14255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14255;old_locus_tag=PHA56_14260 NZ_CP116214.1 Protein Homology CDS 2968714 2969271 . + 0 ID=cds-WP_271292980.1;Parent=gene-PHA56_RS14255;Dbxref=Genbank:WP_271292980.1;Name=WP_271292980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014838479.1;locus_tag=PHA56_RS14255;product=histidine phosphatase family protein;protein_id=WP_271292980.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2969323 2971956 . - . ID=gene-PHA56_RS14260;Name=PHA56_RS14260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14260;old_locus_tag=PHA56_14265 NZ_CP116214.1 Protein Homology CDS 2969323 2971956 . - 0 ID=cds-WP_162933662.1;Parent=gene-PHA56_RS14260;Dbxref=Genbank:WP_162933662.1;Name=WP_162933662.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225299.1;locus_tag=PHA56_RS14260;product=LuxR C-terminal-related transcriptional regulator;protein_id=WP_162933662.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2972330 2973289 . + . ID=gene-PHA56_RS14265;Name=PHA56_RS14265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14265;old_locus_tag=PHA56_14270 NZ_CP116214.1 Protein Homology CDS 2972330 2973289 . + 0 ID=cds-WP_014229354.1;Parent=gene-PHA56_RS14265;Dbxref=Genbank:WP_014229354.1;Name=WP_014229354.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225298.1;locus_tag=PHA56_RS14265;product=thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha;protein_id=WP_014229354.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2973301 2974320 . + . ID=gene-PHA56_RS14270;Name=PHA56_RS14270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14270;old_locus_tag=PHA56_14275 NZ_CP116214.1 Protein Homology CDS 2973301 2974320 . + 0 ID=cds-WP_014229353.1;Parent=gene-PHA56_RS14270;Dbxref=Genbank:WP_014229353.1;Name=WP_014229353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225297.1;locus_tag=PHA56_RS14270;product=alpha-ketoacid dehydrogenase subunit beta;protein_id=WP_014229353.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2974324 2975853 . + . ID=gene-PHA56_RS14275;Name=PHA56_RS14275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14275;old_locus_tag=PHA56_14280 NZ_CP116214.1 Protein Homology CDS 2974324 2975853 . + 0 ID=cds-WP_014229352.1;Parent=gene-PHA56_RS14275;Dbxref=Genbank:WP_014229352.1;Name=WP_014229352.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014838477.1;locus_tag=PHA56_RS14275;product=2-oxo acid dehydrogenase subunit E2;protein_id=WP_014229352.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2975837 2977234 . + . ID=gene-PHA56_RS14280;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=PHA56_RS14280;old_locus_tag=PHA56_14285 NZ_CP116214.1 Protein Homology CDS 2975837 2977234 . + 0 ID=cds-WP_014229351.1;Parent=gene-PHA56_RS14280;Dbxref=Genbank:WP_014229351.1;Name=WP_014229351.1;Ontology_term=GO:0006096,GO:0045454,GO:0051068,GO:0004148;gbkey=CDS;gene=lpdA;go_function=dihydrolipoyl dehydrogenase activity|0004148||IEA;go_process=glycolytic process|0006096||IEA,cell redox homeostasis|0045454||IEA,dihydrolipoamide metabolic process|0051068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225295.1;locus_tag=PHA56_RS14280;product=dihydrolipoyl dehydrogenase;protein_id=WP_014229351.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2977279 2979348 . - . ID=gene-PHA56_RS14285;Name=glgX;gbkey=Gene;gene=glgX;gene_biotype=protein_coding;locus_tag=PHA56_RS14285;old_locus_tag=PHA56_14290 NZ_CP116214.1 Protein Homology CDS 2977279 2979348 . - 0 ID=cds-WP_119834686.1;Parent=gene-PHA56_RS14285;Dbxref=Genbank:WP_119834686.1;Name=WP_119834686.1;Ontology_term=GO:0005980,GO:0004133;gbkey=CDS;gene=glgX;go_function=glycogen debranching enzyme activity|0004133||IEA;go_process=glycogen catabolic process|0005980||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014838475.1;locus_tag=PHA56_RS14285;product=glycogen debranching protein GlgX;protein_id=WP_119834686.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2979354 2981897 . - . ID=gene-PHA56_RS14290;Name=treY;gbkey=Gene;gene=treY;gene_biotype=protein_coding;locus_tag=PHA56_RS14290;old_locus_tag=PHA56_14295 NZ_CP116214.1 Protein Homology CDS 2979354 2981897 . - 0 ID=cds-WP_119834685.1;Parent=gene-PHA56_RS14290;Dbxref=Genbank:WP_119834685.1;Name=WP_119834685.1;Ontology_term=GO:0005992,GO:0047470;gbkey=CDS;gene=treY;go_function=(1%2C4)-alpha-D-glucan 1-alpha-D-glucosylmutase activity|0047470||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014838474.1;locus_tag=PHA56_RS14290;product=malto-oligosyltrehalose synthase;protein_id=WP_119834685.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2981894 2983681 . - . ID=gene-PHA56_RS14295;Name=treZ;gbkey=Gene;gene=treZ;gene_biotype=protein_coding;locus_tag=PHA56_RS14295;old_locus_tag=PHA56_14300 NZ_CP116214.1 Protein Homology CDS 2981894 2983681 . - 0 ID=cds-WP_038424504.1;Parent=gene-PHA56_RS14295;Dbxref=Genbank:WP_038424504.1;Name=WP_038424504.1;Ontology_term=GO:0005992,GO:0016798;gbkey=CDS;gene=treZ;go_function=hydrolase activity%2C acting on glycosyl bonds|0016798||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229348.1;locus_tag=PHA56_RS14295;product=malto-oligosyltrehalose trehalohydrolase;protein_id=WP_038424504.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2983826 2984353 . + . ID=gene-PHA56_RS14300;Name=PHA56_RS14300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14300;old_locus_tag=PHA56_14305 NZ_CP116214.1 Protein Homology CDS 2983826 2984353 . + 0 ID=cds-WP_014229347.1;Parent=gene-PHA56_RS14300;Dbxref=Genbank:WP_014229347.1;Name=WP_014229347.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229347.1;locus_tag=PHA56_RS14300;product=GNAT family N-acetyltransferase;protein_id=WP_014229347.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2984470 2985354 . + . ID=gene-PHA56_RS14305;Name=PHA56_RS14305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14305;old_locus_tag=PHA56_14310 NZ_CP116214.1 Protein Homology CDS 2984470 2985354 . + 0 ID=cds-WP_004850866.1;Parent=gene-PHA56_RS14305;Dbxref=Genbank:WP_004850866.1;Name=WP_004850866.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004112980.1;locus_tag=PHA56_RS14305;product=SDR family oxidoreductase;protein_id=WP_004850866.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2985408 2985638 . - . ID=gene-PHA56_RS14310;Name=PHA56_RS14310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14310;old_locus_tag=PHA56_14315 NZ_CP116214.1 Protein Homology CDS 2985408 2985638 . - 0 ID=cds-WP_014838472.1;Parent=gene-PHA56_RS14310;Dbxref=Genbank:WP_014838472.1;Name=WP_014838472.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004850864.1;locus_tag=PHA56_RS14310;product=hypothetical protein;protein_id=WP_014838472.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2985957 2986118 . + . ID=gene-PHA56_RS14315;Name=PHA56_RS14315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14315;old_locus_tag=PHA56_14320 NZ_CP116214.1 Protein Homology CDS 2985957 2986118 . + 0 ID=cds-WP_004102047.1;Parent=gene-PHA56_RS14315;Dbxref=Genbank:WP_004102047.1;Name=WP_004102047.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004850860.1;locus_tag=PHA56_RS14315;product=YqaE/Pmp3 family membrane protein;protein_id=WP_004102047.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2986176 2986616 . + . ID=gene-PHA56_RS14320;Name=ivy;gbkey=Gene;gene=ivy;gene_biotype=protein_coding;locus_tag=PHA56_RS14320;old_locus_tag=PHA56_14325 NZ_CP116214.1 Protein Homology CDS 2986176 2986616 . + 0 ID=cds-WP_032695007.1;Parent=gene-PHA56_RS14320;Dbxref=Genbank:WP_032695007.1;Name=WP_032695007.1;gbkey=CDS;gene=ivy;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229345.1;locus_tag=PHA56_RS14320;product=Ivy family C-type lysozyme inhibitor;protein_id=WP_032695007.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2986705 2987316 . - . ID=gene-PHA56_RS14325;Name=nqrE;gbkey=Gene;gene=nqrE;gene_biotype=protein_coding;locus_tag=PHA56_RS14325;old_locus_tag=PHA56_14330 NZ_CP116214.1 Protein Homology CDS 2986705 2987316 . - 0 ID=cds-WP_009652200.1;Parent=gene-PHA56_RS14325;Dbxref=Genbank:WP_009652200.1;Name=WP_009652200.1;Ontology_term=GO:0006814,GO:0016655;gbkey=CDS;gene=nqrE;go_function=oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009652200.1;locus_tag=PHA56_RS14325;product=NADH:ubiquinone reductase (Na(+)-transporting) subunit E;protein_id=WP_009652200.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2987438 2988973 . - . ID=gene-PHA56_RS14330;Name=PHA56_RS14330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14330;old_locus_tag=PHA56_14335 NZ_CP116214.1 Protein Homology CDS 2987438 2988973 . - 0 ID=cds-WP_038424502.1;Parent=gene-PHA56_RS14330;Dbxref=Genbank:WP_038424502.1;Name=WP_038424502.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014838471.1;locus_tag=PHA56_RS14330;product=cyclic diguanylate phosphodiesterase;protein_id=WP_038424502.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2989282 2990571 . + . ID=gene-PHA56_RS14335;Name=PHA56_RS14335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14335;old_locus_tag=PHA56_14340 NZ_CP116214.1 Protein Homology CDS 2989282 2990571 . + 0 ID=cds-WP_162140809.1;Parent=gene-PHA56_RS14335;Dbxref=Genbank:WP_162140809.1;Name=WP_162140809.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013512166.1;locus_tag=PHA56_RS14335;product=glycoside hydrolase family 10 protein;protein_id=WP_162140809.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2990623 2991075 . + . ID=gene-PHA56_RS14340;Name=PHA56_RS14340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14340;old_locus_tag=PHA56_14345 NZ_CP116214.1 Protein Homology CDS 2990623 2991075 . + 0 ID=cds-WP_014229342.1;Parent=gene-PHA56_RS14340;Dbxref=Genbank:WP_014229342.1;Name=WP_014229342.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004850850.1;locus_tag=PHA56_RS14340;product=nuclear transport factor 2 family protein;protein_id=WP_014229342.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2991242 2991859 . + . ID=gene-PHA56_RS14345;Name=PHA56_RS14345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14345;old_locus_tag=PHA56_14350 NZ_CP116214.1 Protein Homology CDS 2991242 2991859 . + 0 ID=cds-WP_038424501.1;Parent=gene-PHA56_RS14345;Dbxref=Genbank:WP_038424501.1;Name=WP_038424501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229339.1;locus_tag=PHA56_RS14345;product=TetR/AcrR family transcriptional regulator;protein_id=WP_038424501.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2991917 2992477 . - . ID=gene-PHA56_RS14350;Name=PHA56_RS14350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14350;old_locus_tag=PHA56_14355 NZ_CP116214.1 Protein Homology CDS 2991917 2992477 . - 0 ID=cds-WP_014229338.1;Parent=gene-PHA56_RS14350;Dbxref=Genbank:WP_014229338.1;Name=WP_014229338.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229338.1;locus_tag=PHA56_RS14350;product=RNA polymerase sigma factor;protein_id=WP_014229338.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2992483 2992908 . - . ID=gene-PHA56_RS14355;Name=PHA56_RS14355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14355;old_locus_tag=PHA56_14360 NZ_CP116214.1 Protein Homology CDS 2992483 2992908 . - 0 ID=cds-WP_014229337.1;Parent=gene-PHA56_RS14355;Dbxref=Genbank:WP_014229337.1;Name=WP_014229337.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229337.1;locus_tag=PHA56_RS14355;product=hypothetical protein;protein_id=WP_014229337.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2993109 2993210 . + . ID=gene-PHA56_RS14360;Name=ykgR;gbkey=Gene;gene=ykgR;gene_biotype=protein_coding;locus_tag=PHA56_RS14360 NZ_CP116214.1 Protein Homology CDS 2993109 2993210 . + 0 ID=cds-WP_004137159.1;Parent=gene-PHA56_RS14360;Dbxref=Genbank:WP_004137159.1;Name=WP_004137159.1;gbkey=CDS;gene=ykgR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004102022.1;locus_tag=PHA56_RS14360;product=hypothetical protein;protein_id=WP_004137159.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2993271 2994413 . - . ID=gene-PHA56_RS14365;Name=PHA56_RS14365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14365;old_locus_tag=PHA56_14365 NZ_CP116214.1 Protein Homology CDS 2993271 2994413 . - 0 ID=cds-WP_032695013.1;Parent=gene-PHA56_RS14365;Dbxref=Genbank:WP_032695013.1;Name=WP_032695013.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014838467.1;locus_tag=PHA56_RS14365;product=alpha/beta hydrolase;protein_id=WP_032695013.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2994582 2995616 . + . ID=gene-PHA56_RS14370;Name=PHA56_RS14370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14370;old_locus_tag=PHA56_14370 NZ_CP116214.1 Protein Homology CDS 2994582 2995616 . + 0 ID=cds-WP_014229335.1;Parent=gene-PHA56_RS14370;Dbxref=Genbank:WP_014229335.1;Name=WP_014229335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004102016.1;locus_tag=PHA56_RS14370;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_014229335.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2995801 2996724 . + . ID=gene-PHA56_RS14375;Name=PHA56_RS14375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14375;old_locus_tag=PHA56_14375 NZ_CP116214.1 Protein Homology CDS 2995801 2996724 . + 0 ID=cds-WP_009652232.1;Parent=gene-PHA56_RS14375;Dbxref=Genbank:WP_009652232.1;Name=WP_009652232.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227048.1;locus_tag=PHA56_RS14375;product=TIM barrel protein;protein_id=WP_009652232.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2996739 2997911 . + . ID=gene-PHA56_RS14380;Name=PHA56_RS14380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14380;old_locus_tag=PHA56_14380 NZ_CP116214.1 Protein Homology CDS 2996739 2997911 . + 0 ID=cds-WP_038424499.1;Parent=gene-PHA56_RS14380;Dbxref=Genbank:WP_038424499.1;Name=WP_038424499.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014838466.1;locus_tag=PHA56_RS14380;product=Gfo/Idh/MocA family oxidoreductase;protein_id=WP_038424499.1;transl_table=11 NZ_CP116214.1 cmsearch riboswitch 2998064 2998165 . + . ID=id-NZ_CP116214.1:2998064..2998165;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NZ_CP116214.1 RefSeq gene 2998235 2998930 . + . ID=gene-PHA56_RS14385;Name=PHA56_RS14385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14385;old_locus_tag=PHA56_14385 NZ_CP116214.1 Protein Homology CDS 2998235 2998930 . + 0 ID=cds-WP_038424498.1;Parent=gene-PHA56_RS14385;Dbxref=Genbank:WP_038424498.1;Name=WP_038424498.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227052.1;locus_tag=PHA56_RS14385;product=TenA family protein;protein_id=WP_038424498.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2998927 2999655 . + . ID=gene-PHA56_RS14390;Name=PHA56_RS14390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14390;old_locus_tag=PHA56_14390 NZ_CP116214.1 Protein Homology CDS 2998927 2999655 . + 0 ID=cds-WP_032719075.1;Parent=gene-PHA56_RS14390;Dbxref=Genbank:WP_032719075.1;Name=WP_032719075.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004850830.1;locus_tag=PHA56_RS14390;product=ABC transporter ATP-binding protein;protein_id=WP_032719075.1;transl_table=11 NZ_CP116214.1 RefSeq gene 2999652 3000392 . + . ID=gene-PHA56_RS14395;Name=PHA56_RS14395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14395;old_locus_tag=PHA56_14395 NZ_CP116214.1 Protein Homology CDS 2999652 3000392 . + 0 ID=cds-WP_004850829.1;Parent=gene-PHA56_RS14395;Dbxref=Genbank:WP_004850829.1;Name=WP_004850829.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227054.1;locus_tag=PHA56_RS14395;product=ABC transporter permease;protein_id=WP_004850829.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3000417 3001352 . + . ID=gene-PHA56_RS14400;Name=PHA56_RS14400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14400;old_locus_tag=PHA56_14400 NZ_CP116214.1 Protein Homology CDS 3000417 3001352 . + 0 ID=cds-WP_014838463.1;Parent=gene-PHA56_RS14400;Dbxref=Genbank:WP_014838463.1;Name=WP_014838463.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227055.1;locus_tag=PHA56_RS14400;product=ABC transporter substrate-binding protein;protein_id=WP_014838463.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3001660 3003045 . + . ID=gene-PHA56_RS14405;Name=PHA56_RS14405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14405;old_locus_tag=PHA56_14405 NZ_CP116214.1 Protein Homology CDS 3001660 3003045 . + 0 ID=cds-WP_009652210.1;Parent=gene-PHA56_RS14405;Dbxref=Genbank:WP_009652210.1;Name=WP_009652210.1;Ontology_term=GO:0009058,GO:0008483,GO:0030170;gbkey=CDS;go_function=transaminase activity|0008483||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227056.1;locus_tag=PHA56_RS14405;product=diaminobutyrate--2-oxoglutarate transaminase;protein_id=WP_009652210.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3003055 3004536 . + . ID=gene-PHA56_RS14410;Name=PHA56_RS14410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14410;old_locus_tag=PHA56_14410 NZ_CP116214.1 Protein Homology CDS 3003055 3004536 . + 0 ID=cds-WP_160740681.1;Parent=gene-PHA56_RS14410;Dbxref=Genbank:WP_160740681.1;Name=WP_160740681.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227057.1;locus_tag=PHA56_RS14410;product=aspartate aminotransferase family protein;protein_id=WP_160740681.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3004866 3005654 . - . ID=gene-PHA56_RS14415;Name=PHA56_RS14415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14415;old_locus_tag=PHA56_14415 NZ_CP116214.1 Protein Homology CDS 3004866 3005654 . - 0 ID=cds-WP_014838460.1;Parent=gene-PHA56_RS14415;Dbxref=Genbank:WP_014838460.1;Name=WP_014838460.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014838460.1;locus_tag=PHA56_RS14415;product=SDR family oxidoreductase;protein_id=WP_014838460.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3005771 3006319 . + . ID=gene-PHA56_RS14420;Name=PHA56_RS14420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14420;old_locus_tag=PHA56_14420 NZ_CP116214.1 Protein Homology CDS 3005771 3006319 . + 0 ID=cds-WP_014838459.1;Parent=gene-PHA56_RS14420;Dbxref=Genbank:WP_014838459.1;Name=WP_014838459.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004850815.1;locus_tag=PHA56_RS14420;product=TetR/AcrR family transcriptional regulator;protein_id=WP_014838459.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3006322 3007065 . - . ID=gene-PHA56_RS14425;Name=PHA56_RS14425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14425;old_locus_tag=PHA56_14425 NZ_CP116214.1 Protein Homology CDS 3006322 3007065 . - 0 ID=cds-WP_014229326.1;Parent=gene-PHA56_RS14425;Dbxref=Genbank:WP_014229326.1;Name=WP_014229326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004850813.1;locus_tag=PHA56_RS14425;product=glutamine amidotransferase;protein_id=WP_014229326.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3007170 3009089 . - . ID=gene-PHA56_RS14430;Name=mrdA;gbkey=Gene;gene=mrdA;gene_biotype=protein_coding;locus_tag=PHA56_RS14430;old_locus_tag=PHA56_14430 NZ_CP116214.1 Protein Homology CDS 3007170 3009089 . - 0 ID=cds-WP_014838458.1;Parent=gene-PHA56_RS14430;Dbxref=Genbank:WP_014838458.1;Name=WP_014838458.1;Ontology_term=GO:0009252,GO:0003824;gbkey=CDS;gene=mrdA;go_function=catalytic activity|0003824||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016946773.1;locus_tag=PHA56_RS14430;product=penicillin-binding protein 2;protein_id=WP_014838458.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3009275 3011071 . - . ID=gene-PHA56_RS14435;Name=atzF;gbkey=Gene;gene=atzF;gene_biotype=protein_coding;locus_tag=PHA56_RS14435;old_locus_tag=PHA56_14435 NZ_CP116214.1 Protein Homology CDS 3009275 3011071 . - 0 ID=cds-WP_119834684.1;Parent=gene-PHA56_RS14435;Dbxref=Genbank:WP_119834684.1;Name=WP_119834684.1;Ontology_term=GO:0019627,GO:0004039;gbkey=CDS;gene=atzF;go_function=allophanate hydrolase activity|0004039||IEA;go_process=urea metabolic process|0019627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012968197.1;locus_tag=PHA56_RS14435;product=allophanate hydrolase;protein_id=WP_119834684.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3011068 3014673 . - . ID=gene-PHA56_RS14440;Name=uca;gbkey=Gene;gene=uca;gene_biotype=protein_coding;locus_tag=PHA56_RS14440;old_locus_tag=PHA56_14440 NZ_CP116214.1 Protein Homology CDS 3011068 3014673 . - 0 ID=cds-WP_014838456.1;Parent=gene-PHA56_RS14440;Dbxref=Genbank:WP_014838456.1;Name=WP_014838456.1;Ontology_term=GO:0019627,GO:0004847;gbkey=CDS;gene=uca;go_function=urea carboxylase activity|0004847||IEA;go_process=urea metabolic process|0019627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004120519.1;locus_tag=PHA56_RS14440;product=urea carboxylase;protein_id=WP_014838456.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3014842 3015477 . - . ID=gene-PHA56_RS14445;Name=PHA56_RS14445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14445;old_locus_tag=PHA56_14445 NZ_CP116214.1 Protein Homology CDS 3014842 3015477 . - 0 ID=cds-WP_009652130.1;Parent=gene-PHA56_RS14445;Dbxref=Genbank:WP_009652130.1;Name=WP_009652130.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014700309.1;locus_tag=PHA56_RS14445;product=urea carboxylase-associated family protein;protein_id=WP_009652130.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3015488 3016216 . - . ID=gene-PHA56_RS14450;Name=PHA56_RS14450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14450;old_locus_tag=PHA56_14450 NZ_CP116214.1 Protein Homology CDS 3015488 3016216 . - 0 ID=cds-WP_038424496.1;Parent=gene-PHA56_RS14450;Dbxref=Genbank:WP_038424496.1;Name=WP_038424496.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014333188.1;locus_tag=PHA56_RS14450;product=urea carboxylase-associated family protein;protein_id=WP_038424496.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3016221 3016997 . - . ID=gene-PHA56_RS14455;Name=PHA56_RS14455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14455;old_locus_tag=PHA56_14455 NZ_CP116214.1 Protein Homology CDS 3016221 3016997 . - 0 ID=cds-WP_009652163.1;Parent=gene-PHA56_RS14455;Dbxref=Genbank:WP_009652163.1;Name=WP_009652163.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008804846.1;locus_tag=PHA56_RS14455;product=ABC transporter ATP-binding protein;protein_id=WP_009652163.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3016994 3017809 . - . ID=gene-PHA56_RS14460;Name=PHA56_RS14460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14460;old_locus_tag=PHA56_14460 NZ_CP116214.1 Protein Homology CDS 3016994 3017809 . - 0 ID=cds-WP_038424494.1;Parent=gene-PHA56_RS14460;Dbxref=Genbank:WP_038424494.1;Name=WP_038424494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004850799.1;locus_tag=PHA56_RS14460;product=ABC transporter permease;protein_id=WP_038424494.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3017834 3018892 . - . ID=gene-PHA56_RS14465;Name=PHA56_RS14465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14465;old_locus_tag=PHA56_14465 NZ_CP116214.1 Protein Homology CDS 3017834 3018892 . - 0 ID=cds-WP_038424493.1;Parent=gene-PHA56_RS14465;Dbxref=Genbank:WP_038424493.1;Name=WP_038424493.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012541695.1;locus_tag=PHA56_RS14465;product=putative urea ABC transporter substrate-binding protein;protein_id=WP_038424493.1;transl_table=11 NZ_CP116214.1 cmsearch riboswitch 3018950 3019048 . - . ID=id-NZ_CP116214.1:3018950..3019048;Dbxref=RFAM:RF00442;Note=guanidine-I (ykkC/yxkD leader) riboswitch%3B Guanidine-I riboswitches control genes whose products are involved in modification or pumping out guanidine as a toxic compound from bacteria%3B This is class of guanidine riboswitches is based on the ykkC/yxkD leader.;bound_moiety=guanidine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NZ_CP116214.1 RefSeq gene 3019261 3019863 . - . ID=gene-PHA56_RS14470;Name=PHA56_RS14470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14470;old_locus_tag=PHA56_14470 NZ_CP116214.1 Protein Homology CDS 3019261 3019863 . - 0 ID=cds-WP_014229319.1;Parent=gene-PHA56_RS14470;Dbxref=Genbank:WP_014229319.1;Name=WP_014229319.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229319.1;locus_tag=PHA56_RS14470;product=XRE family transcriptional regulator;protein_id=WP_014229319.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3019847 3020599 . + . ID=gene-PHA56_RS14475;Name=PHA56_RS14475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14475;old_locus_tag=PHA56_14475 NZ_CP116214.1 Protein Homology CDS 3019847 3020599 . + 0 ID=cds-WP_223226792.1;Parent=gene-PHA56_RS14475;Dbxref=Genbank:WP_223226792.1;Name=WP_223226792.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014333111.1;locus_tag=PHA56_RS14475;product=B3/4 domain-containing protein;protein_id=WP_223226792.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3020646 3021278 . - . ID=gene-PHA56_RS14480;Name=PHA56_RS14480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14480;old_locus_tag=PHA56_14480 NZ_CP116214.1 Protein Homology CDS 3020646 3021278 . - 0 ID=cds-WP_014229317.1;Parent=gene-PHA56_RS14480;Dbxref=Genbank:WP_014229317.1;Name=WP_014229317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015366522.1;locus_tag=PHA56_RS14480;product=LysE family translocator;protein_id=WP_014229317.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3021428 3021895 . - . ID=gene-PHA56_RS14485;Name=PHA56_RS14485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14485;old_locus_tag=PHA56_14485 NZ_CP116214.1 Protein Homology CDS 3021428 3021895 . - 0 ID=cds-WP_025108281.1;Parent=gene-PHA56_RS14485;Dbxref=Genbank:WP_025108281.1;Name=WP_025108281.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004850793.1;locus_tag=PHA56_RS14485;product=DMT family transporter;protein_id=WP_025108281.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3021905 3022339 . - . ID=gene-PHA56_RS14490;Name=PHA56_RS14490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14490;old_locus_tag=PHA56_14490 NZ_CP116214.1 Protein Homology CDS 3021905 3022339 . - 0 ID=cds-WP_004850792.1;Parent=gene-PHA56_RS14490;Dbxref=Genbank:WP_004850792.1;Name=WP_004850792.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009652221.1;locus_tag=PHA56_RS14490;product=DMT family transporter;protein_id=WP_004850792.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3022439 3023371 . + . ID=gene-PHA56_RS14495;Name=PHA56_RS14495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14495;old_locus_tag=PHA56_14495 NZ_CP116214.1 Protein Homology CDS 3022439 3023371 . + 0 ID=cds-WP_014229315.1;Parent=gene-PHA56_RS14495;Dbxref=Genbank:WP_014229315.1;Name=WP_014229315.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017145905.1;locus_tag=PHA56_RS14495;product=LysR family transcriptional regulator;protein_id=WP_014229315.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3023637 3025820 . + . ID=gene-PHA56_RS14500;Name=katG;gbkey=Gene;gene=katG;gene_biotype=protein_coding;locus_tag=PHA56_RS14500;old_locus_tag=PHA56_14500 NZ_CP116214.1 Protein Homology CDS 3023637 3025820 . + 0 ID=cds-WP_119834683.1;Parent=gene-PHA56_RS14500;Dbxref=Genbank:WP_119834683.1;Name=WP_119834683.1;Ontology_term=GO:0006979,GO:0004096,GO:0004601;gbkey=CDS;gene=katG;go_function=catalase activity|0004096||IEA,peroxidase activity|0004601||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227075.1;locus_tag=PHA56_RS14500;product=catalase/peroxidase HPI;protein_id=WP_119834683.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3025871 3025957 . - . ID=gene-PHA56_RS14505;Name=mgtU;gbkey=Gene;gene=mgtU;gene_biotype=protein_coding;locus_tag=PHA56_RS14505;old_locus_tag=PHA56_14505 NZ_CP116214.1 Protein Homology CDS 3025871 3025957 . - 0 ID=cds-WP_251009858.1;Parent=gene-PHA56_RS14505;Dbxref=Genbank:WP_251009858.1;Name=WP_251009858.1;gbkey=CDS;gene=mgtU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_251009858.1;locus_tag=PHA56_RS14505;product=magnesium transporter protection protein MgtU;protein_id=WP_251009858.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3025971 3026063 . - . ID=gene-PHA56_RS14510;Name=mgtR;gbkey=Gene;gene=mgtR;gene_biotype=protein_coding;locus_tag=PHA56_RS14510;old_locus_tag=PHA56_14510 NZ_CP116214.1 Protein Homology CDS 3025971 3026063 . - 0 ID=cds-WP_014229313.1;Parent=gene-PHA56_RS14510;Dbxref=Genbank:WP_014229313.1;Name=WP_014229313.1;gbkey=CDS;gene=mgtR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004101989.1;locus_tag=PHA56_RS14510;product=protein MgtR;protein_id=WP_014229313.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3026082 3028814 . - . ID=gene-PHA56_RS14515;Name=mgtA;gbkey=Gene;gene=mgtA;gene_biotype=protein_coding;locus_tag=PHA56_RS14515;old_locus_tag=PHA56_14515 NZ_CP116214.1 Protein Homology CDS 3026082 3028814 . - 0 ID=cds-WP_119834682.1;Parent=gene-PHA56_RS14515;Dbxref=Genbank:WP_119834682.1;Name=WP_119834682.1;Ontology_term=GO:0015693,GO:0015444;gbkey=CDS;gene=mgtA;go_function=P-type magnesium transporter activity|0015444||IEA;go_process=magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462662.1;locus_tag=PHA56_RS14515;product=magnesium-translocating P-type ATPase;protein_id=WP_119834682.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3028970 3029665 . - . ID=gene-PHA56_RS14520;Name=PHA56_RS14520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14520;old_locus_tag=PHA56_14520 NZ_CP116214.1 Protein Homology CDS 3028970 3029665 . - 0 ID=cds-WP_025108277.1;Parent=gene-PHA56_RS14520;Dbxref=Genbank:WP_025108277.1;Name=WP_025108277.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229311.1;locus_tag=PHA56_RS14520;product=MgtC family protein;protein_id=WP_025108277.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3030078 3030590 . - . ID=gene-PHA56_RS14525;Name=PHA56_RS14525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14525;old_locus_tag=PHA56_14525 NZ_CP116214.1 Protein Homology CDS 3030078 3030590 . - 0 ID=cds-WP_014229309.1;Parent=gene-PHA56_RS14525;Dbxref=Genbank:WP_014229309.1;Name=WP_014229309.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227305.1;locus_tag=PHA56_RS14525;product=anti-virulence regulator CigR family protein;protein_id=WP_014229309.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3030879 3032288 . + . ID=gene-PHA56_RS14530;Name=PHA56_RS14530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14530;old_locus_tag=PHA56_14530 NZ_CP116214.1 Protein Homology CDS 3030879 3032288 . + 0 ID=cds-WP_119834680.1;Parent=gene-PHA56_RS14530;Dbxref=Genbank:WP_119834680.1;Name=WP_119834680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227079.1;locus_tag=PHA56_RS14530;product=MFS transporter;protein_id=WP_119834680.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3032306 3033469 . - . ID=gene-PHA56_RS14535;Name=PHA56_RS14535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14535;old_locus_tag=PHA56_14535 NZ_CP116214.1 Protein Homology CDS 3032306 3033469 . - 0 ID=cds-WP_119834679.1;Parent=gene-PHA56_RS14535;Dbxref=Genbank:WP_119834679.1;Name=WP_119834679.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004112935.1;locus_tag=PHA56_RS14535;product=MFS transporter;protein_id=WP_119834679.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3033574 3034473 . + . ID=gene-PHA56_RS14540;Name=PHA56_RS14540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14540;old_locus_tag=PHA56_14540 NZ_CP116214.1 Protein Homology CDS 3033574 3034473 . + 0 ID=cds-WP_038424487.1;Parent=gene-PHA56_RS14540;Dbxref=Genbank:WP_038424487.1;Name=WP_038424487.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009652243.1;locus_tag=PHA56_RS14540;product=LysR family transcriptional regulator;protein_id=WP_038424487.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3034470 3035375 . - . ID=gene-PHA56_RS14545;Name=PHA56_RS14545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14545;old_locus_tag=PHA56_14545 NZ_CP116214.1 Protein Homology CDS 3034470 3035375 . - 0 ID=cds-WP_014229305.1;Parent=gene-PHA56_RS14545;Dbxref=Genbank:WP_014229305.1;Name=WP_014229305.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229305.1;locus_tag=PHA56_RS14545;product=LysR family transcriptional regulator;protein_id=WP_014229305.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3035532 3036332 . + . ID=gene-PHA56_RS14550;Name=PHA56_RS14550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14550;old_locus_tag=PHA56_14550 NZ_CP116214.1 Protein Homology CDS 3035532 3036332 . + 0 ID=cds-WP_042934096.1;Parent=gene-PHA56_RS14550;Dbxref=Genbank:WP_042934096.1;Name=WP_042934096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229304.1;locus_tag=PHA56_RS14550;product=AraC family transcriptional regulator;protein_id=WP_042934096.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3036418 3037035 . + . ID=gene-PHA56_RS14555;Name=PHA56_RS14555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14555;old_locus_tag=PHA56_14555 NZ_CP116214.1 Protein Homology CDS 3036418 3037035 . + 0 ID=cds-WP_119834678.1;Parent=gene-PHA56_RS14555;Dbxref=Genbank:WP_119834678.1;Name=WP_119834678.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009652278.1;locus_tag=PHA56_RS14555;product=LysE family translocator;protein_id=WP_119834678.1;transl_table=11 NZ_CP116214.1 RefSeq pseudogene 3037080 3037508 . - . ID=gene-PHA56_RS14560;Name=PHA56_RS14560;end_range=3037508,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS14560;old_locus_tag=PHA56_14560;partial=true;pseudo=true NZ_CP116214.1 Protein Homology CDS 3037080 3037508 . - 0 ID=cds-PHA56_RS14560;Parent=gene-PHA56_RS14560;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0016491,GO:0043546;end_range=3037508,.;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,molybdopterin cofactor binding|0043546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227089.1;locus_tag=PHA56_RS14560;partial=true;product=molybdopterin dinucleotide binding domain-containing protein;pseudo=true;transl_table=11 NZ_CP116214.1 RefSeq gene 3037765 3038769 . - . ID=gene-PHA56_RS14565;Name=PHA56_RS14565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14565;old_locus_tag=PHA56_14565 NZ_CP116214.1 Protein Homology CDS 3037765 3038769 . - 0 ID=cds-WP_000427623.1-2;Parent=gene-PHA56_RS14565;Dbxref=Genbank:WP_000427623.1;Name=WP_000427623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229637.1;locus_tag=PHA56_RS14565;product=IS110-like element IS4321 family transposase;protein_id=WP_000427623.1;transl_table=11 NZ_CP116214.1 RefSeq pseudogene 3038833 3040707 . - . ID=gene-PHA56_RS14570;Name=PHA56_RS14570;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS14570;old_locus_tag=PHA56_14570;partial=true;pseudo=true;start_range=.,3038833 NZ_CP116214.1 Protein Homology CDS 3038833 3040707 . - 0 ID=cds-PHA56_RS14570;Parent=gene-PHA56_RS14570;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227089.1;locus_tag=PHA56_RS14570;partial=true;product=FdhF/YdeP family oxidoreductase;pseudo=true;start_range=.,3038833;transl_table=11 NZ_CP116214.1 RefSeq gene 3040901 3041818 . - . ID=gene-PHA56_RS14575;Name=PHA56_RS14575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14575;old_locus_tag=PHA56_14575 NZ_CP116214.1 Protein Homology CDS 3040901 3041818 . - 0 ID=cds-WP_014229301.1;Parent=gene-PHA56_RS14575;Dbxref=Genbank:WP_014229301.1;Name=WP_014229301.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227090.1;locus_tag=PHA56_RS14575;product=bestrophin family ion channel;protein_id=WP_014229301.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3042022 3042930 . - . ID=gene-PHA56_RS14580;Name=PHA56_RS14580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14580;old_locus_tag=PHA56_14580 NZ_CP116214.1 Protein Homology CDS 3042022 3042930 . - 0 ID=cds-WP_038424484.1;Parent=gene-PHA56_RS14580;Dbxref=Genbank:WP_038424484.1;Name=WP_038424484.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009652284.1;locus_tag=PHA56_RS14580;product=cation diffusion facilitator family transporter;protein_id=WP_038424484.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3043130 3043999 . - . ID=gene-PHA56_RS14585;Name=PHA56_RS14585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14585;old_locus_tag=PHA56_14585 NZ_CP116214.1 Protein Homology CDS 3043130 3043999 . - 0 ID=cds-WP_076752227.1;Parent=gene-PHA56_RS14585;Dbxref=Genbank:WP_076752227.1;Name=WP_076752227.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017145916.1;locus_tag=PHA56_RS14585;product=oxygenase MpaB family protein;protein_id=WP_076752227.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3044115 3044546 . - . ID=gene-PHA56_RS14590;Name=PHA56_RS14590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14590;old_locus_tag=PHA56_14590 NZ_CP116214.1 Protein Homology CDS 3044115 3044546 . - 0 ID=cds-WP_004138064.1;Parent=gene-PHA56_RS14590;Dbxref=Genbank:WP_004138064.1;Name=WP_004138064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227095.1;locus_tag=PHA56_RS14590;product=OsmC family protein;protein_id=WP_004138064.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3044627 3045106 . - . ID=gene-PHA56_RS14595;Name=PHA56_RS14595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14595;old_locus_tag=PHA56_14595 NZ_CP116214.1 Protein Homology CDS 3044627 3045106 . - 0 ID=cds-WP_014229298.1;Parent=gene-PHA56_RS14595;Dbxref=Genbank:WP_014229298.1;Name=WP_014229298.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009652126.1;locus_tag=PHA56_RS14595;product=GNAT family N-acetyltransferase;protein_id=WP_014229298.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3045106 3046008 . - . ID=gene-PHA56_RS14600;Name=PHA56_RS14600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14600;old_locus_tag=PHA56_14600 NZ_CP116214.1 Protein Homology CDS 3045106 3046008 . - 0 ID=cds-WP_014229297.1;Parent=gene-PHA56_RS14600;Dbxref=Genbank:WP_014229297.1;Name=WP_014229297.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004850754.1;locus_tag=PHA56_RS14600;product=LysR family transcriptional regulator;protein_id=WP_014229297.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3046123 3046974 . + . ID=gene-PHA56_RS14605;Name=PHA56_RS14605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14605;old_locus_tag=PHA56_14605 NZ_CP116214.1 Protein Homology CDS 3046123 3046974 . + 0 ID=cds-WP_038424482.1;Parent=gene-PHA56_RS14605;Dbxref=Genbank:WP_038424482.1;Name=WP_038424482.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227111.1;locus_tag=PHA56_RS14605;product=Vmh family MBL fold metallo-hydrolase;protein_id=WP_038424482.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3047211 3047351 . + . ID=gene-PHA56_RS14610;Name=sra;gbkey=Gene;gene=sra;gene_biotype=protein_coding;locus_tag=PHA56_RS14610;old_locus_tag=PHA56_14610 NZ_CP116214.1 Protein Homology CDS 3047211 3047351 . + 0 ID=cds-WP_004101955.1;Parent=gene-PHA56_RS14610;Dbxref=Genbank:WP_004101955.1;Name=WP_004101955.1;gbkey=CDS;gene=sra;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227112.1;locus_tag=PHA56_RS14610;product=stationary-phase-induced ribosome-associated protein;protein_id=WP_004101955.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3047536 3049233 . + . ID=gene-PHA56_RS14615;Name=PHA56_RS14615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14615;old_locus_tag=PHA56_14615 NZ_CP116214.1 Protein Homology CDS 3047536 3049233 . + 0 ID=cds-WP_014229295.1;Parent=gene-PHA56_RS14615;Dbxref=Genbank:WP_014229295.1;Name=WP_014229295.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227114.1;locus_tag=PHA56_RS14615;product=NAD-dependent malic enzyme;protein_id=WP_014229295.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3049555 3051267 . + . ID=gene-PHA56_RS14620;Name=PHA56_RS14620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14620;old_locus_tag=PHA56_14620 NZ_CP116214.1 Protein Homology CDS 3049555 3051267 . + 0 ID=cds-WP_076752230.1;Parent=gene-PHA56_RS14620;Dbxref=Genbank:WP_076752230.1;Name=WP_076752230.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229294.1;locus_tag=PHA56_RS14620;product=ATP-binding cassette domain-containing protein;protein_id=WP_076752230.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3051305 3051832 . - . ID=gene-PHA56_RS14625;Name=PHA56_RS14625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14625;old_locus_tag=PHA56_14625 NZ_CP116214.1 Protein Homology CDS 3051305 3051832 . - 0 ID=cds-WP_076752232.1;Parent=gene-PHA56_RS14625;Dbxref=Genbank:WP_076752232.1;Name=WP_076752232.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229293.1;locus_tag=PHA56_RS14625;product=GNAT family N-acetyltransferase;protein_id=WP_076752232.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3051889 3052368 . - . ID=gene-PHA56_RS14630;Name=tssD;gbkey=Gene;gene=tssD;gene_biotype=protein_coding;locus_tag=PHA56_RS14630;old_locus_tag=PHA56_14630 NZ_CP116214.1 Protein Homology CDS 3051889 3052368 . - 0 ID=cds-WP_042934095.1;Parent=gene-PHA56_RS14630;Dbxref=Genbank:WP_042934095.1;Name=WP_042934095.1;Ontology_term=GO:0003674;gbkey=CDS;gene=tssD;go_function=molecular_function|0003674||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006810320.1;locus_tag=PHA56_RS14630;product=type VI secretion system tube protein TssD;protein_id=WP_042934095.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3052423 3052611 . - . ID=gene-PHA56_RS14635;Name=PHA56_RS14635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14635;old_locus_tag=PHA56_14635 NZ_CP116214.1 Protein Homology CDS 3052423 3052611 . - 0 ID=cds-WP_042927132.1;Parent=gene-PHA56_RS14635;Dbxref=Genbank:WP_042927132.1;Name=WP_042927132.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002905214.1;locus_tag=PHA56_RS14635;product=hypothetical protein;protein_id=WP_042927132.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3052614 3053306 . - . ID=gene-PHA56_RS14640;Name=PHA56_RS14640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14640;old_locus_tag=PHA56_14640 NZ_CP116214.1 Protein Homology CDS 3052614 3053306 . - 0 ID=cds-WP_076752234.1;Parent=gene-PHA56_RS14640;Dbxref=Genbank:WP_076752234.1;Name=WP_076752234.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004176129.1;locus_tag=PHA56_RS14640;product=hypothetical protein;protein_id=WP_076752234.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3053345 3053806 . - . ID=gene-PHA56_RS14645;Name=PHA56_RS14645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14645;old_locus_tag=PHA56_14645 NZ_CP116214.1 Protein Homology CDS 3053345 3053806 . - 0 ID=cds-WP_076752236.1;Parent=gene-PHA56_RS14645;Dbxref=Genbank:WP_076752236.1;Name=WP_076752236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015872627.1;locus_tag=PHA56_RS14645;product=recombinase family protein;protein_id=WP_076752236.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3054068 3054667 . - . ID=gene-PHA56_RS14650;Name=PHA56_RS14650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14650;old_locus_tag=PHA56_14650 NZ_CP116214.1 Protein Homology CDS 3054068 3054667 . - 0 ID=cds-WP_014229291.1;Parent=gene-PHA56_RS14650;Dbxref=Genbank:WP_014229291.1;Name=WP_014229291.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004180075.1;locus_tag=PHA56_RS14650;product=inorganic diphosphatase;protein_id=WP_014229291.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3054924 3055934 . + . ID=gene-PHA56_RS14655;Name=adhP;gbkey=Gene;gene=adhP;gene_biotype=protein_coding;locus_tag=PHA56_RS14655;old_locus_tag=PHA56_14655 NZ_CP116214.1 Protein Homology CDS 3054924 3055934 . + 0 ID=cds-WP_076752238.1;Parent=gene-PHA56_RS14655;Dbxref=Genbank:WP_076752238.1;Name=WP_076752238.1;gbkey=CDS;gene=adhP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460526.1;locus_tag=PHA56_RS14655;product=alcohol dehydrogenase AdhP;protein_id=WP_076752238.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3055977 3056546 . - . ID=gene-PHA56_RS14660;Name=PHA56_RS14660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14660;old_locus_tag=PHA56_14660 NZ_CP116214.1 Protein Homology CDS 3055977 3056546 . - 0 ID=cds-WP_032719057.1;Parent=gene-PHA56_RS14660;Dbxref=Genbank:WP_032719057.1;Name=WP_032719057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008807634.1;locus_tag=PHA56_RS14660;product=hypothetical protein;protein_id=WP_032719057.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3056754 3058376 . + . ID=gene-PHA56_RS14665;Name=PHA56_RS14665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14665;old_locus_tag=PHA56_14665 NZ_CP116214.1 Protein Homology CDS 3056754 3058376 . + 0 ID=cds-WP_014229289.1;Parent=gene-PHA56_RS14665;Dbxref=Genbank:WP_014229289.1;Name=WP_014229289.1;Ontology_term=GO:0055085,GO:0043190;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227124.1;locus_tag=PHA56_RS14665;product=TIGR04028 family ABC transporter substrate-binding protein;protein_id=WP_014229289.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3058387 3059331 . + . ID=gene-PHA56_RS14670;Name=PHA56_RS14670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14670;old_locus_tag=PHA56_14670 NZ_CP116214.1 Protein Homology CDS 3058387 3059331 . + 0 ID=cds-WP_038424479.1;Parent=gene-PHA56_RS14670;Dbxref=Genbank:WP_038424479.1;Name=WP_038424479.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009652229.1;locus_tag=PHA56_RS14670;product=ABC transporter permease;protein_id=WP_038424479.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3059328 3060179 . + . ID=gene-PHA56_RS14675;Name=PHA56_RS14675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14675;old_locus_tag=PHA56_14675 NZ_CP116214.1 Protein Homology CDS 3059328 3060179 . + 0 ID=cds-WP_038424477.1;Parent=gene-PHA56_RS14675;Dbxref=Genbank:WP_038424477.1;Name=WP_038424477.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004101938.1;locus_tag=PHA56_RS14675;product=ABC transporter permease;protein_id=WP_038424477.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3060176 3061780 . + . ID=gene-PHA56_RS14680;Name=PHA56_RS14680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14680;old_locus_tag=PHA56_14680 NZ_CP116214.1 Protein Homology CDS 3060176 3061780 . + 0 ID=cds-WP_038424476.1;Parent=gene-PHA56_RS14680;Dbxref=Genbank:WP_038424476.1;Name=WP_038424476.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004120627.1;locus_tag=PHA56_RS14680;product=ABC transporter ATP-binding protein;protein_id=WP_038424476.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3061777 3062766 . + . ID=gene-PHA56_RS14685;Name=PHA56_RS14685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14685;old_locus_tag=PHA56_14685 NZ_CP116214.1 Protein Homology CDS 3061777 3062766 . + 0 ID=cds-WP_038424475.1;Parent=gene-PHA56_RS14685;Dbxref=Genbank:WP_038424475.1;Name=WP_038424475.1;Ontology_term=GO:0016705;gbkey=CDS;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen|0016705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016807814.1;locus_tag=PHA56_RS14685;product=putative FMN-dependent luciferase-like monooxygenase;protein_id=WP_038424475.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3062776 3063867 . + . ID=gene-PHA56_RS14690;Name=PHA56_RS14690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14690;old_locus_tag=PHA56_14690 NZ_CP116214.1 Protein Homology CDS 3062776 3063867 . + 0 ID=cds-WP_119834529.1;Parent=gene-PHA56_RS14690;Dbxref=Genbank:WP_119834529.1;Name=WP_119834529.1;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227129.1;locus_tag=PHA56_RS14690;product=alkylhydroperoxidase domain protein;protein_id=WP_119834529.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3063884 3065035 . - . ID=gene-PHA56_RS14695;Name=araJ;gbkey=Gene;gene=araJ;gene_biotype=protein_coding;locus_tag=PHA56_RS14695;old_locus_tag=PHA56_14695 NZ_CP116214.1 Protein Homology CDS 3063884 3065035 . - 0 ID=cds-WP_014229283.1;Parent=gene-PHA56_RS14695;Dbxref=Genbank:WP_014229283.1;Name=WP_014229283.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=araJ;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009652228.1;locus_tag=PHA56_RS14695;product=MFS transporter AraJ;protein_id=WP_014229283.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3065391 3065579 . + . ID=gene-PHA56_RS14700;Name=PHA56_RS14700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14700;old_locus_tag=PHA56_14700 NZ_CP116214.1 Protein Homology CDS 3065391 3065579 . + 0 ID=cds-WP_014229282.1;Parent=gene-PHA56_RS14700;Dbxref=Genbank:WP_014229282.1;Name=WP_014229282.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004138088.1;locus_tag=PHA56_RS14700;product=hypothetical protein;protein_id=WP_014229282.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3065645 3066061 . + . ID=gene-PHA56_RS14705;Name=PHA56_RS14705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14705;old_locus_tag=PHA56_14705 NZ_CP116214.1 Protein Homology CDS 3065645 3066061 . + 0 ID=cds-WP_231719188.1;Parent=gene-PHA56_RS14705;Dbxref=Genbank:WP_231719188.1;Name=WP_231719188.1;Ontology_term=GO:0006276,GO:0008657;gbkey=CDS;go_function=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) inhibitor activity|0008657||IEA;go_process=plasmid maintenance|0006276||IEA;inference=COORDINATES: protein motif:HMM:NF013965.2;locus_tag=PHA56_RS14705;product=CcdB family protein;protein_id=WP_231719188.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3065943 3066599 . - . ID=gene-PHA56_RS14710;Name=fdnI;gbkey=Gene;gene=fdnI;gene_biotype=protein_coding;locus_tag=PHA56_RS14710;old_locus_tag=PHA56_14710 NZ_CP116214.1 Protein Homology CDS 3065943 3066599 . - 0 ID=cds-WP_004120645.1;Parent=gene-PHA56_RS14710;Dbxref=Genbank:WP_004120645.1;Name=WP_004120645.1;gbkey=CDS;gene=fdnI;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227134.1;locus_tag=PHA56_RS14710;product=formate dehydrogenase-N subunit gamma;protein_id=WP_004120645.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3066592 3067476 . - . ID=gene-PHA56_RS14715;Name=fdxH;gbkey=Gene;gene=fdxH;gene_biotype=protein_coding;locus_tag=PHA56_RS14715;old_locus_tag=PHA56_14715 NZ_CP116214.1 Protein Homology CDS 3066592 3067476 . - 0 ID=cds-WP_014838425.1;Parent=gene-PHA56_RS14715;Dbxref=Genbank:WP_014838425.1;Name=WP_014838425.1;Ontology_term=GO:0045333,GO:0008863;gbkey=CDS;gene=fdxH;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA;go_process=cellular respiration|0045333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227135.1;locus_tag=PHA56_RS14715;product=formate dehydrogenase subunit beta;protein_id=WP_014838425.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3067488 3070535 . - . ID=gene-PHA56_RS14720;Name=fdnG;gbkey=Gene;gene=fdnG;gene_biotype=protein_coding;locus_tag=PHA56_RS14720;old_locus_tag=PHA56_14720 NZ_CP116214.1 Protein Homology CDS 3067488 3070535 . - 0 ID=cds-WP_014838424.1;Parent=gene-PHA56_RS14720;Dbxref=Genbank:WP_014838424.1;Name=WP_014838424.1;Ontology_term=GO:0015942,GO:0009326;gbkey=CDS;gene=fdnG;go_component=formate dehydrogenase complex|0009326||IEA;go_process=formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460529.1;locus_tag=PHA56_RS14720;product=formate dehydrogenase-N subunit alpha;protein_id=WP_014838424.1;transl_except=(pos:complement(3069948..3069950)%2Caa:Sec);transl_table=11 NZ_CP116214.1 RefSeq gene 3070762 3071640 . + . ID=gene-PHA56_RS14725;Name=yddG;gbkey=Gene;gene=yddG;gene_biotype=protein_coding;locus_tag=PHA56_RS14725;old_locus_tag=PHA56_14725 NZ_CP116214.1 Protein Homology CDS 3070762 3071640 . + 0 ID=cds-WP_004850709.1;Parent=gene-PHA56_RS14725;Dbxref=Genbank:WP_004850709.1;Name=WP_004850709.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yddG;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227138.1;locus_tag=PHA56_RS14725;product=aromatic amino acid DMT transporter YddG;protein_id=WP_004850709.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3071761 3073251 . - . ID=gene-PHA56_RS14730;Name=PHA56_RS14730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14730;old_locus_tag=PHA56_14730 NZ_CP116214.1 Protein Homology CDS 3071761 3073251 . - 0 ID=cds-WP_004850706.1;Parent=gene-PHA56_RS14730;Dbxref=Genbank:WP_004850706.1;Name=WP_004850706.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004101907.1;locus_tag=PHA56_RS14730;product=MFS transporter;protein_id=WP_004850706.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3073371 3073946 . + . ID=gene-PHA56_RS14735;Name=PHA56_RS14735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14735;old_locus_tag=PHA56_14735 NZ_CP116214.1 Protein Homology CDS 3073371 3073946 . + 0 ID=cds-WP_014229277.1;Parent=gene-PHA56_RS14735;Dbxref=Genbank:WP_014229277.1;Name=WP_014229277.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004200058.1;locus_tag=PHA56_RS14735;product=TetR family transcriptional regulator;protein_id=WP_014229277.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3074136 3075524 . + . ID=gene-PHA56_RS14740;Name=PHA56_RS14740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14740;old_locus_tag=PHA56_14740 NZ_CP116214.1 Protein Homology CDS 3074136 3075524 . + 0 ID=cds-WP_038424473.1;Parent=gene-PHA56_RS14740;Dbxref=Genbank:WP_038424473.1;Name=WP_038424473.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009652133.1;locus_tag=PHA56_RS14740;product=NarK family nitrate/nitrite MFS transporter;protein_id=WP_038424473.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3075618 3079358 . + . ID=gene-PHA56_RS14745;Name=PHA56_RS14745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14745;old_locus_tag=PHA56_14745 NZ_CP116214.1 Protein Homology CDS 3075618 3079358 . + 0 ID=cds-WP_076752240.1;Parent=gene-PHA56_RS14745;Dbxref=Genbank:WP_076752240.1;Name=WP_076752240.1;Ontology_term=GO:0009061,GO:0008940,GO:0009325;gbkey=CDS;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic respiration|0009061||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227150.1;locus_tag=PHA56_RS14745;product=nitrate reductase subunit alpha;protein_id=WP_076752240.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3079355 3080899 . + . ID=gene-PHA56_RS14750;Name=narH;gbkey=Gene;gene=narH;gene_biotype=protein_coding;locus_tag=PHA56_RS14750;old_locus_tag=PHA56_14750 NZ_CP116214.1 Protein Homology CDS 3079355 3080899 . + 0 ID=cds-WP_004101903.1;Parent=gene-PHA56_RS14750;Dbxref=Genbank:WP_004101903.1;Name=WP_004101903.1;Ontology_term=GO:0009061,GO:0008940,GO:0009325;gbkey=CDS;gene=narH;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic respiration|0009061||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415984.1;locus_tag=PHA56_RS14750;product=nitrate reductase subunit beta;protein_id=WP_004101903.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3080899 3081594 . + . ID=gene-PHA56_RS14755;Name=narW;gbkey=Gene;gene=narW;gene_biotype=protein_coding;locus_tag=PHA56_RS14755;old_locus_tag=PHA56_14755 NZ_CP116214.1 Protein Homology CDS 3080899 3081594 . + 0 ID=cds-WP_032693480.1;Parent=gene-PHA56_RS14755;Dbxref=Genbank:WP_032693480.1;Name=WP_032693480.1;Ontology_term=GO:0051131,GO:0051082;gbkey=CDS;gene=narW;go_function=unfolded protein binding|0051082||IEA;go_process=chaperone-mediated protein complex assembly|0051131||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460538.1;locus_tag=PHA56_RS14755;product=nitrate reductase molybdenum cofactor assembly chaperone;protein_id=WP_032693480.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3081591 3082271 . + . ID=gene-PHA56_RS14760;Name=narI;gbkey=Gene;gene=narI;gene_biotype=protein_coding;locus_tag=PHA56_RS14760;old_locus_tag=PHA56_14760 NZ_CP116214.1 Protein Homology CDS 3081591 3082271 . + 0 ID=cds-WP_014838419.1;Parent=gene-PHA56_RS14760;Dbxref=Genbank:WP_014838419.1;Name=WP_014838419.1;Ontology_term=GO:0019645,GO:0008940,GO:0009325;gbkey=CDS;gene=narI;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460539.1;locus_tag=PHA56_RS14760;product=respiratory nitrate reductase subunit gamma;protein_id=WP_014838419.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3082420 3083265 . - . ID=gene-PHA56_RS14765;Name=nhoA;gbkey=Gene;gene=nhoA;gene_biotype=protein_coding;locus_tag=PHA56_RS14765;old_locus_tag=PHA56_14765 NZ_CP116214.1 Protein Homology CDS 3082420 3083265 . - 0 ID=cds-WP_032693479.1;Parent=gene-PHA56_RS14765;Dbxref=Genbank:WP_032693479.1;Name=WP_032693479.1;Ontology_term=GO:0016407;gbkey=CDS;gene=nhoA;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004112839.1;locus_tag=PHA56_RS14765;product=N-hydroxyarylamine O-acetyltransferase;protein_id=WP_032693479.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3083342 3084997 . - . ID=gene-PHA56_RS14770;Name=PHA56_RS14770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14770;old_locus_tag=PHA56_14770 NZ_CP116214.1 Protein Homology CDS 3083342 3084997 . - 0 ID=cds-WP_038424472.1;Parent=gene-PHA56_RS14770;Dbxref=Genbank:WP_038424472.1;Name=WP_038424472.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227156.1;locus_tag=PHA56_RS14770;product=iron ABC transporter permease;protein_id=WP_038424472.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3085279 3086247 . - . ID=gene-PHA56_RS14775;Name=PHA56_RS14775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14775;old_locus_tag=PHA56_14775 NZ_CP116214.1 Protein Homology CDS 3085279 3086247 . - 0 ID=cds-WP_076752242.1;Parent=gene-PHA56_RS14775;Dbxref=Genbank:WP_076752242.1;Name=WP_076752242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227157.1;locus_tag=PHA56_RS14775;product=ABC transporter substrate-binding protein;protein_id=WP_076752242.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3086244 3086948 . - . ID=gene-PHA56_RS14780;Name=PHA56_RS14780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14780;old_locus_tag=PHA56_14780 NZ_CP116214.1 Protein Homology CDS 3086244 3086948 . - 0 ID=cds-WP_162933647.1;Parent=gene-PHA56_RS14780;Dbxref=Genbank:WP_162933647.1;Name=WP_162933647.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016807831.1;locus_tag=PHA56_RS14780;product=ABC transporter ATP-binding protein;protein_id=WP_162933647.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3087159 3087740 . + . ID=gene-PHA56_RS14785;Name=PHA56_RS14785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14785;old_locus_tag=PHA56_14785 NZ_CP116214.1 Protein Homology CDS 3087159 3087740 . + 0 ID=cds-WP_004850682.1;Parent=gene-PHA56_RS14785;Dbxref=Genbank:WP_004850682.1;Name=WP_004850682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009307763.1;locus_tag=PHA56_RS14785;product=flavin reductase family protein;protein_id=WP_004850682.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3087887 3088708 . - . ID=gene-PHA56_RS14790;Name=PHA56_RS14790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14790;old_locus_tag=PHA56_14790 NZ_CP116214.1 Protein Homology CDS 3087887 3088708 . - 0 ID=cds-WP_014229266.1;Parent=gene-PHA56_RS14790;Dbxref=Genbank:WP_014229266.1;Name=WP_014229266.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009652259.1;locus_tag=PHA56_RS14790;product=helix-turn-helix domain-containing protein;protein_id=WP_014229266.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3088912 3090483 . + . ID=gene-PHA56_RS14795;Name=PHA56_RS14795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14795;old_locus_tag=PHA56_14795 NZ_CP116214.1 Protein Homology CDS 3088912 3090483 . + 0 ID=cds-WP_032719041.1;Parent=gene-PHA56_RS14795;Dbxref=Genbank:WP_032719041.1;Name=WP_032719041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227161.1;locus_tag=PHA56_RS14795;product=family 78 glycoside hydrolase catalytic domain;protein_id=WP_032719041.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3090510 3091892 . + . ID=gene-PHA56_RS14800;Name=PHA56_RS14800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14800;old_locus_tag=PHA56_14800 NZ_CP116214.1 Protein Homology CDS 3090510 3091892 . + 0 ID=cds-WP_014229264.1;Parent=gene-PHA56_RS14800;Dbxref=Genbank:WP_014229264.1;Name=WP_014229264.1;Ontology_term=GO:0006812,GO:0008643,GO:0015486,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=glycoside-pentoside-hexuronide:cation symporter activity|0015486||IEA;go_process=monoatomic cation transport|0006812||IEA,carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004850676.1;locus_tag=PHA56_RS14800;product=glycoside-pentoside-hexuronide (GPH):cation symporter;protein_id=WP_014229264.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3091937 3093541 . + . ID=gene-PHA56_RS14805;Name=PHA56_RS14805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14805;old_locus_tag=PHA56_14805 NZ_CP116214.1 Protein Homology CDS 3091937 3093541 . + 0 ID=cds-WP_271292917.1;Parent=gene-PHA56_RS14805;Dbxref=Genbank:WP_271292917.1;Name=WP_271292917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227163.1;locus_tag=PHA56_RS14805;product=carbohydrate porin;protein_id=WP_271292917.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3093790 3094086 . - . ID=gene-PHA56_RS14810;Name=nadS;gbkey=Gene;gene=nadS;gene_biotype=protein_coding;locus_tag=PHA56_RS14810;old_locus_tag=PHA56_14810 NZ_CP116214.1 Protein Homology CDS 3093790 3094086 . - 0 ID=cds-WP_004138143.1;Parent=gene-PHA56_RS14810;Dbxref=Genbank:WP_004138143.1;Name=WP_004138143.1;gbkey=CDS;gene=nadS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227164.1;locus_tag=PHA56_RS14810;product=NadS family protein;protein_id=WP_004138143.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3094162 3094479 . - . ID=gene-PHA56_RS14815;Name=PHA56_RS14815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14815;old_locus_tag=PHA56_14815 NZ_CP116214.1 Protein Homology CDS 3094162 3094479 . - 0 ID=cds-WP_014229262.1;Parent=gene-PHA56_RS14815;Dbxref=Genbank:WP_014229262.1;Name=WP_014229262.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229262.1;locus_tag=PHA56_RS14815;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_014229262.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3094729 3094956 . - . ID=gene-PHA56_RS14820;Name=pptA;gbkey=Gene;gene=pptA;gene_biotype=protein_coding;locus_tag=PHA56_RS14820;old_locus_tag=PHA56_14820 NZ_CP116214.1 Protein Homology CDS 3094729 3094956 . - 0 ID=cds-WP_032693474.1;Parent=gene-PHA56_RS14820;Dbxref=Genbank:WP_032693474.1;Name=WP_032693474.1;gbkey=CDS;gene=pptA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227165.1;locus_tag=PHA56_RS14820;product=tautomerase PptA;protein_id=WP_032693474.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3095026 3095643 . - . ID=gene-PHA56_RS14825;Name=PHA56_RS14825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14825;old_locus_tag=PHA56_14825 NZ_CP116214.1 Protein Homology CDS 3095026 3095643 . - 0 ID=cds-WP_119834528.1;Parent=gene-PHA56_RS14825;Dbxref=Genbank:WP_119834528.1;Name=WP_119834528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227166.1;locus_tag=PHA56_RS14825;product=glutathione S-transferase family protein;protein_id=WP_119834528.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3095769 3096773 . - . ID=gene-PHA56_RS14830;Name=PHA56_RS14830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14830;old_locus_tag=PHA56_14830 NZ_CP116214.1 Protein Homology CDS 3095769 3096773 . - 0 ID=cds-WP_119834527.1;Parent=gene-PHA56_RS14830;Dbxref=Genbank:WP_119834527.1;Name=WP_119834527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004850664.1;locus_tag=PHA56_RS14830;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_119834527.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3097078 3098274 . + . ID=gene-PHA56_RS14835;Name=PHA56_RS14835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14835;old_locus_tag=PHA56_14835 NZ_CP116214.1 Protein Homology CDS 3097078 3098274 . + 0 ID=cds-WP_014229259.1;Parent=gene-PHA56_RS14835;Dbxref=Genbank:WP_014229259.1;Name=WP_014229259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462597.1;locus_tag=PHA56_RS14835;product=L-talarate/galactarate dehydratase;protein_id=WP_014229259.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3098493 3099803 . + . ID=gene-PHA56_RS14840;Name=PHA56_RS14840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14840;old_locus_tag=PHA56_14840 NZ_CP116214.1 Protein Homology CDS 3098493 3099803 . + 0 ID=cds-WP_014229258.1;Parent=gene-PHA56_RS14840;Dbxref=Genbank:WP_014229258.1;Name=WP_014229258.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462598.1;locus_tag=PHA56_RS14840;product=MFS transporter;protein_id=WP_014229258.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3099869 3100762 . - . ID=gene-PHA56_RS14845;Name=PHA56_RS14845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14845;old_locus_tag=PHA56_14845 NZ_CP116214.1 Protein Homology CDS 3099869 3100762 . - 0 ID=cds-WP_029946963.1;Parent=gene-PHA56_RS14845;Dbxref=Genbank:WP_029946963.1;Name=WP_029946963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014070408.1;locus_tag=PHA56_RS14845;product=ABC transporter substrate-binding protein;protein_id=WP_029946963.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3100759 3101538 . - . ID=gene-PHA56_RS14850;Name=PHA56_RS14850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14850;old_locus_tag=PHA56_14850 NZ_CP116214.1 Protein Homology CDS 3100759 3101538 . - 0 ID=cds-WP_014838408.1;Parent=gene-PHA56_RS14850;Dbxref=Genbank:WP_014838408.1;Name=WP_014838408.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227168.1;locus_tag=PHA56_RS14850;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_014838408.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3101522 3102448 . - . ID=gene-PHA56_RS14855;Name=PHA56_RS14855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14855;old_locus_tag=PHA56_14855 NZ_CP116214.1 Protein Homology CDS 3101522 3102448 . - 0 ID=cds-WP_014229255.1;Parent=gene-PHA56_RS14855;Dbxref=Genbank:WP_014229255.1;Name=WP_014229255.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227169.1;locus_tag=PHA56_RS14855;product=amino acid ABC transporter permease;protein_id=WP_014229255.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3102458 3102967 . - . ID=gene-PHA56_RS14860;Name=PHA56_RS14860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14860;old_locus_tag=PHA56_14860 NZ_CP116214.1 Protein Homology CDS 3102458 3102967 . - 0 ID=cds-WP_004120729.1;Parent=gene-PHA56_RS14860;Dbxref=Genbank:WP_004120729.1;Name=WP_004120729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227170.1;locus_tag=PHA56_RS14860;product=GNAT family N-acetyltransferase;protein_id=WP_004120729.1;transl_table=11 NZ_CP116214.1 RefSeq pseudogene 3102979 3105252 . - . ID=gene-PHA56_RS14865;Name=PHA56_RS14865;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS14865;old_locus_tag=PHA56_14865;pseudo=true NZ_CP116214.1 Protein Homology CDS 3102979 3105252 . - 0 ID=cds-PHA56_RS14865;Parent=gene-PHA56_RS14865;Note=This protein belongs to a clade of FMN-dependent monooxygenases%2C within a broader family of flavin-dependent oxidoreductases%2C the luciferase-like monooxygenase (LMM) family%2C some of whose members use coenzyme F420 rather than FMN.%3B internal stop;Ontology_term=GO:0008152,GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227171.1;locus_tag=PHA56_RS14865;product=NtaA/DmoA family FMN-dependent monooxygenase;pseudo=true;transl_table=11 NZ_CP116214.1 RefSeq gene 3105283 3106404 . - . ID=gene-PHA56_RS14870;Name=PHA56_RS14870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14870;old_locus_tag=PHA56_14870 NZ_CP116214.1 Protein Homology CDS 3105283 3106404 . - 0 ID=cds-WP_032719033.1;Parent=gene-PHA56_RS14870;Dbxref=Genbank:WP_032719033.1;Name=WP_032719033.1;Ontology_term=GO:0004180;gbkey=CDS;go_function=carboxypeptidase activity|0004180||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227172.1;locus_tag=PHA56_RS14870;product=amidohydrolase;protein_id=WP_032719033.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3106401 3107402 . - . ID=gene-PHA56_RS14875;Name=PHA56_RS14875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14875;old_locus_tag=PHA56_14875 NZ_CP116214.1 Protein Homology CDS 3106401 3107402 . - 0 ID=cds-WP_014229251.1;Parent=gene-PHA56_RS14875;Dbxref=Genbank:WP_014229251.1;Name=WP_014229251.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016807841.1;locus_tag=PHA56_RS14875;product=LLM class flavin-dependent oxidoreductase;protein_id=WP_014229251.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3107980 3108519 . - . ID=gene-PHA56_RS14880;Name=PHA56_RS14880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14880;old_locus_tag=PHA56_14880 NZ_CP116214.1 Protein Homology CDS 3107980 3108519 . - 0 ID=cds-WP_004850644.1;Parent=gene-PHA56_RS14880;Dbxref=Genbank:WP_004850644.1;Name=WP_004850644.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009652142.1;locus_tag=PHA56_RS14880;product=AAA family ATPase;protein_id=WP_004850644.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3108789 3110249 . + . ID=gene-PHA56_RS14885;Name=ansP;gbkey=Gene;gene=ansP;gene_biotype=protein_coding;locus_tag=PHA56_RS14885;old_locus_tag=PHA56_14885 NZ_CP116214.1 Protein Homology CDS 3108789 3110249 . + 0 ID=cds-WP_025107878.1;Parent=gene-PHA56_RS14885;Dbxref=Genbank:WP_025107878.1;Name=WP_025107878.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;gene=ansP;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229250.1;locus_tag=PHA56_RS14885;product=L-asparagine permease;protein_id=WP_025107878.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3110295 3110516 . - . ID=gene-PHA56_RS14890;Name=PHA56_RS14890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14890;old_locus_tag=PHA56_14890 NZ_CP116214.1 Protein Homology CDS 3110295 3110516 . - 0 ID=cds-WP_009652277.1;Parent=gene-PHA56_RS14890;Dbxref=Genbank:WP_009652277.1;Name=WP_009652277.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002906779.1;locus_tag=PHA56_RS14890;product=YgdI/YgdR family lipoprotein;protein_id=WP_009652277.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3110748 3111809 . - . ID=gene-PHA56_RS14895;Name=PHA56_RS14895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14895;old_locus_tag=PHA56_14895 NZ_CP116214.1 Protein Homology CDS 3110748 3111809 . - 0 ID=cds-WP_014229249.1;Parent=gene-PHA56_RS14895;Dbxref=Genbank:WP_014229249.1;Name=WP_014229249.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227179.1;locus_tag=PHA56_RS14895;product=YncE family protein;protein_id=WP_014229249.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3112073 3114184 . + . ID=gene-PHA56_RS14900;Name=PHA56_RS14900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14900;old_locus_tag=PHA56_14900 NZ_CP116214.1 Protein Homology CDS 3112073 3114184 . + 0 ID=cds-WP_014229248.1;Parent=gene-PHA56_RS14900;Dbxref=Genbank:WP_014229248.1;Name=WP_014229248.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227180.1;locus_tag=PHA56_RS14900;product=TonB-dependent receptor;protein_id=WP_014229248.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3114258 3114557 . - . ID=gene-PHA56_RS14905;Name=PHA56_RS14905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14905;old_locus_tag=PHA56_14905 NZ_CP116214.1 Protein Homology CDS 3114258 3114557 . - 0 ID=cds-WP_271292918.1;Parent=gene-PHA56_RS14905;Dbxref=Genbank:WP_271292918.1;Name=WP_271292918.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015705548.1;locus_tag=PHA56_RS14905;product=DUF406 domain-containing protein;protein_id=WP_271292918.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3114851 3115786 . + . ID=gene-PHA56_RS14910;Name=rihA;gbkey=Gene;gene=rihA;gene_biotype=protein_coding;locus_tag=PHA56_RS14910;old_locus_tag=PHA56_14910 NZ_CP116214.1 Protein Homology CDS 3114851 3115786 . + 0 ID=cds-WP_038424468.1;Parent=gene-PHA56_RS14910;Dbxref=Genbank:WP_038424468.1;Name=WP_038424468.1;Ontology_term=GO:0006206,GO:0050263;gbkey=CDS;gene=rihA;go_function=ribosylpyrimidine nucleosidase activity|0050263||IEA;go_process=pyrimidine nucleobase metabolic process|0006206||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459653.1;locus_tag=PHA56_RS14910;product=pyrimidine-specific ribonucleoside hydrolase RihA;protein_id=WP_038424468.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3115829 3116866 . - . ID=gene-PHA56_RS14915;Name=PHA56_RS14915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14915;old_locus_tag=PHA56_14915 NZ_CP116214.1 Protein Homology CDS 3115829 3116866 . - 0 ID=cds-WP_038424467.1;Parent=gene-PHA56_RS14915;Dbxref=Genbank:WP_038424467.1;Name=WP_038424467.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227185.1;locus_tag=PHA56_RS14915;product=NADP-dependent oxidoreductase;protein_id=WP_038424467.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3116932 3117507 . - . ID=gene-PHA56_RS14920;Name=PHA56_RS14920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14920;old_locus_tag=PHA56_14920 NZ_CP116214.1 Protein Homology CDS 3116932 3117507 . - 0 ID=cds-WP_014838397.1;Parent=gene-PHA56_RS14920;Dbxref=Genbank:WP_014838397.1;Name=WP_014838397.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004861589.1;locus_tag=PHA56_RS14920;product=XRE family transcriptional regulator;protein_id=WP_014838397.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3117669 3118964 . - . ID=gene-PHA56_RS14925;Name=PHA56_RS14925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14925;old_locus_tag=PHA56_14925 NZ_CP116214.1 Protein Homology CDS 3117669 3118964 . - 0 ID=cds-WP_014838396.1;Parent=gene-PHA56_RS14925;Dbxref=Genbank:WP_014838396.1;Name=WP_014838396.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017145950.1;locus_tag=PHA56_RS14925;product=porin;protein_id=WP_014838396.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3119476 3119994 . + . ID=gene-PHA56_RS14930;Name=PHA56_RS14930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14930;old_locus_tag=PHA56_14930 NZ_CP116214.1 Protein Homology CDS 3119476 3119994 . + 0 ID=cds-WP_014838395.1;Parent=gene-PHA56_RS14930;Dbxref=Genbank:WP_014838395.1;Name=WP_014838395.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227187.1;locus_tag=PHA56_RS14930;product=GNAT family N-acetyltransferase;protein_id=WP_014838395.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3119991 3120440 . + . ID=gene-PHA56_RS14935;Name=PHA56_RS14935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14935;old_locus_tag=PHA56_14935 NZ_CP116214.1 Protein Homology CDS 3119991 3120440 . + 0 ID=cds-WP_014838394.1;Parent=gene-PHA56_RS14935;Dbxref=Genbank:WP_014838394.1;Name=WP_014838394.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227188.1;locus_tag=PHA56_RS14935;product=DMT family transporter;protein_id=WP_014838394.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3120449 3120682 . - . ID=gene-PHA56_RS14940;Name=PHA56_RS14940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14940;old_locus_tag=PHA56_14940 NZ_CP116214.1 Protein Homology CDS 3120449 3120682 . - 0 ID=cds-WP_014229241.1;Parent=gene-PHA56_RS14940;Dbxref=Genbank:WP_014229241.1;Name=WP_014229241.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004120770.1;locus_tag=PHA56_RS14940;product=DUF2526 family protein;protein_id=WP_014229241.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3120700 3122298 . - . ID=gene-PHA56_RS14945;Name=PHA56_RS14945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14945;old_locus_tag=PHA56_14945 NZ_CP116214.1 Protein Homology CDS 3120700 3122298 . - 0 ID=cds-WP_014838393.1;Parent=gene-PHA56_RS14945;Dbxref=Genbank:WP_014838393.1;Name=WP_014838393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020324732.1;locus_tag=PHA56_RS14945;product=ABC transporter substrate-binding protein;protein_id=WP_014838393.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3122568 3124001 . + . ID=gene-PHA56_RS14950;Name=PHA56_RS14950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14950;old_locus_tag=PHA56_14950 NZ_CP116214.1 Protein Homology CDS 3122568 3124001 . + 0 ID=cds-WP_014838391.1;Parent=gene-PHA56_RS14950;Dbxref=Genbank:WP_014838391.1;Name=WP_014838391.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227193.1;locus_tag=PHA56_RS14950;product=aldehyde dehydrogenase;protein_id=WP_014838391.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3124005 3125261 . - . ID=gene-PHA56_RS14955;Name=PHA56_RS14955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14955;old_locus_tag=PHA56_14955 NZ_CP116214.1 Protein Homology CDS 3124005 3125261 . - 0 ID=cds-WP_038424466.1;Parent=gene-PHA56_RS14955;Dbxref=Genbank:WP_038424466.1;Name=WP_038424466.1;Ontology_term=GO:0042545,GO:0030599;gbkey=CDS;go_function=pectinesterase activity|0030599||IEA;go_process=cell wall modification|0042545||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014838390.1;locus_tag=PHA56_RS14955;product=putative acyl-CoA thioester hydrolase;protein_id=WP_038424466.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3125342 3126112 . - . ID=gene-PHA56_RS14960;Name=PHA56_RS14960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14960;old_locus_tag=PHA56_14960 NZ_CP116214.1 Protein Homology CDS 3125342 3126112 . - 0 ID=cds-WP_014838389.1;Parent=gene-PHA56_RS14960;Dbxref=Genbank:WP_014838389.1;Name=WP_014838389.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229237.1;locus_tag=PHA56_RS14960;product=alpha/beta hydrolase;protein_id=WP_014838389.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3126184 3126357 . - . ID=gene-PHA56_RS14965;Name=PHA56_RS14965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14965;old_locus_tag=PHA56_14965 NZ_CP116214.1 Protein Homology CDS 3126184 3126357 . - 0 ID=cds-WP_004850604.1;Parent=gene-PHA56_RS14965;Dbxref=Genbank:WP_004850604.1;Name=WP_004850604.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227195.1;locus_tag=PHA56_RS14965;product=GhoT/OrtT family toxin;protein_id=WP_004850604.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3126555 3126647 . + . ID=gene-PHA56_RS14970;Name=yncL;gbkey=Gene;gene=yncL;gene_biotype=protein_coding;locus_tag=PHA56_RS14970;old_locus_tag=PHA56_14970 NZ_CP116214.1 Protein Homology CDS 3126555 3126647 . + 0 ID=cds-WP_071886332.1;Parent=gene-PHA56_RS14970;Dbxref=Genbank:WP_071886332.1;Name=WP_071886332.1;gbkey=CDS;gene=yncL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012968073.1;locus_tag=PHA56_RS14970;product=stress response membrane protein YncL;protein_id=WP_071886332.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3126700 3126984 . - . ID=gene-PHA56_RS14975;Name=PHA56_RS14975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14975;old_locus_tag=PHA56_14975 NZ_CP116214.1 Protein Homology CDS 3126700 3126984 . - 0 ID=cds-WP_014229236.1;Parent=gene-PHA56_RS14975;Dbxref=Genbank:WP_014229236.1;Name=WP_014229236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229236.1;locus_tag=PHA56_RS14975;product=hypothetical protein;protein_id=WP_014229236.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3127544 3127666 . + . ID=gene-PHA56_RS14980;Name=PHA56_RS14980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14980;old_locus_tag=PHA56_14980 NZ_CP116214.1 Protein Homology CDS 3127544 3127666 . + 0 ID=cds-WP_014229235.1;Parent=gene-PHA56_RS14980;Dbxref=Genbank:WP_014229235.1;Name=WP_014229235.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004138919.1;locus_tag=PHA56_RS14980;product=small membrane protein;protein_id=WP_014229235.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3128023 3129450 . - . ID=gene-PHA56_RS14985;Name=patD;gbkey=Gene;gene=patD;gene_biotype=protein_coding;locus_tag=PHA56_RS14985;old_locus_tag=PHA56_14985 NZ_CP116214.1 Protein Homology CDS 3128023 3129450 . - 0 ID=cds-WP_014229234.1;Parent=gene-PHA56_RS14985;Dbxref=Genbank:WP_014229234.1;Name=WP_014229234.1;Ontology_term=GO:0009447,GO:0019145;gbkey=CDS;gene=patD;go_function=aminobutyraldehyde dehydrogenase activity|0019145||IEA;go_process=putrescine catabolic process|0009447||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014838386.1;locus_tag=PHA56_RS14985;product=aminobutyraldehyde dehydrogenase;protein_id=WP_014229234.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3129473 3130279 . - . ID=gene-PHA56_RS14990;Name=PHA56_RS14990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14990;old_locus_tag=PHA56_14990 NZ_CP116214.1 Protein Homology CDS 3129473 3130279 . - 0 ID=cds-WP_032693458.1;Parent=gene-PHA56_RS14990;Dbxref=Genbank:WP_032693458.1;Name=WP_032693458.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227200.1;locus_tag=PHA56_RS14990;product=ABC transporter permease;protein_id=WP_032693458.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3130269 3131198 . - . ID=gene-PHA56_RS14995;Name=PHA56_RS14995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS14995;old_locus_tag=PHA56_14995 NZ_CP116214.1 Protein Homology CDS 3130269 3131198 . - 0 ID=cds-WP_038424464.1;Parent=gene-PHA56_RS14995;Dbxref=Genbank:WP_038424464.1;Name=WP_038424464.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227201.1;locus_tag=PHA56_RS14995;product=ABC transporter permease;protein_id=WP_038424464.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3131200 3132210 . - . ID=gene-PHA56_RS15000;Name=PHA56_RS15000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15000;old_locus_tag=PHA56_15000 NZ_CP116214.1 Protein Homology CDS 3131200 3132210 . - 0 ID=cds-WP_014229231.1;Parent=gene-PHA56_RS15000;Dbxref=Genbank:WP_014229231.1;Name=WP_014229231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004112756.1;locus_tag=PHA56_RS15000;product=ABC transporter ATP-binding protein;protein_id=WP_014229231.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3132230 3133375 . - . ID=gene-PHA56_RS15005;Name=PHA56_RS15005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15005;old_locus_tag=PHA56_15005 NZ_CP116214.1 Protein Homology CDS 3132230 3133375 . - 0 ID=cds-WP_014229230.1;Parent=gene-PHA56_RS15005;Dbxref=Genbank:WP_014229230.1;Name=WP_014229230.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415957.1;locus_tag=PHA56_RS15005;product=ABC transporter substrate-binding protein;protein_id=WP_014229230.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3133816 3135228 . - . ID=gene-PHA56_RS15010;Name=PHA56_RS15010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15010;old_locus_tag=PHA56_15010 NZ_CP116214.1 Protein Homology CDS 3133816 3135228 . - 0 ID=cds-WP_004850592.1;Parent=gene-PHA56_RS15010;Dbxref=Genbank:WP_004850592.1;Name=WP_004850592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227204.1;locus_tag=PHA56_RS15010;product=PLP-dependent aminotransferase family protein;protein_id=WP_004850592.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3136012 3137409 . + . ID=gene-PHA56_RS15015;Name=PHA56_RS15015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15015;old_locus_tag=PHA56_15015 NZ_CP116214.1 Protein Homology CDS 3136012 3137409 . + 0 ID=cds-WP_014229228.1;Parent=gene-PHA56_RS15015;Dbxref=Genbank:WP_014229228.1;Name=WP_014229228.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004138930.1;locus_tag=PHA56_RS15015;product=cytochrome ubiquinol oxidase subunit I;protein_id=WP_014229228.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3137409 3138419 . + . ID=gene-PHA56_RS15020;Name=cydB;gbkey=Gene;gene=cydB;gene_biotype=protein_coding;locus_tag=PHA56_RS15020;old_locus_tag=PHA56_15020 NZ_CP116214.1 Protein Homology CDS 3137409 3138419 . + 0 ID=cds-WP_032719024.1;Parent=gene-PHA56_RS15020;Dbxref=Genbank:WP_032719024.1;Name=WP_032719024.1;Ontology_term=GO:0016682;gbkey=CDS;gene=cydB;go_function=oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227206.1;locus_tag=PHA56_RS15020;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_032719024.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3138419 3138544 . + . ID=gene-PHA56_RS15025;Name=PHA56_RS15025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15025;old_locus_tag=PHA56_15025 NZ_CP116214.1 Protein Homology CDS 3138419 3138544 . + 0 ID=cds-WP_004850587.1;Parent=gene-PHA56_RS15025;Dbxref=Genbank:WP_004850587.1;Name=WP_004850587.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004120829.1;locus_tag=PHA56_RS15025;product=DUF2474 domain-containing protein;protein_id=WP_004850587.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3138714 3138947 . + . ID=gene-PHA56_RS15030;Name=PHA56_RS15030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15030;old_locus_tag=PHA56_15030 NZ_CP116214.1 Protein Homology CDS 3138714 3138947 . + 0 ID=cds-WP_004850586.1;Parent=gene-PHA56_RS15030;Dbxref=Genbank:WP_004850586.1;Name=WP_004850586.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229225.1;locus_tag=PHA56_RS15030;product=DUF2554 family protein;protein_id=WP_004850586.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3138959 3140923 . - . ID=gene-PHA56_RS15035;Name=PHA56_RS15035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15035;old_locus_tag=PHA56_15035 NZ_CP116214.1 Protein Homology CDS 3138959 3140923 . - 0 ID=cds-WP_032693487.1;Parent=gene-PHA56_RS15035;Dbxref=Genbank:WP_032693487.1;Name=WP_032693487.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227210.1;locus_tag=PHA56_RS15035;product=U32 family peptidase;protein_id=WP_032693487.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3141172 3141702 . - . ID=gene-PHA56_RS15040;Name=PHA56_RS15040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15040;old_locus_tag=PHA56_15040 NZ_CP116214.1 Protein Homology CDS 3141172 3141702 . - 0 ID=cds-WP_032719023.1;Parent=gene-PHA56_RS15040;Dbxref=Genbank:WP_032719023.1;Name=WP_032719023.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014838377.1;locus_tag=PHA56_RS15040;product=XRE family transcriptional regulator;protein_id=WP_032719023.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3141882 3143048 . + . ID=gene-PHA56_RS15045;Name=PHA56_RS15045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15045;old_locus_tag=PHA56_15045 NZ_CP116214.1 Protein Homology CDS 3141882 3143048 . + 0 ID=cds-WP_014229222.1;Parent=gene-PHA56_RS15045;Dbxref=Genbank:WP_014229222.1;Name=WP_014229222.1;Ontology_term=GO:0042919,GO:0042925,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=benzoate transmembrane transporter activity|0042925||IEA;go_process=benzoate transport|0042919||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004101798.1;locus_tag=PHA56_RS15045;product=benzoate/H(+) symporter BenE family transporter;protein_id=WP_014229222.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3143028 3143894 . - . ID=gene-PHA56_RS15050;Name=PHA56_RS15050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15050;old_locus_tag=PHA56_15050 NZ_CP116214.1 Protein Homology CDS 3143028 3143894 . - 0 ID=cds-WP_014229221.1;Parent=gene-PHA56_RS15050;Dbxref=Genbank:WP_014229221.1;Name=WP_014229221.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004120845.1;locus_tag=PHA56_RS15050;product=AraC family transcriptional regulator;protein_id=WP_014229221.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3144077 3144994 . + . ID=gene-PHA56_RS15055;Name=PHA56_RS15055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15055;old_locus_tag=PHA56_15055 NZ_CP116214.1 Protein Homology CDS 3144077 3144994 . + 0 ID=cds-WP_014229220.1;Parent=gene-PHA56_RS15055;Dbxref=Genbank:WP_014229220.1;Name=WP_014229220.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014838374.1;locus_tag=PHA56_RS15055;product=EamA family transporter;protein_id=WP_014229220.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3145070 3145738 . - . ID=gene-PHA56_RS15060;Name=PHA56_RS15060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15060;old_locus_tag=PHA56_15060 NZ_CP116214.1 Protein Homology CDS 3145070 3145738 . - 0 ID=cds-WP_014229219.1;Parent=gene-PHA56_RS15060;Dbxref=Genbank:WP_014229219.1;Name=WP_014229219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227217.1;locus_tag=PHA56_RS15060;product=DUF3313 domain-containing protein;protein_id=WP_014229219.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3145878 3147470 . - . ID=gene-PHA56_RS15065;Name=PHA56_RS15065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15065;old_locus_tag=PHA56_15065 NZ_CP116214.1 Protein Homology CDS 3145878 3147470 . - 0 ID=cds-WP_014229218.1;Parent=gene-PHA56_RS15065;Dbxref=Genbank:WP_014229218.1;Name=WP_014229218.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016807860.1;locus_tag=PHA56_RS15065;product=ABC transporter substrate-binding protein;protein_id=WP_014229218.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3147584 3148813 . + . ID=gene-PHA56_RS15070;Name=pepT;gbkey=Gene;gene=pepT;gene_biotype=protein_coding;locus_tag=PHA56_RS15070;old_locus_tag=PHA56_15070 NZ_CP116214.1 Protein Homology CDS 3147584 3148813 . + 0 ID=cds-WP_014229217.1;Parent=gene-PHA56_RS15070;Dbxref=Genbank:WP_014229217.1;Name=WP_014229217.1;Ontology_term=GO:0006508,GO:0045148;gbkey=CDS;gene=pepT;go_function=tripeptide aminopeptidase activity|0045148||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015584431.1;locus_tag=PHA56_RS15070;product=peptidase T;protein_id=WP_014229217.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3148810 3149406 . - . ID=gene-PHA56_RS15075;Name=tehB;gbkey=Gene;gene=tehB;gene_biotype=protein_coding;locus_tag=PHA56_RS15075;old_locus_tag=PHA56_15075 NZ_CP116214.1 Protein Homology CDS 3148810 3149406 . - 0 ID=cds-WP_032693454.1;Parent=gene-PHA56_RS15075;Dbxref=Genbank:WP_032693454.1;Name=WP_032693454.1;Ontology_term=GO:0046690,GO:0008757;gbkey=CDS;gene=tehB;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=response to tellurium ion|0046690||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227218.1;locus_tag=PHA56_RS15075;product=tellurite resistance methyltransferase TehB;protein_id=WP_032693454.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3149409 3150407 . - . ID=gene-PHA56_RS15080;Name=tehA;gbkey=Gene;gene=tehA;gene_biotype=protein_coding;locus_tag=PHA56_RS15080;old_locus_tag=PHA56_15080 NZ_CP116214.1 Protein Homology CDS 3149409 3150407 . - 0 ID=cds-WP_032693453.1;Parent=gene-PHA56_RS15080;Dbxref=Genbank:WP_032693453.1;Name=WP_032693453.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=tehA;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014838370.1;locus_tag=PHA56_RS15080;product=dicarboxylate transporter/tellurite-resistance protein TehA;protein_id=WP_032693453.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3150518 3151498 . + . ID=gene-PHA56_RS15085;Name=ydcK;gbkey=Gene;gene=ydcK;gene_biotype=protein_coding;locus_tag=PHA56_RS15085;old_locus_tag=PHA56_15085 NZ_CP116214.1 Protein Homology CDS 3150518 3151498 . + 0 ID=cds-WP_014838369.1;Parent=gene-PHA56_RS15085;Dbxref=Genbank:WP_014838369.1;Name=WP_014838369.1;gbkey=CDS;gene=ydcK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002907485.1;locus_tag=PHA56_RS15085;product=YdcK family protein;protein_id=WP_014838369.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3151621 3152205 . - . ID=gene-PHA56_RS15090;Name=rimL;gbkey=Gene;gene=rimL;gene_biotype=protein_coding;locus_tag=PHA56_RS15090;old_locus_tag=PHA56_15090 NZ_CP116214.1 Protein Homology CDS 3151621 3152205 . - 0 ID=cds-WP_032693451.1;Parent=gene-PHA56_RS15090;Dbxref=Genbank:WP_032693451.1;Name=WP_032693451.1;gbkey=CDS;gene=rimL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004101779.1;locus_tag=PHA56_RS15090;product=50S ribosomal protein L7/L12-serine acetyltransferase;protein_id=WP_032693451.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3152281 3153936 . - . ID=gene-PHA56_RS15095;Name=PHA56_RS15095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15095;old_locus_tag=PHA56_15095 NZ_CP116214.1 Protein Homology CDS 3152281 3153936 . - 0 ID=cds-WP_004850560.1;Parent=gene-PHA56_RS15095;Dbxref=Genbank:WP_004850560.1;Name=WP_004850560.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227222.1;locus_tag=PHA56_RS15095;product=glucan biosynthesis protein;protein_id=WP_004850560.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3154269 3155777 . - . ID=gene-PHA56_RS15100;Name=PHA56_RS15100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15100;old_locus_tag=PHA56_15100 NZ_CP116214.1 Protein Homology CDS 3154269 3155777 . - 0 ID=cds-WP_014229212.1;Parent=gene-PHA56_RS15100;Dbxref=Genbank:WP_014229212.1;Name=WP_014229212.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227224.1;locus_tag=PHA56_RS15100;product=carboxylesterase/lipase family protein;protein_id=WP_014229212.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3155820 3157163 . - . ID=gene-PHA56_RS15105;Name=PHA56_RS15105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15105;old_locus_tag=PHA56_15105 NZ_CP116214.1 Protein Homology CDS 3155820 3157163 . - 0 ID=cds-WP_004850554.1;Parent=gene-PHA56_RS15105;Dbxref=Genbank:WP_004850554.1;Name=WP_004850554.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227225.1;locus_tag=PHA56_RS15105;product=VOC family protein;protein_id=WP_004850554.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3157403 3158143 . + . ID=gene-PHA56_RS15110;Name=pcaH;gbkey=Gene;gene=pcaH;gene_biotype=protein_coding;locus_tag=PHA56_RS15110;old_locus_tag=PHA56_15110 NZ_CP116214.1 Protein Homology CDS 3157403 3158143 . + 0 ID=cds-WP_004850552.1;Parent=gene-PHA56_RS15110;Dbxref=Genbank:WP_004850552.1;Name=WP_004850552.1;Ontology_term=GO:0046278,GO:0018578;gbkey=CDS;gene=pcaH;go_function=protocatechuate 3%2C4-dioxygenase activity|0018578||IEA;go_process=3%2C4-dihydroxybenzoate metabolic process|0046278||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227226.1;locus_tag=PHA56_RS15110;product=protocatechuate 3%2C4-dioxygenase subunit beta;protein_id=WP_004850552.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3158140 3158760 . + . ID=gene-PHA56_RS15115;Name=pcaG;gbkey=Gene;gene=pcaG;gene_biotype=protein_coding;locus_tag=PHA56_RS15115;old_locus_tag=PHA56_15115 NZ_CP116214.1 Protein Homology CDS 3158140 3158760 . + 0 ID=cds-WP_004850549.1;Parent=gene-PHA56_RS15115;Dbxref=Genbank:WP_004850549.1;Name=WP_004850549.1;Ontology_term=GO:0046278,GO:0018578;gbkey=CDS;gene=pcaG;go_function=protocatechuate 3%2C4-dioxygenase activity|0018578||IEA;go_process=3%2C4-dihydroxybenzoate metabolic process|0046278||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227227.1;locus_tag=PHA56_RS15115;product=protocatechuate 3%2C4-dioxygenase subunit alpha;protein_id=WP_004850549.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3158933 3159856 . + . ID=gene-PHA56_RS15120;Name=PHA56_RS15120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15120;old_locus_tag=PHA56_15120 NZ_CP116214.1 Protein Homology CDS 3158933 3159856 . + 0 ID=cds-WP_004850547.1;Parent=gene-PHA56_RS15120;Dbxref=Genbank:WP_004850547.1;Name=WP_004850547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460584.1;locus_tag=PHA56_RS15120;product=LysR substrate-binding domain-containing protein;protein_id=WP_004850547.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3160149 3162521 . + . ID=gene-PHA56_RS15125;Name=PHA56_RS15125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15125;old_locus_tag=PHA56_15125 NZ_CP116214.1 Protein Homology CDS 3160149 3162521 . + 0 ID=cds-WP_032693450.1;Parent=gene-PHA56_RS15125;Dbxref=Genbank:WP_032693450.1;Name=WP_032693450.1;Ontology_term=GO:0016491,GO:0048038,GO:0016020,GO:0030288;gbkey=CDS;go_component=membrane|0016020||IEA,outer membrane-bounded periplasmic space|0030288||IEA;go_function=oxidoreductase activity|0016491||IEA,quinone binding|0048038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004861428.1;locus_tag=PHA56_RS15125;product=membrane-bound PQQ-dependent dehydrogenase%2C glucose/quinate/shikimate family;protein_id=WP_032693450.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3162686 3162961 . + . ID=gene-PHA56_RS15130;Name=PHA56_RS15130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15130;old_locus_tag=PHA56_15130 NZ_CP116214.1 Protein Homology CDS 3162686 3162961 . + 0 ID=cds-WP_014229210.1;Parent=gene-PHA56_RS15130;Dbxref=Genbank:WP_014229210.1;Name=WP_014229210.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009653055.1;locus_tag=PHA56_RS15130;product=hypothetical protein;protein_id=WP_014229210.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3163014 3164132 . - . ID=gene-PHA56_RS15135;Name=PHA56_RS15135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15135;old_locus_tag=PHA56_15135 NZ_CP116214.1 Protein Homology CDS 3163014 3164132 . - 0 ID=cds-WP_014229209.1;Parent=gene-PHA56_RS15135;Dbxref=Genbank:WP_014229209.1;Name=WP_014229209.1;Ontology_term=GO:0006113,GO:0009404,GO:0004024,GO:0051903;gbkey=CDS;go_function=alcohol dehydrogenase activity%2C zinc-dependent|0004024||IEA,S-(hydroxymethyl)glutathione dehydrogenase activity|0051903||IEA;go_process=fermentation|0006113||IEA,toxin metabolic process|0009404||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460586.1;locus_tag=PHA56_RS15135;product=S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase;protein_id=WP_014229209.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3164155 3164430 . - . ID=gene-PHA56_RS15140;Name=PHA56_RS15140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15140;old_locus_tag=PHA56_15140 NZ_CP116214.1 Protein Homology CDS 3164155 3164430 . - 0 ID=cds-WP_004101746.1;Parent=gene-PHA56_RS15140;Dbxref=Genbank:WP_004101746.1;Name=WP_004101746.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227231.1;locus_tag=PHA56_RS15140;product=metal/formaldehyde-sensitive transcriptional repressor;protein_id=WP_004101746.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3164535 3165008 . - . ID=gene-PHA56_RS15145;Name=PHA56_RS15145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15145;old_locus_tag=PHA56_15145 NZ_CP116214.1 Protein Homology CDS 3164535 3165008 . - 0 ID=cds-WP_014229208.1;Parent=gene-PHA56_RS15145;Dbxref=Genbank:WP_014229208.1;Name=WP_014229208.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004101741.1;locus_tag=PHA56_RS15145;product=GNAT family N-acetyltransferase;protein_id=WP_014229208.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3165102 3165629 . - . ID=gene-PHA56_RS15150;Name=cybB;gbkey=Gene;gene=cybB;gene_biotype=protein_coding;locus_tag=PHA56_RS15150;old_locus_tag=PHA56_15150 NZ_CP116214.1 Protein Homology CDS 3165102 3165629 . - 0 ID=cds-WP_014229207.1;Parent=gene-PHA56_RS15150;Dbxref=Genbank:WP_014229207.1;Name=WP_014229207.1;Ontology_term=GO:0022904,GO:0009055,GO:0016020;gbkey=CDS;gene=cybB;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227232.1;locus_tag=PHA56_RS15150;product=cytochrome b561;protein_id=WP_014229207.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3165854 3166096 . + . ID=gene-PHA56_RS15155;Name=PHA56_RS15155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15155;old_locus_tag=PHA56_15155 NZ_CP116214.1 Protein Homology CDS 3165854 3166096 . + 0 ID=cds-WP_004101739.1;Parent=gene-PHA56_RS15155;Dbxref=Genbank:WP_004101739.1;Name=WP_004101739.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226363.1;locus_tag=PHA56_RS15155;product=DinI family protein;protein_id=WP_004101739.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3166118 3166282 . + . ID=gene-PHA56_RS15160;Name=PHA56_RS15160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15160;old_locus_tag=PHA56_15160 NZ_CP116214.1 Protein Homology CDS 3166118 3166282 . + 0 ID=cds-WP_004850538.1;Parent=gene-PHA56_RS15160;Dbxref=Genbank:WP_004850538.1;Name=WP_004850538.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004850538.1;locus_tag=PHA56_RS15160;product=hypothetical protein;protein_id=WP_004850538.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3166403 3166600 . - . ID=gene-PHA56_RS15165;Name=PHA56_RS15165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15165;old_locus_tag=PHA56_15165 NZ_CP116214.1 Protein Homology CDS 3166403 3166600 . - 0 ID=cds-WP_014229206.1;Parent=gene-PHA56_RS15165;Dbxref=Genbank:WP_014229206.1;Name=WP_014229206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003856931.1;locus_tag=PHA56_RS15165;product=hypothetical protein;protein_id=WP_014229206.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3166891 3167094 . + . ID=gene-PHA56_RS15170;Name=ydfZ;gbkey=Gene;gene=ydfZ;gene_biotype=protein_coding;locus_tag=PHA56_RS15170;old_locus_tag=PHA56_15170 NZ_CP116214.1 Protein Homology CDS 3166891 3167094 . + 0 ID=cds-WP_004850536.1;Parent=gene-PHA56_RS15170;Dbxref=Genbank:WP_004850536.1;Name=WP_004850536.1;gbkey=CDS;gene=ydfZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014883679.1;locus_tag=PHA56_RS15170;product=putative selenium delivery protein YdfZ;protein_id=WP_004850536.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3167160 3168131 . - . ID=gene-PHA56_RS15175;Name=PHA56_RS15175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15175;old_locus_tag=PHA56_15175 NZ_CP116214.1 Protein Homology CDS 3167160 3168131 . - 0 ID=cds-WP_014229205.1;Parent=gene-PHA56_RS15175;Dbxref=Genbank:WP_014229205.1;Name=WP_014229205.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227808.1;locus_tag=PHA56_RS15175;product=sensor domain-containing diguanylate cyclase;protein_id=WP_014229205.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3168264 3169187 . - . ID=gene-PHA56_RS15180;Name=PHA56_RS15180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15180;old_locus_tag=PHA56_15180 NZ_CP116214.1 Protein Homology CDS 3168264 3169187 . - 0 ID=cds-WP_271292984.1;Parent=gene-PHA56_RS15180;Dbxref=Genbank:WP_271292984.1;Name=WP_271292984.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009653075.1;locus_tag=PHA56_RS15180;product=LysR family transcriptional regulator;protein_id=WP_271292984.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3169277 3169771 . + . ID=gene-PHA56_RS15185;Name=PHA56_RS15185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15185;old_locus_tag=PHA56_15185 NZ_CP116214.1 Protein Homology CDS 3169277 3169771 . + 0 ID=cds-WP_014838362.1;Parent=gene-PHA56_RS15185;Dbxref=Genbank:WP_014838362.1;Name=WP_014838362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014838362.1;locus_tag=PHA56_RS15185;product=GNAT family N-acetyltransferase;protein_id=WP_014838362.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3170027 3171025 . + . ID=gene-PHA56_RS15190;Name=gap;gbkey=Gene;gene=gap;gene_biotype=protein_coding;locus_tag=PHA56_RS15190;old_locus_tag=PHA56_15190 NZ_CP116214.1 Protein Homology CDS 3170027 3171025 . + 0 ID=cds-WP_032693448.1;Parent=gene-PHA56_RS15190;Dbxref=Genbank:WP_032693448.1;Name=WP_032693448.1;Ontology_term=GO:0006094,GO:0006096,GO:0019682;gbkey=CDS;gene=gap;go_process=gluconeogenesis|0006094||IEA,glycolytic process|0006096||IEA,glyceraldehyde-3-phosphate metabolic process|0019682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226706.1;locus_tag=PHA56_RS15190;product=type I glyceraldehyde-3-phosphate dehydrogenase;protein_id=WP_032693448.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3171194 3172633 . - . ID=gene-PHA56_RS15195;Name=aldA;gbkey=Gene;gene=aldA;gene_biotype=protein_coding;locus_tag=PHA56_RS15195;old_locus_tag=PHA56_15195 NZ_CP116214.1 Protein Homology CDS 3171194 3172633 . - 0 ID=cds-WP_032693447.1;Parent=gene-PHA56_RS15195;Dbxref=Genbank:WP_032693447.1;Name=WP_032693447.1;Ontology_term=GO:0016620;gbkey=CDS;gene=aldA;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310048.1;locus_tag=PHA56_RS15195;product=aldehyde dehydrogenase;protein_id=WP_032693447.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3172905 3173696 . - . ID=gene-PHA56_RS15200;Name=PHA56_RS15200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15200;old_locus_tag=PHA56_15200 NZ_CP116214.1 Protein Homology CDS 3172905 3173696 . - 0 ID=cds-WP_014229201.1;Parent=gene-PHA56_RS15200;Dbxref=Genbank:WP_014229201.1;Name=WP_014229201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009653015.1;locus_tag=PHA56_RS15200;product=YdcF family protein;protein_id=WP_014229201.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3174108 3175382 . + . ID=gene-PHA56_RS15205;Name=PHA56_RS15205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15205;old_locus_tag=PHA56_15205 NZ_CP116214.1 Protein Homology CDS 3174108 3175382 . + 0 ID=cds-WP_014229200.1;Parent=gene-PHA56_RS15205;Dbxref=Genbank:WP_014229200.1;Name=WP_014229200.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122303.1;locus_tag=PHA56_RS15205;product=Glu/Leu/Phe/Val dehydrogenase;protein_id=WP_014229200.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3175560 3175991 . + . ID=gene-PHA56_RS15210;Name=PHA56_RS15210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15210;old_locus_tag=PHA56_15210 NZ_CP116214.1 Protein Homology CDS 3175560 3175991 . + 0 ID=cds-WP_014229199.1;Parent=gene-PHA56_RS15210;Dbxref=Genbank:WP_014229199.1;Name=WP_014229199.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226689.1;locus_tag=PHA56_RS15210;product=MarR family transcriptional regulator;protein_id=WP_014229199.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3175991 3177643 . + . ID=gene-PHA56_RS15215;Name=PHA56_RS15215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15215;old_locus_tag=PHA56_15215 NZ_CP116214.1 Protein Homology CDS 3175991 3177643 . + 0 ID=cds-WP_014229198.1;Parent=gene-PHA56_RS15215;Dbxref=Genbank:WP_014229198.1;Name=WP_014229198.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226688.1;locus_tag=PHA56_RS15215;product=MFS transporter;protein_id=WP_014229198.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3177666 3178751 . + . ID=gene-PHA56_RS15220;Name=PHA56_RS15220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15220;old_locus_tag=PHA56_15220 NZ_CP116214.1 Protein Homology CDS 3177666 3178751 . + 0 ID=cds-WP_038424461.1;Parent=gene-PHA56_RS15220;Dbxref=Genbank:WP_038424461.1;Name=WP_038424461.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017145979.1;locus_tag=PHA56_RS15220;product=HlyD family secretion protein;protein_id=WP_038424461.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3178748 3180127 . + . ID=gene-PHA56_RS15225;Name=PHA56_RS15225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15225;old_locus_tag=PHA56_15225 NZ_CP116214.1 Protein Homology CDS 3178748 3180127 . + 0 ID=cds-WP_014229196.1;Parent=gene-PHA56_RS15225;Dbxref=Genbank:WP_014229196.1;Name=WP_014229196.1;Ontology_term=GO:0006810,GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009653068.1;locus_tag=PHA56_RS15225;product=efflux transporter outer membrane subunit;protein_id=WP_014229196.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3180143 3180802 . + . ID=gene-PHA56_RS15230;Name=PHA56_RS15230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15230;old_locus_tag=PHA56_15230 NZ_CP116214.1 Protein Homology CDS 3180143 3180802 . + 0 ID=cds-WP_038424460.1;Parent=gene-PHA56_RS15230;Dbxref=Genbank:WP_038424460.1;Name=WP_038424460.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009653020.1;locus_tag=PHA56_RS15230;product=O-methyltransferase;protein_id=WP_038424460.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3180851 3184696 . - . ID=gene-PHA56_RS15235;Name=hrpA;gbkey=Gene;gene=hrpA;gene_biotype=protein_coding;locus_tag=PHA56_RS15235;old_locus_tag=PHA56_15235 NZ_CP116214.1 Protein Homology CDS 3180851 3184696 . - 0 ID=cds-WP_236039737.1;Parent=gene-PHA56_RS15235;Dbxref=Genbank:WP_236039737.1;Name=WP_236039737.1;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=hrpA;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004120933.1;locus_tag=PHA56_RS15235;product=ATP-dependent RNA helicase HrpA;protein_id=WP_236039737.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3184958 3185563 . + . ID=gene-PHA56_RS15240;Name=azoR;gbkey=Gene;gene=azoR;gene_biotype=protein_coding;locus_tag=PHA56_RS15240;old_locus_tag=PHA56_15240 NZ_CP116214.1 Protein Homology CDS 3184958 3185563 . + 0 ID=cds-WP_014229193.1;Parent=gene-PHA56_RS15240;Dbxref=Genbank:WP_014229193.1;Name=WP_014229193.1;gbkey=CDS;gene=azoR;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226683.1;locus_tag=PHA56_RS15240;product=FMN-dependent NADH-azoreductase;protein_id=WP_014229193.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3185601 3186011 . - . ID=gene-PHA56_RS15245;Name=PHA56_RS15245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15245;old_locus_tag=PHA56_15245 NZ_CP116214.1 Protein Homology CDS 3185601 3186011 . - 0 ID=cds-WP_086074107.1;Parent=gene-PHA56_RS15245;Dbxref=Genbank:WP_086074107.1;Name=WP_086074107.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460602.1;locus_tag=PHA56_RS15245;product=GFA family protein;protein_id=WP_086074107.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3186019 3186615 . - . ID=gene-PHA56_RS15250;Name=paaY;gbkey=Gene;gene=paaY;gene_biotype=protein_coding;locus_tag=PHA56_RS15250;old_locus_tag=PHA56_15250 NZ_CP116214.1 Protein Homology CDS 3186019 3186615 . - 0 ID=cds-WP_014838356.1;Parent=gene-PHA56_RS15250;Dbxref=Genbank:WP_014838356.1;Name=WP_014838356.1;Ontology_term=GO:0010124;gbkey=CDS;gene=paaY;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226681.1;locus_tag=PHA56_RS15250;product=phenylacetic acid degradation protein PaaY;protein_id=WP_014838356.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3186625 3187551 . - . ID=gene-PHA56_RS15255;Name=paaX;gbkey=Gene;gene=paaX;gene_biotype=protein_coding;locus_tag=PHA56_RS15255;old_locus_tag=PHA56_15255 NZ_CP116214.1 Protein Homology CDS 3186625 3187551 . - 0 ID=cds-WP_162763178.1;Parent=gene-PHA56_RS15255;Dbxref=Genbank:WP_162763178.1;Name=WP_162763178.1;Ontology_term=GO:0006351;gbkey=CDS;gene=paaX;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229190.1;locus_tag=PHA56_RS15255;product=phenylacetic acid degradation operon negative regulatory protein PaaX;protein_id=WP_162763178.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3188554 3189870 . - . ID=gene-PHA56_RS15260;Name=paaF;gbkey=Gene;gene=paaF;gene_biotype=protein_coding;locus_tag=PHA56_RS15260;old_locus_tag=PHA56_15260 NZ_CP116214.1 Protein Homology CDS 3188554 3189870 . - 0 ID=cds-WP_004850513.1;Parent=gene-PHA56_RS15260;Dbxref=Genbank:WP_004850513.1;Name=WP_004850513.1;Ontology_term=GO:0010124,GO:0047475;gbkey=CDS;gene=paaF;go_function=phenylacetate-CoA ligase activity|0047475||IEA;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226679.1;locus_tag=PHA56_RS15260;product=phenylacetate--CoA ligase;protein_id=WP_004850513.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3189899 3191104 . - . ID=gene-PHA56_RS15265;Name=pcaF;gbkey=Gene;gene=pcaF;gene_biotype=protein_coding;locus_tag=PHA56_RS15265;old_locus_tag=PHA56_15265 NZ_CP116214.1 Protein Homology CDS 3189899 3191104 . - 0 ID=cds-WP_038424457.1;Parent=gene-PHA56_RS15265;Dbxref=Genbank:WP_038424457.1;Name=WP_038424457.1;Ontology_term=GO:0019619,GO:0016747;gbkey=CDS;gene=pcaF;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;go_process=3%2C4-dihydroxybenzoate catabolic process|0019619||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226678.1;locus_tag=PHA56_RS15265;product=3-oxoadipyl-CoA thiolase;protein_id=WP_038424457.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3191104 3191526 . - . ID=gene-PHA56_RS15270;Name=paaI;gbkey=Gene;gene=paaI;gene_biotype=protein_coding;locus_tag=PHA56_RS15270;old_locus_tag=PHA56_15270 NZ_CP116214.1 Protein Homology CDS 3191104 3191526 . - 0 ID=cds-WP_014229187.1;Parent=gene-PHA56_RS15270;Dbxref=Genbank:WP_014229187.1;Name=WP_014229187.1;Ontology_term=GO:0010124;gbkey=CDS;gene=paaI;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226677.1;locus_tag=PHA56_RS15270;product=hydroxyphenylacetyl-CoA thioesterase PaaI;protein_id=WP_014229187.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3191516 3192937 . - . ID=gene-PHA56_RS15275;Name=PHA56_RS15275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15275;old_locus_tag=PHA56_15275 NZ_CP116214.1 Protein Homology CDS 3191516 3192937 . - 0 ID=cds-WP_038424456.1;Parent=gene-PHA56_RS15275;Dbxref=Genbank:WP_038424456.1;Name=WP_038424456.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016529911.1;locus_tag=PHA56_RS15275;product=3-hydroxyacyl-CoA dehydrogenase;protein_id=WP_038424456.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3192941 3193729 . - . ID=gene-PHA56_RS15280;Name=paaG;gbkey=Gene;gene=paaG;gene_biotype=protein_coding;locus_tag=PHA56_RS15280;old_locus_tag=PHA56_15280 NZ_CP116214.1 Protein Homology CDS 3192941 3193729 . - 0 ID=cds-WP_038424455.1;Parent=gene-PHA56_RS15280;Dbxref=Genbank:WP_038424455.1;Name=WP_038424455.1;Ontology_term=GO:0010124,GO:0004300;gbkey=CDS;gene=paaG;go_function=enoyl-CoA hydratase activity|0004300||IEA;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226675.1;locus_tag=PHA56_RS15280;product=2-(1%2C2-epoxy-1%2C2-dihydrophenyl)acetyl-CoA isomerase PaaG;protein_id=WP_038424455.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3193732 3194499 . - . ID=gene-PHA56_RS15285;Name=PHA56_RS15285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15285;old_locus_tag=PHA56_15285 NZ_CP116214.1 Protein Homology CDS 3193732 3194499 . - 0 ID=cds-WP_038424454.1;Parent=gene-PHA56_RS15285;Dbxref=Genbank:WP_038424454.1;Name=WP_038424454.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226674.1;locus_tag=PHA56_RS15285;product=2%2C3-dehydroadipyl-CoA hydratase;protein_id=WP_038424454.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3194496 3195566 . - . ID=gene-PHA56_RS15290;Name=paaK;gbkey=Gene;gene=paaK;gene_biotype=protein_coding;locus_tag=PHA56_RS15290;old_locus_tag=PHA56_15290 NZ_CP116214.1 Protein Homology CDS 3194496 3195566 . - 0 ID=cds-WP_076752250.1;Parent=gene-PHA56_RS15290;Dbxref=Genbank:WP_076752250.1;Name=WP_076752250.1;Ontology_term=GO:0010124;gbkey=CDS;gene=paaK;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226673.1;locus_tag=PHA56_RS15290;product=phenylacetate-CoA oxygenase/reductase subunit PaaK;protein_id=WP_076752250.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3195574 3196071 . - . ID=gene-PHA56_RS15295;Name=paaJ;gbkey=Gene;gene=paaJ;gene_biotype=protein_coding;locus_tag=PHA56_RS15295;old_locus_tag=PHA56_15295 NZ_CP116214.1 Protein Homology CDS 3195574 3196071 . - 0 ID=cds-WP_014229182.1;Parent=gene-PHA56_RS15295;Dbxref=Genbank:WP_014229182.1;Name=WP_014229182.1;Ontology_term=GO:0010124;gbkey=CDS;gene=paaJ;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226672.1;locus_tag=PHA56_RS15295;product=phenylacetate-CoA oxygenase subunit PaaJ;protein_id=WP_014229182.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3196084 3196839 . - . ID=gene-PHA56_RS15300;Name=paaC;gbkey=Gene;gene=paaC;gene_biotype=protein_coding;locus_tag=PHA56_RS15300;old_locus_tag=PHA56_15300 NZ_CP116214.1 Protein Homology CDS 3196084 3196839 . - 0 ID=cds-WP_032693436.1;Parent=gene-PHA56_RS15300;Dbxref=Genbank:WP_032693436.1;Name=WP_032693436.1;Ontology_term=GO:0010124;gbkey=CDS;gene=paaC;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226671.1;locus_tag=PHA56_RS15300;product=phenylacetate-CoA oxygenase subunit PaaC;protein_id=WP_032693436.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3196847 3197134 . - . ID=gene-PHA56_RS15305;Name=paaB;gbkey=Gene;gene=paaB;gene_biotype=protein_coding;locus_tag=PHA56_RS15305;old_locus_tag=PHA56_15305 NZ_CP116214.1 Protein Homology CDS 3196847 3197134 . - 0 ID=cds-WP_004850493.1;Parent=gene-PHA56_RS15305;Dbxref=Genbank:WP_004850493.1;Name=WP_004850493.1;Ontology_term=GO:0010124;gbkey=CDS;gene=paaB;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226670.1;locus_tag=PHA56_RS15305;product=1%2C2-phenylacetyl-CoA epoxidase subunit B;protein_id=WP_004850493.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3197146 3198075 . - . ID=gene-PHA56_RS15310;Name=paaA;gbkey=Gene;gene=paaA;gene_biotype=protein_coding;locus_tag=PHA56_RS15310;old_locus_tag=PHA56_15310 NZ_CP116214.1 Protein Homology CDS 3197146 3198075 . - 0 ID=cds-WP_014229180.1;Parent=gene-PHA56_RS15310;Dbxref=Genbank:WP_014229180.1;Name=WP_014229180.1;Ontology_term=GO:0010124,GO:0097266;gbkey=CDS;gene=paaA;go_function=phenylacetyl-CoA 1%2C2-epoxidase activity|0097266||IEA;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415906.1;locus_tag=PHA56_RS15310;product=1%2C2-phenylacetyl-CoA epoxidase subunit A;protein_id=WP_014229180.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3198362 3200407 . + . ID=gene-PHA56_RS15315;Name=paaZ;gbkey=Gene;gene=paaZ;gene_biotype=protein_coding;locus_tag=PHA56_RS15315;old_locus_tag=PHA56_15315 NZ_CP116214.1 Protein Homology CDS 3198362 3200407 . + 0 ID=cds-WP_271292919.1;Parent=gene-PHA56_RS15315;Dbxref=Genbank:WP_271292919.1;Name=WP_271292919.1;gbkey=CDS;gene=paaZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017145988.1;locus_tag=PHA56_RS15315;product=phenylacetic acid degradation bifunctional protein PaaZ;protein_id=WP_271292919.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3200598 3202856 . + . ID=gene-PHA56_RS15320;Name=tynA;gbkey=Gene;gene=tynA;gene_biotype=protein_coding;locus_tag=PHA56_RS15320;old_locus_tag=PHA56_15320 NZ_CP116214.1 Protein Homology CDS 3200598 3202856 . + 0 ID=cds-WP_038424448.1;Parent=gene-PHA56_RS15320;Dbxref=Genbank:WP_038424448.1;Name=WP_038424448.1;Ontology_term=GO:0009308,GO:0005507,GO:0008131,GO:0048038;gbkey=CDS;gene=tynA;go_function=copper ion binding|0005507||IEA,primary amine oxidase activity|0008131||IEA,quinone binding|0048038||IEA;go_process=amine metabolic process|0009308||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015366331.1;locus_tag=PHA56_RS15320;product=primary-amine oxidase;protein_id=WP_038424448.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3203141 3203566 . - . ID=gene-PHA56_RS15325;Name=PHA56_RS15325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15325;old_locus_tag=PHA56_15325 NZ_CP116214.1 Protein Homology CDS 3203141 3203566 . - 0 ID=cds-WP_014229177.1;Parent=gene-PHA56_RS15325;Dbxref=Genbank:WP_014229177.1;Name=WP_014229177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004203774.1;locus_tag=PHA56_RS15325;product=VOC family protein;protein_id=WP_014229177.1;transl_table=11 NZ_CP116214.1 RefSeq pseudogene 3203737 3204111 . - . ID=gene-PHA56_RS15330;Name=PHA56_RS15330;end_range=3204111,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS15330;old_locus_tag=PHA56_15330;partial=true;pseudo=true NZ_CP116214.1 Protein Homology CDS 3203737 3204111 . - 0 ID=cds-PHA56_RS15330;Parent=gene-PHA56_RS15330;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=3204111,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229176.1;locus_tag=PHA56_RS15330;partial=true;product=alpha/beta hydrolase;pseudo=true;transl_table=11 NZ_CP116214.1 RefSeq gene 3204164 3205189 . + . ID=gene-PHA56_RS15335;Name=PHA56_RS15335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15335;old_locus_tag=PHA56_15335 NZ_CP116214.1 Protein Homology CDS 3204164 3205189 . + 0 ID=cds-WP_040118421.1-3;Parent=gene-PHA56_RS15335;Dbxref=Genbank:WP_040118421.1;Name=WP_040118421.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011144720.1;locus_tag=PHA56_RS15335;product=IS630 family transposase;protein_id=WP_040118421.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3205165 3205698 . - . ID=gene-PHA56_RS15340;Name=PHA56_RS15340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15340;old_locus_tag=PHA56_15340 NZ_CP116214.1 Protein Homology CDS 3205165 3205698 . - 0 ID=cds-WP_271292920.1;Parent=gene-PHA56_RS15340;Dbxref=Genbank:WP_271292920.1;Name=WP_271292920.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012770.2;locus_tag=PHA56_RS15340;product=alpha/beta fold hydrolase;protein_id=WP_271292920.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3206007 3206234 . + . ID=gene-PHA56_RS15345;Name=PHA56_RS15345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15345;old_locus_tag=PHA56_15345 NZ_CP116214.1 Protein Homology CDS 3206007 3206234 . + 0 ID=cds-WP_071889104.1;Parent=gene-PHA56_RS15345;Dbxref=Genbank:WP_071889104.1;Name=WP_071889104.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004140530.1;locus_tag=PHA56_RS15345;product=DUF1272 domain-containing protein;protein_id=WP_071889104.1;transl_table=11 NZ_CP116214.1 RefSeq pseudogene 3206282 3206665 . - . ID=gene-PHA56_RS15350;Name=PHA56_RS15350;end_range=3206665,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS15350;old_locus_tag=PHA56_15350;partial=true;pseudo=true NZ_CP116214.1 Protein Homology CDS 3206282 3206665 . - 0 ID=cds-PHA56_RS15350;Parent=gene-PHA56_RS15350;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=3206665,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012968172.1;locus_tag=PHA56_RS15350;partial=true;product=LysR family transcriptional regulator substrate-binding protein;pseudo=true;transl_table=11 NZ_CP116214.1 RefSeq gene 3206662 3207651 . - . ID=gene-PHA56_RS15355;Name=PHA56_RS15355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15355;old_locus_tag=PHA56_15355 NZ_CP116214.1 Protein Homology CDS 3206662 3207651 . - 0 ID=cds-WP_032693433.1;Parent=gene-PHA56_RS15355;Dbxref=Genbank:WP_032693433.1;Name=WP_032693433.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014838347.1;locus_tag=PHA56_RS15355;product=NAD-dependent epimerase/dehydratase family protein;protein_id=WP_032693433.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3207748 3208659 . + . ID=gene-PHA56_RS15360;Name=PHA56_RS15360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15360;old_locus_tag=PHA56_15360 NZ_CP116214.1 Protein Homology CDS 3207748 3208659 . + 0 ID=cds-WP_038424445.1;Parent=gene-PHA56_RS15360;Dbxref=Genbank:WP_038424445.1;Name=WP_038424445.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004850474.1;locus_tag=PHA56_RS15360;product=LysR family transcriptional regulator;protein_id=WP_038424445.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3208926 3209378 . - . ID=gene-PHA56_RS15365;Name=PHA56_RS15365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15365;old_locus_tag=PHA56_15365 NZ_CP116214.1 Protein Homology CDS 3208926 3209378 . - 0 ID=cds-WP_014229171.1;Parent=gene-PHA56_RS15365;Dbxref=Genbank:WP_014229171.1;Name=WP_014229171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013575652.1;locus_tag=PHA56_RS15365;product=GNAT family N-acetyltransferase;protein_id=WP_014229171.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3209689 3210669 . + . ID=gene-PHA56_RS15370;Name=PHA56_RS15370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15370;old_locus_tag=PHA56_15370 NZ_CP116214.1 Protein Homology CDS 3209689 3210669 . + 0 ID=cds-WP_014229170.1;Parent=gene-PHA56_RS15370;Dbxref=Genbank:WP_014229170.1;Name=WP_014229170.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226951.1;locus_tag=PHA56_RS15370;product=helix-turn-helix domain-containing protein;protein_id=WP_014229170.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3210748 3211758 . + . ID=gene-PHA56_RS15375;Name=gap;gbkey=Gene;gene=gap;gene_biotype=protein_coding;locus_tag=PHA56_RS15375;old_locus_tag=PHA56_15375 NZ_CP116214.1 Protein Homology CDS 3210748 3211758 . + 0 ID=cds-WP_038424443.1;Parent=gene-PHA56_RS15375;Dbxref=Genbank:WP_038424443.1;Name=WP_038424443.1;Ontology_term=GO:0006094,GO:0006096,GO:0019682;gbkey=CDS;gene=gap;go_process=gluconeogenesis|0006094||IEA,glycolytic process|0006096||IEA,glyceraldehyde-3-phosphate metabolic process|0019682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016150174.1;locus_tag=PHA56_RS15375;product=type I glyceraldehyde-3-phosphate dehydrogenase;protein_id=WP_038424443.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3212050 3213021 . - . ID=gene-PHA56_RS15380;Name=PHA56_RS15380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15380;old_locus_tag=PHA56_15380 NZ_CP116214.1 Protein Homology CDS 3212050 3213021 . - 0 ID=cds-WP_038424441.1;Parent=gene-PHA56_RS15380;Dbxref=Genbank:WP_038424441.1;Name=WP_038424441.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229168.1;locus_tag=PHA56_RS15380;product=hypothetical protein;protein_id=WP_038424441.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3213643 3214410 . - . ID=gene-PHA56_RS15385;Name=PHA56_RS15385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15385;old_locus_tag=PHA56_15385 NZ_CP116214.1 Protein Homology CDS 3213643 3214410 . - 0 ID=cds-WP_014229167.1;Parent=gene-PHA56_RS15385;Dbxref=Genbank:WP_014229167.1;Name=WP_014229167.1;Ontology_term=GO:0016407;gbkey=CDS;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004850458.1;locus_tag=PHA56_RS15385;product=arylamine N-acetyltransferase;protein_id=WP_014229167.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3214449 3215945 . + . ID=gene-PHA56_RS15390;Name=PHA56_RS15390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15390;old_locus_tag=PHA56_15390 NZ_CP116214.1 Protein Homology CDS 3214449 3215945 . + 0 ID=cds-WP_038424439.1;Parent=gene-PHA56_RS15390;Dbxref=Genbank:WP_038424439.1;Name=WP_038424439.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014838338.1;locus_tag=PHA56_RS15390;product=PLP-dependent aminotransferase family protein;protein_id=WP_038424439.1;transl_table=11 NZ_CP116214.1 RefSeq pseudogene 3216045 3216182 . - . ID=gene-PHA56_RS15395;Name=PHA56_RS15395;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS15395;old_locus_tag=PHA56_15395;partial=true;pseudo=true;start_range=.,3216045 NZ_CP116214.1 Protein Homology CDS 3216045 3216182 . - 0 ID=cds-PHA56_RS15395;Parent=gene-PHA56_RS15395;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014606046.1;locus_tag=PHA56_RS15395;partial=true;product=RNA polymerase sigma factor;pseudo=true;start_range=.,3216045;transl_table=11 NZ_CP116214.1 RefSeq gene 3216205 3216753 . - . ID=gene-PHA56_RS15400;Name=PHA56_RS15400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15400;old_locus_tag=PHA56_15400 NZ_CP116214.1 Protein Homology CDS 3216205 3216753 . - 0 ID=cds-WP_014838337.1;Parent=gene-PHA56_RS15400;Dbxref=Genbank:WP_014838337.1;Name=WP_014838337.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014838337.1;locus_tag=PHA56_RS15400;product=tetratricopeptide repeat protein;protein_id=WP_014838337.1;transl_table=11 NZ_CP116214.1 RefSeq pseudogene 3216865 3217011 . - . ID=gene-PHA56_RS15405;Name=PHA56_RS15405;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS15405;old_locus_tag=PHA56_15405;partial=true;pseudo=true;start_range=.,3216865 NZ_CP116214.1 Protein Homology CDS 3216865 3217011 . - 0 ID=cds-PHA56_RS15405;Parent=gene-PHA56_RS15405;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007371019.1;locus_tag=PHA56_RS15405;partial=true;product=cytochrome b;pseudo=true;start_range=.,3216865;transl_table=11 NZ_CP116214.1 RefSeq gene 3217310 3218056 . - . ID=gene-PHA56_RS15410;Name=PHA56_RS15410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15410;old_locus_tag=PHA56_15410 NZ_CP116214.1 Protein Homology CDS 3217310 3218056 . - 0 ID=cds-WP_025107943.1;Parent=gene-PHA56_RS15410;Dbxref=Genbank:WP_025107943.1;Name=WP_025107943.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020079053.1;locus_tag=PHA56_RS15410;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_025107943.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3218127 3218816 . - . ID=gene-PHA56_RS15415;Name=PHA56_RS15415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15415;old_locus_tag=PHA56_15415 NZ_CP116214.1 Protein Homology CDS 3218127 3218816 . - 0 ID=cds-WP_038424437.1;Parent=gene-PHA56_RS15415;Dbxref=Genbank:WP_038424437.1;Name=WP_038424437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003029259.1;locus_tag=PHA56_RS15415;product=YafY family protein;protein_id=WP_038424437.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3219100 3219720 . + . ID=gene-PHA56_RS15420;Name=PHA56_RS15420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15420;old_locus_tag=PHA56_15420 NZ_CP116214.1 Protein Homology CDS 3219100 3219720 . + 0 ID=cds-WP_038424436.1;Parent=gene-PHA56_RS15420;Dbxref=Genbank:WP_038424436.1;Name=WP_038424436.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004850441.1;locus_tag=PHA56_RS15420;product=histidine phosphatase family protein;protein_id=WP_038424436.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3219969 3220448 . + . ID=gene-PHA56_RS15425;Name=PHA56_RS15425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15425;old_locus_tag=PHA56_15425 NZ_CP116214.1 Protein Homology CDS 3219969 3220448 . + 0 ID=cds-WP_004121015.1;Parent=gene-PHA56_RS15425;Dbxref=Genbank:WP_004121015.1;Name=WP_004121015.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017900633.1;locus_tag=PHA56_RS15425;product=Rrf2 family transcriptional regulator;protein_id=WP_004121015.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3220512 3223664 . - . ID=gene-PHA56_RS15430;Name=oqxB;gbkey=Gene;gene=oqxB;gene_biotype=protein_coding;locus_tag=PHA56_RS15430;old_locus_tag=PHA56_15430 NZ_CP116214.1 Protein Homology CDS 3220512 3223664 . - 0 ID=cds-WP_038424435.1;Parent=gene-PHA56_RS15430;Dbxref=Genbank:WP_038424435.1;Name=WP_038424435.1;Ontology_term=GO:0042908,GO:0015562,GO:0016020;gbkey=CDS;gene=oqxB;go_component=membrane|0016020||IEA;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=xenobiotic transport|0042908||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_021312368.1;locus_tag=PHA56_RS15430;product=multidrug efflux RND transporter permease subunit OqxB;protein_id=WP_038424435.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3223689 3224864 . - . ID=gene-PHA56_RS15435;Name=PHA56_RS15435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15435;old_locus_tag=PHA56_15435 NZ_CP116214.1 Protein Homology CDS 3223689 3224864 . - 0 ID=cds-WP_014229159.1;Parent=gene-PHA56_RS15435;Dbxref=Genbank:WP_014229159.1;Name=WP_014229159.1;Ontology_term=GO:0006810,GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002914189.1;locus_tag=PHA56_RS15435;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_014229159.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3225200 3225574 . + . ID=gene-PHA56_RS15440;Name=PHA56_RS15440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15440;old_locus_tag=PHA56_15440 NZ_CP116214.1 Protein Homology CDS 3225200 3225574 . + 0 ID=cds-WP_025107948.1;Parent=gene-PHA56_RS15440;Dbxref=Genbank:WP_025107948.1;Name=WP_025107948.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004850429.1;locus_tag=PHA56_RS15440;product=helix-turn-helix domain-containing protein;protein_id=WP_025107948.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3225474 3226448 . - . ID=gene-PHA56_RS15445;Name=PHA56_RS15445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15445;old_locus_tag=PHA56_15445 NZ_CP116214.1 Protein Homology CDS 3225474 3226448 . - 0 ID=cds-WP_223226787.1;Parent=gene-PHA56_RS15445;Dbxref=Genbank:WP_223226787.1;Name=WP_223226787.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024242.2;locus_tag=PHA56_RS15445;product=helix-turn-helix transcriptional regulator;protein_id=WP_223226787.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3226526 3228565 . + . ID=gene-PHA56_RS15450;Name=PHA56_RS15450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15450;old_locus_tag=PHA56_15450 NZ_CP116214.1 Protein Homology CDS 3226526 3228565 . + 0 ID=cds-WP_119834499.1;Parent=gene-PHA56_RS15450;Dbxref=Genbank:WP_119834499.1;Name=WP_119834499.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014838332.1;locus_tag=PHA56_RS15450;product=FUSC family protein;protein_id=WP_119834499.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3228555 3228770 . + . ID=gene-PHA56_RS15455;Name=PHA56_RS15455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15455;old_locus_tag=PHA56_15455 NZ_CP116214.1 Protein Homology CDS 3228555 3228770 . + 0 ID=cds-WP_119834498.1;Parent=gene-PHA56_RS15455;Dbxref=Genbank:WP_119834498.1;Name=WP_119834498.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009652967.1;locus_tag=PHA56_RS15455;product=DUF1656 domain-containing protein;protein_id=WP_119834498.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3228767 3229690 . + . ID=gene-PHA56_RS15460;Name=PHA56_RS15460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15460;old_locus_tag=PHA56_15460 NZ_CP116214.1 Protein Homology CDS 3228767 3229690 . + 0 ID=cds-WP_163585728.1;Parent=gene-PHA56_RS15460;Dbxref=Genbank:WP_163585728.1;Name=WP_163585728.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229154.1;locus_tag=PHA56_RS15460;product=HlyD family secretion protein;protein_id=WP_163585728.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3229801 3230601 . + . ID=gene-PHA56_RS15465;Name=PHA56_RS15465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15465;old_locus_tag=PHA56_15465 NZ_CP116214.1 Protein Homology CDS 3229801 3230601 . + 0 ID=cds-WP_119834496.1;Parent=gene-PHA56_RS15465;Dbxref=Genbank:WP_119834496.1;Name=WP_119834496.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004850420.1;locus_tag=PHA56_RS15465;product=nucleotidyltransferase domain-containing protein;protein_id=WP_119834496.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3231042 3231611 . + . ID=gene-PHA56_RS15470;Name=PHA56_RS15470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15470;old_locus_tag=PHA56_15470 NZ_CP116214.1 Protein Homology CDS 3231042 3231611 . + 0 ID=cds-WP_032693424.1;Parent=gene-PHA56_RS15470;Dbxref=Genbank:WP_032693424.1;Name=WP_032693424.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004121027.1;locus_tag=PHA56_RS15470;product=XRE family transcriptional regulator;protein_id=WP_032693424.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3232053 3232415 . + . ID=gene-PHA56_RS15475;Name=PHA56_RS15475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15475;old_locus_tag=PHA56_15475 NZ_CP116214.1 Protein Homology CDS 3232053 3232415 . + 0 ID=cds-WP_014229150.1;Parent=gene-PHA56_RS15475;Dbxref=Genbank:WP_014229150.1;Name=WP_014229150.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004850417.1;locus_tag=PHA56_RS15475;product=cupin domain-containing protein;protein_id=WP_014229150.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3233026 3234144 . + . ID=gene-PHA56_RS15480;Name=asd;gbkey=Gene;gene=asd;gene_biotype=protein_coding;locus_tag=PHA56_RS15480;old_locus_tag=PHA56_15480 NZ_CP116214.1 Protein Homology CDS 3233026 3234144 . + 0 ID=cds-WP_032693423.1;Parent=gene-PHA56_RS15480;Dbxref=Genbank:WP_032693423.1;Name=WP_032693423.1;Ontology_term=GO:0009089,GO:0004073;gbkey=CDS;gene=asd;go_function=aspartate-semialdehyde dehydrogenase activity|0004073||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014838326.1;locus_tag=PHA56_RS15480;product=aspartate-semialdehyde dehydrogenase;protein_id=WP_032693423.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3234217 3234753 . + . ID=gene-PHA56_RS15485;Name=PHA56_RS15485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15485;old_locus_tag=PHA56_15485 NZ_CP116214.1 Protein Homology CDS 3234217 3234753 . + 0 ID=cds-WP_085521328.1;Parent=gene-PHA56_RS15485;Dbxref=Genbank:WP_085521328.1;Name=WP_085521328.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017456359.1;locus_tag=PHA56_RS15485;product=dihydrofolate reductase family protein;protein_id=WP_085521328.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3234860 3235351 . + . ID=gene-PHA56_RS15490;Name=PHA56_RS15490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15490;old_locus_tag=PHA56_15490 NZ_CP116214.1 Protein Homology CDS 3234860 3235351 . + 0 ID=cds-WP_042945062.1;Parent=gene-PHA56_RS15490;Dbxref=Genbank:WP_042945062.1;Name=WP_042945062.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014838325.1;locus_tag=PHA56_RS15490;product=DinB family protein;protein_id=WP_042945062.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3235476 3236291 . - . ID=gene-PHA56_RS15495;Name=PHA56_RS15495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15495;old_locus_tag=PHA56_15495 NZ_CP116214.1 Protein Homology CDS 3235476 3236291 . - 0 ID=cds-WP_014838324.1;Parent=gene-PHA56_RS15495;Dbxref=Genbank:WP_014838324.1;Name=WP_014838324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004850413.1;locus_tag=PHA56_RS15495;product=phytanoyl-CoA dioxygenase family protein;protein_id=WP_014838324.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3236315 3237484 . - . ID=gene-PHA56_RS15500;Name=argE;gbkey=Gene;gene=argE;gene_biotype=protein_coding;locus_tag=PHA56_RS15500;old_locus_tag=PHA56_15500 NZ_CP116214.1 Protein Homology CDS 3236315 3237484 . - 0 ID=cds-WP_032693421.1;Parent=gene-PHA56_RS15500;Dbxref=Genbank:WP_032693421.1;Name=WP_032693421.1;Ontology_term=GO:0006592,GO:0008777;gbkey=CDS;gene=argE;go_function=acetylornithine deacetylase activity|0008777||IEA;go_process=ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229146.1;locus_tag=PHA56_RS15500;product=acetylornithine deacetylase;protein_id=WP_032693421.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3237477 3238151 . - . ID=gene-PHA56_RS15505;Name=PHA56_RS15505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15505;old_locus_tag=PHA56_15505 NZ_CP116214.1 Protein Homology CDS 3237477 3238151 . - 0 ID=cds-WP_014229145.1;Parent=gene-PHA56_RS15505;Dbxref=Genbank:WP_014229145.1;Name=WP_014229145.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229145.1;locus_tag=PHA56_RS15505;product=DUF1028 domain-containing protein;protein_id=WP_014229145.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3238148 3238582 . - . ID=gene-PHA56_RS15510;Name=PHA56_RS15510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15510;old_locus_tag=PHA56_15510 NZ_CP116214.1 Protein Homology CDS 3238148 3238582 . - 0 ID=cds-WP_004139129.1;Parent=gene-PHA56_RS15510;Dbxref=Genbank:WP_004139129.1;Name=WP_004139129.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004139129.1;locus_tag=PHA56_RS15510;product=RidA family protein;protein_id=WP_004139129.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3238606 3239865 . - . ID=gene-PHA56_RS15515;Name=PHA56_RS15515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15515;old_locus_tag=PHA56_15515 NZ_CP116214.1 Protein Homology CDS 3238606 3239865 . - 0 ID=cds-WP_014229144.1;Parent=gene-PHA56_RS15515;Dbxref=Genbank:WP_014229144.1;Name=WP_014229144.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020803972.1;locus_tag=PHA56_RS15515;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_014229144.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3240035 3240952 . - . ID=gene-PHA56_RS15520;Name=PHA56_RS15520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15520;old_locus_tag=PHA56_15520 NZ_CP116214.1 Protein Homology CDS 3240035 3240952 . - 0 ID=cds-WP_009653045.1;Parent=gene-PHA56_RS15520;Dbxref=Genbank:WP_009653045.1;Name=WP_009653045.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004190428.1;locus_tag=PHA56_RS15520;product=LysR substrate-binding domain-containing protein;protein_id=WP_009653045.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3241440 3242960 . + . ID=gene-PHA56_RS15525;Name=PHA56_RS15525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15525;old_locus_tag=PHA56_15525 NZ_CP116214.1 Protein Homology CDS 3241440 3242960 . + 0 ID=cds-WP_014838321.1;Parent=gene-PHA56_RS15525;Dbxref=Genbank:WP_014838321.1;Name=WP_014838321.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229143.1;locus_tag=PHA56_RS15525;product=amino acid ABC transporter permease/ATP-binding protein;protein_id=WP_014838321.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3242988 3243860 . + . ID=gene-PHA56_RS15530;Name=PHA56_RS15530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15530;old_locus_tag=PHA56_15530 NZ_CP116214.1 Protein Homology CDS 3242988 3243860 . + 0 ID=cds-WP_119834495.1;Parent=gene-PHA56_RS15530;Dbxref=Genbank:WP_119834495.1;Name=WP_119834495.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017898740.1;locus_tag=PHA56_RS15530;product=phytanoyl-CoA dioxygenase family protein;protein_id=WP_119834495.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3243884 3244714 . + . ID=gene-PHA56_RS15535;Name=PHA56_RS15535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15535;old_locus_tag=PHA56_15535 NZ_CP116214.1 Protein Homology CDS 3243884 3244714 . + 0 ID=cds-WP_004850396.1;Parent=gene-PHA56_RS15535;Dbxref=Genbank:WP_004850396.1;Name=WP_004850396.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015958334.1;locus_tag=PHA56_RS15535;product=ABC transporter substrate-binding protein;protein_id=WP_004850396.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3244719 3245450 . + . ID=gene-PHA56_RS15540;Name=PHA56_RS15540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15540;old_locus_tag=PHA56_15540 NZ_CP116214.1 Protein Homology CDS 3244719 3245450 . + 0 ID=cds-WP_088167759.1;Parent=gene-PHA56_RS15540;Dbxref=Genbank:WP_088167759.1;Name=WP_088167759.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017879878.1;locus_tag=PHA56_RS15540;product=class II aldolase and adducin N-terminal domain-containing protein;protein_id=WP_088167759.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3245607 3247106 . - . ID=gene-PHA56_RS15545;Name=PHA56_RS15545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15545;old_locus_tag=PHA56_15545 NZ_CP116214.1 Protein Homology CDS 3245607 3247106 . - 0 ID=cds-WP_046877238.1;Parent=gene-PHA56_RS15545;Dbxref=Genbank:WP_046877238.1;Name=WP_046877238.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226664.1;locus_tag=PHA56_RS15545;product=aldehyde dehydrogenase family protein;protein_id=WP_046877238.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3247342 3248250 . + . ID=gene-PHA56_RS15550;Name=feaR;gbkey=Gene;gene=feaR;gene_biotype=protein_coding;locus_tag=PHA56_RS15550;old_locus_tag=PHA56_15550 NZ_CP116214.1 Protein Homology CDS 3247342 3248250 . + 0 ID=cds-WP_025107961.1;Parent=gene-PHA56_RS15550;Dbxref=Genbank:WP_025107961.1;Name=WP_025107961.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=feaR;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004850381.1;locus_tag=PHA56_RS15550;product=transcriptional regulator FeaR;protein_id=WP_025107961.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3248251 3248574 . - . ID=gene-PHA56_RS15555;Name=PHA56_RS15555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15555;old_locus_tag=PHA56_15555 NZ_CP116214.1 Protein Homology CDS 3248251 3248574 . - 0 ID=cds-WP_014838317.1;Parent=gene-PHA56_RS15555;Dbxref=Genbank:WP_014838317.1;Name=WP_014838317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226662.1;locus_tag=PHA56_RS15555;product=YdbL family protein;protein_id=WP_014838317.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3248582 3248767 . - . ID=gene-PHA56_RS15560;Name=PHA56_RS15560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15560;old_locus_tag=PHA56_15560 NZ_CP116214.1 Protein Homology CDS 3248582 3248767 . - 0 ID=cds-WP_004121063.1;Parent=gene-PHA56_RS15560;Dbxref=Genbank:WP_004121063.1;Name=WP_004121063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004204017.1;locus_tag=PHA56_RS15560;product=YnbE family lipoprotein;protein_id=WP_004121063.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3248767 3251406 . - . ID=gene-PHA56_RS15565;Name=PHA56_RS15565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15565;old_locus_tag=PHA56_15565 NZ_CP116214.1 Protein Homology CDS 3248767 3251406 . - 0 ID=cds-WP_119834494.1;Parent=gene-PHA56_RS15565;Dbxref=Genbank:WP_119834494.1;Name=WP_119834494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004121065.1;locus_tag=PHA56_RS15565;product=YdbH family protein;protein_id=WP_119834494.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3251602 3252099 . + . ID=gene-PHA56_RS15570;Name=PHA56_RS15570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15570;old_locus_tag=PHA56_15570 NZ_CP116214.1 Protein Homology CDS 3251602 3252099 . + 0 ID=cds-WP_119834493.1;Parent=gene-PHA56_RS15570;Dbxref=Genbank:WP_119834493.1;Name=WP_119834493.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229136.1;locus_tag=PHA56_RS15570;product=DedA family protein;protein_id=WP_119834493.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3252249 3253238 . + . ID=gene-PHA56_RS15575;Name=PHA56_RS15575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15575;old_locus_tag=PHA56_15575 NZ_CP116214.1 Protein Homology CDS 3252249 3253238 . + 0 ID=cds-WP_004112629.1;Parent=gene-PHA56_RS15575;Dbxref=Genbank:WP_004112629.1;Name=WP_004112629.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226656.1;locus_tag=PHA56_RS15575;product=2-hydroxyacid dehydrogenase;protein_id=WP_004112629.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3253364 3253804 . + . ID=gene-PHA56_RS15580;Name=hslJ;gbkey=Gene;gene=hslJ;gene_biotype=protein_coding;locus_tag=PHA56_RS15580;old_locus_tag=PHA56_15580 NZ_CP116214.1 Protein Homology CDS 3253364 3253804 . + 0 ID=cds-WP_014229134.1;Parent=gene-PHA56_RS15580;Dbxref=Genbank:WP_014229134.1;Name=WP_014229134.1;gbkey=CDS;gene=hslJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229134.1;locus_tag=PHA56_RS15580;product=heat shock protein HslJ;protein_id=WP_014229134.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3253801 3254073 . - . ID=gene-PHA56_RS15585;Name=PHA56_RS15585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15585;old_locus_tag=PHA56_15585 NZ_CP116214.1 Protein Homology CDS 3253801 3254073 . - 0 ID=cds-WP_004101621.1;Parent=gene-PHA56_RS15585;Dbxref=Genbank:WP_004101621.1;Name=WP_004101621.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588453.1;locus_tag=PHA56_RS15585;product=DUF333 domain-containing protein;protein_id=WP_004101621.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3254359 3264372 . - . ID=gene-PHA56_RS15590;Name=PHA56_RS15590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15590;old_locus_tag=PHA56_15590 NZ_CP116214.1 Protein Homology CDS 3254359 3264372 . - 0 ID=cds-WP_189116176.1;Parent=gene-PHA56_RS15590;Dbxref=Genbank:WP_189116176.1;Name=WP_189116176.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004112625.1;locus_tag=PHA56_RS15590;product=DUF1983 domain-containing protein;protein_id=WP_189116176.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3264435 3265049 . - . ID=gene-PHA56_RS15595;Name=PHA56_RS15595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15595;old_locus_tag=PHA56_15595 NZ_CP116214.1 Protein Homology CDS 3264435 3265049 . - 0 ID=cds-WP_038424422.1;Parent=gene-PHA56_RS15595;Dbxref=Genbank:WP_038424422.1;Name=WP_038424422.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004112621.1;locus_tag=PHA56_RS15595;product=tail assembly protein;protein_id=WP_038424422.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3265217 3265951 . - . ID=gene-PHA56_RS15600;Name=PHA56_RS15600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15600;old_locus_tag=PHA56_15600 NZ_CP116214.1 Protein Homology CDS 3265217 3265951 . - 0 ID=cds-WP_038423189.1;Parent=gene-PHA56_RS15600;Dbxref=Genbank:WP_038423189.1;Name=WP_038423189.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004850353.1;locus_tag=PHA56_RS15600;product=C40 family peptidase;protein_id=WP_038423189.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3265953 3266705 . - . ID=gene-PHA56_RS15605;Name=PHA56_RS15605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15605;old_locus_tag=PHA56_15605 NZ_CP116214.1 Protein Homology CDS 3265953 3266705 . - 0 ID=cds-WP_014229131.1;Parent=gene-PHA56_RS15605;Dbxref=Genbank:WP_014229131.1;Name=WP_014229131.1;Ontology_term=GO:0016032,GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004112614.1;locus_tag=PHA56_RS15605;product=phage minor tail protein L;protein_id=WP_014229131.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3266702 3267049 . - . ID=gene-PHA56_RS15610;Name=PHA56_RS15610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15610;old_locus_tag=PHA56_15610 NZ_CP116214.1 Protein Homology CDS 3266702 3267049 . - 0 ID=cds-WP_014229130.1;Parent=gene-PHA56_RS15610;Dbxref=Genbank:WP_014229130.1;Name=WP_014229130.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016807742.1;locus_tag=PHA56_RS15610;product=phage tail protein;protein_id=WP_014229130.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3267072 3268181 . - . ID=gene-PHA56_RS15615;Name=PHA56_RS15615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15615;old_locus_tag=PHA56_15615 NZ_CP116214.1 Protein Homology CDS 3267072 3268181 . - 0 ID=cds-WP_014229129.1;Parent=gene-PHA56_RS15615;Dbxref=Genbank:WP_014229129.1;Name=WP_014229129.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009652987.1;locus_tag=PHA56_RS15615;product=phage tail tape measure protein;protein_id=WP_014229129.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3268266 3268463 . - . ID=gene-PHA56_RS15620;Name=PHA56_RS15620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15620;old_locus_tag=PHA56_15620 NZ_CP116214.1 Protein Homology CDS 3268266 3268463 . - 0 ID=cds-WP_235894304.1;Parent=gene-PHA56_RS15620;Dbxref=Genbank:WP_235894304.1;Name=WP_235894304.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020388.2;locus_tag=PHA56_RS15620;product=DUF1799 domain-containing protein;protein_id=WP_235894304.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3268574 3268885 . - . ID=gene-PHA56_RS15625;Name=PHA56_RS15625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15625;old_locus_tag=PHA56_15625 NZ_CP116214.1 Protein Homology CDS 3268574 3268885 . - 0 ID=cds-WP_014229128.1;Parent=gene-PHA56_RS15625;Dbxref=Genbank:WP_014229128.1;Name=WP_014229128.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229128.1;locus_tag=PHA56_RS15625;product=phage tail assembly chaperone;protein_id=WP_014229128.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3268958 3269620 . - . ID=gene-PHA56_RS15630;Name=PHA56_RS15630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15630;old_locus_tag=PHA56_15630 NZ_CP116214.1 Protein Homology CDS 3268958 3269620 . - 0 ID=cds-WP_014229127.1;Parent=gene-PHA56_RS15630;Dbxref=Genbank:WP_014229127.1;Name=WP_014229127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229127.1;locus_tag=PHA56_RS15630;product=phage tail protein;protein_id=WP_014229127.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3269740 3270159 . - . ID=gene-PHA56_RS15635;Name=PHA56_RS15635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15635;old_locus_tag=PHA56_15635 NZ_CP116214.1 Protein Homology CDS 3269740 3270159 . - 0 ID=cds-WP_004850340.1;Parent=gene-PHA56_RS15635;Dbxref=Genbank:WP_004850340.1;Name=WP_004850340.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009653056.1;locus_tag=PHA56_RS15635;product=hypothetical protein;protein_id=WP_004850340.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3270215 3270757 . - . ID=gene-PHA56_RS15640;Name=PHA56_RS15640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15640;old_locus_tag=PHA56_15640 NZ_CP116214.1 Protein Homology CDS 3270215 3270757 . - 0 ID=cds-WP_038424420.1;Parent=gene-PHA56_RS15640;Dbxref=Genbank:WP_038424420.1;Name=WP_038424420.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009652998.1;locus_tag=PHA56_RS15640;product=glycosyl hydrolase 108 family protein;protein_id=WP_038424420.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3270765 3271037 . - . ID=gene-PHA56_RS15645;Name=PHA56_RS15645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15645;old_locus_tag=PHA56_15645 NZ_CP116214.1 Protein Homology CDS 3270765 3271037 . - 0 ID=cds-WP_032749344.1;Parent=gene-PHA56_RS15645;Dbxref=Genbank:WP_032749344.1;Name=WP_032749344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004101614.1;locus_tag=PHA56_RS15645;product=phage holin family protein;protein_id=WP_032749344.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3271027 3271419 . - . ID=gene-PHA56_RS15650;Name=PHA56_RS15650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15650;old_locus_tag=PHA56_15650 NZ_CP116214.1 Protein Homology CDS 3271027 3271419 . - 0 ID=cds-WP_009653048.1;Parent=gene-PHA56_RS15650;Dbxref=Genbank:WP_009653048.1;Name=WP_009653048.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004101612.1;locus_tag=PHA56_RS15650;product=phage holin family protein;protein_id=WP_009653048.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3271496 3271858 . - . ID=gene-PHA56_RS15655;Name=PHA56_RS15655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15655;old_locus_tag=PHA56_15655 NZ_CP116214.1 Protein Homology CDS 3271496 3271858 . - 0 ID=cds-WP_032720808.1;Parent=gene-PHA56_RS15655;Dbxref=Genbank:WP_032720808.1;Name=WP_032720808.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004850334.1;locus_tag=PHA56_RS15655;product=hypothetical protein;protein_id=WP_032720808.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3272321 3273022 . - . ID=gene-PHA56_RS15660;Name=PHA56_RS15660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15660;old_locus_tag=PHA56_15660 NZ_CP116214.1 Protein Homology CDS 3272321 3273022 . - 0 ID=cds-WP_046877232.1;Parent=gene-PHA56_RS15660;Dbxref=Genbank:WP_046877232.1;Name=WP_046877232.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004112598.1;locus_tag=PHA56_RS15660;product=S24 family peptidase;protein_id=WP_046877232.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3273492 3277019 . + . ID=gene-PHA56_RS15665;Name=nifJ;gbkey=Gene;gene=nifJ;gene_biotype=protein_coding;locus_tag=PHA56_RS15665;old_locus_tag=PHA56_15665 NZ_CP116214.1 Protein Homology CDS 3273492 3277019 . + 0 ID=cds-WP_038424419.1;Parent=gene-PHA56_RS15665;Dbxref=Genbank:WP_038424419.1;Name=WP_038424419.1;Ontology_term=GO:0022900,GO:0005506,GO:0016903,GO:0030976;gbkey=CDS;gene=nifJ;go_function=iron ion binding|0005506||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors|0016903||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009652970.1;locus_tag=PHA56_RS15665;product=pyruvate:ferredoxin (flavodoxin) oxidoreductase;protein_id=WP_038424419.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3277377 3278483 . + . ID=gene-PHA56_RS15670;Name=ompC;gbkey=Gene;gene=ompC;gene_biotype=protein_coding;locus_tag=PHA56_RS15670;old_locus_tag=PHA56_15670 NZ_CP116214.1 Protein Homology CDS 3277377 3278483 . + 0 ID=cds-WP_009652979.1;Parent=gene-PHA56_RS15670;Dbxref=Genbank:WP_009652979.1;Name=WP_009652979.1;Ontology_term=GO:0034220,GO:0015288;gbkey=CDS;gene=ompC;go_function=porin activity|0015288||IEA;go_process=monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415895.1;locus_tag=PHA56_RS15670;product=porin OmpC;protein_id=WP_009652979.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3278637 3278849 . + . ID=gene-PHA56_RS15675;Name=PHA56_RS15675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15675;old_locus_tag=PHA56_15675 NZ_CP116214.1 Protein Homology CDS 3278637 3278849 . + 0 ID=cds-WP_004850325.1;Parent=gene-PHA56_RS15675;Dbxref=Genbank:WP_004850325.1;Name=WP_004850325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004112591.1;locus_tag=PHA56_RS15675;product=KTSC domain-containing protein;protein_id=WP_004850325.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3278932 3279366 . + . ID=gene-PHA56_RS15680;Name=uspF;gbkey=Gene;gene=uspF;gene_biotype=protein_coding;locus_tag=PHA56_RS15680;old_locus_tag=PHA56_15680 NZ_CP116214.1 Protein Homology CDS 3278932 3279366 . + 0 ID=cds-WP_004101601.1;Parent=gene-PHA56_RS15680;Dbxref=Genbank:WP_004101601.1;Name=WP_004101601.1;gbkey=CDS;gene=uspF;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226650.1;locus_tag=PHA56_RS15680;product=universal stress protein UspF;protein_id=WP_004101601.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3279555 3279845 . + . ID=gene-PHA56_RS15685;Name=PHA56_RS15685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15685;old_locus_tag=PHA56_15685 NZ_CP116214.1 Protein Homology CDS 3279555 3279845 . + 0 ID=cds-WP_014229121.1;Parent=gene-PHA56_RS15685;Dbxref=Genbank:WP_014229121.1;Name=WP_014229121.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004850321.1;locus_tag=PHA56_RS15685;product=Bor family protein;protein_id=WP_014229121.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3280244 3281182 . - . ID=gene-PHA56_RS15690;Name=PHA56_RS15690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15690;old_locus_tag=PHA56_15690 NZ_CP116214.1 Protein Homology CDS 3280244 3281182 . - 0 ID=cds-WP_038424957.1;Parent=gene-PHA56_RS15690;Dbxref=Genbank:WP_038424957.1;Name=WP_038424957.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004026564.1;locus_tag=PHA56_RS15690;product=omptin family outer membrane protease;protein_id=WP_038424957.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3281993 3282928 . + . ID=gene-PHA56_RS15695;Name=ttcA;gbkey=Gene;gene=ttcA;gene_biotype=protein_coding;locus_tag=PHA56_RS15695;old_locus_tag=PHA56_15695 NZ_CP116214.1 Protein Homology CDS 3281993 3282928 . + 0 ID=cds-WP_014838310.1;Parent=gene-PHA56_RS15695;Dbxref=Genbank:WP_014838310.1;Name=WP_014838310.1;Ontology_term=GO:0008033;gbkey=CDS;gene=ttcA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226649.1;locus_tag=PHA56_RS15695;product=tRNA 2-thiocytidine(32) synthetase TtcA;protein_id=WP_014838310.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3282973 3284346 . - . ID=gene-PHA56_RS15700;Name=dbpA;gbkey=Gene;gene=dbpA;gene_biotype=protein_coding;locus_tag=PHA56_RS15700;old_locus_tag=PHA56_15700 NZ_CP116214.1 Protein Homology CDS 3282973 3284346 . - 0 ID=cds-WP_014229118.1;Parent=gene-PHA56_RS15700;Dbxref=Genbank:WP_014229118.1;Name=WP_014229118.1;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=dbpA;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309954.1;locus_tag=PHA56_RS15700;product=ATP-dependent RNA helicase DbpA;protein_id=WP_014229118.1;transl_table=11 NZ_CP116214.1 RefSeq pseudogene 3284387 3284551 . - . ID=gene-PHA56_RS15705;Name=PHA56_RS15705;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS15705;old_locus_tag=PHA56_15705;partial=true;pseudo=true;start_range=.,3284387 NZ_CP116214.1 Protein Homology CDS 3284387 3284551 . - 0 ID=cds-PHA56_RS15705;Parent=gene-PHA56_RS15705;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518775.1;locus_tag=PHA56_RS15705;partial=true;product=hypothetical protein;pseudo=true;start_range=.,3284387;transl_table=11 NZ_CP116214.1 RefSeq gene 3284830 3285813 . - . ID=gene-PHA56_RS15710;Name=zntB;gbkey=Gene;gene=zntB;gene_biotype=protein_coding;locus_tag=PHA56_RS15710;old_locus_tag=PHA56_15710 NZ_CP116214.1 Protein Homology CDS 3284830 3285813 . - 0 ID=cds-WP_004850311.1;Parent=gene-PHA56_RS15710;Dbxref=Genbank:WP_004850311.1;Name=WP_004850311.1;Ontology_term=GO:0071577,GO:0005385,GO:0005886;gbkey=CDS;gene=zntB;go_component=plasma membrane|0005886||IEA;go_function=zinc ion transmembrane transporter activity|0005385||IEA;go_process=zinc ion transmembrane transport|0071577||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226647.1;locus_tag=PHA56_RS15710;product=zinc transporter ZntB;protein_id=WP_004850311.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3286156 3286776 . - . ID=gene-PHA56_RS15715;Name=PHA56_RS15715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15715;old_locus_tag=PHA56_15715 NZ_CP116214.1 Protein Homology CDS 3286156 3286776 . - 0 ID=cds-WP_014229117.1;Parent=gene-PHA56_RS15715;Dbxref=Genbank:WP_014229117.1;Name=WP_014229117.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004850310.1;locus_tag=PHA56_RS15715;product=LuxR C-terminal-related transcriptional regulator;protein_id=WP_014229117.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3287393 3288136 . + . ID=gene-PHA56_RS15720;Name=PHA56_RS15720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15720;old_locus_tag=PHA56_15720 NZ_CP116214.1 Protein Homology CDS 3287393 3288136 . + 0 ID=cds-WP_014229116.1;Parent=gene-PHA56_RS15720;Dbxref=Genbank:WP_014229116.1;Name=WP_014229116.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226646.1;locus_tag=PHA56_RS15720;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_014229116.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3288129 3289220 . + . ID=gene-PHA56_RS15725;Name=PHA56_RS15725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15725;old_locus_tag=PHA56_15725 NZ_CP116214.1 Protein Homology CDS 3288129 3289220 . + 0 ID=cds-WP_170912124.1;Parent=gene-PHA56_RS15725;Dbxref=Genbank:WP_170912124.1;Name=WP_170912124.1;Ontology_term=GO:0000166;gbkey=CDS;go_function=nucleotide binding|0000166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004139200.1;locus_tag=PHA56_RS15725;product=oxidoreductase;protein_id=WP_170912124.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3289293 3290558 . - . ID=gene-PHA56_RS15730;Name=umuC;gbkey=Gene;gene=umuC;gene_biotype=protein_coding;locus_tag=PHA56_RS15730;old_locus_tag=PHA56_15730 NZ_CP116214.1 Protein Homology CDS 3289293 3290558 . - 0 ID=cds-WP_038424417.1;Parent=gene-PHA56_RS15730;Dbxref=Genbank:WP_038424417.1;Name=WP_038424417.1;Ontology_term=GO:0006281,GO:0003684;gbkey=CDS;gene=umuC;go_function=damaged DNA binding|0003684||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009653065.1;locus_tag=PHA56_RS15730;product=translesion error-prone DNA polymerase V subunit UmuC;protein_id=WP_038424417.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3290558 3290980 . - . ID=gene-PHA56_RS15735;Name=umuD;gbkey=Gene;gene=umuD;gene_biotype=protein_coding;locus_tag=PHA56_RS15735;old_locus_tag=PHA56_15735 NZ_CP116214.1 Protein Homology CDS 3290558 3290980 . - 0 ID=cds-WP_004850301.1;Parent=gene-PHA56_RS15735;Dbxref=Genbank:WP_004850301.1;Name=WP_004850301.1;Ontology_term=GO:0003677;gbkey=CDS;gene=umuD;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016807760.1;locus_tag=PHA56_RS15735;product=translesion error-prone DNA polymerase V autoproteolytic subunit;protein_id=WP_004850301.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3291268 3291462 . + . ID=gene-PHA56_RS15740;Name=PHA56_RS15740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15740;old_locus_tag=PHA56_15740 NZ_CP116214.1 Protein Homology CDS 3291268 3291462 . + 0 ID=cds-WP_014229113.1;Parent=gene-PHA56_RS15740;Dbxref=Genbank:WP_014229113.1;Name=WP_014229113.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226644.1;locus_tag=PHA56_RS15740;product=hypothetical protein;protein_id=WP_014229113.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3291619 3291810 . + . ID=gene-PHA56_RS15745;Name=PHA56_RS15745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15745;old_locus_tag=PHA56_15745 NZ_CP116214.1 Protein Homology CDS 3291619 3291810 . + 0 ID=cds-WP_004850297.1;Parent=gene-PHA56_RS15745;Dbxref=Genbank:WP_004850297.1;Name=WP_004850297.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004850297.1;locus_tag=PHA56_RS15745;product=hypothetical protein;protein_id=WP_004850297.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3291988 3292302 . + . ID=gene-PHA56_RS15750;Name=PHA56_RS15750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15750;old_locus_tag=PHA56_15750 NZ_CP116214.1 Protein Homology CDS 3291988 3292302 . + 0 ID=cds-WP_004850294.1;Parent=gene-PHA56_RS15750;Dbxref=Genbank:WP_004850294.1;Name=WP_004850294.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014838306.1;locus_tag=PHA56_RS15750;product=PTS cellobiose transporter subunit IIB;protein_id=WP_004850294.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3292357 3292920 . - . ID=gene-PHA56_RS15755;Name=PHA56_RS15755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15755;old_locus_tag=PHA56_15755 NZ_CP116214.1 Protein Homology CDS 3292357 3292920 . - 0 ID=cds-WP_004850292.1;Parent=gene-PHA56_RS15755;Dbxref=Genbank:WP_004850292.1;Name=WP_004850292.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004112567.1;locus_tag=PHA56_RS15755;product=DUF1440 domain-containing protein;protein_id=WP_004850292.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3293117 3293698 . - . ID=gene-PHA56_RS15760;Name=PHA56_RS15760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15760;old_locus_tag=PHA56_15760 NZ_CP116214.1 Protein Homology CDS 3293117 3293698 . - 0 ID=cds-WP_032720811.1;Parent=gene-PHA56_RS15760;Dbxref=Genbank:WP_032720811.1;Name=WP_032720811.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004850289.1;locus_tag=PHA56_RS15760;product=outer membrane beta-barrel protein;protein_id=WP_032720811.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3293824 3294453 . - . ID=gene-PHA56_RS15765;Name=PHA56_RS15765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15765;old_locus_tag=PHA56_15765 NZ_CP116214.1 Protein Homology CDS 3293824 3294453 . - 0 ID=cds-WP_014838304.1;Parent=gene-PHA56_RS15765;Dbxref=Genbank:WP_014838304.1;Name=WP_014838304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003862875.1;locus_tag=PHA56_RS15765;product=winged helix-turn-helix transcriptional regulator;protein_id=WP_014838304.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3294823 3295011 . - . ID=gene-PHA56_RS15770;Name=PHA56_RS15770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15770;old_locus_tag=PHA56_15770 NZ_CP116214.1 Protein Homology CDS 3294823 3295011 . - 0 ID=cds-WP_071532263.1;Parent=gene-PHA56_RS15770;Dbxref=Genbank:WP_071532263.1;Name=WP_071532263.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004101558.1;locus_tag=PHA56_RS15770;product=cold-shock protein;protein_id=WP_071532263.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3295850 3296875 . + . ID=gene-PHA56_RS15775;Name=PHA56_RS15775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15775;old_locus_tag=PHA56_15775 NZ_CP116214.1 Protein Homology CDS 3295850 3296875 . + 0 ID=cds-WP_038424414.1;Parent=gene-PHA56_RS15775;Dbxref=Genbank:WP_038424414.1;Name=WP_038424414.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009653031.1;locus_tag=PHA56_RS15775;product=AraC family transcriptional regulator;protein_id=WP_038424414.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3297070 3297900 . + . ID=gene-PHA56_RS15780;Name=PHA56_RS15780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15780;old_locus_tag=PHA56_15780 NZ_CP116214.1 Protein Homology CDS 3297070 3297900 . + 0 ID=cds-WP_014229107.1;Parent=gene-PHA56_RS15780;Dbxref=Genbank:WP_014229107.1;Name=WP_014229107.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009652962.1;locus_tag=PHA56_RS15780;product=oxidoreductase;protein_id=WP_014229107.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3297945 3298925 . - . ID=gene-PHA56_RS15785;Name=PHA56_RS15785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15785;old_locus_tag=PHA56_15785 NZ_CP116214.1 Protein Homology CDS 3297945 3298925 . - 0 ID=cds-WP_038424413.1;Parent=gene-PHA56_RS15785;Dbxref=Genbank:WP_038424413.1;Name=WP_038424413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009653047.1;locus_tag=PHA56_RS15785;product=nitronate monooxygenase;protein_id=WP_038424413.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3299083 3299967 . + . ID=gene-PHA56_RS15790;Name=PHA56_RS15790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15790;old_locus_tag=PHA56_15790 NZ_CP116214.1 Protein Homology CDS 3299083 3299967 . + 0 ID=cds-WP_014838300.1;Parent=gene-PHA56_RS15790;Dbxref=Genbank:WP_014838300.1;Name=WP_014838300.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009653016.1;locus_tag=PHA56_RS15790;product=LysR family transcriptional regulator;protein_id=WP_014838300.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3300081 3300965 . - . ID=gene-PHA56_RS15795;Name=PHA56_RS15795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15795;old_locus_tag=PHA56_15795 NZ_CP116214.1 Protein Homology CDS 3300081 3300965 . - 0 ID=cds-WP_038424411.1;Parent=gene-PHA56_RS15795;Dbxref=Genbank:WP_038424411.1;Name=WP_038424411.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226526.1;locus_tag=PHA56_RS15795;product=LysR family transcriptional regulator;protein_id=WP_038424411.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3301137 3302273 . + . ID=gene-PHA56_RS15800;Name=PHA56_RS15800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15800;old_locus_tag=PHA56_15800 NZ_CP116214.1 Protein Homology CDS 3301137 3302273 . + 0 ID=cds-WP_071889103.1;Parent=gene-PHA56_RS15800;Dbxref=Genbank:WP_071889103.1;Name=WP_071889103.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226527.1;locus_tag=PHA56_RS15800;product=alpha/beta hydrolase;protein_id=WP_071889103.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3302416 3303603 . + . ID=gene-PHA56_RS15805;Name=PHA56_RS15805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15805;old_locus_tag=PHA56_15805 NZ_CP116214.1 Protein Homology CDS 3302416 3303603 . + 0 ID=cds-WP_162763177.1;Parent=gene-PHA56_RS15805;Dbxref=Genbank:WP_162763177.1;Name=WP_162763177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004850279.1;locus_tag=PHA56_RS15805;product=MFS transporter;protein_id=WP_162763177.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3303701 3304045 . + . ID=gene-PHA56_RS15810;Name=PHA56_RS15810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15810;old_locus_tag=PHA56_15810 NZ_CP116214.1 Protein Homology CDS 3303701 3304045 . + 0 ID=cds-WP_032693677.1;Parent=gene-PHA56_RS15810;Dbxref=Genbank:WP_032693677.1;Name=WP_032693677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014838297.1;locus_tag=PHA56_RS15810;product=DUF1294 domain-containing protein;protein_id=WP_032693677.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3304147 3304872 . + . ID=gene-PHA56_RS15815;Name=PHA56_RS15815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15815;old_locus_tag=PHA56_15815 NZ_CP116214.1 Protein Homology CDS 3304147 3304872 . + 0 ID=cds-WP_038424407.1;Parent=gene-PHA56_RS15815;Dbxref=Genbank:WP_038424407.1;Name=WP_038424407.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224878.1;locus_tag=PHA56_RS15815;product=MerR family transcriptional regulator;protein_id=WP_038424407.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3305115 3305549 . + . ID=gene-PHA56_RS15820;Name=PHA56_RS15820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15820;old_locus_tag=PHA56_15820 NZ_CP116214.1 Protein Homology CDS 3305115 3305549 . + 0 ID=cds-WP_038424406.1;Parent=gene-PHA56_RS15820;Dbxref=Genbank:WP_038424406.1;Name=WP_038424406.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224877.1;locus_tag=PHA56_RS15820;product=nuclear transport factor 2 family protein;protein_id=WP_038424406.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3305546 3306265 . + . ID=gene-PHA56_RS15825;Name=PHA56_RS15825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15825;old_locus_tag=PHA56_15825 NZ_CP116214.1 Protein Homology CDS 3305546 3306265 . + 0 ID=cds-WP_038424404.1;Parent=gene-PHA56_RS15825;Dbxref=Genbank:WP_038424404.1;Name=WP_038424404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004850270.1;locus_tag=PHA56_RS15825;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_038424404.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3306262 3307521 . + . ID=gene-PHA56_RS15830;Name=PHA56_RS15830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15830;old_locus_tag=PHA56_15830 NZ_CP116214.1 Protein Homology CDS 3306262 3307521 . + 0 ID=cds-WP_038424403.1;Parent=gene-PHA56_RS15830;Dbxref=Genbank:WP_038424403.1;Name=WP_038424403.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014838294.1;locus_tag=PHA56_RS15830;product=FAD-dependent oxidoreductase;protein_id=WP_038424403.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3307523 3308245 . + . ID=gene-PHA56_RS15835;Name=PHA56_RS15835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15835;old_locus_tag=PHA56_15835 NZ_CP116214.1 Protein Homology CDS 3307523 3308245 . + 0 ID=cds-WP_014229096.1;Parent=gene-PHA56_RS15835;Dbxref=Genbank:WP_014229096.1;Name=WP_014229096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224874.1;locus_tag=PHA56_RS15835;product=DUF1365 domain-containing protein;protein_id=WP_014229096.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3308242 3309465 . + . ID=gene-PHA56_RS15840;Name=PHA56_RS15840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15840;old_locus_tag=PHA56_15840 NZ_CP116214.1 Protein Homology CDS 3308242 3309465 . + 0 ID=cds-WP_014838292.1;Parent=gene-PHA56_RS15840;Dbxref=Genbank:WP_014838292.1;Name=WP_014838292.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014838292.1;locus_tag=PHA56_RS15840;product=cyclopropane-fatty-acyl-phospholipid synthase family protein;protein_id=WP_014838292.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3309462 3309995 . + . ID=gene-PHA56_RS15845;Name=PHA56_RS15845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15845;old_locus_tag=PHA56_15845 NZ_CP116214.1 Protein Homology CDS 3309462 3309995 . + 0 ID=cds-WP_014229094.1;Parent=gene-PHA56_RS15845;Dbxref=Genbank:WP_014229094.1;Name=WP_014229094.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004112512.1;locus_tag=PHA56_RS15845;product=DUF3833 domain-containing protein;protein_id=WP_014229094.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3310010 3310969 . + . ID=gene-PHA56_RS15850;Name=PHA56_RS15850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15850;old_locus_tag=PHA56_15850 NZ_CP116214.1 Protein Homology CDS 3310010 3310969 . + 0 ID=cds-WP_076752588.1;Parent=gene-PHA56_RS15850;Dbxref=Genbank:WP_076752588.1;Name=WP_076752588.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015959355.1;locus_tag=PHA56_RS15850;product=DUF523 and DUF1722 domain-containing protein;protein_id=WP_076752588.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3311033 3312415 . - . ID=gene-PHA56_RS15855;Name=PHA56_RS15855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15855;old_locus_tag=PHA56_15855 NZ_CP116214.1 Protein Homology CDS 3311033 3312415 . - 0 ID=cds-WP_014229092.1;Parent=gene-PHA56_RS15855;Dbxref=Genbank:WP_014229092.1;Name=WP_014229092.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224868.1;locus_tag=PHA56_RS15855;product=carbohydrate porin;protein_id=WP_014229092.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3313311 3314750 . + . ID=gene-PHA56_RS15860;Name=PHA56_RS15860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15860;old_locus_tag=PHA56_15860 NZ_CP116214.1 Protein Homology CDS 3313311 3314750 . + 0 ID=cds-WP_162557343.1;Parent=gene-PHA56_RS15860;Dbxref=Genbank:WP_162557343.1;Name=WP_162557343.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224865.1;locus_tag=PHA56_RS15860;product=MFS transporter;protein_id=WP_162557343.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3314805 3316484 . + . ID=gene-PHA56_RS15865;Name=PHA56_RS15865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15865;old_locus_tag=PHA56_15865 NZ_CP116214.1 Protein Homology CDS 3314805 3316484 . + 0 ID=cds-WP_076752587.1;Parent=gene-PHA56_RS15865;Dbxref=Genbank:WP_076752587.1;Name=WP_076752587.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009653401.1;locus_tag=PHA56_RS15865;product=glycoside hydrolase family 43 protein;protein_id=WP_076752587.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3316647 3317981 . - . ID=gene-PHA56_RS15870;Name=PHA56_RS15870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15870;old_locus_tag=PHA56_15870 NZ_CP116214.1 Protein Homology CDS 3316647 3317981 . - 0 ID=cds-WP_032694511.1;Parent=gene-PHA56_RS15870;Dbxref=Genbank:WP_032694511.1;Name=WP_032694511.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009653403.1;locus_tag=PHA56_RS15870;product=VasL domain-containing protein;protein_id=WP_032694511.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3318005 3318460 . - . ID=gene-PHA56_RS15875;Name=tssE;gbkey=Gene;gene=tssE;gene_biotype=protein_coding;locus_tag=PHA56_RS15875;old_locus_tag=PHA56_15875 NZ_CP116214.1 Protein Homology CDS 3318005 3318460 . - 0 ID=cds-WP_014838282.1;Parent=gene-PHA56_RS15875;Dbxref=Genbank:WP_014838282.1;Name=WP_014838282.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssE;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004850246.1;locus_tag=PHA56_RS15875;product=type VI secretion system baseplate subunit TssE;protein_id=WP_014838282.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3318462 3318959 . - . ID=gene-PHA56_RS15880;Name=tssJ;gbkey=Gene;gene=tssJ;gene_biotype=protein_coding;locus_tag=PHA56_RS15880;old_locus_tag=PHA56_15880 NZ_CP116214.1 Protein Homology CDS 3318462 3318959 . - 0 ID=cds-WP_047935122.1;Parent=gene-PHA56_RS15880;Dbxref=Genbank:WP_047935122.1;Name=WP_047935122.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssJ;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004101511.1;locus_tag=PHA56_RS15880;product=type VI secretion system lipoprotein TssJ;protein_id=WP_047935122.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3318979 3320064 . - . ID=gene-PHA56_RS15885;Name=tssG;gbkey=Gene;gene=tssG;gene_biotype=protein_coding;locus_tag=PHA56_RS15885;old_locus_tag=PHA56_15885 NZ_CP116214.1 Protein Homology CDS 3318979 3320064 . - 0 ID=cds-WP_032694508.1;Parent=gene-PHA56_RS15885;Dbxref=Genbank:WP_032694508.1;Name=WP_032694508.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssG;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014838280.1;locus_tag=PHA56_RS15885;product=type VI secretion system baseplate subunit TssG;protein_id=WP_032694508.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3320028 3321788 . - . ID=gene-PHA56_RS15890;Name=tssF;gbkey=Gene;gene=tssF;gene_biotype=protein_coding;locus_tag=PHA56_RS15890;old_locus_tag=PHA56_15890 NZ_CP116214.1 Protein Homology CDS 3320028 3321788 . - 0 ID=cds-WP_042945026.1;Parent=gene-PHA56_RS15890;Dbxref=Genbank:WP_042945026.1;Name=WP_042945026.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssF;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226617.1;locus_tag=PHA56_RS15890;product=type VI secretion system baseplate subunit TssF;protein_id=WP_042945026.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3322009 3325377 . - . ID=gene-PHA56_RS15895;Name=PHA56_RS15895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15895;old_locus_tag=PHA56_15895 NZ_CP116214.1 Protein Homology CDS 3322009 3325377 . - 0 ID=cds-WP_038424392.1;Parent=gene-PHA56_RS15895;Dbxref=Genbank:WP_038424392.1;Name=WP_038424392.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004114148.1;locus_tag=PHA56_RS15895;product=ImcF-related family protein;protein_id=WP_038424392.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3325384 3326817 . - . ID=gene-PHA56_RS15900;Name=PHA56_RS15900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15900;old_locus_tag=PHA56_15900 NZ_CP116214.1 Protein Homology CDS 3325384 3326817 . - 0 ID=cds-WP_032694505.1;Parent=gene-PHA56_RS15900;Dbxref=Genbank:WP_032694505.1;Name=WP_032694505.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014838276.1;locus_tag=PHA56_RS15900;product=hypothetical protein;protein_id=WP_032694505.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3326817 3327077 . - . ID=gene-PHA56_RS15905;Name=PHA56_RS15905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15905;old_locus_tag=PHA56_15905 NZ_CP116214.1 Protein Homology CDS 3326817 3327077 . - 0 ID=cds-WP_014229081.1;Parent=gene-PHA56_RS15905;Dbxref=Genbank:WP_014229081.1;Name=WP_014229081.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001533568.1;locus_tag=PHA56_RS15905;product=PAAR domain-containing protein;protein_id=WP_014229081.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3327079 3329046 . - . ID=gene-PHA56_RS15910;Name=PHA56_RS15910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15910;old_locus_tag=PHA56_15910 NZ_CP116214.1 Protein Homology CDS 3327079 3329046 . - 0 ID=cds-WP_038424390.1;Parent=gene-PHA56_RS15910;Dbxref=Genbank:WP_038424390.1;Name=WP_038424390.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014838275.1;locus_tag=PHA56_RS15910;product=membrane protein;protein_id=WP_038424390.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3329299 3331794 . - . ID=gene-PHA56_RS15915;Name=vgrG;gbkey=Gene;gene=vgrG;gene_biotype=protein_coding;locus_tag=PHA56_RS15915;old_locus_tag=PHA56_15915 NZ_CP116214.1 Protein Homology CDS 3329299 3331794 . - 0 ID=cds-WP_038424388.1;Parent=gene-PHA56_RS15915;Dbxref=Genbank:WP_038424388.1;Name=WP_038424388.1;gbkey=CDS;gene=vgrG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014838274.1;locus_tag=PHA56_RS15915;product=type VI secretion system Vgr family protein;protein_id=WP_038424388.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3331791 3334433 . - . ID=gene-PHA56_RS15920;Name=tssH;gbkey=Gene;gene=tssH;gene_biotype=protein_coding;locus_tag=PHA56_RS15920;old_locus_tag=PHA56_15920 NZ_CP116214.1 Protein Homology CDS 3331791 3334433 . - 0 ID=cds-WP_042945025.1;Parent=gene-PHA56_RS15920;Dbxref=Genbank:WP_042945025.1;Name=WP_042945025.1;Ontology_term=GO:0033103,GO:0016887,GO:0033104;gbkey=CDS;gene=tssH;go_component=type VI protein secretion system complex|0033104||IEA;go_function=ATP hydrolysis activity|0016887||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229075.1;locus_tag=PHA56_RS15920;product=type VI secretion system ATPase TssH;protein_id=WP_042945025.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3334681 3335172 . - . ID=gene-PHA56_RS15925;Name=hcp;gbkey=Gene;gene=hcp;gene_biotype=protein_coding;locus_tag=PHA56_RS15925;old_locus_tag=PHA56_15925 NZ_CP116214.1 Protein Homology CDS 3334681 3335172 . - 0 ID=cds-WP_014229074.1;Parent=gene-PHA56_RS15925;Dbxref=Genbank:WP_014229074.1;Name=WP_014229074.1;gbkey=CDS;gene=hcp;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226602.1;locus_tag=PHA56_RS15925;product=type VI secretion system effector Hcp;protein_id=WP_014229074.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3335317 3337005 . - . ID=gene-PHA56_RS15930;Name=PHA56_RS15930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15930;old_locus_tag=PHA56_15930 NZ_CP116214.1 Protein Homology CDS 3335317 3337005 . - 0 ID=cds-WP_038424383.1;Parent=gene-PHA56_RS15930;Dbxref=Genbank:WP_038424383.1;Name=WP_038424383.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229073.1;locus_tag=PHA56_RS15930;product=OmpA family protein;protein_id=WP_038424383.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3337002 3337667 . - . ID=gene-PHA56_RS15935;Name=tssL;gbkey=Gene;gene=tssL;gene_biotype=protein_coding;locus_tag=PHA56_RS15935;old_locus_tag=PHA56_15935 NZ_CP116214.1 Protein Homology CDS 3337002 3337667 . - 0 ID=cds-WP_014229072.1;Parent=gene-PHA56_RS15935;Dbxref=Genbank:WP_014229072.1;Name=WP_014229072.1;gbkey=CDS;gene=tssL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004101485.1;locus_tag=PHA56_RS15935;product=type VI secretion system protein TssL%2C short form;protein_id=WP_014229072.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3337664 3339007 . - . ID=gene-PHA56_RS15940;Name=tssK;gbkey=Gene;gene=tssK;gene_biotype=protein_coding;locus_tag=PHA56_RS15940;old_locus_tag=PHA56_15940 NZ_CP116214.1 Protein Homology CDS 3337664 3339007 . - 0 ID=cds-WP_119834412.1;Parent=gene-PHA56_RS15940;Dbxref=Genbank:WP_119834412.1;Name=WP_119834412.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssK;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006810798.1;locus_tag=PHA56_RS15940;product=type VI secretion system baseplate subunit TssK;protein_id=WP_119834412.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3339021 3340556 . - . ID=gene-PHA56_RS15945;Name=tssC;gbkey=Gene;gene=tssC;gene_biotype=protein_coding;locus_tag=PHA56_RS15945;old_locus_tag=PHA56_15945 NZ_CP116214.1 Protein Homology CDS 3339021 3340556 . - 0 ID=cds-WP_025108179.1;Parent=gene-PHA56_RS15945;Dbxref=Genbank:WP_025108179.1;Name=WP_025108179.1;Ontology_term=GO:0033103,GO:0003674,GO:0033104;gbkey=CDS;gene=tssC;go_component=type VI protein secretion system complex|0033104||IEA;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226598.1;locus_tag=PHA56_RS15945;product=type VI secretion system contractile sheath large subunit;protein_id=WP_025108179.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3340597 3341088 . - . ID=gene-PHA56_RS15950;Name=tssB;gbkey=Gene;gene=tssB;gene_biotype=protein_coding;locus_tag=PHA56_RS15950;old_locus_tag=PHA56_15950 NZ_CP116214.1 Protein Homology CDS 3340597 3341088 . - 0 ID=cds-WP_042945023.1;Parent=gene-PHA56_RS15950;Dbxref=Genbank:WP_042945023.1;Name=WP_042945023.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssB;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226597.1;locus_tag=PHA56_RS15950;product=type VI secretion system contractile sheath small subunit;protein_id=WP_042945023.1;transl_table=11 NZ_CP116214.1 RefSeq pseudogene 3341700 3341855 . - . ID=gene-PHA56_RS15955;Name=PHA56_RS15955;end_range=3341855,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS15955;old_locus_tag=PHA56_15955;partial=true;pseudo=true NZ_CP116214.1 Protein Homology CDS 3341700 3341855 . - 0 ID=cds-PHA56_RS15955;Parent=gene-PHA56_RS15955;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=3341855,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014832110.1;locus_tag=PHA56_RS15955;partial=true;product=NmrA/HSCARG family protein;pseudo=true;transl_table=11 NZ_CP116214.1 RefSeq gene 3341922 3342485 . + . ID=gene-PHA56_RS15960;Name=PHA56_RS15960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15960;old_locus_tag=PHA56_15960 NZ_CP116214.1 Protein Homology CDS 3341922 3342485 . + 0 ID=cds-WP_014229067.1;Parent=gene-PHA56_RS15960;Dbxref=Genbank:WP_014229067.1;Name=WP_014229067.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229067.1;locus_tag=PHA56_RS15960;product=DJ-1/PfpI family protein;protein_id=WP_014229067.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3342764 3343540 . - . ID=gene-PHA56_RS15965;Name=PHA56_RS15965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15965;old_locus_tag=PHA56_15965 NZ_CP116214.1 Protein Homology CDS 3342764 3343540 . - 0 ID=cds-WP_014229066.1;Parent=gene-PHA56_RS15965;Dbxref=Genbank:WP_014229066.1;Name=WP_014229066.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004857070.1;locus_tag=PHA56_RS15965;product=ABC transporter ATP-binding protein;protein_id=WP_014229066.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3343540 3344310 . - . ID=gene-PHA56_RS15970;Name=PHA56_RS15970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15970;old_locus_tag=PHA56_15970 NZ_CP116214.1 Protein Homology CDS 3343540 3344310 . - 0 ID=cds-WP_014229065.1;Parent=gene-PHA56_RS15970;Dbxref=Genbank:WP_014229065.1;Name=WP_014229065.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010427482.1;locus_tag=PHA56_RS15970;product=ABC transporter permease;protein_id=WP_014229065.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3344307 3345314 . - . ID=gene-PHA56_RS15975;Name=PHA56_RS15975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15975;old_locus_tag=PHA56_15975 NZ_CP116214.1 Protein Homology CDS 3344307 3345314 . - 0 ID=cds-WP_014229064.1;Parent=gene-PHA56_RS15975;Dbxref=Genbank:WP_014229064.1;Name=WP_014229064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010427483.1;locus_tag=PHA56_RS15975;product=glycine betaine ABC transporter substrate-binding protein;protein_id=WP_014229064.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3345343 3346062 . - . ID=gene-PHA56_RS15980;Name=PHA56_RS15980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15980;old_locus_tag=PHA56_15980 NZ_CP116214.1 Protein Homology CDS 3345343 3346062 . - 0 ID=cds-WP_014229063.1;Parent=gene-PHA56_RS15980;Dbxref=Genbank:WP_014229063.1;Name=WP_014229063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229063.1;locus_tag=PHA56_RS15980;product=aspartate/glutamate racemase family protein;protein_id=WP_014229063.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3346059 3347072 . - . ID=gene-PHA56_RS15985;Name=PHA56_RS15985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15985;old_locus_tag=PHA56_15985 NZ_CP116214.1 Protein Homology CDS 3346059 3347072 . - 0 ID=cds-WP_014229062.1;Parent=gene-PHA56_RS15985;Dbxref=Genbank:WP_014229062.1;Name=WP_014229062.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014838263.1;locus_tag=PHA56_RS15985;product=D-cysteine desulfhydrase;protein_id=WP_014229062.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3347323 3348345 . - . ID=gene-PHA56_RS15990;Name=PHA56_RS15990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15990;old_locus_tag=PHA56_15990 NZ_CP116214.1 Protein Homology CDS 3347323 3348345 . - 0 ID=cds-WP_014838262.1;Parent=gene-PHA56_RS15990;Dbxref=Genbank:WP_014838262.1;Name=WP_014838262.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014838262.1;locus_tag=PHA56_RS15990;product=malate/lactate/ureidoglycolate dehydrogenase;protein_id=WP_014838262.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3348588 3349595 . + . ID=gene-PHA56_RS15995;Name=PHA56_RS15995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS15995;old_locus_tag=PHA56_15995 NZ_CP116214.1 Protein Homology CDS 3348588 3349595 . + 0 ID=cds-WP_014229060.1;Parent=gene-PHA56_RS15995;Dbxref=Genbank:WP_014229060.1;Name=WP_014229060.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229060.1;locus_tag=PHA56_RS15995;product=ABC transporter substrate-binding protein;protein_id=WP_014229060.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3349617 3350459 . + . ID=gene-PHA56_RS16000;Name=PHA56_RS16000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS16000;old_locus_tag=PHA56_16000 NZ_CP116214.1 Protein Homology CDS 3349617 3350459 . + 0 ID=cds-WP_014838260.1;Parent=gene-PHA56_RS16000;Dbxref=Genbank:WP_014838260.1;Name=WP_014838260.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229059.1;locus_tag=PHA56_RS16000;product=ABC transporter ATP-binding protein;protein_id=WP_014838260.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3350431 3351297 . + . ID=gene-PHA56_RS16005;Name=PHA56_RS16005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS16005;old_locus_tag=PHA56_16005 NZ_CP116214.1 Protein Homology CDS 3350431 3351297 . + 0 ID=cds-WP_076752556.1;Parent=gene-PHA56_RS16005;Dbxref=Genbank:WP_076752556.1;Name=WP_076752556.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004384960.1;locus_tag=PHA56_RS16005;product=ABC transporter permease;protein_id=WP_076752556.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3351487 3352965 . - . ID=gene-PHA56_RS16010;Name=PHA56_RS16010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS16010;old_locus_tag=PHA56_16010 NZ_CP116214.1 Protein Homology CDS 3351487 3352965 . - 0 ID=cds-WP_014229057.1;Parent=gene-PHA56_RS16010;Dbxref=Genbank:WP_014229057.1;Name=WP_014229057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012967644.1;locus_tag=PHA56_RS16010;product=cysteine desulfurase;protein_id=WP_014229057.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3352952 3353896 . - . ID=gene-PHA56_RS16015;Name=PHA56_RS16015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS16015;old_locus_tag=PHA56_16015 NZ_CP116214.1 Protein Homology CDS 3352952 3353896 . - 0 ID=cds-WP_014229056.1;Parent=gene-PHA56_RS16015;Dbxref=Genbank:WP_014229056.1;Name=WP_014229056.1;Ontology_term=GO:0140737;gbkey=CDS;go_component=encapsulin nanocompartment|0140737||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229056.1;locus_tag=PHA56_RS16015;product=family 2A encapsulin nanocompartment shell protein;protein_id=WP_014229056.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3353934 3355109 . - . ID=gene-PHA56_RS16020;Name=moeB;gbkey=Gene;gene=moeB;gene_biotype=protein_coding;locus_tag=PHA56_RS16020;old_locus_tag=PHA56_16020 NZ_CP116214.1 Protein Homology CDS 3353934 3355109 . - 0 ID=cds-WP_014229055.1;Parent=gene-PHA56_RS16020;Dbxref=Genbank:WP_014229055.1;Name=WP_014229055.1;Ontology_term=GO:0008641;gbkey=CDS;gene=moeB;go_function=ubiquitin-like modifier activating enzyme activity|0008641||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008804181.1;locus_tag=PHA56_RS16020;product=molybdopterin-synthase adenylyltransferase MoeB;protein_id=WP_014229055.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3355106 3355396 . - . ID=gene-PHA56_RS16025;Name=PHA56_RS16025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS16025;old_locus_tag=PHA56_16025 NZ_CP116214.1 Protein Homology CDS 3355106 3355396 . - 0 ID=cds-WP_014229054.1;Parent=gene-PHA56_RS16025;Dbxref=Genbank:WP_014229054.1;Name=WP_014229054.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229054.1;locus_tag=PHA56_RS16025;product=MoaD/ThiS family protein;protein_id=WP_014229054.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3355456 3355884 . - . ID=gene-PHA56_RS16030;Name=PHA56_RS16030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS16030;old_locus_tag=PHA56_16030 NZ_CP116214.1 Protein Homology CDS 3355456 3355884 . - 0 ID=cds-WP_014229053.1;Parent=gene-PHA56_RS16030;Dbxref=Genbank:WP_014229053.1;Name=WP_014229053.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229053.1;locus_tag=PHA56_RS16030;product=M67 family metallopeptidase;protein_id=WP_014229053.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3355877 3356782 . - . ID=gene-PHA56_RS16035;Name=PHA56_RS16035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS16035;old_locus_tag=PHA56_16035 NZ_CP116214.1 Protein Homology CDS 3355877 3356782 . - 0 ID=cds-WP_014229052.1;Parent=gene-PHA56_RS16035;Dbxref=Genbank:WP_014229052.1;Name=WP_014229052.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229052.1;locus_tag=PHA56_RS16035;product=PLP-dependent cysteine synthase family protein;protein_id=WP_014229052.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3356850 3357806 . - . ID=gene-PHA56_RS16040;Name=PHA56_RS16040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS16040;old_locus_tag=PHA56_16040 NZ_CP116214.1 Protein Homology CDS 3356850 3357806 . - 0 ID=cds-WP_014229051.1;Parent=gene-PHA56_RS16040;Dbxref=Genbank:WP_014229051.1;Name=WP_014229051.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014838256.1;locus_tag=PHA56_RS16040;product=serine acetyltransferase;protein_id=WP_014229051.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3358186 3358971 . + . ID=gene-PHA56_RS16045;Name=PHA56_RS16045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS16045;old_locus_tag=PHA56_16045 NZ_CP116214.1 Protein Homology CDS 3358186 3358971 . + 0 ID=cds-WP_076752555.1;Parent=gene-PHA56_RS16045;Dbxref=Genbank:WP_076752555.1;Name=WP_076752555.1;Ontology_term=GO:0008152,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229050.1;locus_tag=PHA56_RS16045;product=HAD-IIB family hydrolase;protein_id=WP_076752555.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3359523 3360218 . + . ID=gene-PHA56_RS16050;Name=PHA56_RS16050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS16050;old_locus_tag=PHA56_16050 NZ_CP116214.1 Protein Homology CDS 3359523 3360218 . + 0 ID=cds-WP_014229048.1;Parent=gene-PHA56_RS16050;Dbxref=Genbank:WP_014229048.1;Name=WP_014229048.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007372446.1;locus_tag=PHA56_RS16050;product=amino acid ABC transporter permease;protein_id=WP_014229048.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3360196 3360948 . + . ID=gene-PHA56_RS16055;Name=PHA56_RS16055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS16055;old_locus_tag=PHA56_16055 NZ_CP116214.1 Protein Homology CDS 3360196 3360948 . + 0 ID=cds-WP_014838254.1;Parent=gene-PHA56_RS16055;Dbxref=Genbank:WP_014838254.1;Name=WP_014838254.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229047.1;locus_tag=PHA56_RS16055;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_014838254.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3360988 3361758 . + . ID=gene-PHA56_RS16060;Name=PHA56_RS16060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS16060;old_locus_tag=PHA56_16060 NZ_CP116214.1 Protein Homology CDS 3360988 3361758 . + 0 ID=cds-WP_014229046.1;Parent=gene-PHA56_RS16060;Dbxref=Genbank:WP_014229046.1;Name=WP_014229046.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004155786.1;locus_tag=PHA56_RS16060;product=amino acid ABC transporter substrate-binding protein;protein_id=WP_014229046.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3361922 3362467 . + . ID=gene-PHA56_RS16065;Name=PHA56_RS16065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS16065;old_locus_tag=PHA56_16065 NZ_CP116214.1 Protein Homology CDS 3361922 3362467 . + 0 ID=cds-WP_170873306.1;Parent=gene-PHA56_RS16065;Dbxref=Genbank:WP_170873306.1;Name=WP_170873306.1;Ontology_term=GO:0046417;gbkey=CDS;go_process=chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007372443.1;locus_tag=PHA56_RS16065;product=chorismate mutase;protein_id=WP_170873306.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3362837 3363571 . - . ID=gene-PHA56_RS16070;Name=PHA56_RS16070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS16070;old_locus_tag=PHA56_16070 NZ_CP116214.1 Protein Homology CDS 3362837 3363571 . - 0 ID=cds-WP_014838252.1;Parent=gene-PHA56_RS16070;Dbxref=Genbank:WP_014838252.1;Name=WP_014838252.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014838252.1;locus_tag=PHA56_RS16070;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_014838252.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3363568 3364338 . - . ID=gene-PHA56_RS16075;Name=PHA56_RS16075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS16075;old_locus_tag=PHA56_16075 NZ_CP116214.1 Protein Homology CDS 3363568 3364338 . - 0 ID=cds-WP_032692713.1;Parent=gene-PHA56_RS16075;Dbxref=Genbank:WP_032692713.1;Name=WP_032692713.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013317407.1;locus_tag=PHA56_RS16075;product=amino acid ABC transporter permease;protein_id=WP_032692713.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3364344 3365039 . - . ID=gene-PHA56_RS16080;Name=PHA56_RS16080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS16080;old_locus_tag=PHA56_16080 NZ_CP116214.1 Protein Homology CDS 3364344 3365039 . - 0 ID=cds-WP_038424372.1;Parent=gene-PHA56_RS16080;Dbxref=Genbank:WP_038424372.1;Name=WP_038424372.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004222853.1;locus_tag=PHA56_RS16080;product=amino acid ABC transporter permease;protein_id=WP_038424372.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3365062 3365814 . - . ID=gene-PHA56_RS16085;Name=PHA56_RS16085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS16085;old_locus_tag=PHA56_16085 NZ_CP116214.1 Protein Homology CDS 3365062 3365814 . - 0 ID=cds-WP_032692715.1;Parent=gene-PHA56_RS16085;Dbxref=Genbank:WP_032692715.1;Name=WP_032692715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019846067.1;locus_tag=PHA56_RS16085;product=SDR family oxidoreductase;protein_id=WP_032692715.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3365937 3366398 . - . ID=gene-PHA56_RS16090;Name=PHA56_RS16090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS16090;old_locus_tag=PHA56_16090 NZ_CP116214.1 Protein Homology CDS 3365937 3366398 . - 0 ID=cds-WP_224255744.1;Parent=gene-PHA56_RS16090;Dbxref=Genbank:WP_224255744.1;Name=WP_224255744.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013317404.1;locus_tag=PHA56_RS16090;product=acetyl-CoA carboxylase biotin carboxyl carrier protein subunit;protein_id=WP_224255744.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3366462 3367385 . - . ID=gene-PHA56_RS16095;Name=nac;gbkey=Gene;gene=nac;gene_biotype=protein_coding;locus_tag=PHA56_RS16095;old_locus_tag=PHA56_16095 NZ_CP116214.1 Protein Homology CDS 3366462 3367385 . - 0 ID=cds-WP_014838248.1;Parent=gene-PHA56_RS16095;Dbxref=Genbank:WP_014838248.1;Name=WP_014838248.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=nac;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019846065.1;locus_tag=PHA56_RS16095;product=nitrogen assimilation transcriptional regulator NAC;protein_id=WP_014838248.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3367723 3368925 . + . ID=gene-PHA56_RS16100;Name=PHA56_RS16100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS16100;old_locus_tag=PHA56_16100 NZ_CP116214.1 Protein Homology CDS 3367723 3368925 . + 0 ID=cds-WP_014838247.1;Parent=gene-PHA56_RS16100;Dbxref=Genbank:WP_014838247.1;Name=WP_014838247.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004222844.1;locus_tag=PHA56_RS16100;product=pyridoxal phosphate-dependent aminotransferase;protein_id=WP_014838247.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3369081 3369851 . - . ID=gene-PHA56_RS16105;Name=PHA56_RS16105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS16105;old_locus_tag=PHA56_16105 NZ_CP116214.1 Protein Homology CDS 3369081 3369851 . - 0 ID=cds-WP_032692769.1;Parent=gene-PHA56_RS16105;Dbxref=Genbank:WP_032692769.1;Name=WP_032692769.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004222843.1;locus_tag=PHA56_RS16105;product=5-oxoprolinase subunit PxpA;protein_id=WP_032692769.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3369858 3370844 . - . ID=gene-PHA56_RS16110;Name=PHA56_RS16110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS16110;old_locus_tag=PHA56_16110 NZ_CP116214.1 Protein Homology CDS 3369858 3370844 . - 0 ID=cds-WP_032692719.1;Parent=gene-PHA56_RS16110;Dbxref=Genbank:WP_032692719.1;Name=WP_032692719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014838245.1;locus_tag=PHA56_RS16110;product=biotin-dependent carboxyltransferase family protein;protein_id=WP_032692719.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3370841 3371530 . - . ID=gene-PHA56_RS16115;Name=pxpB;gbkey=Gene;gene=pxpB;gene_biotype=protein_coding;locus_tag=PHA56_RS16115;old_locus_tag=PHA56_16115 NZ_CP116214.1 Protein Homology CDS 3370841 3371530 . - 0 ID=cds-WP_014838244.1;Parent=gene-PHA56_RS16115;Dbxref=Genbank:WP_014838244.1;Name=WP_014838244.1;gbkey=CDS;gene=pxpB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013317399.1;locus_tag=PHA56_RS16115;product=5-oxoprolinase subunit PxpB;protein_id=WP_014838244.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3371534 3372370 . - . ID=gene-PHA56_RS16120;Name=PHA56_RS16120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS16120;old_locus_tag=PHA56_16120 NZ_CP116214.1 Protein Homology CDS 3371534 3372370 . - 0 ID=cds-WP_038424370.1;Parent=gene-PHA56_RS16120;Dbxref=Genbank:WP_038424370.1;Name=WP_038424370.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012770286.1;locus_tag=PHA56_RS16120;product=ABC transporter substrate-binding protein;protein_id=WP_038424370.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3372666 3373583 . + . ID=gene-PHA56_RS16125;Name=PHA56_RS16125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS16125;old_locus_tag=PHA56_16125 NZ_CP116214.1 Protein Homology CDS 3372666 3373583 . + 0 ID=cds-WP_014838242.1;Parent=gene-PHA56_RS16125;Dbxref=Genbank:WP_014838242.1;Name=WP_014838242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011095945.1;locus_tag=PHA56_RS16125;product=DMT family transporter;protein_id=WP_014838242.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3373719 3374990 . - . ID=gene-PHA56_RS16130;Name=PHA56_RS16130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS16130;old_locus_tag=PHA56_16130 NZ_CP116214.1 Protein Homology CDS 3373719 3374990 . - 0 ID=cds-WP_032692722.1;Parent=gene-PHA56_RS16130;Dbxref=Genbank:WP_032692722.1;Name=WP_032692722.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009636184.1;locus_tag=PHA56_RS16130;product=Glu/Leu/Phe/Val dehydrogenase;protein_id=WP_032692722.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3375231 3376580 . - . ID=gene-PHA56_RS16135;Name=accC;gbkey=Gene;gene=accC;gene_biotype=protein_coding;locus_tag=PHA56_RS16135;old_locus_tag=PHA56_16135 NZ_CP116214.1 Protein Homology CDS 3375231 3376580 . - 0 ID=cds-WP_119834413.1;Parent=gene-PHA56_RS16135;Dbxref=Genbank:WP_119834413.1;Name=WP_119834413.1;Ontology_term=GO:0006633,GO:0003989,GO:0004075,GO:0009317;gbkey=CDS;gene=accC;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA,biotin carboxylase activity|0004075||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009483995.1;locus_tag=PHA56_RS16135;product=acetyl-CoA carboxylase biotin carboxylase subunit;protein_id=WP_119834413.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3376591 3377055 . - . ID=gene-PHA56_RS16140;Name=accB;gbkey=Gene;gene=accB;gene_biotype=protein_coding;locus_tag=PHA56_RS16140;old_locus_tag=PHA56_16140 NZ_CP116214.1 Protein Homology CDS 3376591 3377055 . - 0 ID=cds-WP_032692724.1;Parent=gene-PHA56_RS16140;Dbxref=Genbank:WP_032692724.1;Name=WP_032692724.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accB;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229096.1;locus_tag=PHA56_RS16140;product=acetyl-CoA carboxylase biotin carboxyl carrier protein;protein_id=WP_032692724.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3377488 3378204 . - . ID=gene-PHA56_RS16145;Name=PHA56_RS16145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS16145;old_locus_tag=PHA56_16145 NZ_CP116214.1 Protein Homology CDS 3377488 3378204 . - 0 ID=cds-WP_014838238.1;Parent=gene-PHA56_RS16145;Dbxref=Genbank:WP_014838238.1;Name=WP_014838238.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014838238.1;locus_tag=PHA56_RS16145;product=GntR family transcriptional regulator;protein_id=WP_014838238.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3378323 3379117 . + . ID=gene-PHA56_RS16150;Name=PHA56_RS16150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS16150;old_locus_tag=PHA56_16150 NZ_CP116214.1 Protein Homology CDS 3378323 3379117 . + 0 ID=cds-WP_050595113.1;Parent=gene-PHA56_RS16150;Dbxref=Genbank:WP_050595113.1;Name=WP_050595113.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017348618.1;locus_tag=PHA56_RS16150;product=ABC transporter ATP-binding protein;protein_id=WP_050595113.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3379138 3380133 . + . ID=gene-PHA56_RS16155;Name=PHA56_RS16155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS16155;old_locus_tag=PHA56_16155 NZ_CP116214.1 Protein Homology CDS 3379138 3380133 . + 0 ID=cds-WP_014229041.1;Parent=gene-PHA56_RS16155;Dbxref=Genbank:WP_014229041.1;Name=WP_014229041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229041.1;locus_tag=PHA56_RS16155;product=ABC transporter substrate-binding protein;protein_id=WP_014229041.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3380130 3380876 . + . ID=gene-PHA56_RS16160;Name=PHA56_RS16160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS16160;old_locus_tag=PHA56_16160 NZ_CP116214.1 Protein Homology CDS 3380130 3380876 . + 0 ID=cds-WP_014229040.1;Parent=gene-PHA56_RS16160;Dbxref=Genbank:WP_014229040.1;Name=WP_014229040.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229040.1;locus_tag=PHA56_RS16160;product=ABC transporter permease;protein_id=WP_014229040.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3380890 3383253 . + . ID=gene-PHA56_RS16165;Name=PHA56_RS16165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS16165;old_locus_tag=PHA56_16165 NZ_CP116214.1 Protein Homology CDS 3380890 3383253 . + 0 ID=cds-WP_271292921.1;Parent=gene-PHA56_RS16165;Dbxref=Genbank:WP_271292921.1;Name=WP_271292921.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229039.1;locus_tag=PHA56_RS16165;product=hypothetical protein;protein_id=WP_271292921.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3383583 3384806 . - . ID=gene-PHA56_RS16170;Name=PHA56_RS16170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS16170;old_locus_tag=PHA56_16170 NZ_CP116214.1 Protein Homology CDS 3383583 3384806 . - 0 ID=cds-WP_014229038.1;Parent=gene-PHA56_RS16170;Dbxref=Genbank:WP_014229038.1;Name=WP_014229038.1;Ontology_term=GO:0016627,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228519.1;locus_tag=PHA56_RS16170;product=acyl-CoA dehydrogenase family protein;protein_id=WP_014229038.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3384817 3386238 . - . ID=gene-PHA56_RS16175;Name=PHA56_RS16175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS16175;old_locus_tag=PHA56_16175 NZ_CP116214.1 Protein Homology CDS 3384817 3386238 . - 0 ID=cds-WP_014229037.1;Parent=gene-PHA56_RS16175;Dbxref=Genbank:WP_014229037.1;Name=WP_014229037.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015585853.1;locus_tag=PHA56_RS16175;product=MFS transporter;protein_id=WP_014229037.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3386414 3387292 . - . ID=gene-PHA56_RS16180;Name=PHA56_RS16180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS16180;old_locus_tag=PHA56_16180 NZ_CP116214.1 Protein Homology CDS 3386414 3387292 . - 0 ID=cds-WP_014229036.1;Parent=gene-PHA56_RS16180;Dbxref=Genbank:WP_014229036.1;Name=WP_014229036.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007886131.1;locus_tag=PHA56_RS16180;product=MetQ/NlpA family ABC transporter substrate-binding protein;protein_id=WP_014229036.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3387289 3387987 . - . ID=gene-PHA56_RS16185;Name=PHA56_RS16185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS16185;old_locus_tag=PHA56_16185 NZ_CP116214.1 Protein Homology CDS 3387289 3387987 . - 0 ID=cds-WP_014229035.1;Parent=gene-PHA56_RS16185;Dbxref=Genbank:WP_014229035.1;Name=WP_014229035.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007372545.1;locus_tag=PHA56_RS16185;product=ABC transporter permease;protein_id=WP_014229035.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3387984 3389003 . - . ID=gene-PHA56_RS16190;Name=PHA56_RS16190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS16190;old_locus_tag=PHA56_16190 NZ_CP116214.1 Protein Homology CDS 3387984 3389003 . - 0 ID=cds-WP_014229034.1;Parent=gene-PHA56_RS16190;Dbxref=Genbank:WP_014229034.1;Name=WP_014229034.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228523.1;locus_tag=PHA56_RS16190;product=methionine ABC transporter ATP-binding protein;protein_id=WP_014229034.1;transl_table=11 NZ_CP116214.1 RefSeq pseudogene 3389000 3389476 . - . ID=gene-PHA56_RS16195;Name=PHA56_RS16195;end_range=3389476,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS16195;old_locus_tag=PHA56_16195;partial=true;pseudo=true NZ_CP116214.1 Protein Homology CDS 3389000 3389476 . - 0 ID=cds-PHA56_RS16195;Parent=gene-PHA56_RS16195;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=3389476,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009651628.1;locus_tag=PHA56_RS16195;partial=true;product=coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase-like protein;pseudo=true;transl_table=11 NZ_CP116214.1 RefSeq gene 3390055 3391671 . - . ID=gene-PHA56_RS16200;Name=PHA56_RS16200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS16200;old_locus_tag=PHA56_16200 NZ_CP116214.1 Protein Homology CDS 3390055 3391671 . - 0 ID=cds-WP_009653393.1;Parent=gene-PHA56_RS16200;Dbxref=Genbank:WP_009653393.1;Name=WP_009653393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226523.1;locus_tag=PHA56_RS16200;product=peptide ABC transporter substrate-binding protein;protein_id=WP_009653393.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3391861 3392574 . + . ID=gene-PHA56_RS16205;Name=mpaA;gbkey=Gene;gene=mpaA;gene_biotype=protein_coding;locus_tag=PHA56_RS16205;old_locus_tag=PHA56_16205 NZ_CP116214.1 Protein Homology CDS 3391861 3392574 . + 0 ID=cds-WP_004850230.1;Parent=gene-PHA56_RS16205;Dbxref=Genbank:WP_004850230.1;Name=WP_004850230.1;Ontology_term=GO:0006508,GO:0004181,GO:0008270;gbkey=CDS;gene=mpaA;go_function=metallocarboxypeptidase activity|0004181||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017146042.1;locus_tag=PHA56_RS16205;product=murein tripeptide amidase MpaA;protein_id=WP_004850230.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3392565 3393530 . - . ID=gene-PHA56_RS16210;Name=ycjG;gbkey=Gene;gene=ycjG;gene_biotype=protein_coding;locus_tag=PHA56_RS16210;old_locus_tag=PHA56_16210 NZ_CP116214.1 Protein Homology CDS 3392565 3393530 . - 0 ID=cds-WP_014229032.1;Parent=gene-PHA56_RS16210;Dbxref=Genbank:WP_014229032.1;Name=WP_014229032.1;Ontology_term=GO:0009063,GO:0016855;gbkey=CDS;gene=ycjG;go_function=racemase and epimerase activity%2C acting on amino acids and derivatives|0016855||IEA;go_process=amino acid catabolic process|0009063||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226520.1;locus_tag=PHA56_RS16210;product=L-Ala-D/L-Glu epimerase;protein_id=WP_014229032.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3393632 3394138 . + . ID=gene-PHA56_RS16215;Name=tpx;gbkey=Gene;gene=tpx;gene_biotype=protein_coding;locus_tag=PHA56_RS16215;old_locus_tag=PHA56_16215 NZ_CP116214.1 Protein Homology CDS 3393632 3394138 . + 0 ID=cds-WP_004850226.1;Parent=gene-PHA56_RS16215;Dbxref=Genbank:WP_004850226.1;Name=WP_004850226.1;Ontology_term=GO:0008379,GO:0016684;gbkey=CDS;gene=tpx;go_function=thioredoxin peroxidase activity|0008379||IEA,oxidoreductase activity%2C acting on peroxide as acceptor|0016684||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226519.1;locus_tag=PHA56_RS16215;product=thiol peroxidase;protein_id=WP_004850226.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3394184 3395239 . - . ID=gene-PHA56_RS16220;Name=PHA56_RS16220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS16220;old_locus_tag=PHA56_16220 NZ_CP116214.1 Protein Homology CDS 3394184 3395239 . - 0 ID=cds-WP_014229031.1;Parent=gene-PHA56_RS16220;Dbxref=Genbank:WP_014229031.1;Name=WP_014229031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229031.1;locus_tag=PHA56_RS16220;product=AbrB family transcriptional regulator;protein_id=WP_014229031.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3395356 3396897 . - . ID=gene-PHA56_RS16225;Name=tyrR;gbkey=Gene;gene=tyrR;gene_biotype=protein_coding;locus_tag=PHA56_RS16225;old_locus_tag=PHA56_16225 NZ_CP116214.1 Protein Homology CDS 3395356 3396897 . - 0 ID=cds-WP_004850219.1;Parent=gene-PHA56_RS16225;Dbxref=Genbank:WP_004850219.1;Name=WP_004850219.1;Ontology_term=GO:0006355,GO:0008134;gbkey=CDS;gene=tyrR;go_function=transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226517.1;locus_tag=PHA56_RS16225;product=transcriptional regulator TyrR;protein_id=WP_004850219.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3397183 3398244 . - . ID=gene-PHA56_RS16230;Name=PHA56_RS16230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS16230;old_locus_tag=PHA56_16230 NZ_CP116214.1 Protein Homology CDS 3397183 3398244 . - 0 ID=cds-WP_032692728.1;Parent=gene-PHA56_RS16230;Dbxref=Genbank:WP_032692728.1;Name=WP_032692728.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226514.1;locus_tag=PHA56_RS16230;product=YcjF family protein;protein_id=WP_032692728.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3398241 3399638 . - . ID=gene-PHA56_RS16235;Name=PHA56_RS16235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS16235;old_locus_tag=PHA56_16235 NZ_CP116214.1 Protein Homology CDS 3398241 3399638 . - 0 ID=cds-WP_014229029.1;Parent=gene-PHA56_RS16235;Dbxref=Genbank:WP_014229029.1;Name=WP_014229029.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126510.1;locus_tag=PHA56_RS16235;product=YcjX family protein;protein_id=WP_014229029.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3399727 3400041 . - . ID=gene-PHA56_RS16240;Name=pspE;gbkey=Gene;gene=pspE;gene_biotype=protein_coding;locus_tag=PHA56_RS16240;old_locus_tag=PHA56_16240 NZ_CP116214.1 Protein Homology CDS 3399727 3400041 . - 0 ID=cds-WP_014229028.1;Parent=gene-PHA56_RS16240;Dbxref=Genbank:WP_014229028.1;Name=WP_014229028.1;gbkey=CDS;gene=pspE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229028.1;locus_tag=PHA56_RS16240;product=thiosulfate sulfurtransferase PspE;protein_id=WP_014229028.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3400075 3400305 . - . ID=gene-PHA56_RS16245;Name=pspD;gbkey=Gene;gene=pspD;gene_biotype=protein_coding;locus_tag=PHA56_RS16245;old_locus_tag=PHA56_16245 NZ_CP116214.1 Protein Homology CDS 3400075 3400305 . - 0 ID=cds-WP_014229027.1;Parent=gene-PHA56_RS16245;Dbxref=Genbank:WP_014229027.1;Name=WP_014229027.1;gbkey=CDS;gene=pspD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009653377.1;locus_tag=PHA56_RS16245;product=phage shock protein PspD;protein_id=WP_014229027.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3400325 3400684 . - . ID=gene-PHA56_RS16250;Name=pspC;gbkey=Gene;gene=pspC;gene_biotype=protein_coding;locus_tag=PHA56_RS16250;old_locus_tag=PHA56_16250 NZ_CP116214.1 Protein Homology CDS 3400325 3400684 . - 0 ID=cds-WP_004850207.1;Parent=gene-PHA56_RS16250;Dbxref=Genbank:WP_004850207.1;Name=WP_004850207.1;gbkey=CDS;gene=pspC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226511.1;locus_tag=PHA56_RS16250;product=envelope stress response membrane protein PspC;protein_id=WP_004850207.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3400684 3400908 . - . ID=gene-PHA56_RS16255;Name=pspB;gbkey=Gene;gene=pspB;gene_biotype=protein_coding;locus_tag=PHA56_RS16255;old_locus_tag=PHA56_16255 NZ_CP116214.1 Protein Homology CDS 3400684 3400908 . - 0 ID=cds-WP_004101459.1;Parent=gene-PHA56_RS16255;Dbxref=Genbank:WP_004101459.1;Name=WP_004101459.1;Ontology_term=GO:0009271;gbkey=CDS;gene=pspB;go_process=phage shock|0009271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226510.1;locus_tag=PHA56_RS16255;product=envelope stress response membrane protein PspB;protein_id=WP_004101459.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3400959 3401627 . - . ID=gene-PHA56_RS16260;Name=pspA;gbkey=Gene;gene=pspA;gene_biotype=protein_coding;locus_tag=PHA56_RS16260;old_locus_tag=PHA56_16260 NZ_CP116214.1 Protein Homology CDS 3400959 3401627 . - 0 ID=cds-WP_004121203.1;Parent=gene-PHA56_RS16260;Dbxref=Genbank:WP_004121203.1;Name=WP_004121203.1;gbkey=CDS;gene=pspA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226509.1;locus_tag=PHA56_RS16260;product=phage shock protein PspA;protein_id=WP_004121203.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3401780 3402769 . + . ID=gene-PHA56_RS16265;Name=pspF;gbkey=Gene;gene=pspF;gene_biotype=protein_coding;locus_tag=PHA56_RS16265;old_locus_tag=PHA56_16265 NZ_CP116214.1 Protein Homology CDS 3401780 3402769 . + 0 ID=cds-WP_014838225.1;Parent=gene-PHA56_RS16265;Dbxref=Genbank:WP_014838225.1;Name=WP_014838225.1;gbkey=CDS;gene=pspF;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226508.1;locus_tag=PHA56_RS16265;product=phage shock protein operon transcriptional activator;protein_id=WP_014838225.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3402760 3404151 . - . ID=gene-PHA56_RS16270;Name=PHA56_RS16270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS16270;old_locus_tag=PHA56_16270 NZ_CP116214.1 Protein Homology CDS 3402760 3404151 . - 0 ID=cds-WP_014229025.1;Parent=gene-PHA56_RS16270;Dbxref=Genbank:WP_014229025.1;Name=WP_014229025.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226507.1;locus_tag=PHA56_RS16270;product=MFS transporter;protein_id=WP_014229025.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3404177 3405346 . - . ID=gene-PHA56_RS16275;Name=PHA56_RS16275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS16275;old_locus_tag=PHA56_16275 NZ_CP116214.1 Protein Homology CDS 3404177 3405346 . - 0 ID=cds-WP_014229024.1;Parent=gene-PHA56_RS16275;Dbxref=Genbank:WP_014229024.1;Name=WP_014229024.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226506.1;locus_tag=PHA56_RS16275;product=M20 family metallopeptidase;protein_id=WP_014229024.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3405516 3407822 . + . ID=gene-PHA56_RS16280;Name=PHA56_RS16280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS16280;old_locus_tag=PHA56_16280 NZ_CP116214.1 Protein Homology CDS 3405516 3407822 . + 0 ID=cds-WP_014229023.1;Parent=gene-PHA56_RS16280;Dbxref=Genbank:WP_014229023.1;Name=WP_014229023.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009653524.1;locus_tag=PHA56_RS16280;product=helix-turn-helix domain-containing protein;protein_id=WP_014229023.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3407993 3408277 . + . ID=gene-PHA56_RS16285;Name=PHA56_RS16285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS16285;old_locus_tag=PHA56_16285 NZ_CP116214.1 Protein Homology CDS 3407993 3408277 . + 0 ID=cds-WP_004850195.1;Parent=gene-PHA56_RS16285;Dbxref=Genbank:WP_004850195.1;Name=WP_004850195.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004101451.1;locus_tag=PHA56_RS16285;product=hypothetical protein;protein_id=WP_004850195.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3408641 3410284 . + . ID=gene-PHA56_RS16290;Name=sapA;gbkey=Gene;gene=sapA;gene_biotype=protein_coding;locus_tag=PHA56_RS16290;old_locus_tag=PHA56_16290 NZ_CP116214.1 Protein Homology CDS 3408641 3410284 . + 0 ID=cds-WP_004850192.1;Parent=gene-PHA56_RS16290;Dbxref=Genbank:WP_004850192.1;Name=WP_004850192.1;Ontology_term=GO:0055085,GO:0043190;gbkey=CDS;gene=sapA;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707203.1;locus_tag=PHA56_RS16290;product=peptide ABC transporter substrate-binding protein SapA;protein_id=WP_004850192.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3410281 3411246 . + . ID=gene-PHA56_RS16295;Name=sapB;gbkey=Gene;gene=sapB;gene_biotype=protein_coding;locus_tag=PHA56_RS16295;old_locus_tag=PHA56_16295 NZ_CP116214.1 Protein Homology CDS 3410281 3411246 . + 0 ID=cds-WP_014229022.1;Parent=gene-PHA56_RS16295;Dbxref=Genbank:WP_014229022.1;Name=WP_014229022.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=sapB;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126482.1;locus_tag=PHA56_RS16295;product=putrescine ABC transporter permease SapB;protein_id=WP_014229022.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3411233 3412123 . + . ID=gene-PHA56_RS16300;Name=sapC;gbkey=Gene;gene=sapC;gene_biotype=protein_coding;locus_tag=PHA56_RS16300;old_locus_tag=PHA56_16300 NZ_CP116214.1 Protein Homology CDS 3411233 3412123 . + 0 ID=cds-WP_004139490.1;Parent=gene-PHA56_RS16300;Dbxref=Genbank:WP_004139490.1;Name=WP_004139490.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=sapC;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014838220.1;locus_tag=PHA56_RS16300;product=peptide ABC transporter permease SapC;protein_id=WP_004139490.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3412123 3413115 . + . ID=gene-PHA56_RS16305;Name=sapD;gbkey=Gene;gene=sapD;gene_biotype=protein_coding;locus_tag=PHA56_RS16305;old_locus_tag=PHA56_16305 NZ_CP116214.1 Protein Homology CDS 3412123 3413115 . + 0 ID=cds-WP_014229021.1;Parent=gene-PHA56_RS16305;Dbxref=Genbank:WP_014229021.1;Name=WP_014229021.1;gbkey=CDS;gene=sapD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226498.1;locus_tag=PHA56_RS16305;product=peptide ABC transporter ATP-binding protein SapD;protein_id=WP_014229021.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3413117 3413926 . + . ID=gene-PHA56_RS16310;Name=sapF;gbkey=Gene;gene=sapF;gene_biotype=protein_coding;locus_tag=PHA56_RS16310;old_locus_tag=PHA56_16310 NZ_CP116214.1 Protein Homology CDS 3413117 3413926 . + 0 ID=cds-WP_004850180.1;Parent=gene-PHA56_RS16310;Dbxref=Genbank:WP_004850180.1;Name=WP_004850180.1;gbkey=CDS;gene=sapF;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226497.1;locus_tag=PHA56_RS16310;product=peptide ABC transporter ATP-binding protein SapF;protein_id=WP_004850180.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3414164 3414952 . + . ID=gene-PHA56_RS16315;Name=fabI;gbkey=Gene;gene=fabI;gene_biotype=protein_coding;locus_tag=PHA56_RS16315;old_locus_tag=PHA56_16315 NZ_CP116214.1 Protein Homology CDS 3414164 3414952 . + 0 ID=cds-WP_004121225.1;Parent=gene-PHA56_RS16315;Dbxref=Genbank:WP_004121225.1;Name=WP_004121225.1;gbkey=CDS;gene=fabI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126472.1;locus_tag=PHA56_RS16315;product=enoyl-ACP reductase FabI;protein_id=WP_004121225.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3415135 3416292 . + . ID=gene-PHA56_RS16320;Name=PHA56_RS16320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS16320;old_locus_tag=PHA56_16320 NZ_CP116214.1 Protein Homology CDS 3415135 3416292 . + 0 ID=cds-WP_014229020.1;Parent=gene-PHA56_RS16320;Dbxref=Genbank:WP_014229020.1;Name=WP_014229020.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012968440.1;locus_tag=PHA56_RS16320;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_014229020.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3416374 3418308 . + . ID=gene-PHA56_RS16325;Name=PHA56_RS16325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS16325;old_locus_tag=PHA56_16325 NZ_CP116214.1 Protein Homology CDS 3416374 3418308 . + 0 ID=cds-WP_014229019.1;Parent=gene-PHA56_RS16325;Dbxref=Genbank:WP_014229019.1;Name=WP_014229019.1;Ontology_term=GO:0006401,GO:0003723,GO:0008859;gbkey=CDS;go_function=RNA binding|0003723||IEA,exoribonuclease II activity|0008859||IEA;go_process=RNA catabolic process|0006401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460661.1;locus_tag=PHA56_RS16325;product=exoribonuclease II;protein_id=WP_014229019.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3418485 3418667 . + . ID=gene-PHA56_RS16330;Name=PHA56_RS16330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS16330;old_locus_tag=PHA56_16330 NZ_CP116214.1 Protein Homology CDS 3418485 3418667 . + 0 ID=cds-WP_004121231.1;Parent=gene-PHA56_RS16330;Dbxref=Genbank:WP_004121231.1;Name=WP_004121231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004892757.1;locus_tag=PHA56_RS16330;product=hypothetical protein;protein_id=WP_004121231.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3418738 3419487 . + . ID=gene-PHA56_RS16335;Name=PHA56_RS16335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS16335;old_locus_tag=PHA56_16335 NZ_CP116214.1 Protein Homology CDS 3418738 3419487 . + 0 ID=cds-WP_014229018.1;Parent=gene-PHA56_RS16335;Dbxref=Genbank:WP_014229018.1;Name=WP_014229018.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014838218.1;locus_tag=PHA56_RS16335;product=DNA-binding transcriptional regulator YciT;protein_id=WP_014229018.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3419765 3419983 . + . ID=gene-PHA56_RS16340;Name=osmB;gbkey=Gene;gene=osmB;gene_biotype=protein_coding;locus_tag=PHA56_RS16340;old_locus_tag=PHA56_16340 NZ_CP116214.1 Protein Homology CDS 3419765 3419983 . + 0 ID=cds-WP_004139496.1;Parent=gene-PHA56_RS16340;Dbxref=Genbank:WP_004139496.1;Name=WP_004139496.1;gbkey=CDS;gene=osmB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460664.1;locus_tag=PHA56_RS16340;product=osmotically-inducible lipoprotein OsmB;protein_id=WP_004139496.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3420081 3420407 . - . ID=gene-PHA56_RS16345;Name=yciH;gbkey=Gene;gene=yciH;gene_biotype=protein_coding;locus_tag=PHA56_RS16345;old_locus_tag=PHA56_16345 NZ_CP116214.1 Protein Homology CDS 3420081 3420407 . - 0 ID=cds-WP_014229017.1;Parent=gene-PHA56_RS16345;Dbxref=Genbank:WP_014229017.1;Name=WP_014229017.1;gbkey=CDS;gene=yciH;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226486.1;locus_tag=PHA56_RS16345;product=stress response translation initiation inhibitor YciH;protein_id=WP_014229017.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3420407 3421144 . - . ID=gene-PHA56_RS16350;Name=pyrF;gbkey=Gene;gene=pyrF;gene_biotype=protein_coding;locus_tag=PHA56_RS16350;old_locus_tag=PHA56_16350 NZ_CP116214.1 Protein Homology CDS 3420407 3421144 . - 0 ID=cds-WP_014229016.1;Parent=gene-PHA56_RS16350;Dbxref=Genbank:WP_014229016.1;Name=WP_014229016.1;Ontology_term=GO:0006207,GO:0044205,GO:0004590;gbkey=CDS;gene=pyrF;go_function=orotidine-5'-phosphate decarboxylase activity|0004590||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,'de novo' UMP biosynthetic process|0044205||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229016.1;locus_tag=PHA56_RS16350;product=orotidine-5'-phosphate decarboxylase;protein_id=WP_014229016.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3421337 3422506 . - . ID=gene-PHA56_RS16355;Name=lapB;gbkey=Gene;gene=lapB;gene_biotype=protein_coding;locus_tag=PHA56_RS16355;old_locus_tag=PHA56_16355 NZ_CP116214.1 Protein Homology CDS 3421337 3422506 . - 0 ID=cds-WP_014229015.1;Parent=gene-PHA56_RS16355;Dbxref=Genbank:WP_014229015.1;Name=WP_014229015.1;Ontology_term=GO:0008653,GO:0005515;gbkey=CDS;gene=lapB;go_function=protein binding|0005515||IEA;go_process=lipopolysaccharide metabolic process|0008653||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000891373.1;locus_tag=PHA56_RS16355;product=lipopolysaccharide assembly protein LapB;protein_id=WP_014229015.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3422513 3422821 . - . ID=gene-PHA56_RS16360;Name=PHA56_RS16360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS16360;old_locus_tag=PHA56_16360 NZ_CP116214.1 Protein Homology CDS 3422513 3422821 . - 0 ID=cds-WP_014229014.1;Parent=gene-PHA56_RS16360;Dbxref=Genbank:WP_014229014.1;Name=WP_014229014.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226482.1;locus_tag=PHA56_RS16360;product=LapA family protein;protein_id=WP_014229014.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3422957 3423724 . - . ID=gene-PHA56_RS16365;Name=pgpB;gbkey=Gene;gene=pgpB;gene_biotype=protein_coding;locus_tag=PHA56_RS16365;old_locus_tag=PHA56_16365 NZ_CP116214.1 Protein Homology CDS 3422957 3423724 . - 0 ID=cds-WP_014229013.1;Parent=gene-PHA56_RS16365;Dbxref=Genbank:WP_014229013.1;Name=WP_014229013.1;Ontology_term=GO:0008654,GO:0004609;gbkey=CDS;gene=pgpB;go_function=phosphatidylserine decarboxylase activity|0004609||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004101394.1;locus_tag=PHA56_RS16365;product=phosphatidylglycerophosphatase B;protein_id=WP_014229013.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3423887 3424477 . + . ID=gene-PHA56_RS16370;Name=ribA;gbkey=Gene;gene=ribA;gene_biotype=protein_coding;locus_tag=PHA56_RS16370;old_locus_tag=PHA56_16370 NZ_CP116214.1 Protein Homology CDS 3423887 3424477 . + 0 ID=cds-WP_004121245.1;Parent=gene-PHA56_RS16370;Dbxref=Genbank:WP_004121245.1;Name=WP_004121245.1;Ontology_term=GO:0003935;gbkey=CDS;gene=ribA;go_function=GTP cyclohydrolase II activity|0003935||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012132238.1;locus_tag=PHA56_RS16370;product=GTP cyclohydrolase II;protein_id=WP_004121245.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3424535 3427207 . - . ID=gene-PHA56_RS16375;Name=acnA;gbkey=Gene;gene=acnA;gene_biotype=protein_coding;locus_tag=PHA56_RS16375;old_locus_tag=PHA56_16375 NZ_CP116214.1 Protein Homology CDS 3424535 3427207 . - 0 ID=cds-WP_004850158.1;Parent=gene-PHA56_RS16375;Dbxref=Genbank:WP_004850158.1;Name=WP_004850158.1;Ontology_term=GO:0006099,GO:0003994;gbkey=CDS;gene=acnA;go_function=aconitate hydratase activity|0003994||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226479.1;locus_tag=PHA56_RS16375;product=aconitate hydratase AcnA;protein_id=WP_004850158.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3427603 3427770 . - . ID=gene-PHA56_RS16380;Name=PHA56_RS16380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS16380;old_locus_tag=PHA56_16380 NZ_CP116214.1 Protein Homology CDS 3427603 3427770 . - 0 ID=cds-WP_004121247.1;Parent=gene-PHA56_RS16380;Dbxref=Genbank:WP_004121247.1;Name=WP_004121247.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002901776.1;locus_tag=PHA56_RS16380;product=YmiA family putative membrane protein;protein_id=WP_004121247.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3428016 3428990 . - . ID=gene-PHA56_RS16385;Name=cysB;gbkey=Gene;gene=cysB;gene_biotype=protein_coding;locus_tag=PHA56_RS16385;old_locus_tag=PHA56_16385 NZ_CP116214.1 Protein Homology CDS 3428016 3428990 . - 0 ID=cds-WP_004121248.1;Parent=gene-PHA56_RS16385;Dbxref=Genbank:WP_004121248.1;Name=WP_004121248.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=cysB;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012017585.1;locus_tag=PHA56_RS16385;product=HTH-type transcriptional regulator CysB;protein_id=WP_004121248.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3429322 3431919 . - . ID=gene-PHA56_RS16390;Name=topA;gbkey=Gene;gene=topA;gene_biotype=protein_coding;locus_tag=PHA56_RS16390;old_locus_tag=PHA56_16390 NZ_CP116214.1 Protein Homology CDS 3429322 3431919 . - 0 ID=cds-WP_014229012.1;Parent=gene-PHA56_RS16390;Dbxref=Genbank:WP_014229012.1;Name=WP_014229012.1;Ontology_term=GO:0006260,GO:0006265,GO:0003677,GO:0003917,GO:0005737;gbkey=CDS;gene=topA;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type I (single strand cut%2C ATP-independent) activity|0003917||IEA;go_process=DNA replication|0006260||IEA,DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000513601.1;locus_tag=PHA56_RS16390;product=type I DNA topoisomerase;protein_id=WP_014229012.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3432330 3432581 . + . ID=gene-PHA56_RS16395;Name=PHA56_RS16395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS16395;old_locus_tag=PHA56_16395 NZ_CP116214.1 Protein Homology CDS 3432330 3432581 . + 0 ID=cds-WP_004101388.1;Parent=gene-PHA56_RS16395;Dbxref=Genbank:WP_004101388.1;Name=WP_004101388.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226473.1;locus_tag=PHA56_RS16395;product=YciN family protein;protein_id=WP_004101388.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3432637 3433683 . - . ID=gene-PHA56_RS16400;Name=sohB;gbkey=Gene;gene=sohB;gene_biotype=protein_coding;locus_tag=PHA56_RS16400;old_locus_tag=PHA56_16400 NZ_CP116214.1 Protein Homology CDS 3432637 3433683 . - 0 ID=cds-WP_004850151.1;Parent=gene-PHA56_RS16400;Dbxref=Genbank:WP_004850151.1;Name=WP_004850151.1;Ontology_term=GO:0006508,GO:0008233;gbkey=CDS;gene=sohB;go_function=peptidase activity|0008233||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309871.1;locus_tag=PHA56_RS16400;product=protease SohB;protein_id=WP_004850151.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3433938 3434699 . + . ID=gene-PHA56_RS16405;Name=PHA56_RS16405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS16405;old_locus_tag=PHA56_16405 NZ_CP116214.1 Protein Homology CDS 3433938 3434699 . + 0 ID=cds-WP_014229011.1;Parent=gene-PHA56_RS16405;Dbxref=Genbank:WP_014229011.1;Name=WP_014229011.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226470.1;locus_tag=PHA56_RS16405;product=YciK family oxidoreductase;protein_id=WP_014229011.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3434696 3435286 . + . ID=gene-PHA56_RS16410;Name=cobO;gbkey=Gene;gene=cobO;gene_biotype=protein_coding;locus_tag=PHA56_RS16410;old_locus_tag=PHA56_16410 NZ_CP116214.1 Protein Homology CDS 3434696 3435286 . + 0 ID=cds-WP_004850148.1;Parent=gene-PHA56_RS16410;Dbxref=Genbank:WP_004850148.1;Name=WP_004850148.1;Ontology_term=GO:0009236,GO:0008817;gbkey=CDS;gene=cobO;go_function=corrinoid adenosyltransferase activity|0008817||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226469.1;locus_tag=PHA56_RS16410;product=cob(I)yrinic acid a%2Cc-diamide adenosyltransferase;protein_id=WP_004850148.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3435258 3436232 . - . ID=gene-PHA56_RS16415;Name=PHA56_RS16415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS16415;old_locus_tag=PHA56_16415 NZ_CP116214.1 Protein Homology CDS 3435258 3436232 . - 0 ID=cds-WP_014229010.1;Parent=gene-PHA56_RS16415;Dbxref=Genbank:WP_014229010.1;Name=WP_014229010.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016808519.1;locus_tag=PHA56_RS16415;product=AraC family transcriptional regulator;protein_id=WP_014229010.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3436246 3438606 . - . ID=gene-PHA56_RS16420;Name=PHA56_RS16420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS16420;old_locus_tag=PHA56_16420 NZ_CP116214.1 Protein Homology CDS 3436246 3438606 . - 0 ID=cds-WP_119834414.1;Parent=gene-PHA56_RS16420;Dbxref=Genbank:WP_119834414.1;Name=WP_119834414.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009653422.1;locus_tag=PHA56_RS16420;product=glycoside hydrolase family 3 C-terminal domain-containing protein;protein_id=WP_119834414.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3438625 3439989 . - . ID=gene-PHA56_RS16425;Name=PHA56_RS16425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS16425;old_locus_tag=PHA56_16425 NZ_CP116214.1 Protein Homology CDS 3438625 3439989 . - 0 ID=cds-WP_119834415.1;Parent=gene-PHA56_RS16425;Dbxref=Genbank:WP_119834415.1;Name=WP_119834415.1;Ontology_term=GO:0006812,GO:0008643,GO:0015486,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=glycoside-pentoside-hexuronide:cation symporter activity|0015486||IEA;go_process=monoatomic cation transport|0006812||IEA,carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004101378.1;locus_tag=PHA56_RS16425;product=glycoside-pentoside-hexuronide (GPH):cation symporter;protein_id=WP_119834415.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3440155 3441042 . - . ID=gene-PHA56_RS16430;Name=rluB;gbkey=Gene;gene=rluB;gene_biotype=protein_coding;locus_tag=PHA56_RS16430;old_locus_tag=PHA56_16430 NZ_CP116214.1 Protein Homology CDS 3440155 3441042 . - 0 ID=cds-WP_004121268.1;Parent=gene-PHA56_RS16430;Dbxref=Genbank:WP_004121268.1;Name=WP_004121268.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=rluB;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226468.1;locus_tag=PHA56_RS16430;product=23S rRNA pseudouridine(2605) synthase RluB;protein_id=WP_004121268.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3441453 3442073 . - . ID=gene-PHA56_RS16435;Name=PHA56_RS16435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS16435;old_locus_tag=PHA56_16435 NZ_CP116214.1 Protein Homology CDS 3441453 3442073 . - 0 ID=cds-WP_004850139.1;Parent=gene-PHA56_RS16435;Dbxref=Genbank:WP_004850139.1;Name=WP_004850139.1;Ontology_term=GO:0006400,GO:0061710;gbkey=CDS;go_function=L-threonylcarbamoyladenylate synthase|0061710||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126434.1;locus_tag=PHA56_RS16435;product=L-threonylcarbamoyladenylate synthase;protein_id=WP_004850139.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3442083 3442952 . - . ID=gene-PHA56_RS16440;Name=rnm;gbkey=Gene;gene=rnm;gene_biotype=protein_coding;gene_synonym=trpH,yciV;locus_tag=PHA56_RS16440;old_locus_tag=PHA56_16440 NZ_CP116214.1 Protein Homology CDS 3442083 3442952 . - 0 ID=cds-WP_014229007.1;Parent=gene-PHA56_RS16440;Dbxref=Genbank:WP_014229007.1;Name=WP_014229007.1;gbkey=CDS;gene=rnm;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004101371.1;locus_tag=PHA56_RS16440;product=RNase AM;protein_id=WP_014229007.1;transl_table=11 NZ_CP116214.1 cmsearch sequence_feature 3443180 3443275 . + . ID=id-NZ_CP116214.1:3443180..3443275;Dbxref=RFAM:RF00513;Note=Trp leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.1 NZ_CP116214.1 RefSeq gene 3443311 3444873 . + . ID=gene-PHA56_RS16445;Name=PHA56_RS16445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS16445;old_locus_tag=PHA56_16445 NZ_CP116214.1 Protein Homology CDS 3443311 3444873 . + 0 ID=cds-WP_014229006.1;Parent=gene-PHA56_RS16445;Dbxref=Genbank:WP_014229006.1;Name=WP_014229006.1;Ontology_term=GO:0009058,GO:0004049;gbkey=CDS;go_function=anthranilate synthase activity|0004049||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226463.1;locus_tag=PHA56_RS16445;product=anthranilate synthase component 1;protein_id=WP_014229006.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3444873 3446468 . + . ID=gene-PHA56_RS16450;Name=trpD;gbkey=Gene;gene=trpD;gene_biotype=protein_coding;locus_tag=PHA56_RS16450;old_locus_tag=PHA56_16450 NZ_CP116214.1 Protein Homology CDS 3444873 3446468 . + 0 ID=cds-WP_004850135.1;Parent=gene-PHA56_RS16450;Dbxref=Genbank:WP_004850135.1;Name=WP_004850135.1;Ontology_term=GO:0000162,GO:0004048;gbkey=CDS;gene=trpD;go_function=anthranilate phosphoribosyltransferase activity|0004048||IEA;go_process=tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008784940.1;locus_tag=PHA56_RS16450;product=bifunctional anthranilate synthase glutamate amidotransferase component TrpG/anthranilate phosphoribosyltransferase TrpD;protein_id=WP_004850135.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3446472 3447830 . + . ID=gene-PHA56_RS16455;Name=trpCF;gbkey=Gene;gene=trpCF;gene_biotype=protein_coding;locus_tag=PHA56_RS16455;old_locus_tag=PHA56_16455 NZ_CP116214.1 Protein Homology CDS 3446472 3447830 . + 0 ID=cds-WP_014229005.1;Parent=gene-PHA56_RS16455;Dbxref=Genbank:WP_014229005.1;Name=WP_014229005.1;Ontology_term=GO:0006568,GO:0004425,GO:0004640;gbkey=CDS;gene=trpCF;go_function=indole-3-glycerol-phosphate synthase activity|0004425||IEA,phosphoribosylanthranilate isomerase activity|0004640||IEA;go_process=tryptophan metabolic process|0006568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226461.1;locus_tag=PHA56_RS16455;product=bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF;protein_id=WP_014229005.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3447840 3449033 . + . ID=gene-PHA56_RS16460;Name=trpB;gbkey=Gene;gene=trpB;gene_biotype=protein_coding;locus_tag=PHA56_RS16460;old_locus_tag=PHA56_16460 NZ_CP116214.1 Protein Homology CDS 3447840 3449033 . + 0 ID=cds-WP_014229004.1;Parent=gene-PHA56_RS16460;Dbxref=Genbank:WP_014229004.1;Name=WP_014229004.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpB;go_function=tryptophan synthase activity|0004834||IEA;go_process=tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226460.1;locus_tag=PHA56_RS16460;product=tryptophan synthase subunit beta;protein_id=WP_014229004.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3449033 3449842 . + . ID=gene-PHA56_RS16465;Name=trpA;gbkey=Gene;gene=trpA;gene_biotype=protein_coding;locus_tag=PHA56_RS16465;old_locus_tag=PHA56_16465 NZ_CP116214.1 Protein Homology CDS 3449033 3449842 . + 0 ID=cds-WP_014229003.1;Parent=gene-PHA56_RS16465;Dbxref=Genbank:WP_014229003.1;Name=WP_014229003.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpA;go_function=tryptophan synthase activity|0004834||IEA;go_process=tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226459.1;locus_tag=PHA56_RS16465;product=tryptophan synthase subunit alpha;protein_id=WP_014229003.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3449874 3450329 . - . ID=gene-PHA56_RS16470;Name=PHA56_RS16470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS16470;old_locus_tag=PHA56_16470 NZ_CP116214.1 Protein Homology CDS 3449874 3450329 . - 0 ID=cds-WP_014838208.1;Parent=gene-PHA56_RS16470;Dbxref=Genbank:WP_014838208.1;Name=WP_014838208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015705747.1;locus_tag=PHA56_RS16470;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_014838208.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3450407 3451354 . + . ID=gene-PHA56_RS16475;Name=PHA56_RS16475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS16475;old_locus_tag=PHA56_16475 NZ_CP116214.1 Protein Homology CDS 3450407 3451354 . + 0 ID=cds-WP_038424350.1;Parent=gene-PHA56_RS16475;Dbxref=Genbank:WP_038424350.1;Name=WP_038424350.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015366204.1;locus_tag=PHA56_RS16475;product=zinc-binding alcohol dehydrogenase family protein;protein_id=WP_038424350.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3451509 3452408 . - . ID=gene-PHA56_RS16480;Name=PHA56_RS16480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS16480;old_locus_tag=PHA56_16480 NZ_CP116214.1 Protein Homology CDS 3451509 3452408 . - 0 ID=cds-WP_038424349.1;Parent=gene-PHA56_RS16480;Dbxref=Genbank:WP_038424349.1;Name=WP_038424349.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014838206.1;locus_tag=PHA56_RS16480;product=LysR family transcriptional regulator;protein_id=WP_038424349.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3452530 3453234 . + . ID=gene-PHA56_RS16485;Name=PHA56_RS16485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS16485;old_locus_tag=PHA56_16485 NZ_CP116214.1 Protein Homology CDS 3452530 3453234 . + 0 ID=cds-WP_014228999.1;Parent=gene-PHA56_RS16485;Dbxref=Genbank:WP_014228999.1;Name=WP_014228999.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004850123.1;locus_tag=PHA56_RS16485;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_014228999.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3453315 3454208 . - . ID=gene-PHA56_RS16490;Name=PHA56_RS16490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS16490;old_locus_tag=PHA56_16490 NZ_CP116214.1 Protein Homology CDS 3453315 3454208 . - 0 ID=cds-WP_014838204.1;Parent=gene-PHA56_RS16490;Dbxref=Genbank:WP_014838204.1;Name=WP_014838204.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004112407.1;locus_tag=PHA56_RS16490;product=helix-turn-helix domain-containing protein;protein_id=WP_014838204.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3454519 3455142 . + . ID=gene-PHA56_RS16495;Name=PHA56_RS16495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS16495;old_locus_tag=PHA56_16495 NZ_CP116214.1 Protein Homology CDS 3454519 3455142 . + 0 ID=cds-WP_038424348.1;Parent=gene-PHA56_RS16495;Dbxref=Genbank:WP_038424348.1;Name=WP_038424348.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014228997.1;locus_tag=PHA56_RS16495;product=helix-turn-helix transcriptional regulator;protein_id=WP_038424348.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3455667 3455912 . + . ID=gene-PHA56_RS16500;Name=PHA56_RS16500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS16500;old_locus_tag=PHA56_16500 NZ_CP116214.1 Protein Homology CDS 3455667 3455912 . + 0 ID=cds-WP_014228996.1;Parent=gene-PHA56_RS16500;Dbxref=Genbank:WP_014228996.1;Name=WP_014228996.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014228996.1;locus_tag=PHA56_RS16500;product=YmjA family protein;protein_id=WP_014228996.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3456034 3456672 . - . ID=gene-PHA56_RS16505;Name=ompW;gbkey=Gene;gene=ompW;gene_biotype=protein_coding;locus_tag=PHA56_RS16505;old_locus_tag=PHA56_16505 NZ_CP116214.1 Protein Homology CDS 3456034 3456672 . - 0 ID=cds-WP_004121296.1;Parent=gene-PHA56_RS16505;Dbxref=Genbank:WP_004121296.1;Name=WP_004121296.1;Ontology_term=GO:0019867;gbkey=CDS;gene=ompW;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415772.1;locus_tag=PHA56_RS16505;product=outer membrane protein OmpW;protein_id=WP_004121296.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3456986 3457729 . + . ID=gene-PHA56_RS16510;Name=PHA56_RS16510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS16510;old_locus_tag=PHA56_16510 NZ_CP116214.1 Protein Homology CDS 3456986 3457729 . + 0 ID=cds-WP_038424346.1;Parent=gene-PHA56_RS16510;Dbxref=Genbank:WP_038424346.1;Name=WP_038424346.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226446.1;locus_tag=PHA56_RS16510;product=YciC family protein;protein_id=WP_038424346.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3457782 3458321 . + . ID=gene-PHA56_RS16515;Name=PHA56_RS16515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS16515;old_locus_tag=PHA56_16515 NZ_CP116214.1 Protein Homology CDS 3457782 3458321 . + 0 ID=cds-WP_004101360.1;Parent=gene-PHA56_RS16515;Dbxref=Genbank:WP_004101360.1;Name=WP_004101360.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226445.1;locus_tag=PHA56_RS16515;product=septation protein A;protein_id=WP_004101360.1;transl_table=11 NZ_CP116214.1 cmsearch riboswitch 3458421 3458482 . + . ID=id-NZ_CP116214.1:3458421..3458482;Dbxref=RFAM:RF01734;Note=Fluoride riboswitches increase expression of downstream genes that help mitigate the toxic effects of very high levels of fluoride%3B They are found in a wide variety of bacteria and archaea;bound_moiety=fluoride;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NZ_CP116214.1 RefSeq gene 3458562 3459878 . + . ID=gene-PHA56_RS16520;Name=PHA56_RS16520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS16520;old_locus_tag=PHA56_16520 NZ_CP116214.1 Protein Homology CDS 3458562 3459878 . + 0 ID=cds-WP_038424344.1;Parent=gene-PHA56_RS16520;Dbxref=Genbank:WP_038424344.1;Name=WP_038424344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014838202.1;locus_tag=PHA56_RS16520;product=voltage-gated chloride channel family protein;protein_id=WP_038424344.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3460061 3462241 . + . ID=gene-PHA56_RS16525;Name=PHA56_RS16525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS16525;old_locus_tag=PHA56_16525 NZ_CP116214.1 Protein Homology CDS 3460061 3462241 . + 0 ID=cds-WP_038424342.1;Parent=gene-PHA56_RS16525;Dbxref=Genbank:WP_038424342.1;Name=WP_038424342.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015958223.1;locus_tag=PHA56_RS16525;product=TonB-dependent siderophore receptor;protein_id=WP_038424342.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3462340 3462738 . + . ID=gene-PHA56_RS16530;Name=yciA;gbkey=Gene;gene=yciA;gene_biotype=protein_coding;locus_tag=PHA56_RS16530;old_locus_tag=PHA56_16530 NZ_CP116214.1 Protein Homology CDS 3462340 3462738 . + 0 ID=cds-WP_004850109.1;Parent=gene-PHA56_RS16530;Dbxref=Genbank:WP_004850109.1;Name=WP_004850109.1;Ontology_term=GO:0016790;gbkey=CDS;gene=yciA;go_function=thiolester hydrolase activity|0016790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017898669.1;locus_tag=PHA56_RS16530;product=acyl-CoA thioester hydrolase YciA;protein_id=WP_004850109.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3462771 3463307 . - . ID=gene-PHA56_RS16535;Name=PHA56_RS16535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS16535;old_locus_tag=PHA56_16535 NZ_CP116214.1 Protein Homology CDS 3462771 3463307 . - 0 ID=cds-WP_009653426.1;Parent=gene-PHA56_RS16535;Dbxref=Genbank:WP_009653426.1;Name=WP_009653426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226442.1;locus_tag=PHA56_RS16535;product=YniB family protein;protein_id=WP_009653426.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3463437 3464105 . + . ID=gene-PHA56_RS16540;Name=hxpB;gbkey=Gene;gene=hxpB;gene_biotype=protein_coding;locus_tag=PHA56_RS16540;old_locus_tag=PHA56_16540 NZ_CP116214.1 Protein Homology CDS 3463437 3464105 . + 0 ID=cds-WP_038424340.1;Parent=gene-PHA56_RS16540;Dbxref=Genbank:WP_038424340.1;Name=WP_038424340.1;gbkey=CDS;gene=hxpB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226441.1;locus_tag=PHA56_RS16540;product=hexitol phosphatase HxpB;protein_id=WP_038424340.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3464254 3465015 . + . ID=gene-PHA56_RS16545;Name=kduD;gbkey=Gene;gene=kduD;gene_biotype=protein_coding;locus_tag=PHA56_RS16545;old_locus_tag=PHA56_16545 NZ_CP116214.1 Protein Homology CDS 3464254 3465015 . + 0 ID=cds-WP_014228989.1;Parent=gene-PHA56_RS16545;Dbxref=Genbank:WP_014228989.1;Name=WP_014228989.1;Ontology_term=GO:0000272,GO:0008678,GO:0016491,GO:0051287;gbkey=CDS;gene=kduD;go_function=2-deoxy-D-gluconate 3-dehydrogenase activity|0008678||IEA,oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA;go_process=polysaccharide catabolic process|0000272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226440.1;locus_tag=PHA56_RS16545;product=2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD;protein_id=WP_014228989.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3465107 3465697 . + . ID=gene-PHA56_RS16550;Name=PHA56_RS16550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS16550;old_locus_tag=PHA56_16550 NZ_CP116214.1 Protein Homology CDS 3465107 3465697 . + 0 ID=cds-WP_014228988.1;Parent=gene-PHA56_RS16550;Dbxref=Genbank:WP_014228988.1;Name=WP_014228988.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226439.1;locus_tag=PHA56_RS16550;product=metal-dependent hydrolase;protein_id=WP_014228988.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3465832 3467223 . + . ID=gene-PHA56_RS16555;Name=PHA56_RS16555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS16555;old_locus_tag=PHA56_16555 NZ_CP116214.1 Protein Homology CDS 3465832 3467223 . + 0 ID=cds-WP_014228987.1;Parent=gene-PHA56_RS16555;Dbxref=Genbank:WP_014228987.1;Name=WP_014228987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120792.1;locus_tag=PHA56_RS16555;product=L-cystine transporter;protein_id=WP_014228987.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3467299 3467538 . - . ID=gene-PHA56_RS16560;Name=cedA;gbkey=Gene;gene=cedA;gene_biotype=protein_coding;locus_tag=PHA56_RS16560;old_locus_tag=PHA56_16560 NZ_CP116214.1 Protein Homology CDS 3467299 3467538 . - 0 ID=cds-WP_009653410.1;Parent=gene-PHA56_RS16560;Dbxref=Genbank:WP_009653410.1;Name=WP_009653410.1;gbkey=CDS;gene=cedA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004151919.1;locus_tag=PHA56_RS16560;product=cell division activator CedA;protein_id=WP_009653410.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3467735 3469993 . + . ID=gene-PHA56_RS16565;Name=katE;gbkey=Gene;gene=katE;gene_biotype=protein_coding;locus_tag=PHA56_RS16565;old_locus_tag=PHA56_16565 NZ_CP116214.1 Protein Homology CDS 3467735 3469993 . + 0 ID=cds-WP_049070237.1;Parent=gene-PHA56_RS16565;Dbxref=Genbank:WP_049070237.1;Name=WP_049070237.1;Ontology_term=GO:0006979,GO:0004096,GO:0020037;gbkey=CDS;gene=katE;go_function=catalase activity|0004096||IEA,heme binding|0020037||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226436.1;locus_tag=PHA56_RS16565;product=catalase HPII;protein_id=WP_049070237.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3470036 3470794 . - . ID=gene-PHA56_RS16570;Name=chbG;gbkey=Gene;gene=chbG;gene_biotype=protein_coding;locus_tag=PHA56_RS16570;old_locus_tag=PHA56_16570 NZ_CP116214.1 Protein Homology CDS 3470036 3470794 . - 0 ID=cds-WP_014228984.1;Parent=gene-PHA56_RS16570;Dbxref=Genbank:WP_014228984.1;Name=WP_014228984.1;Ontology_term=GO:0000272,GO:0016811;gbkey=CDS;gene=chbG;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in linear amides|0016811||IEA;go_process=polysaccharide catabolic process|0000272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226435.1;locus_tag=PHA56_RS16570;product=chitin disaccharide deacetylase;protein_id=WP_014228984.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3470807 3472153 . - . ID=gene-PHA56_RS16575;Name=PHA56_RS16575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS16575;old_locus_tag=PHA56_16575 NZ_CP116214.1 Protein Homology CDS 3470807 3472153 . - 0 ID=cds-WP_009653470.1;Parent=gene-PHA56_RS16575;Dbxref=Genbank:WP_009653470.1;Name=WP_009653470.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020078560.1;locus_tag=PHA56_RS16575;product=6-phospho-beta-glucosidase;protein_id=WP_009653470.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3472256 3473080 . - . ID=gene-PHA56_RS16580;Name=chbR;gbkey=Gene;gene=chbR;gene_biotype=protein_coding;locus_tag=PHA56_RS16580;old_locus_tag=PHA56_16580 NZ_CP116214.1 Protein Homology CDS 3472256 3473080 . - 0 ID=cds-WP_004121335.1;Parent=gene-PHA56_RS16580;Dbxref=Genbank:WP_004121335.1;Name=WP_004121335.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=chbR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226433.1;locus_tag=PHA56_RS16580;product=transcriptional regulator ChbR;protein_id=WP_004121335.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3473108 3473455 . - . ID=gene-PHA56_RS16585;Name=chbA;gbkey=Gene;gene=chbA;gene_biotype=protein_coding;locus_tag=PHA56_RS16585;old_locus_tag=PHA56_16585 NZ_CP116214.1 Protein Homology CDS 3473108 3473455 . - 0 ID=cds-WP_038424337.1;Parent=gene-PHA56_RS16585;Dbxref=Genbank:WP_038424337.1;Name=WP_038424337.1;gbkey=CDS;gene=chbA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226432.1;locus_tag=PHA56_RS16585;product=PTS N%2CN'-diacetylchitobiose transporter subunit IIA;protein_id=WP_038424337.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3473509 3474867 . - . ID=gene-PHA56_RS16590;Name=chbC;gbkey=Gene;gene=chbC;gene_biotype=protein_coding;locus_tag=PHA56_RS16590;old_locus_tag=PHA56_16590 NZ_CP116214.1 Protein Homology CDS 3473509 3474867 . - 0 ID=cds-WP_004850089.1;Parent=gene-PHA56_RS16590;Dbxref=Genbank:WP_004850089.1;Name=WP_004850089.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;gene=chbC;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460279.1;locus_tag=PHA56_RS16590;product=PTS N%2CN'-diacetylchitobiose transporter subunit IIC;protein_id=WP_004850089.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3475035 3475355 . - . ID=gene-PHA56_RS16595;Name=chbB;gbkey=Gene;gene=chbB;gene_biotype=protein_coding;locus_tag=PHA56_RS16595;old_locus_tag=PHA56_16595 NZ_CP116214.1 Protein Homology CDS 3475035 3475355 . - 0 ID=cds-WP_004101340.1;Parent=gene-PHA56_RS16595;Dbxref=Genbank:WP_004101340.1;Name=WP_004101340.1;gbkey=CDS;gene=chbB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226428.1;locus_tag=PHA56_RS16595;product=PTS N%2CN'-diacetylchitobiose transporter subunit IIB;protein_id=WP_004101340.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3475640 3475978 . - . ID=gene-PHA56_RS16600;Name=osmE;gbkey=Gene;gene=osmE;gene_biotype=protein_coding;locus_tag=PHA56_RS16600;old_locus_tag=PHA56_16600 NZ_CP116214.1 Protein Homology CDS 3475640 3475978 . - 0 ID=cds-WP_271292922.1;Parent=gene-PHA56_RS16600;Dbxref=Genbank:WP_271292922.1;Name=WP_271292922.1;Ontology_term=GO:0019867;gbkey=CDS;gene=osmE;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310472.1;locus_tag=PHA56_RS16600;product=osmotically-inducible lipoprotein OsmE;protein_id=WP_271292922.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3476209 3477036 . + . ID=gene-PHA56_RS16605;Name=nadE;gbkey=Gene;gene=nadE;gene_biotype=protein_coding;locus_tag=PHA56_RS16605;old_locus_tag=PHA56_16605 NZ_CP116214.1 Protein Homology CDS 3476209 3477036 . + 0 ID=cds-WP_004850083.1;Parent=gene-PHA56_RS16605;Dbxref=Genbank:WP_004850083.1;Name=WP_004850083.1;Ontology_term=GO:0009435,GO:0003952,GO:0004359,GO:0008795;gbkey=CDS;gene=nadE;go_function=NAD+ synthase (glutamine-hydrolyzing) activity|0003952||IEA,glutaminase activity|0004359||IEA,NAD+ synthase activity|0008795||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226426.1;locus_tag=PHA56_RS16605;product=ammonia-dependent NAD(+) synthetase;protein_id=WP_004850083.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3477143 3478003 . + . ID=gene-PHA56_RS16610;Name=cho;gbkey=Gene;gene=cho;gene_biotype=protein_coding;locus_tag=PHA56_RS16610;old_locus_tag=PHA56_16610 NZ_CP116214.1 Protein Homology CDS 3477143 3478003 . + 0 ID=cds-WP_004850082.1;Parent=gene-PHA56_RS16610;Dbxref=Genbank:WP_004850082.1;Name=WP_004850082.1;gbkey=CDS;gene=cho;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004101337.1;locus_tag=PHA56_RS16610;product=excinuclease Cho;protein_id=WP_004850082.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3478038 3480080 . - . ID=gene-PHA56_RS16615;Name=PHA56_RS16615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS16615;old_locus_tag=PHA56_16615 NZ_CP116214.1 Protein Homology CDS 3478038 3480080 . - 0 ID=cds-WP_032692744.1;Parent=gene-PHA56_RS16615;Dbxref=Genbank:WP_032692744.1;Name=WP_032692744.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004121352.1;locus_tag=PHA56_RS16615;product=DUF2207 domain-containing protein;protein_id=WP_032692744.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3480085 3480627 . - . ID=gene-PHA56_RS16620;Name=PHA56_RS16620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS16620;old_locus_tag=PHA56_16620 NZ_CP116214.1 Protein Homology CDS 3480085 3480627 . - 0 ID=cds-WP_014228982.1;Parent=gene-PHA56_RS16620;Dbxref=Genbank:WP_014228982.1;Name=WP_014228982.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014228982.1;locus_tag=PHA56_RS16620;product=LemA family protein;protein_id=WP_014228982.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3480819 3481301 . - . ID=gene-PHA56_RS16625;Name=spy;gbkey=Gene;gene=spy;gene_biotype=protein_coding;locus_tag=PHA56_RS16625;old_locus_tag=PHA56_16625 NZ_CP116214.1 Protein Homology CDS 3480819 3481301 . - 0 ID=cds-WP_014228981.1;Parent=gene-PHA56_RS16625;Dbxref=Genbank:WP_014228981.1;Name=WP_014228981.1;Ontology_term=GO:0042597;gbkey=CDS;gene=spy;go_component=periplasmic space|0042597||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004179415.1;locus_tag=PHA56_RS16625;product=ATP-independent periplasmic protein-refolding chaperone Spy;protein_id=WP_014228981.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3481651 3482616 . - . ID=gene-PHA56_RS16630;Name=astE;gbkey=Gene;gene=astE;gene_biotype=protein_coding;locus_tag=PHA56_RS16630;old_locus_tag=PHA56_16630 NZ_CP116214.1 Protein Homology CDS 3481651 3482616 . - 0 ID=cds-WP_014838199.1;Parent=gene-PHA56_RS16630;Dbxref=Genbank:WP_014838199.1;Name=WP_014838199.1;Ontology_term=GO:0006527,GO:0009017;gbkey=CDS;gene=astE;go_function=succinylglutamate desuccinylase activity|0009017||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004850079.1;locus_tag=PHA56_RS16630;product=succinylglutamate desuccinylase;protein_id=WP_014838199.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3482626 3483951 . - . ID=gene-PHA56_RS16635;Name=astB;gbkey=Gene;gene=astB;gene_biotype=protein_coding;locus_tag=PHA56_RS16635;old_locus_tag=PHA56_16635 NZ_CP116214.1 Protein Homology CDS 3482626 3483951 . - 0 ID=cds-WP_271292923.1;Parent=gene-PHA56_RS16635;Dbxref=Genbank:WP_271292923.1;Name=WP_271292923.1;Ontology_term=GO:0006527,GO:0009015;gbkey=CDS;gene=astB;go_function=N-succinylarginine dihydrolase activity|0009015||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226421.1;locus_tag=PHA56_RS16635;product=N-succinylarginine dihydrolase;protein_id=WP_271292923.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3483948 3485426 . - . ID=gene-PHA56_RS16640;Name=astD;gbkey=Gene;gene=astD;gene_biotype=protein_coding;locus_tag=PHA56_RS16640;old_locus_tag=PHA56_16640 NZ_CP116214.1 Protein Homology CDS 3483948 3485426 . - 0 ID=cds-WP_038424336.1;Parent=gene-PHA56_RS16640;Dbxref=Genbank:WP_038424336.1;Name=WP_038424336.1;Ontology_term=GO:0006527,GO:0016620;gbkey=CDS;gene=astD;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009653534.1;locus_tag=PHA56_RS16640;product=succinylglutamate-semialdehyde dehydrogenase;protein_id=WP_038424336.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3485423 3486457 . - . ID=gene-PHA56_RS16645;Name=astA;gbkey=Gene;gene=astA;gene_biotype=protein_coding;locus_tag=PHA56_RS16645;old_locus_tag=PHA56_16645 NZ_CP116214.1 Protein Homology CDS 3485423 3486457 . - 0 ID=cds-WP_076752549.1;Parent=gene-PHA56_RS16645;Dbxref=Genbank:WP_076752549.1;Name=WP_076752549.1;Ontology_term=GO:0006527,GO:0008791;gbkey=CDS;gene=astA;go_function=arginine N-succinyltransferase activity|0008791||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226419.1;locus_tag=PHA56_RS16645;product=arginine N-succinyltransferase;protein_id=WP_076752549.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3486454 3487674 . - . ID=gene-PHA56_RS16650;Name=PHA56_RS16650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS16650;old_locus_tag=PHA56_16650 NZ_CP116214.1 Protein Homology CDS 3486454 3487674 . - 0 ID=cds-WP_032692746.1;Parent=gene-PHA56_RS16650;Dbxref=Genbank:WP_032692746.1;Name=WP_032692746.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226418.1;locus_tag=PHA56_RS16650;product=aspartate aminotransferase family protein;protein_id=WP_032692746.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3488119 3488925 . + . ID=gene-PHA56_RS16655;Name=xthA;gbkey=Gene;gene=xthA;gene_biotype=protein_coding;locus_tag=PHA56_RS16655;old_locus_tag=PHA56_16655 NZ_CP116214.1 Protein Homology CDS 3488119 3488925 . + 0 ID=cds-WP_014228976.1;Parent=gene-PHA56_RS16655;Dbxref=Genbank:WP_014228976.1;Name=WP_014228976.1;Ontology_term=GO:0006281,GO:0003677,GO:0004519,GO:0008853;gbkey=CDS;gene=xthA;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA,exodeoxyribonuclease III activity|0008853||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003030642.1;locus_tag=PHA56_RS16655;product=exodeoxyribonuclease III;protein_id=WP_014228976.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3489109 3489771 . + . ID=gene-PHA56_RS16660;Name=PHA56_RS16660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS16660;old_locus_tag=PHA56_16660 NZ_CP116214.1 Protein Homology CDS 3489109 3489771 . + 0 ID=cds-WP_014838195.1;Parent=gene-PHA56_RS16660;Dbxref=Genbank:WP_014838195.1;Name=WP_014838195.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016808494.1;locus_tag=PHA56_RS16660;product=TVP38/TMEM64 family protein;protein_id=WP_014838195.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3489761 3490459 . + . ID=gene-PHA56_RS16665;Name=PHA56_RS16665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS16665;old_locus_tag=PHA56_16665 NZ_CP116214.1 Protein Homology CDS 3489761 3490459 . + 0 ID=cds-WP_025106963.1;Parent=gene-PHA56_RS16665;Dbxref=Genbank:WP_025106963.1;Name=WP_025106963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016808493.1;locus_tag=PHA56_RS16665;product=TVP38/TMEM64 family protein;protein_id=WP_025106963.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3490456 3491007 . + . ID=gene-PHA56_RS16670;Name=PHA56_RS16670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS16670;old_locus_tag=PHA56_16670 NZ_CP116214.1 Protein Homology CDS 3490456 3491007 . + 0 ID=cds-WP_014228973.1;Parent=gene-PHA56_RS16670;Dbxref=Genbank:WP_014228973.1;Name=WP_014228973.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004101314.1;locus_tag=PHA56_RS16670;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_014228973.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3491017 3492177 . + . ID=gene-PHA56_RS16675;Name=PHA56_RS16675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS16675;old_locus_tag=PHA56_16675 NZ_CP116214.1 Protein Homology CDS 3491017 3492177 . + 0 ID=cds-WP_014838193.1;Parent=gene-PHA56_RS16675;Dbxref=Genbank:WP_014838193.1;Name=WP_014838193.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017146084.1;locus_tag=PHA56_RS16675;product=ABC transporter substrate-binding protein;protein_id=WP_014838193.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3492150 3493685 . + . ID=gene-PHA56_RS16680;Name=PHA56_RS16680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS16680;old_locus_tag=PHA56_16680 NZ_CP116214.1 Protein Homology CDS 3492150 3493685 . + 0 ID=cds-WP_076752548.1;Parent=gene-PHA56_RS16680;Dbxref=Genbank:WP_076752548.1;Name=WP_076752548.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226411.1;locus_tag=PHA56_RS16680;product=ABC transporter permease subunit;protein_id=WP_076752548.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3493685 3494317 . + . ID=gene-PHA56_RS16685;Name=PHA56_RS16685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS16685;old_locus_tag=PHA56_16685 NZ_CP116214.1 Protein Homology CDS 3493685 3494317 . + 0 ID=cds-WP_014838191.1;Parent=gene-PHA56_RS16685;Dbxref=Genbank:WP_014838191.1;Name=WP_014838191.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226410.1;locus_tag=PHA56_RS16685;product=ATP-binding cassette domain-containing protein;protein_id=WP_014838191.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3494396 3495703 . + . ID=gene-PHA56_RS16690;Name=PHA56_RS16690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS16690;old_locus_tag=PHA56_16690 NZ_CP116214.1 Protein Homology CDS 3494396 3495703 . + 0 ID=cds-WP_014228969.1;Parent=gene-PHA56_RS16690;Dbxref=Genbank:WP_014228969.1;Name=WP_014228969.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014228969.1;locus_tag=PHA56_RS16690;product=rhodanese-like domain-containing protein;protein_id=WP_014228969.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3495838 3496455 . - . ID=gene-PHA56_RS16695;Name=PHA56_RS16695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS16695;old_locus_tag=PHA56_16695 NZ_CP116214.1 Protein Homology CDS 3495838 3496455 . - 0 ID=cds-WP_014228968.1;Parent=gene-PHA56_RS16695;Dbxref=Genbank:WP_014228968.1;Name=WP_014228968.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004850051.1;locus_tag=PHA56_RS16695;product=CDP-alcohol phosphatidyltransferase family protein;protein_id=WP_014228968.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3496542 3496952 . + . ID=gene-PHA56_RS16700;Name=PHA56_RS16700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS16700;old_locus_tag=PHA56_16700 NZ_CP116214.1 Protein Homology CDS 3496542 3496952 . + 0 ID=cds-WP_032692774.1;Parent=gene-PHA56_RS16700;Dbxref=Genbank:WP_032692774.1;Name=WP_032692774.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014838189.1;locus_tag=PHA56_RS16700;product=pyrimidine (deoxy)nucleoside triphosphate diphosphatase;protein_id=WP_032692774.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3497135 3498478 . + . ID=gene-PHA56_RS16705;Name=gdhA;gbkey=Gene;gene=gdhA;gene_biotype=protein_coding;locus_tag=PHA56_RS16705;old_locus_tag=PHA56_16705 NZ_CP116214.1 Protein Homology CDS 3497135 3498478 . + 0 ID=cds-WP_014838187.1;Parent=gene-PHA56_RS16705;Dbxref=Genbank:WP_014838187.1;Name=WP_014838187.1;Ontology_term=GO:0006520,GO:0016639;gbkey=CDS;gene=gdhA;go_function=oxidoreductase activity%2C acting on the CH-NH2 group of donors%2C NAD or NADP as acceptor|0016639||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226405.1;locus_tag=PHA56_RS16705;product=NADP-specific glutamate dehydrogenase;protein_id=WP_014838187.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3498551 3500506 . - . ID=gene-PHA56_RS16710;Name=PHA56_RS16710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS16710;old_locus_tag=PHA56_16710 NZ_CP116214.1 Protein Homology CDS 3498551 3500506 . - 0 ID=cds-WP_014228966.1;Parent=gene-PHA56_RS16710;Dbxref=Genbank:WP_014228966.1;Name=WP_014228966.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009653400.1;locus_tag=PHA56_RS16710;product=DNA topoisomerase III;protein_id=WP_014228966.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3500511 3501554 . - . ID=gene-PHA56_RS16715;Name=selD;gbkey=Gene;gene=selD;gene_biotype=protein_coding;locus_tag=PHA56_RS16715;old_locus_tag=PHA56_16715 NZ_CP116214.1 Protein Homology CDS 3500511 3501554 . - 0 ID=cds-WP_014228965.1;Parent=gene-PHA56_RS16715;Dbxref=Genbank:WP_014228965.1;Name=WP_014228965.1;Ontology_term=GO:0016260,GO:0004756;gbkey=CDS;gene=selD;go_function=selenide%2C water dikinase activity|0004756||IEA;go_process=selenocysteine biosynthetic process|0016260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226401.1;locus_tag=PHA56_RS16715;product=selenide%2C water dikinase SelD;protein_id=WP_014228965.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3501782 3502528 . + . ID=gene-PHA56_RS16720;Name=PHA56_RS16720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS16720;old_locus_tag=PHA56_16720 NZ_CP116214.1 Protein Homology CDS 3501782 3502528 . + 0 ID=cds-WP_014838185.1;Parent=gene-PHA56_RS16720;Dbxref=Genbank:WP_014838185.1;Name=WP_014838185.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226400.1;locus_tag=PHA56_RS16720;product=phosphatase PAP2 family protein;protein_id=WP_014838185.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3502760 3503311 . - . ID=gene-PHA56_RS16725;Name=PHA56_RS16725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS16725;old_locus_tag=PHA56_16725 NZ_CP116214.1 Protein Homology CDS 3502760 3503311 . - 0 ID=cds-WP_014228963.1;Parent=gene-PHA56_RS16725;Dbxref=Genbank:WP_014228963.1;Name=WP_014228963.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226397.1;locus_tag=PHA56_RS16725;product=NAD(P)H nitroreductase;protein_id=WP_014228963.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3503478 3505331 . + . ID=gene-PHA56_RS16730;Name=sppA;gbkey=Gene;gene=sppA;gene_biotype=protein_coding;locus_tag=PHA56_RS16730;old_locus_tag=PHA56_16730 NZ_CP116214.1 Protein Homology CDS 3503478 3505331 . + 0 ID=cds-WP_014228962.1;Parent=gene-PHA56_RS16730;Dbxref=Genbank:WP_014228962.1;Name=WP_014228962.1;Ontology_term=GO:0006465,GO:0008233;gbkey=CDS;gene=sppA;go_function=peptidase activity|0008233||IEA;go_process=signal peptide processing|0006465||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226396.1;locus_tag=PHA56_RS16730;product=signal peptide peptidase SppA;protein_id=WP_014228962.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3505426 3506442 . + . ID=gene-PHA56_RS16735;Name=ansA;gbkey=Gene;gene=ansA;gene_biotype=protein_coding;locus_tag=PHA56_RS16735;old_locus_tag=PHA56_16735 NZ_CP116214.1 Protein Homology CDS 3505426 3506442 . + 0 ID=cds-WP_004850037.1;Parent=gene-PHA56_RS16735;Dbxref=Genbank:WP_004850037.1;Name=WP_004850037.1;Ontology_term=GO:0006520,GO:0004067;gbkey=CDS;gene=ansA;go_function=asparaginase activity|0004067||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310501.1;locus_tag=PHA56_RS16735;product=asparaginase;protein_id=WP_004850037.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3506453 3507094 . + . ID=gene-PHA56_RS16740;Name=pncA;gbkey=Gene;gene=pncA;gene_biotype=protein_coding;locus_tag=PHA56_RS16740;old_locus_tag=PHA56_16740 NZ_CP116214.1 Protein Homology CDS 3506453 3507094 . + 0 ID=cds-WP_014228961.1;Parent=gene-PHA56_RS16740;Dbxref=Genbank:WP_014228961.1;Name=WP_014228961.1;gbkey=CDS;gene=pncA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226394.1;locus_tag=PHA56_RS16740;product=bifunctional nicotinamidase/pyrazinamidase;protein_id=WP_014228961.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3507132 3508490 . - . ID=gene-PHA56_RS16745;Name=PHA56_RS16745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS16745;old_locus_tag=PHA56_16745 NZ_CP116214.1 Protein Homology CDS 3507132 3508490 . - 0 ID=cds-WP_076752547.1;Parent=gene-PHA56_RS16745;Dbxref=Genbank:WP_076752547.1;Name=WP_076752547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226393.1;locus_tag=PHA56_RS16745;product=MFS transporter;protein_id=WP_076752547.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3508632 3509390 . - . ID=gene-PHA56_RS16750;Name=PHA56_RS16750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS16750;old_locus_tag=PHA56_16750 NZ_CP116214.1 Protein Homology CDS 3508632 3509390 . - 0 ID=cds-WP_014228959.1;Parent=gene-PHA56_RS16750;Dbxref=Genbank:WP_014228959.1;Name=WP_014228959.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226392.1;locus_tag=PHA56_RS16750;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_014228959.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3509524 3510507 . - . ID=gene-PHA56_RS16755;Name=PHA56_RS16755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS16755;old_locus_tag=PHA56_16755 NZ_CP116214.1 Protein Homology CDS 3509524 3510507 . - 0 ID=cds-WP_032749514.1;Parent=gene-PHA56_RS16755;Dbxref=Genbank:WP_032749514.1;Name=WP_032749514.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226391.1;locus_tag=PHA56_RS16755;product=aldo/keto reductase;protein_id=WP_032749514.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3510517 3511464 . - . ID=gene-PHA56_RS16760;Name=PHA56_RS16760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS16760;old_locus_tag=PHA56_16760 NZ_CP116214.1 Protein Homology CDS 3510517 3511464 . - 0 ID=cds-WP_014838183.1;Parent=gene-PHA56_RS16760;Dbxref=Genbank:WP_014838183.1;Name=WP_014838183.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226390.1;locus_tag=PHA56_RS16760;product=sugar kinase;protein_id=WP_014838183.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3511469 3512305 . - . ID=gene-PHA56_RS16765;Name=PHA56_RS16765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS16765;old_locus_tag=PHA56_16765 NZ_CP116214.1 Protein Homology CDS 3511469 3512305 . - 0 ID=cds-WP_038424331.1;Parent=gene-PHA56_RS16765;Dbxref=Genbank:WP_038424331.1;Name=WP_038424331.1;Ontology_term=GO:0005975,GO:0016832;gbkey=CDS;go_function=aldehyde-lyase activity|0016832||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226389.1;locus_tag=PHA56_RS16765;product=ketose-bisphosphate aldolase;protein_id=WP_038424331.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3512330 3513373 . - . ID=gene-PHA56_RS16770;Name=PHA56_RS16770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS16770;old_locus_tag=PHA56_16770 NZ_CP116214.1 Protein Homology CDS 3512330 3513373 . - 0 ID=cds-WP_014228955.1;Parent=gene-PHA56_RS16770;Dbxref=Genbank:WP_014228955.1;Name=WP_014228955.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226388.1;locus_tag=PHA56_RS16770;product=NAD(P)-dependent alcohol dehydrogenase;protein_id=WP_014228955.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3513391 3514770 . - . ID=gene-PHA56_RS16775;Name=PHA56_RS16775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS16775;old_locus_tag=PHA56_16775 NZ_CP116214.1 Protein Homology CDS 3513391 3514770 . - 0 ID=cds-WP_014228954.1;Parent=gene-PHA56_RS16775;Dbxref=Genbank:WP_014228954.1;Name=WP_014228954.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416289.1;locus_tag=PHA56_RS16775;product=MFS transporter;protein_id=WP_014228954.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3514797 3515873 . - . ID=gene-PHA56_RS16780;Name=PHA56_RS16780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS16780;old_locus_tag=PHA56_16780 NZ_CP116214.1 Protein Homology CDS 3514797 3515873 . - 0 ID=cds-WP_014228953.1;Parent=gene-PHA56_RS16780;Dbxref=Genbank:WP_014228953.1;Name=WP_014228953.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310512.1;locus_tag=PHA56_RS16780;product=zinc-binding dehydrogenase;protein_id=WP_014228953.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3516199 3517452 . + . ID=gene-PHA56_RS16785;Name=PHA56_RS16785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS16785;old_locus_tag=PHA56_16785 NZ_CP116214.1 Protein Homology CDS 3516199 3517452 . + 0 ID=cds-WP_119834418.1;Parent=gene-PHA56_RS16785;Dbxref=Genbank:WP_119834418.1;Name=WP_119834418.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014228952.1;locus_tag=PHA56_RS16785;product=glycoside hydrolase family 18 protein;protein_id=WP_119834418.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3517553 3517897 . + . ID=gene-PHA56_RS16790;Name=yajD;gbkey=Gene;gene=yajD;gene_biotype=protein_coding;locus_tag=PHA56_RS16790;old_locus_tag=PHA56_16790 NZ_CP116214.1 Protein Homology CDS 3517553 3517897 . + 0 ID=cds-WP_004138290.1;Parent=gene-PHA56_RS16790;Dbxref=Genbank:WP_004138290.1;Name=WP_004138290.1;gbkey=CDS;gene=yajD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226383.1;locus_tag=PHA56_RS16790;product=HNH nuclease YajD;protein_id=WP_004138290.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3517958 3518233 . - . ID=gene-PHA56_RS16795;Name=PHA56_RS16795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS16795;old_locus_tag=PHA56_16795 NZ_CP116214.1 Protein Homology CDS 3517958 3518233 . - 0 ID=cds-WP_004850031.1;Parent=gene-PHA56_RS16795;Dbxref=Genbank:WP_004850031.1;Name=WP_004850031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006684885.1;locus_tag=PHA56_RS16795;product=YeaC family protein;protein_id=WP_004850031.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3518276 3518689 . - . ID=gene-PHA56_RS16800;Name=msrB;gbkey=Gene;gene=msrB;gene_biotype=protein_coding;locus_tag=PHA56_RS16800;old_locus_tag=PHA56_16800 NZ_CP116214.1 Protein Homology CDS 3518276 3518689 . - 0 ID=cds-WP_004121465.1;Parent=gene-PHA56_RS16800;Dbxref=Genbank:WP_004121465.1;Name=WP_004121465.1;Ontology_term=GO:0006979,GO:0030091,GO:0033743;gbkey=CDS;gene=msrB;go_function=peptide-methionine (R)-S-oxide reductase activity|0033743||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310514.1;locus_tag=PHA56_RS16800;product=peptide-methionine (R)-S-oxide reductase MsrB;protein_id=WP_004121465.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3519028 3520023 . + . ID=gene-PHA56_RS16805;Name=gapA;gbkey=Gene;gene=gapA;gene_biotype=protein_coding;locus_tag=PHA56_RS16805;old_locus_tag=PHA56_16805 NZ_CP116214.1 Protein Homology CDS 3519028 3520023 . + 0 ID=cds-WP_004138295.1;Parent=gene-PHA56_RS16805;Dbxref=Genbank:WP_004138295.1;Name=WP_004138295.1;gbkey=CDS;gene=gapA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006322611.1;locus_tag=PHA56_RS16805;product=glyceraldehyde-3-phosphate dehydrogenase;protein_id=WP_004138295.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3520098 3520982 . + . ID=gene-PHA56_RS16810;Name=PHA56_RS16810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS16810;old_locus_tag=PHA56_16810 NZ_CP116214.1 Protein Homology CDS 3520098 3520982 . + 0 ID=cds-WP_014228951.1;Parent=gene-PHA56_RS16810;Dbxref=Genbank:WP_014228951.1;Name=WP_014228951.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226379.1;locus_tag=PHA56_RS16810;product=D-hexose-6-phosphate mutarotase;protein_id=WP_014228951.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3521081 3521935 . - . ID=gene-PHA56_RS16815;Name=PHA56_RS16815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS16815;old_locus_tag=PHA56_16815 NZ_CP116214.1 Protein Homology CDS 3521081 3521935 . - 0 ID=cds-WP_014228950.1;Parent=gene-PHA56_RS16815;Dbxref=Genbank:WP_014228950.1;Name=WP_014228950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014599128.1;locus_tag=PHA56_RS16815;product=aldo/keto reductase;protein_id=WP_014228950.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3522028 3522774 . - . ID=gene-PHA56_RS16820;Name=PHA56_RS16820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS16820;old_locus_tag=PHA56_16820 NZ_CP116214.1 Protein Homology CDS 3522028 3522774 . - 0 ID=cds-WP_004850021.1;Parent=gene-PHA56_RS16820;Dbxref=Genbank:WP_004850021.1;Name=WP_004850021.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226377.1;locus_tag=PHA56_RS16820;product=MipA/OmpV family protein;protein_id=WP_004850021.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3523202 3525136 . + . ID=gene-PHA56_RS16825;Name=yeaG;gbkey=Gene;gene=yeaG;gene_biotype=protein_coding;locus_tag=PHA56_RS16825;old_locus_tag=PHA56_16825 NZ_CP116214.1 Protein Homology CDS 3523202 3525136 . + 0 ID=cds-WP_004121478.1;Parent=gene-PHA56_RS16825;Dbxref=Genbank:WP_004121478.1;Name=WP_004121478.1;gbkey=CDS;gene=yeaG;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226376.1;locus_tag=PHA56_RS16825;product=protein kinase YeaG;protein_id=WP_004121478.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3525268 3526551 . + . ID=gene-PHA56_RS16830;Name=PHA56_RS16830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS16830;old_locus_tag=PHA56_16830 NZ_CP116214.1 Protein Homology CDS 3525268 3526551 . + 0 ID=cds-WP_004138302.1;Parent=gene-PHA56_RS16830;Dbxref=Genbank:WP_004138302.1;Name=WP_004138302.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004101255.1;locus_tag=PHA56_RS16830;product=YeaH/YhbH family protein;protein_id=WP_004138302.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3526600 3527757 . - . ID=gene-PHA56_RS16835;Name=PHA56_RS16835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS16835;old_locus_tag=PHA56_16835 NZ_CP116214.1 Protein Homology CDS 3526600 3527757 . - 0 ID=cds-WP_014228948.1;Parent=gene-PHA56_RS16835;Dbxref=Genbank:WP_014228948.1;Name=WP_014228948.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014228948.1;locus_tag=PHA56_RS16835;product=glycosyltransferase family 9 protein;protein_id=WP_014228948.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3528119 3529615 . + . ID=gene-PHA56_RS16840;Name=dgcJ;gbkey=Gene;gene=dgcJ;gene_biotype=protein_coding;locus_tag=PHA56_RS16840;old_locus_tag=PHA56_16840 NZ_CP116214.1 Protein Homology CDS 3528119 3529615 . + 0 ID=cds-WP_014228946.1;Parent=gene-PHA56_RS16840;Dbxref=Genbank:WP_014228946.1;Name=WP_014228946.1;Ontology_term=GO:0043709,GO:1902201,GO:0052621;gbkey=CDS;gene=dgcJ;go_function=diguanylate cyclase activity|0052621||IEA;go_process=cell adhesion involved in single-species biofilm formation|0043709||IEA,negative regulation of bacterial-type flagellum-dependent cell motility|1902201||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014228946.1;locus_tag=PHA56_RS16840;product=diguanylate cyclase DgcJ;protein_id=WP_014228946.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3529649 3530149 . + . ID=gene-PHA56_RS16845;Name=PHA56_RS16845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS16845;old_locus_tag=PHA56_16845 NZ_CP116214.1 Protein Homology CDS 3529649 3530149 . + 0 ID=cds-WP_004850011.1;Parent=gene-PHA56_RS16845;Dbxref=Genbank:WP_004850011.1;Name=WP_004850011.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009653484.1;locus_tag=PHA56_RS16845;product=YbaK/prolyl-tRNA synthetase associated domain-containing protein;protein_id=WP_004850011.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3530313 3530759 . + . ID=gene-PHA56_RS16850;Name=PHA56_RS16850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS16850;old_locus_tag=PHA56_16850 NZ_CP116214.1 Protein Homology CDS 3530313 3530759 . + 0 ID=cds-WP_004138309.1;Parent=gene-PHA56_RS16850;Dbxref=Genbank:WP_004138309.1;Name=WP_004138309.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226359.1;locus_tag=PHA56_RS16850;product=DUF441 domain-containing protein;protein_id=WP_004138309.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3530743 3531537 . - . ID=gene-PHA56_RS16855;Name=PHA56_RS16855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS16855;old_locus_tag=PHA56_16855 NZ_CP116214.1 Protein Homology CDS 3530743 3531537 . - 0 ID=cds-WP_162097192.1;Parent=gene-PHA56_RS16855;Dbxref=Genbank:WP_162097192.1;Name=WP_162097192.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226358.1;locus_tag=PHA56_RS16855;product=helix-turn-helix transcriptional regulator;protein_id=WP_162097192.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3531635 3532819 . + . ID=gene-PHA56_RS16860;Name=PHA56_RS16860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS16860;old_locus_tag=PHA56_16860 NZ_CP116214.1 Protein Homology CDS 3531635 3532819 . + 0 ID=cds-WP_032692759.1;Parent=gene-PHA56_RS16860;Dbxref=Genbank:WP_032692759.1;Name=WP_032692759.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004850006.1;locus_tag=PHA56_RS16860;product=CynX/NimT family MFS transporter;protein_id=WP_032692759.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3532857 3533549 . - . ID=gene-PHA56_RS16865;Name=PHA56_RS16865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS16865;old_locus_tag=PHA56_16865 NZ_CP116214.1 Protein Homology CDS 3532857 3533549 . - 0 ID=cds-WP_014838173.1;Parent=gene-PHA56_RS16865;Dbxref=Genbank:WP_014838173.1;Name=WP_014838173.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226356.1;locus_tag=PHA56_RS16865;product=CTP synthase;protein_id=WP_014838173.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3533712 3534221 . + . ID=gene-PHA56_RS16870;Name=PHA56_RS16870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS16870;old_locus_tag=PHA56_16870 NZ_CP116214.1 Protein Homology CDS 3533712 3534221 . + 0 ID=cds-WP_014228941.1;Parent=gene-PHA56_RS16870;Dbxref=Genbank:WP_014228941.1;Name=WP_014228941.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226355.1;locus_tag=PHA56_RS16870;product=DUF523 domain-containing protein;protein_id=WP_014228941.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3534208 3534552 . + . ID=gene-PHA56_RS16875;Name=PHA56_RS16875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS16875;old_locus_tag=PHA56_16875 NZ_CP116214.1 Protein Homology CDS 3534208 3534552 . + 0 ID=cds-WP_014228940.1;Parent=gene-PHA56_RS16875;Dbxref=Genbank:WP_014228940.1;Name=WP_014228940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004131592.1;locus_tag=PHA56_RS16875;product=DUF488 domain-containing protein;protein_id=WP_014228940.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3534547 3534786 . - . ID=gene-PHA56_RS16880;Name=PHA56_RS16880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS16880;old_locus_tag=PHA56_16880 NZ_CP116214.1 Protein Homology CDS 3534547 3534786 . - 0 ID=cds-WP_014228939.1;Parent=gene-PHA56_RS16880;Dbxref=Genbank:WP_014228939.1;Name=WP_014228939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008807687.1;locus_tag=PHA56_RS16880;product=DUF333 domain-containing protein;protein_id=WP_014228939.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3535083 3536096 . + . ID=gene-PHA56_RS16885;Name=PHA56_RS16885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS16885;old_locus_tag=PHA56_16885 NZ_CP116214.1 Protein Homology CDS 3535083 3536096 . + 0 ID=cds-WP_014228938.1;Parent=gene-PHA56_RS16885;Dbxref=Genbank:WP_014228938.1;Name=WP_014228938.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226352.1;locus_tag=PHA56_RS16885;product=sensor domain-containing diguanylate cyclase;protein_id=WP_014228938.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3536154 3536255 . + . ID=gene-PHA56_RS16890;Name=PHA56_RS16890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS16890;old_locus_tag=PHA56_16890 NZ_CP116214.1 Protein Homology CDS 3536154 3536255 . + 0 ID=cds-WP_004101234.1;Parent=gene-PHA56_RS16890;Dbxref=Genbank:WP_004101234.1;Name=WP_004101234.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004150782.1;locus_tag=PHA56_RS16890;product=YoaK family small membrane protein;protein_id=WP_004101234.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3536470 3536595 . + . ID=gene-PHA56_RS16895;Name=PHA56_RS16895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS16895;old_locus_tag=PHA56_16895 NZ_CP116214.1 Protein Homology CDS 3536470 3536595 . + 0 ID=cds-WP_086074258.1;Parent=gene-PHA56_RS16895;Dbxref=Genbank:WP_086074258.1;Name=WP_086074258.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009653461.1;locus_tag=PHA56_RS16895;product=hypothetical protein;protein_id=WP_086074258.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3536644 3536907 . - . ID=gene-PHA56_RS16900;Name=PHA56_RS16900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS16900;old_locus_tag=PHA56_16900 NZ_CP116214.1 Protein Homology CDS 3536644 3536907 . - 0 ID=cds-WP_004131510.1;Parent=gene-PHA56_RS16900;Dbxref=Genbank:WP_004131510.1;Name=WP_004131510.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226349.1;locus_tag=PHA56_RS16900;product=DUF2534 family protein;protein_id=WP_004131510.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3537037 3537675 . - . ID=gene-PHA56_RS16905;Name=leuE;gbkey=Gene;gene=leuE;gene_biotype=protein_coding;locus_tag=PHA56_RS16905;old_locus_tag=PHA56_16905 NZ_CP116214.1 Protein Homology CDS 3537037 3537675 . - 0 ID=cds-WP_014838171.1;Parent=gene-PHA56_RS16905;Dbxref=Genbank:WP_014838171.1;Name=WP_014838171.1;Ontology_term=GO:0006865;gbkey=CDS;gene=leuE;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226348.1;locus_tag=PHA56_RS16905;product=leucine efflux protein LeuE;protein_id=WP_014838171.1;transl_table=11 NZ_CP116214.1 RefSeq pseudogene 3537766 3538679 . - . ID=gene-PHA56_RS16910;Name=lpxP;gbkey=Gene;gene=lpxP;gene_biotype=pseudogene;locus_tag=PHA56_RS16910;old_locus_tag=PHA56_16910;pseudo=true NZ_CP116214.1 Protein Homology CDS 3537766 3538679 . - 0 ID=cds-PHA56_RS16910;Parent=gene-PHA56_RS16910;Note=frameshifted;Ontology_term=GO:0009409,GO:0036104,GO:0008951,GO:0016020;gbkey=CDS;gene=lpxP;go_component=membrane|0016020||IEA;go_function=palmitoleoyl [acyl-carrier-protein]-dependent acyltransferase activity|0008951||IEA;go_process=response to cold|0009409||IEA,Kdo2-lipid A biosynthetic process|0036104||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226347.1;locus_tag=PHA56_RS16910;product=kdo(2)-lipid IV(A) palmitoleoyltransferase;pseudo=true;transl_table=11 NZ_CP116214.1 RefSeq gene 3539223 3540011 . - . ID=gene-PHA56_RS16915;Name=PHA56_RS16915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS16915;old_locus_tag=PHA56_16915 NZ_CP116214.1 Protein Homology CDS 3539223 3540011 . - 0 ID=cds-WP_014228936.1;Parent=gene-PHA56_RS16915;Dbxref=Genbank:WP_014228936.1;Name=WP_014228936.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004112242.1;locus_tag=PHA56_RS16915;product=class I SAM-dependent methyltransferase;protein_id=WP_014228936.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3540271 3540792 . + . ID=gene-PHA56_RS16920;Name=PHA56_RS16920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS16920;old_locus_tag=PHA56_16920 NZ_CP116214.1 Protein Homology CDS 3540271 3540792 . + 0 ID=cds-WP_014838169.1;Parent=gene-PHA56_RS16920;Dbxref=Genbank:WP_014838169.1;Name=WP_014838169.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014228935.1;locus_tag=PHA56_RS16920;product=sigma-70 family RNA polymerase sigma factor;protein_id=WP_014838169.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3540789 3541736 . + . ID=gene-PHA56_RS16925;Name=fecR;gbkey=Gene;gene=fecR;gene_biotype=protein_coding;locus_tag=PHA56_RS16925;old_locus_tag=PHA56_16925 NZ_CP116214.1 Protein Homology CDS 3540789 3541736 . + 0 ID=cds-WP_038424327.1;Parent=gene-PHA56_RS16925;Dbxref=Genbank:WP_038424327.1;Name=WP_038424327.1;gbkey=CDS;gene=fecR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017146103.1;locus_tag=PHA56_RS16925;product=fec operon regulator FecR;protein_id=WP_038424327.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3541835 3544171 . + . ID=gene-PHA56_RS16930;Name=PHA56_RS16930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS16930;old_locus_tag=PHA56_16930 NZ_CP116214.1 Protein Homology CDS 3541835 3544171 . + 0 ID=cds-WP_014228933.1;Parent=gene-PHA56_RS16930;Dbxref=Genbank:WP_014228933.1;Name=WP_014228933.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418711.1;locus_tag=PHA56_RS16930;product=TonB-dependent receptor family protein;protein_id=WP_014228933.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3544230 3545132 . + . ID=gene-PHA56_RS16935;Name=PHA56_RS16935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS16935;old_locus_tag=PHA56_16935 NZ_CP116214.1 Protein Homology CDS 3544230 3545132 . + 0 ID=cds-WP_038424326.1;Parent=gene-PHA56_RS16935;Dbxref=Genbank:WP_038424326.1;Name=WP_038424326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014838166.1;locus_tag=PHA56_RS16935;product=Fe(3+) dicitrate ABC transporter substrate-binding protein FecB;protein_id=WP_038424326.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3545129 3546127 . + . ID=gene-PHA56_RS16940;Name=fecC;gbkey=Gene;gene=fecC;gene_biotype=protein_coding;locus_tag=PHA56_RS16940;old_locus_tag=PHA56_16940 NZ_CP116214.1 Protein Homology CDS 3545129 3546127 . + 0 ID=cds-WP_025106937.1;Parent=gene-PHA56_RS16940;Dbxref=Genbank:WP_025106937.1;Name=WP_025106937.1;gbkey=CDS;gene=fecC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014228931.1;locus_tag=PHA56_RS16940;product=iron-dicitrate ABC transporter permease FecC;protein_id=WP_025106937.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3546187 3547077 . + . ID=gene-PHA56_RS16945;Name=fecD;gbkey=Gene;gene=fecD;gene_biotype=protein_coding;locus_tag=PHA56_RS16945;old_locus_tag=PHA56_16945 NZ_CP116214.1 Protein Homology CDS 3546187 3547077 . + 0 ID=cds-WP_236039754.1;Parent=gene-PHA56_RS16945;Dbxref=Genbank:WP_236039754.1;Name=WP_236039754.1;gbkey=CDS;gene=fecD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013185274.1;locus_tag=PHA56_RS16945;product=Fe(3+) dicitrate ABC transporter permease subunit FecD;protein_id=WP_236039754.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3547078 3547845 . + . ID=gene-PHA56_RS16950;Name=fecE;gbkey=Gene;gene=fecE;gene_biotype=protein_coding;locus_tag=PHA56_RS16950;old_locus_tag=PHA56_16950 NZ_CP116214.1 Protein Homology CDS 3547078 3547845 . + 0 ID=cds-WP_014228929.1;Parent=gene-PHA56_RS16950;Dbxref=Genbank:WP_014228929.1;Name=WP_014228929.1;Ontology_term=GO:0005524;gbkey=CDS;gene=fecE;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004118249.1;locus_tag=PHA56_RS16950;product=Fe(3+) dicitrate ABC transporter ATP-binding protein FecE;protein_id=WP_014228929.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3547882 3548925 . - . ID=gene-PHA56_RS16955;Name=fraE;gbkey=Gene;gene=fraE;gene_biotype=protein_coding;locus_tag=PHA56_RS16955;old_locus_tag=PHA56_16955 NZ_CP116214.1 Protein Homology CDS 3547882 3548925 . - 0 ID=cds-WP_009653379.1;Parent=gene-PHA56_RS16955;Dbxref=Genbank:WP_009653379.1;Name=WP_009653379.1;gbkey=CDS;gene=fraE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226344.1;locus_tag=PHA56_RS16955;product=fructose-asparagine asparaginase;protein_id=WP_009653379.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3549205 3550395 . + . ID=gene-PHA56_RS16960;Name=PHA56_RS16960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS16960;old_locus_tag=PHA56_16960 NZ_CP116214.1 Protein Homology CDS 3549205 3550395 . + 0 ID=cds-WP_038424323.1;Parent=gene-PHA56_RS16960;Dbxref=Genbank:WP_038424323.1;Name=WP_038424323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009653474.1;locus_tag=PHA56_RS16960;product=HD domain-containing protein;protein_id=WP_038424323.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3550473 3552257 . + . ID=gene-PHA56_RS16965;Name=PHA56_RS16965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS16965;old_locus_tag=PHA56_16965 NZ_CP116214.1 Protein Homology CDS 3550473 3552257 . + 0 ID=cds-WP_038424322.1;Parent=gene-PHA56_RS16965;Dbxref=Genbank:WP_038424322.1;Name=WP_038424322.1;Ontology_term=GO:0009966,GO:0009975;gbkey=CDS;go_function=cyclase activity|0009975||IEA;go_process=regulation of signal transduction|0009966||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017146106.1;locus_tag=PHA56_RS16965;product=sensor domain-containing diguanylate cyclase;protein_id=WP_038424322.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3552424 3552858 . - . ID=gene-PHA56_RS16970;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=PHA56_RS16970;old_locus_tag=PHA56_16970 NZ_CP116214.1 Protein Homology CDS 3552424 3552858 . - 0 ID=cds-WP_014228411.1-2;Parent=gene-PHA56_RS16970;Dbxref=Genbank:WP_014228411.1;Name=WP_014228411.1;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000525033.1;locus_tag=PHA56_RS16970;product=IS200/IS605 family transposase;protein_id=WP_014228411.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3553032 3554282 . - . ID=gene-PHA56_RS16975;Name=icd;gbkey=Gene;gene=icd;gene_biotype=protein_coding;locus_tag=PHA56_RS16975;old_locus_tag=PHA56_16975 NZ_CP116214.1 Protein Homology CDS 3553032 3554282 . - 0 ID=cds-WP_004131480.1;Parent=gene-PHA56_RS16975;Dbxref=Genbank:WP_004131480.1;Name=WP_004131480.1;Ontology_term=GO:0006099,GO:0000287,GO:0004450,GO:0051287;gbkey=CDS;gene=icd;go_function=magnesium ion binding|0000287||IEA,isocitrate dehydrogenase (NADP+) activity|0004450||IEA,NAD binding|0051287||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000444467.1;locus_tag=PHA56_RS16975;product=NADP-dependent isocitrate dehydrogenase;protein_id=WP_004131480.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3554519 3555181 . + . ID=gene-PHA56_RS16980;Name=rluE;gbkey=Gene;gene=rluE;gene_biotype=protein_coding;locus_tag=PHA56_RS16980;old_locus_tag=PHA56_16980 NZ_CP116214.1 Protein Homology CDS 3554519 3555181 . + 0 ID=cds-WP_038423232.1;Parent=gene-PHA56_RS16980;Dbxref=Genbank:WP_038423232.1;Name=WP_038423232.1;Ontology_term=GO:0001522,GO:0009982;gbkey=CDS;gene=rluE;go_function=pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004849978.1;locus_tag=PHA56_RS16980;product=23S rRNA pseudouridine(2457) synthase RluE;protein_id=WP_038423232.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3555191 3555667 . + . ID=gene-PHA56_RS16985;Name=PHA56_RS16985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS16985;old_locus_tag=PHA56_16985 NZ_CP116214.1 Protein Homology CDS 3555191 3555667 . + 0 ID=cds-WP_014838108.1;Parent=gene-PHA56_RS16985;Dbxref=Genbank:WP_014838108.1;Name=WP_014838108.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004101193.1;locus_tag=PHA56_RS16985;product=NUDIX hydrolase;protein_id=WP_014838108.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3555706 3556812 . + . ID=gene-PHA56_RS16990;Name=mnmA;gbkey=Gene;gene=mnmA;gene_biotype=protein_coding;locus_tag=PHA56_RS16990;old_locus_tag=PHA56_16990 NZ_CP116214.1 Protein Homology CDS 3555706 3556812 . + 0 ID=cds-WP_004849976.1;Parent=gene-PHA56_RS16990;Dbxref=Genbank:WP_004849976.1;Name=WP_004849976.1;Ontology_term=GO:0002143,GO:0006396,GO:0004808,GO:0016783,GO:0005737;gbkey=CDS;gene=mnmA;go_component=cytoplasm|0005737||IEA;go_function=tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity|0004808||IEA,sulfurtransferase activity|0016783||IEA;go_process=tRNA wobble position uridine thiolation|0002143||IEA,RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226318.1;locus_tag=PHA56_RS16990;product=tRNA 2-thiouridine(34) synthase MnmA;protein_id=WP_004849976.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3556872 3557513 . + . ID=gene-PHA56_RS16995;Name=hflD;gbkey=Gene;gene=hflD;gene_biotype=protein_coding;locus_tag=PHA56_RS16995;old_locus_tag=PHA56_16995 NZ_CP116214.1 Protein Homology CDS 3556872 3557513 . + 0 ID=cds-WP_004131471.1;Parent=gene-PHA56_RS16995;Dbxref=Genbank:WP_004131471.1;Name=WP_004131471.1;gbkey=CDS;gene=hflD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226317.1;locus_tag=PHA56_RS16995;product=high frequency lysogenization protein HflD;protein_id=WP_004131471.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3557517 3558887 . + . ID=gene-PHA56_RS17000;Name=purB;gbkey=Gene;gene=purB;gene_biotype=protein_coding;locus_tag=PHA56_RS17000;old_locus_tag=PHA56_17000 NZ_CP116214.1 Protein Homology CDS 3557517 3558887 . + 0 ID=cds-WP_014228873.1;Parent=gene-PHA56_RS17000;Dbxref=Genbank:WP_014228873.1;Name=WP_014228873.1;Ontology_term=GO:0006188,GO:0009152,GO:0004018;gbkey=CDS;gene=purB;go_function=N6-(1%2C2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity|0004018||IEA;go_process=IMP biosynthetic process|0006188||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002950897.1;locus_tag=PHA56_RS17000;product=adenylosuccinate lyase;protein_id=WP_014228873.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3558937 3560151 . - . ID=gene-PHA56_RS17005;Name=PHA56_RS17005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS17005;old_locus_tag=PHA56_17005 NZ_CP116214.1 Protein Homology CDS 3558937 3560151 . - 0 ID=cds-WP_014838106.1;Parent=gene-PHA56_RS17005;Dbxref=Genbank:WP_014838106.1;Name=WP_014838106.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004101183.1;locus_tag=PHA56_RS17005;product=MFS transporter;protein_id=WP_014838106.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3560251 3560697 . + . ID=gene-PHA56_RS17010;Name=PHA56_RS17010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS17010;old_locus_tag=PHA56_17010 NZ_CP116214.1 Protein Homology CDS 3560251 3560697 . + 0 ID=cds-WP_014228871.1;Parent=gene-PHA56_RS17010;Dbxref=Genbank:WP_014228871.1;Name=WP_014228871.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004849973.1;locus_tag=PHA56_RS17010;product=helix-turn-helix domain-containing protein;protein_id=WP_014228871.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3560783 3561457 . + . ID=gene-PHA56_RS17015;Name=phoP;gbkey=Gene;gene=phoP;gene_biotype=protein_coding;locus_tag=PHA56_RS17015;old_locus_tag=PHA56_17015 NZ_CP116214.1 Protein Homology CDS 3560783 3561457 . + 0 ID=cds-WP_004101181.1;Parent=gene-PHA56_RS17015;Dbxref=Genbank:WP_004101181.1;Name=WP_004101181.1;gbkey=CDS;gene=phoP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015964830.1;locus_tag=PHA56_RS17015;product=two-component system response regulator PhoP;protein_id=WP_004101181.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3561454 3562920 . + . ID=gene-PHA56_RS17020;Name=phoQ;gbkey=Gene;gene=phoQ;gene_biotype=protein_coding;locus_tag=PHA56_RS17020;old_locus_tag=PHA56_17020 NZ_CP116214.1 Protein Homology CDS 3561454 3562920 . + 0 ID=cds-WP_004849971.1;Parent=gene-PHA56_RS17020;Dbxref=Genbank:WP_004849971.1;Name=WP_004849971.1;Ontology_term=GO:0000160,GO:0000155,GO:0004673,GO:0016772;gbkey=CDS;gene=phoQ;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226312.1;locus_tag=PHA56_RS17020;product=two-component system sensor histidine kinase PhoQ;protein_id=WP_004849971.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3563007 3564128 . + . ID=gene-PHA56_RS17025;Name=PHA56_RS17025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS17025;old_locus_tag=PHA56_17025 NZ_CP116214.1 Protein Homology CDS 3563007 3564128 . + 0 ID=cds-WP_004849969.1;Parent=gene-PHA56_RS17025;Dbxref=Genbank:WP_004849969.1;Name=WP_004849969.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226311.1;locus_tag=PHA56_RS17025;product=cupin domain-containing protein;protein_id=WP_004849969.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3564184 3565413 . - . ID=gene-PHA56_RS17030;Name=pepT;gbkey=Gene;gene=pepT;gene_biotype=protein_coding;locus_tag=PHA56_RS17030;old_locus_tag=PHA56_17030 NZ_CP116214.1 Protein Homology CDS 3564184 3565413 . - 0 ID=cds-WP_014228870.1;Parent=gene-PHA56_RS17030;Dbxref=Genbank:WP_014228870.1;Name=WP_014228870.1;Ontology_term=GO:0006508,GO:0045148;gbkey=CDS;gene=pepT;go_function=tripeptide aminopeptidase activity|0045148||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004849966.1;locus_tag=PHA56_RS17030;product=peptidase T;protein_id=WP_014228870.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3565671 3566807 . + . ID=gene-PHA56_RS17035;Name=potA;gbkey=Gene;gene=potA;gene_biotype=protein_coding;locus_tag=PHA56_RS17035;old_locus_tag=PHA56_17035 NZ_CP116214.1 Protein Homology CDS 3565671 3566807 . + 0 ID=cds-WP_014228869.1;Parent=gene-PHA56_RS17035;Dbxref=Genbank:WP_014228869.1;Name=WP_014228869.1;Ontology_term=GO:0015846,GO:0005524,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=potA;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226309.1;locus_tag=PHA56_RS17035;product=spermidine/putrescine ABC transporter ATP-binding protein PotA;protein_id=WP_014228869.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3566791 3567648 . + . ID=gene-PHA56_RS17040;Name=potB;gbkey=Gene;gene=potB;gene_biotype=protein_coding;locus_tag=PHA56_RS17040;old_locus_tag=PHA56_17040 NZ_CP116214.1 Protein Homology CDS 3566791 3567648 . + 0 ID=cds-WP_004849963.1;Parent=gene-PHA56_RS17040;Dbxref=Genbank:WP_004849963.1;Name=WP_004849963.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=potB;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226308.1;locus_tag=PHA56_RS17040;product=spermidine/putrescine ABC transporter permease PotB;protein_id=WP_004849963.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3567645 3568430 . + . ID=gene-PHA56_RS17045;Name=potC;gbkey=Gene;gene=potC;gene_biotype=protein_coding;locus_tag=PHA56_RS17045;old_locus_tag=PHA56_17045 NZ_CP116214.1 Protein Homology CDS 3567645 3568430 . + 0 ID=cds-WP_004849960.1;Parent=gene-PHA56_RS17045;Dbxref=Genbank:WP_004849960.1;Name=WP_004849960.1;Ontology_term=GO:0055085;gbkey=CDS;gene=potC;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226307.1;locus_tag=PHA56_RS17045;product=spermidine/putrescine ABC transporter permease PotC;protein_id=WP_004849960.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3568427 3569473 . + . ID=gene-PHA56_RS17050;Name=potD;gbkey=Gene;gene=potD;gene_biotype=protein_coding;locus_tag=PHA56_RS17050;old_locus_tag=PHA56_17050 NZ_CP116214.1 Protein Homology CDS 3568427 3569473 . + 0 ID=cds-WP_014228868.1;Parent=gene-PHA56_RS17050;Dbxref=Genbank:WP_014228868.1;Name=WP_014228868.1;Ontology_term=GO:0015846,GO:0019808,GO:0042597;gbkey=CDS;gene=potD;go_component=periplasmic space|0042597||IEA;go_function=polyamine binding|0019808||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121082.1;locus_tag=PHA56_RS17050;product=spermidine/putrescine ABC transporter substrate-binding protein PotD;protein_id=WP_014228868.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3569530 3569811 . - . ID=gene-PHA56_RS17055;Name=PHA56_RS17055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS17055;old_locus_tag=PHA56_17055 NZ_CP116214.1 Protein Homology CDS 3569530 3569811 . - 0 ID=cds-WP_014228867.1;Parent=gene-PHA56_RS17055;Dbxref=Genbank:WP_014228867.1;Name=WP_014228867.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014228867.1;locus_tag=PHA56_RS17055;product=hypothetical protein;protein_id=WP_014228867.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3570060 3572063 . - . ID=gene-PHA56_RS17060;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=PHA56_RS17060;old_locus_tag=PHA56_17060 NZ_CP116214.1 Protein Homology CDS 3570060 3572063 . - 0 ID=cds-WP_038424321.1;Parent=gene-PHA56_RS17060;Dbxref=Genbank:WP_038424321.1;Name=WP_038424321.1;Ontology_term=GO:0006098,GO:0004802,GO:0005737;gbkey=CDS;gene=tkt;go_component=cytoplasm|0005737||IEA;go_function=transketolase activity|0004802||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017146112.1;locus_tag=PHA56_RS17060;product=transketolase;protein_id=WP_038424321.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3572082 3573032 . - . ID=gene-PHA56_RS17065;Name=tal;gbkey=Gene;gene=tal;gene_biotype=protein_coding;locus_tag=PHA56_RS17065;old_locus_tag=PHA56_17065 NZ_CP116214.1 Protein Homology CDS 3572082 3573032 . - 0 ID=cds-WP_014228865.1;Parent=gene-PHA56_RS17065;Dbxref=Genbank:WP_014228865.1;Name=WP_014228865.1;Ontology_term=GO:0006098,GO:0004801;gbkey=CDS;gene=tal;go_function=transaldolase activity|0004801||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016807641.1;locus_tag=PHA56_RS17065;product=transaldolase;protein_id=WP_014228865.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3573063 3573521 . - . ID=gene-PHA56_RS17070;Name=rpiB;gbkey=Gene;gene=rpiB;gene_biotype=protein_coding;locus_tag=PHA56_RS17070;old_locus_tag=PHA56_17070 NZ_CP116214.1 Protein Homology CDS 3573063 3573521 . - 0 ID=cds-WP_014228864.1;Parent=gene-PHA56_RS17070;Dbxref=Genbank:WP_014228864.1;Name=WP_014228864.1;Ontology_term=GO:0009052,GO:0004751;gbkey=CDS;gene=rpiB;go_function=ribose-5-phosphate isomerase activity|0004751||IEA;go_process=pentose-phosphate shunt%2C non-oxidative branch|0009052||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015367158.1;locus_tag=PHA56_RS17070;product=ribose 5-phosphate isomerase B;protein_id=WP_014228864.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3573518 3573925 . - . ID=gene-PHA56_RS17075;Name=PHA56_RS17075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS17075;old_locus_tag=PHA56_17075 NZ_CP116214.1 Protein Homology CDS 3573518 3573925 . - 0 ID=cds-WP_050548567.1;Parent=gene-PHA56_RS17075;Dbxref=Genbank:WP_050548567.1;Name=WP_050548567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016160623.1;locus_tag=PHA56_RS17075;product=PTS glucitol/sorbitol transporter subunit IIA;protein_id=WP_050548567.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3573927 3574946 . - . ID=gene-PHA56_RS17080;Name=PHA56_RS17080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS17080;old_locus_tag=PHA56_17080 NZ_CP116214.1 Protein Homology CDS 3573927 3574946 . - 0 ID=cds-WP_014228862.1;Parent=gene-PHA56_RS17080;Dbxref=Genbank:WP_014228862.1;Name=WP_014228862.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004190951.1;locus_tag=PHA56_RS17080;product=2-keto-3-deoxygluconate permease;protein_id=WP_014228862.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3575039 3576757 . - . ID=gene-PHA56_RS17085;Name=PHA56_RS17085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS17085;old_locus_tag=PHA56_17085 NZ_CP116214.1 Protein Homology CDS 3575039 3576757 . - 0 ID=cds-WP_038424320.1;Parent=gene-PHA56_RS17085;Dbxref=Genbank:WP_038424320.1;Name=WP_038424320.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014228861.1;locus_tag=PHA56_RS17085;product=four-carbon acid sugar kinase family protein;protein_id=WP_038424320.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3576793 3577800 . - . ID=gene-PHA56_RS17090;Name=pdxA;gbkey=Gene;gene=pdxA;gene_biotype=protein_coding;locus_tag=PHA56_RS17090;old_locus_tag=PHA56_17090 NZ_CP116214.1 Protein Homology CDS 3576793 3577800 . - 0 ID=cds-WP_014228860.1;Parent=gene-PHA56_RS17090;Dbxref=Genbank:WP_014228860.1;Name=WP_014228860.1;gbkey=CDS;gene=pdxA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014228860.1;locus_tag=PHA56_RS17090;product=4-hydroxythreonine-4-phosphate dehydrogenase PdxA;protein_id=WP_014228860.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3578043 3578837 . + . ID=gene-PHA56_RS17095;Name=PHA56_RS17095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS17095;old_locus_tag=PHA56_17095 NZ_CP116214.1 Protein Homology CDS 3578043 3578837 . + 0 ID=cds-WP_032719679.1;Parent=gene-PHA56_RS17095;Dbxref=Genbank:WP_032719679.1;Name=WP_032719679.1;Ontology_term=GO:0004807;gbkey=CDS;go_function=triose-phosphate isomerase activity|0004807||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004131437.1;locus_tag=PHA56_RS17095;product=triose-phosphate isomerase;protein_id=WP_032719679.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3578879 3579841 . + . ID=gene-PHA56_RS17100;Name=PHA56_RS17100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS17100;old_locus_tag=PHA56_17100 NZ_CP116214.1 Protein Homology CDS 3578879 3579841 . + 0 ID=cds-WP_004101147.1;Parent=gene-PHA56_RS17100;Dbxref=Genbank:WP_004101147.1;Name=WP_004101147.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020324988.1;locus_tag=PHA56_RS17100;product=sugar-binding transcriptional regulator;protein_id=WP_004101147.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3580137 3580967 . - . ID=gene-PHA56_RS17105;Name=cobB;gbkey=Gene;gene=cobB;gene_biotype=protein_coding;locus_tag=PHA56_RS17105;old_locus_tag=PHA56_17105 NZ_CP116214.1 Protein Homology CDS 3580137 3580967 . - 0 ID=cds-WP_014838101.1;Parent=gene-PHA56_RS17105;Dbxref=Genbank:WP_014838101.1;Name=WP_014838101.1;Ontology_term=GO:0070403;gbkey=CDS;gene=cobB;go_function=NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014838101.1;locus_tag=PHA56_RS17105;product=NAD-dependent protein deacylase;protein_id=WP_014838101.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3580982 3581893 . - . ID=gene-PHA56_RS17110;Name=nagK;gbkey=Gene;gene=nagK;gene_biotype=protein_coding;locus_tag=PHA56_RS17110;old_locus_tag=PHA56_17110 NZ_CP116214.1 Protein Homology CDS 3580982 3581893 . - 0 ID=cds-WP_014228857.1;Parent=gene-PHA56_RS17110;Dbxref=Genbank:WP_014228857.1;Name=WP_014228857.1;Ontology_term=GO:0045127;gbkey=CDS;gene=nagK;go_function=N-acetylglucosamine kinase activity|0045127||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014228857.1;locus_tag=PHA56_RS17110;product=N-acetylglucosamine kinase;protein_id=WP_014228857.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3581942 3583186 . - . ID=gene-PHA56_RS17115;Name=lolE;gbkey=Gene;gene=lolE;gene_biotype=protein_coding;locus_tag=PHA56_RS17115;old_locus_tag=PHA56_17115 NZ_CP116214.1 Protein Homology CDS 3581942 3583186 . - 0 ID=cds-WP_038424319.1;Parent=gene-PHA56_RS17115;Dbxref=Genbank:WP_038424319.1;Name=WP_038424319.1;Ontology_term=GO:0042953;gbkey=CDS;gene=lolE;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460189.1;locus_tag=PHA56_RS17115;product=lipoprotein-releasing ABC transporter permease subunit LolE;protein_id=WP_038424319.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3583186 3583887 . - . ID=gene-PHA56_RS17120;Name=lolD;gbkey=Gene;gene=lolD;gene_biotype=protein_coding;locus_tag=PHA56_RS17120;old_locus_tag=PHA56_17120 NZ_CP116214.1 Protein Homology CDS 3583186 3583887 . - 0 ID=cds-WP_014228855.1;Parent=gene-PHA56_RS17120;Dbxref=Genbank:WP_014228855.1;Name=WP_014228855.1;Ontology_term=GO:0042953,GO:0005524,GO:0016020;gbkey=CDS;gene=lolD;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226298.1;locus_tag=PHA56_RS17120;product=lipoprotein-releasing ABC transporter ATP-binding protein LolD;protein_id=WP_014228855.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3583880 3585079 . - . ID=gene-PHA56_RS17125;Name=lolC;gbkey=Gene;gene=lolC;gene_biotype=protein_coding;locus_tag=PHA56_RS17125;old_locus_tag=PHA56_17125 NZ_CP116214.1 Protein Homology CDS 3583880 3585079 . - 0 ID=cds-WP_004849945.1;Parent=gene-PHA56_RS17125;Dbxref=Genbank:WP_004849945.1;Name=WP_004849945.1;Ontology_term=GO:0042953,GO:0016020;gbkey=CDS;gene=lolC;go_component=membrane|0016020||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004976588.1;locus_tag=PHA56_RS17125;product=lipoprotein-releasing ABC transporter permease subunit LolC;protein_id=WP_004849945.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3585385 3588831 . + . ID=gene-PHA56_RS17130;Name=mfd;gbkey=Gene;gene=mfd;gene_biotype=protein_coding;locus_tag=PHA56_RS17130;old_locus_tag=PHA56_17130 NZ_CP116214.1 Protein Homology CDS 3585385 3588831 . + 0 ID=cds-WP_014228854.1;Parent=gene-PHA56_RS17130;Dbxref=Genbank:WP_014228854.1;Name=WP_014228854.1;Ontology_term=GO:0006281,GO:0003676,GO:0003684,GO:0005524;gbkey=CDS;gene=mfd;go_function=nucleic acid binding|0003676||IEA,damaged DNA binding|0003684||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226295.1;locus_tag=PHA56_RS17130;product=transcription-repair coupling factor;protein_id=WP_014228854.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3588998 3589957 . + . ID=gene-PHA56_RS17135;Name=PHA56_RS17135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS17135;old_locus_tag=PHA56_17135 NZ_CP116214.1 Protein Homology CDS 3588998 3589957 . + 0 ID=cds-WP_032719683.1;Parent=gene-PHA56_RS17135;Dbxref=Genbank:WP_032719683.1;Name=WP_032719683.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004131428.1;locus_tag=PHA56_RS17135;product=L%2CD-transpeptidase family protein;protein_id=WP_032719683.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3590179 3590436 . - . ID=gene-PHA56_RS17140;Name=bhsA;gbkey=Gene;gene=bhsA;gene_biotype=protein_coding;gene_synonym=ycfR;locus_tag=PHA56_RS17140;old_locus_tag=PHA56_17140 NZ_CP116214.1 Protein Homology CDS 3590179 3590436 . - 0 ID=cds-WP_004131427.1;Parent=gene-PHA56_RS17140;Dbxref=Genbank:WP_004131427.1;Name=WP_004131427.1;gbkey=CDS;gene=bhsA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226293.1;locus_tag=PHA56_RS17140;product=multiple stress resistance protein BhsA;protein_id=WP_004131427.1;transl_table=11 NZ_CP116214.1 RefSeq pseudogene 3590561 3590623 . + . ID=gene-PHA56_RS17145;Name=PHA56_RS17145;end_range=3590623,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS17145;old_locus_tag=PHA56_17145;partial=true;pseudo=true NZ_CP116214.1 Protein Homology CDS 3590561 3590623 . + 0 ID=cds-PHA56_RS17145;Parent=gene-PHA56_RS17145;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=3590623,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226292.1;locus_tag=PHA56_RS17145;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP116214.1 RefSeq gene 3590686 3591321 . + . ID=gene-PHA56_RS17150;Name=PHA56_RS17150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS17150;old_locus_tag=PHA56_17150 NZ_CP116214.1 Protein Homology CDS 3590686 3591321 . + 0 ID=cds-WP_004849937.1;Parent=gene-PHA56_RS17150;Dbxref=Genbank:WP_004849937.1;Name=WP_004849937.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004849937.1;locus_tag=PHA56_RS17150;product=TetR/AcrR family transcriptional regulator;protein_id=WP_004849937.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3591692 3593869 . + . ID=gene-PHA56_RS17155;Name=PHA56_RS17155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS17155;old_locus_tag=PHA56_17155 NZ_CP116214.1 Protein Homology CDS 3591692 3593869 . + 0 ID=cds-WP_042944896.1;Parent=gene-PHA56_RS17155;Dbxref=Genbank:WP_042944896.1;Name=WP_042944896.1;Ontology_term=GO:0015891,GO:0015343,GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;go_function=siderophore-iron transmembrane transporter activity|0015343||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226287.1;locus_tag=PHA56_RS17155;product=TonB-dependent siderophore receptor;protein_id=WP_042944896.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3593925 3594464 . - . ID=gene-PHA56_RS17160;Name=PHA56_RS17160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS17160;old_locus_tag=PHA56_17160 NZ_CP116214.1 Protein Homology CDS 3593925 3594464 . - 0 ID=cds-WP_004131424.1;Parent=gene-PHA56_RS17160;Dbxref=Genbank:WP_004131424.1;Name=WP_004131424.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460182.1;locus_tag=PHA56_RS17160;product=glycine zipper 2TM domain-containing protein;protein_id=WP_004131424.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3594690 3595994 . - . ID=gene-PHA56_RS17165;Name=PHA56_RS17165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS17165;old_locus_tag=PHA56_17165 NZ_CP116214.1 Protein Homology CDS 3594690 3595994 . - 0 ID=cds-WP_004849932.1;Parent=gene-PHA56_RS17165;Dbxref=Genbank:WP_004849932.1;Name=WP_004849932.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384716.1;locus_tag=PHA56_RS17165;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_004849932.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3596230 3596772 . - . ID=gene-PHA56_RS17170;Name=ycfP;gbkey=Gene;gene=ycfP;gene_biotype=protein_coding;locus_tag=PHA56_RS17170;old_locus_tag=PHA56_17170 NZ_CP116214.1 Protein Homology CDS 3596230 3596772 . - 0 ID=cds-WP_004849931.1;Parent=gene-PHA56_RS17170;Dbxref=Genbank:WP_004849931.1;Name=WP_004849931.1;gbkey=CDS;gene=ycfP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126033.1;locus_tag=PHA56_RS17170;product=alpha/beta hydrolase YcfP;protein_id=WP_004849931.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3596809 3597819 . - . ID=gene-PHA56_RS17175;Name=nagZ;gbkey=Gene;gene=nagZ;gene_biotype=protein_coding;locus_tag=PHA56_RS17175;old_locus_tag=PHA56_17175 NZ_CP116214.1 Protein Homology CDS 3596809 3597819 . - 0 ID=cds-WP_029946910.1;Parent=gene-PHA56_RS17175;Dbxref=Genbank:WP_029946910.1;Name=WP_029946910.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=nagZ;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226283.1;locus_tag=PHA56_RS17175;product=beta-N-acetylhexosaminidase;protein_id=WP_029946910.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3597851 3598669 . - . ID=gene-PHA56_RS17180;Name=thiK;gbkey=Gene;gene=thiK;gene_biotype=protein_coding;locus_tag=PHA56_RS17180;old_locus_tag=PHA56_17180 NZ_CP116214.1 Protein Homology CDS 3597851 3598669 . - 0 ID=cds-WP_014228848.1;Parent=gene-PHA56_RS17180;Dbxref=Genbank:WP_014228848.1;Name=WP_014228848.1;Ontology_term=GO:0006772,GO:0016310,GO:0019165;gbkey=CDS;gene=thiK;go_function=thiamine kinase activity|0019165||IEA;go_process=thiamine metabolic process|0006772||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016807627.1;locus_tag=PHA56_RS17180;product=thiamine kinase;protein_id=WP_014228848.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3598650 3599285 . - . ID=gene-PHA56_RS17185;Name=lpoB;gbkey=Gene;gene=lpoB;gene_biotype=protein_coding;locus_tag=PHA56_RS17185;old_locus_tag=PHA56_17185 NZ_CP116214.1 Protein Homology CDS 3598650 3599285 . - 0 ID=cds-WP_014228847.1;Parent=gene-PHA56_RS17185;Dbxref=Genbank:WP_014228847.1;Name=WP_014228847.1;gbkey=CDS;gene=lpoB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004140668.1;locus_tag=PHA56_RS17185;product=penicillin-binding protein activator LpoB;protein_id=WP_014228847.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3599298 3599672 . - . ID=gene-PHA56_RS17190;Name=PHA56_RS17190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS17190;old_locus_tag=PHA56_17190 NZ_CP116214.1 Protein Homology CDS 3599298 3599672 . - 0 ID=cds-WP_014228846.1;Parent=gene-PHA56_RS17190;Dbxref=Genbank:WP_014228846.1;Name=WP_014228846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001225268.1;locus_tag=PHA56_RS17190;product=YcfL family protein;protein_id=WP_014228846.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3599678 3600034 . - . ID=gene-PHA56_RS17195;Name=hinT;gbkey=Gene;gene=hinT;gene_biotype=protein_coding;locus_tag=PHA56_RS17195;old_locus_tag=PHA56_17195 NZ_CP116214.1 Protein Homology CDS 3599678 3600034 . - 0 ID=cds-WP_004849924.1;Parent=gene-PHA56_RS17195;Dbxref=Genbank:WP_004849924.1;Name=WP_004849924.1;gbkey=CDS;gene=hinT;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226279.1;locus_tag=PHA56_RS17195;product=purine nucleoside phosphoramidase;protein_id=WP_004849924.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3600388 3602571 . + . ID=gene-PHA56_RS17200;Name=fhuE;gbkey=Gene;gene=fhuE;gene_biotype=protein_coding;locus_tag=PHA56_RS17200;old_locus_tag=PHA56_17200 NZ_CP116214.1 Protein Homology CDS 3600388 3602571 . + 0 ID=cds-WP_038424318.1;Parent=gene-PHA56_RS17200;Dbxref=Genbank:WP_038424318.1;Name=WP_038424318.1;Ontology_term=GO:0015891,GO:0015344,GO:0038023,GO:0009279;gbkey=CDS;gene=fhuE;go_component=cell outer membrane|0009279||IEA;go_function=siderophore uptake transmembrane transporter activity|0015344||IEA,signaling receptor activity|0038023||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004101103.1;locus_tag=PHA56_RS17200;product=ferric-rhodotorulic acid/ferric-coprogen receptor FhuE;protein_id=WP_038424318.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3602672 3604105 . - . ID=gene-PHA56_RS17205;Name=ptsG;gbkey=Gene;gene=ptsG;gene_biotype=protein_coding;locus_tag=PHA56_RS17205;old_locus_tag=PHA56_17205 NZ_CP116214.1 Protein Homology CDS 3602672 3604105 . - 0 ID=cds-WP_014228844.1;Parent=gene-PHA56_RS17205;Dbxref=Genbank:WP_014228844.1;Name=WP_014228844.1;Ontology_term=GO:0009401,GO:1904659,GO:0005355,GO:0008982;gbkey=CDS;gene=ptsG;go_function=glucose transmembrane transporter activity|0005355||IEA,protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,glucose transmembrane transport|1904659||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226278.1;locus_tag=PHA56_RS17205;product=PTS glucose transporter subunit IIBC;protein_id=WP_014228844.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3604403 3605197 . - . ID=gene-PHA56_RS17210;Name=PHA56_RS17210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS17210;old_locus_tag=PHA56_17210 NZ_CP116214.1 Protein Homology CDS 3604403 3605197 . - 0 ID=cds-WP_004849918.1;Parent=gene-PHA56_RS17210;Dbxref=Genbank:WP_004849918.1;Name=WP_004849918.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014169581.1;locus_tag=PHA56_RS17210;product=metal-dependent hydrolase;protein_id=WP_004849918.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3605208 3606212 . - . ID=gene-PHA56_RS17215;Name=holB;gbkey=Gene;gene=holB;gene_biotype=protein_coding;locus_tag=PHA56_RS17215;old_locus_tag=PHA56_17215 NZ_CP116214.1 Protein Homology CDS 3605208 3606212 . - 0 ID=cds-WP_014228843.1;Parent=gene-PHA56_RS17215;Dbxref=Genbank:WP_014228843.1;Name=WP_014228843.1;Ontology_term=GO:0006260,GO:0003887,GO:0008408;gbkey=CDS;gene=holB;go_function=DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226276.1;locus_tag=PHA56_RS17215;product=DNA polymerase III subunit delta';protein_id=WP_014228843.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3606209 3606850 . - . ID=gene-PHA56_RS17220;Name=tmk;gbkey=Gene;gene=tmk;gene_biotype=protein_coding;locus_tag=PHA56_RS17220;old_locus_tag=PHA56_17220 NZ_CP116214.1 Protein Homology CDS 3606209 3606850 . - 0 ID=cds-WP_004849914.1;Parent=gene-PHA56_RS17220;Dbxref=Genbank:WP_004849914.1;Name=WP_004849914.1;Ontology_term=GO:0015949,GO:0004798;gbkey=CDS;gene=tmk;go_function=thymidylate kinase activity|0004798||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004849914.1;locus_tag=PHA56_RS17220;product=dTMP kinase;protein_id=WP_004849914.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3606840 3607862 . - . ID=gene-PHA56_RS17225;Name=yceG;gbkey=Gene;gene=yceG;gene_biotype=protein_coding;locus_tag=PHA56_RS17225;old_locus_tag=PHA56_17225 NZ_CP116214.1 Protein Homology CDS 3606840 3607862 . - 0 ID=cds-WP_038424316.1;Parent=gene-PHA56_RS17225;Dbxref=Genbank:WP_038424316.1;Name=WP_038424316.1;gbkey=CDS;gene=yceG;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226274.1;locus_tag=PHA56_RS17225;product=cell division protein YceG;protein_id=WP_038424316.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3607865 3608674 . - . ID=gene-PHA56_RS17230;Name=pabC;gbkey=Gene;gene=pabC;gene_biotype=protein_coding;locus_tag=PHA56_RS17230;old_locus_tag=PHA56_17230 NZ_CP116214.1 Protein Homology CDS 3607865 3608674 . - 0 ID=cds-WP_014838091.1;Parent=gene-PHA56_RS17230;Dbxref=Genbank:WP_014838091.1;Name=WP_014838091.1;Ontology_term=GO:0046656,GO:0008696,GO:0030170;gbkey=CDS;gene=pabC;go_function=4-amino-4-deoxychorismate lyase activity|0008696||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=folic acid biosynthetic process|0046656||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004849910.1;locus_tag=PHA56_RS17230;product=aminodeoxychorismate lyase;protein_id=WP_014838091.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3608820 3610061 . - . ID=gene-PHA56_RS17235;Name=fabF;gbkey=Gene;gene=fabF;gene_biotype=protein_coding;locus_tag=PHA56_RS17235;old_locus_tag=PHA56_17235 NZ_CP116214.1 Protein Homology CDS 3608820 3610061 . - 0 ID=cds-WP_071886325.1;Parent=gene-PHA56_RS17235;Dbxref=Genbank:WP_071886325.1;Name=WP_071886325.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabF;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460167.1;locus_tag=PHA56_RS17235;product=beta-ketoacyl-ACP synthase II;protein_id=WP_071886325.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3610151 3610387 . - . ID=gene-PHA56_RS17240;Name=acpP;gbkey=Gene;gene=acpP;gene_biotype=protein_coding;locus_tag=PHA56_RS17240;old_locus_tag=PHA56_17240 NZ_CP116214.1 Protein Homology CDS 3610151 3610387 . - 0 ID=cds-WP_000103754.1;Parent=gene-PHA56_RS17240;Dbxref=Genbank:WP_000103754.1;Name=WP_000103754.1;Ontology_term=GO:0006633;gbkey=CDS;gene=acpP;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016535861.1;locus_tag=PHA56_RS17240;product=acyl carrier protein;protein_id=WP_000103754.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3610598 3611332 . - . ID=gene-PHA56_RS17245;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=PHA56_RS17245;old_locus_tag=PHA56_17245 NZ_CP116214.1 Protein Homology CDS 3610598 3611332 . - 0 ID=cds-WP_004131399.1;Parent=gene-PHA56_RS17245;Dbxref=Genbank:WP_004131399.1;Name=WP_004131399.1;Ontology_term=GO:0006633,GO:0004316,GO:0051287;gbkey=CDS;gene=fabG;go_function=3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity|0004316||IEA,NAD binding|0051287||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129017.1;locus_tag=PHA56_RS17245;product=3-oxoacyl-ACP reductase FabG;protein_id=WP_004131399.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3611345 3612274 . - . ID=gene-PHA56_RS17250;Name=fabD;gbkey=Gene;gene=fabD;gene_biotype=protein_coding;locus_tag=PHA56_RS17250;old_locus_tag=PHA56_17250 NZ_CP116214.1 Protein Homology CDS 3611345 3612274 . - 0 ID=cds-WP_189087252.1;Parent=gene-PHA56_RS17250;Dbxref=Genbank:WP_189087252.1;Name=WP_189087252.1;Ontology_term=GO:0006633,GO:0004314;gbkey=CDS;gene=fabD;go_function=[acyl-carrier-protein] S-malonyltransferase activity|0004314||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226269.1;locus_tag=PHA56_RS17250;product=ACP S-malonyltransferase;protein_id=WP_189087252.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3612290 3613243 . - . ID=gene-PHA56_RS17255;Name=PHA56_RS17255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS17255;old_locus_tag=PHA56_17255 NZ_CP116214.1 Protein Homology CDS 3612290 3613243 . - 0 ID=cds-WP_038424315.1;Parent=gene-PHA56_RS17255;Dbxref=Genbank:WP_038424315.1;Name=WP_038424315.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129019.1;locus_tag=PHA56_RS17255;product=ketoacyl-ACP synthase III;protein_id=WP_038424315.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3613297 3614394 . - . ID=gene-PHA56_RS17260;Name=plsX;gbkey=Gene;gene=plsX;gene_biotype=protein_coding;locus_tag=PHA56_RS17260;old_locus_tag=PHA56_17260 NZ_CP116214.1 Protein Homology CDS 3613297 3614394 . - 0 ID=cds-WP_071846169.1;Parent=gene-PHA56_RS17260;Dbxref=Genbank:WP_071846169.1;Name=WP_071846169.1;Ontology_term=GO:0008610,GO:0043811;gbkey=CDS;gene=plsX;go_function=phosphate:acyl-[acyl carrier protein] acyltransferase activity|0043811||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415608.2;locus_tag=PHA56_RS17260;product=phosphate acyltransferase PlsX;protein_id=WP_071846169.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3614597 3614770 . - . ID=gene-PHA56_RS17265;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=PHA56_RS17265;old_locus_tag=PHA56_17265 NZ_CP116214.1 Protein Homology CDS 3614597 3614770 . - 0 ID=cds-WP_004101077.1;Parent=gene-PHA56_RS17265;Dbxref=Genbank:WP_004101077.1;Name=WP_004101077.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmF;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125993.1;locus_tag=PHA56_RS17265;product=50S ribosomal protein L32;protein_id=WP_004101077.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3614787 3615308 . - . ID=gene-PHA56_RS17270;Name=yceD;gbkey=Gene;gene=yceD;gene_biotype=protein_coding;locus_tag=PHA56_RS17270;old_locus_tag=PHA56_17270 NZ_CP116214.1 Protein Homology CDS 3614787 3615308 . - 0 ID=cds-WP_004849895.1;Parent=gene-PHA56_RS17270;Dbxref=Genbank:WP_004849895.1;Name=WP_004849895.1;gbkey=CDS;gene=yceD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001174481.1;locus_tag=PHA56_RS17270;product=23S rRNA accumulation protein YceD;protein_id=WP_004849895.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3615450 3616034 . + . ID=gene-PHA56_RS17275;Name=PHA56_RS17275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS17275;old_locus_tag=PHA56_17275 NZ_CP116214.1 Protein Homology CDS 3615450 3616034 . + 0 ID=cds-WP_014838086.1;Parent=gene-PHA56_RS17275;Dbxref=Genbank:WP_014838086.1;Name=WP_014838086.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004101073.1;locus_tag=PHA56_RS17275;product=Maf family protein;protein_id=WP_014838086.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3616234 3617379 . + . ID=gene-PHA56_RS17280;Name=PHA56_RS17280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS17280;old_locus_tag=PHA56_17280 NZ_CP116214.1 Protein Homology CDS 3616234 3617379 . + 0 ID=cds-WP_038424314.1;Parent=gene-PHA56_RS17280;Dbxref=Genbank:WP_038424314.1;Name=WP_038424314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009653402.1;locus_tag=PHA56_RS17280;product=alpha/beta fold hydrolase;protein_id=WP_038424314.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3617392 3618345 . - . ID=gene-PHA56_RS17285;Name=rluC;gbkey=Gene;gene=rluC;gene_biotype=protein_coding;locus_tag=PHA56_RS17285;old_locus_tag=PHA56_17285 NZ_CP116214.1 Protein Homology CDS 3617392 3618345 . - 0 ID=cds-WP_189087254.1;Parent=gene-PHA56_RS17285;Dbxref=Genbank:WP_189087254.1;Name=WP_189087254.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=rluC;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460157.1;locus_tag=PHA56_RS17285;product=23S rRNA pseudouridine(955/2504/2580) synthase RluC;protein_id=WP_189087254.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3619046 3622300 . + . ID=gene-PHA56_RS17290;Name=rne;gbkey=Gene;gene=rne;gene_biotype=protein_coding;locus_tag=PHA56_RS17290;old_locus_tag=PHA56_17290 NZ_CP116214.1 Protein Homology CDS 3619046 3622300 . + 0 ID=cds-WP_014228835.1;Parent=gene-PHA56_RS17290;Dbxref=Genbank:WP_014228835.1;Name=WP_014228835.1;Ontology_term=GO:0006396,GO:0003723,GO:0008995;gbkey=CDS;gene=rne;go_function=RNA binding|0003723||IEA,ribonuclease E activity|0008995||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004152941.1;locus_tag=PHA56_RS17290;product=ribonuclease E;protein_id=WP_014228835.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3622340 3623275 . - . ID=gene-PHA56_RS17295;Name=PHA56_RS17295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS17295;old_locus_tag=PHA56_17295 NZ_CP116214.1 Protein Homology CDS 3622340 3623275 . - 0 ID=cds-WP_004849886.1;Parent=gene-PHA56_RS17295;Dbxref=Genbank:WP_004849886.1;Name=WP_004849886.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012905433.1;locus_tag=PHA56_RS17295;product=LysR family transcriptional regulator;protein_id=WP_004849886.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3623385 3624599 . + . ID=gene-PHA56_RS17300;Name=PHA56_RS17300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS17300;old_locus_tag=PHA56_17300 NZ_CP116214.1 Protein Homology CDS 3623385 3624599 . + 0 ID=cds-WP_014228834.1;Parent=gene-PHA56_RS17300;Dbxref=Genbank:WP_014228834.1;Name=WP_014228834.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004101059.1;locus_tag=PHA56_RS17300;product=MFS transporter;protein_id=WP_014228834.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3624671 3626206 . - . ID=gene-PHA56_RS17305;Name=murJ;gbkey=Gene;gene=murJ;gene_biotype=protein_coding;locus_tag=PHA56_RS17305;old_locus_tag=PHA56_17305 NZ_CP116214.1 Protein Homology CDS 3624671 3626206 . - 0 ID=cds-WP_004849883.1;Parent=gene-PHA56_RS17305;Dbxref=Genbank:WP_004849883.1;Name=WP_004849883.1;Ontology_term=GO:0009252,GO:0034204;gbkey=CDS;gene=murJ;go_process=peptidoglycan biosynthetic process|0009252||IEA,lipid translocation|0034204||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706990.2;locus_tag=PHA56_RS17305;product=murein biosynthesis integral membrane protein MurJ;protein_id=WP_004849883.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3626319 3627242 . - . ID=gene-PHA56_RS17310;Name=PHA56_RS17310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS17310;old_locus_tag=PHA56_17310 NZ_CP116214.1 Protein Homology CDS 3626319 3627242 . - 0 ID=cds-WP_014228832.1;Parent=gene-PHA56_RS17310;Dbxref=Genbank:WP_014228832.1;Name=WP_014228832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017900737.1;locus_tag=PHA56_RS17310;product=Gfo/Idh/MocA family oxidoreductase;protein_id=WP_014228832.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3627245 3627892 . - . ID=gene-PHA56_RS17315;Name=PHA56_RS17315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS17315;old_locus_tag=PHA56_17315 NZ_CP116214.1 Protein Homology CDS 3627245 3627892 . - 0 ID=cds-WP_014228831.1;Parent=gene-PHA56_RS17315;Dbxref=Genbank:WP_014228831.1;Name=WP_014228831.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226256.1;locus_tag=PHA56_RS17315;product=YceH family protein;protein_id=WP_014228831.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3627902 3628486 . - . ID=gene-PHA56_RS17320;Name=rimJ;gbkey=Gene;gene=rimJ;gene_biotype=protein_coding;locus_tag=PHA56_RS17320;old_locus_tag=PHA56_17320 NZ_CP116214.1 Protein Homology CDS 3627902 3628486 . - 0 ID=cds-WP_004131378.1;Parent=gene-PHA56_RS17320;Dbxref=Genbank:WP_004131378.1;Name=WP_004131378.1;Ontology_term=GO:0008080;gbkey=CDS;gene=rimJ;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309471.1;locus_tag=PHA56_RS17320;product=ribosomal protein S5-alanine N-acetyltransferase;protein_id=WP_004131378.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3628716 3629924 . + . ID=gene-PHA56_RS17325;Name=mdtH;gbkey=Gene;gene=mdtH;gene_biotype=protein_coding;locus_tag=PHA56_RS17325;old_locus_tag=PHA56_17325 NZ_CP116214.1 Protein Homology CDS 3628716 3629924 . + 0 ID=cds-WP_004849878.1;Parent=gene-PHA56_RS17325;Dbxref=Genbank:WP_004849878.1;Name=WP_004849878.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=mdtH;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226254.1;locus_tag=PHA56_RS17325;product=multidrug efflux MFS transporter MdtH;protein_id=WP_004849878.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3629990 3630637 . + . ID=gene-PHA56_RS17330;Name=grxB;gbkey=Gene;gene=grxB;gene_biotype=protein_coding;locus_tag=PHA56_RS17330;old_locus_tag=PHA56_17330 NZ_CP116214.1 Protein Homology CDS 3629990 3630637 . + 0 ID=cds-WP_014228830.1;Parent=gene-PHA56_RS17330;Dbxref=Genbank:WP_014228830.1;Name=WP_014228830.1;Ontology_term=GO:0006749,GO:0004362,GO:0005515;gbkey=CDS;gene=grxB;go_function=glutathione-disulfide reductase (NADPH) activity|0004362||IEA,protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309469.1;locus_tag=PHA56_RS17330;product=glutaredoxin 2;protein_id=WP_014228830.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3630773 3631333 . + . ID=gene-PHA56_RS17335;Name=PHA56_RS17335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS17335;old_locus_tag=PHA56_17335 NZ_CP116214.1 Protein Homology CDS 3630773 3631333 . + 0 ID=cds-WP_004849873.1;Parent=gene-PHA56_RS17335;Dbxref=Genbank:WP_004849873.1;Name=WP_004849873.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226253.1;locus_tag=PHA56_RS17335;product=lipoprotein;protein_id=WP_004849873.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3631456 3632502 . + . ID=gene-PHA56_RS17340;Name=pyrC;gbkey=Gene;gene=pyrC;gene_biotype=protein_coding;locus_tag=PHA56_RS17340;old_locus_tag=PHA56_17340 NZ_CP116214.1 Protein Homology CDS 3631456 3632502 . + 0 ID=cds-WP_014838079.1;Parent=gene-PHA56_RS17340;Dbxref=Genbank:WP_014838079.1;Name=WP_014838079.1;Ontology_term=GO:0009220,GO:0004151;gbkey=CDS;gene=pyrC;go_function=dihydroorotase activity|0004151||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415580.1;locus_tag=PHA56_RS17340;product=dihydroorotase;protein_id=WP_014838079.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3632575 3632820 . + . ID=gene-PHA56_RS17345;Name=dinI;gbkey=Gene;gene=dinI;gene_biotype=protein_coding;locus_tag=PHA56_RS17345;old_locus_tag=PHA56_17345 NZ_CP116214.1 Protein Homology CDS 3632575 3632820 . + 0 ID=cds-WP_004101040.1;Parent=gene-PHA56_RS17345;Dbxref=Genbank:WP_004101040.1;Name=WP_004101040.1;gbkey=CDS;gene=dinI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004101040.1;locus_tag=PHA56_RS17345;product=DNA damage-inducible protein I;protein_id=WP_004101040.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3633107 3633361 . + . ID=gene-PHA56_RS17350;Name=bssS;gbkey=Gene;gene=bssS;gene_biotype=protein_coding;locus_tag=PHA56_RS17350;old_locus_tag=PHA56_17350 NZ_CP116214.1 Protein Homology CDS 3633107 3633361 . + 0 ID=cds-WP_004101039.1;Parent=gene-PHA56_RS17350;Dbxref=Genbank:WP_004101039.1;Name=WP_004101039.1;gbkey=CDS;gene=bssS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226249.1;locus_tag=PHA56_RS17350;product=biofilm formation regulator BssS;protein_id=WP_004101039.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3633486 3634604 . + . ID=gene-PHA56_RS17355;Name=solA;gbkey=Gene;gene=solA;gene_biotype=protein_coding;locus_tag=PHA56_RS17355;old_locus_tag=PHA56_17355 NZ_CP116214.1 Protein Homology CDS 3633486 3634604 . + 0 ID=cds-WP_014838078.1;Parent=gene-PHA56_RS17355;Dbxref=Genbank:WP_014838078.1;Name=WP_014838078.1;Ontology_term=GO:0050131;gbkey=CDS;gene=solA;go_function=N-methyl-L-amino-acid oxidase activity|0050131||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014228828.1;locus_tag=PHA56_RS17355;product=N-methyl-L-tryptophan oxidase;protein_id=WP_014838078.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3634678 3634791 . + . ID=gene-PHA56_RS17360;Name=PHA56_RS17360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS17360;old_locus_tag=PHA56_17360 NZ_CP116214.1 Protein Homology CDS 3634678 3634791 . + 0 ID=cds-WP_004101037.1;Parent=gene-PHA56_RS17360;Dbxref=Genbank:WP_004101037.1;Name=WP_004101037.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226247.1;locus_tag=PHA56_RS17360;product=YceO family protein;protein_id=WP_004101037.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3634777 3635841 . - . ID=gene-PHA56_RS17365;Name=PHA56_RS17365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS17365;old_locus_tag=PHA56_17365 NZ_CP116214.1 Protein Homology CDS 3634777 3635841 . - 0 ID=cds-WP_032692823.1;Parent=gene-PHA56_RS17365;Dbxref=Genbank:WP_032692823.1;Name=WP_032692823.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226246.1;locus_tag=PHA56_RS17365;product=rhodanese-related sulfurtransferase;protein_id=WP_032692823.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3636051 3636971 . + . ID=gene-PHA56_RS17370;Name=PHA56_RS17370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS17370;old_locus_tag=PHA56_17370 NZ_CP116214.1 Protein Homology CDS 3636051 3636971 . + 0 ID=cds-WP_004849864.1;Parent=gene-PHA56_RS17370;Dbxref=Genbank:WP_004849864.1;Name=WP_004849864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226244.1;locus_tag=PHA56_RS17370;product=LpxL/LpxP family Kdo(2)-lipid IV(A) lauroyl/palmitoleoyl acyltransferasee;protein_id=WP_004849864.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3637158 3638408 . + . ID=gene-PHA56_RS17375;Name=mdtG;gbkey=Gene;gene=mdtG;gene_biotype=protein_coding;locus_tag=PHA56_RS17375;old_locus_tag=PHA56_17375 NZ_CP116214.1 Protein Homology CDS 3637158 3638408 . + 0 ID=cds-WP_014228827.1;Parent=gene-PHA56_RS17375;Dbxref=Genbank:WP_014228827.1;Name=WP_014228827.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=mdtG;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015705027.1;locus_tag=PHA56_RS17375;product=multidrug efflux MFS transporter MdtG;protein_id=WP_014228827.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3638500 3638886 . + . ID=gene-PHA56_RS17380;Name=PHA56_RS17380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS17380;old_locus_tag=PHA56_17380 NZ_CP116214.1 Protein Homology CDS 3638500 3638886 . + 0 ID=cds-WP_004137236.1;Parent=gene-PHA56_RS17380;Dbxref=Genbank:WP_004137236.1;Name=WP_004137236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226242.1;locus_tag=PHA56_RS17380;product=MysB family protein;protein_id=WP_004137236.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3638887 3639114 . - . ID=gene-PHA56_RS17385;Name=PHA56_RS17385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS17385;old_locus_tag=PHA56_17385 NZ_CP116214.1 Protein Homology CDS 3638887 3639114 . - 0 ID=cds-WP_004849859.1;Parent=gene-PHA56_RS17385;Dbxref=Genbank:WP_004849859.1;Name=WP_004849859.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226241.1;locus_tag=PHA56_RS17385;product=YceK/YidQ family lipoprotein;protein_id=WP_004849859.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3639181 3641709 . - . ID=gene-PHA56_RS17390;Name=mdoH;gbkey=Gene;gene=mdoH;gene_biotype=protein_coding;locus_tag=PHA56_RS17390;old_locus_tag=PHA56_17390 NZ_CP116214.1 Protein Homology CDS 3639181 3641709 . - 0 ID=cds-WP_014228826.1;Parent=gene-PHA56_RS17390;Dbxref=Genbank:WP_014228826.1;Name=WP_014228826.1;Ontology_term=GO:0016758;gbkey=CDS;gene=mdoH;go_function=hexosyltransferase activity|0016758||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226240.1;locus_tag=PHA56_RS17390;product=glucans biosynthesis glucosyltransferase MdoH;protein_id=WP_014228826.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3641702 3643255 . - . ID=gene-PHA56_RS17395;Name=mdoG;gbkey=Gene;gene=mdoG;gene_biotype=protein_coding;locus_tag=PHA56_RS17395;old_locus_tag=PHA56_17395 NZ_CP116214.1 Protein Homology CDS 3641702 3643255 . - 0 ID=cds-WP_004101027.1;Parent=gene-PHA56_RS17395;Dbxref=Genbank:WP_004101027.1;Name=WP_004101027.1;gbkey=CDS;gene=mdoG;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226239.1;locus_tag=PHA56_RS17395;product=glucans biosynthesis protein MdoG;protein_id=WP_004101027.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3643507 3644667 . + . ID=gene-PHA56_RS17400;Name=mdoC;gbkey=Gene;gene=mdoC;gene_biotype=protein_coding;locus_tag=PHA56_RS17400;old_locus_tag=PHA56_17400 NZ_CP116214.1 Protein Homology CDS 3643507 3644667 . + 0 ID=cds-WP_004849851.1;Parent=gene-PHA56_RS17400;Dbxref=Genbank:WP_004849851.1;Name=WP_004849851.1;Ontology_term=GO:0016740;gbkey=CDS;gene=mdoC;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014228824.1;locus_tag=PHA56_RS17400;product=glucans biosynthesis protein MdoC;protein_id=WP_004849851.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3644704 3645294 . - . ID=gene-PHA56_RS17405;Name=PHA56_RS17405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS17405;old_locus_tag=PHA56_17405 NZ_CP116214.1 Protein Homology CDS 3644704 3645294 . - 0 ID=cds-WP_004849849.1;Parent=gene-PHA56_RS17405;Dbxref=Genbank:WP_004849849.1;Name=WP_004849849.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016807604.1;locus_tag=PHA56_RS17405;product=TetR/AcrR family transcriptional regulator;protein_id=WP_004849849.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3645341 3645895 . - . ID=gene-PHA56_RS17410;Name=ymdB;gbkey=Gene;gene=ymdB;gene_biotype=protein_coding;locus_tag=PHA56_RS17410;old_locus_tag=PHA56_17410 NZ_CP116214.1 Protein Homology CDS 3645341 3645895 . - 0 ID=cds-WP_038424313.1;Parent=gene-PHA56_RS17410;Dbxref=Genbank:WP_038424313.1;Name=WP_038424313.1;Ontology_term=GO:0003824;gbkey=CDS;gene=ymdB;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014228822.1;locus_tag=PHA56_RS17410;product=O-acetyl-ADP-ribose deacetylase;protein_id=WP_038424313.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3645985 3646290 . - . ID=gene-PHA56_RS17415;Name=PHA56_RS17415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS17415;old_locus_tag=PHA56_17415 NZ_CP116214.1 Protein Homology CDS 3645985 3646290 . - 0 ID=cds-WP_014228821.1;Parent=gene-PHA56_RS17415;Dbxref=Genbank:WP_014228821.1;Name=WP_014228821.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004849844.1;locus_tag=PHA56_RS17415;product=type 1 fimbrial protein;protein_id=WP_014228821.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3646581 3647072 . - . ID=gene-PHA56_RS17420;Name=PHA56_RS17420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS17420;old_locus_tag=PHA56_17420 NZ_CP116214.1 Protein Homology CDS 3646581 3647072 . - 0 ID=cds-WP_014228820.1;Parent=gene-PHA56_RS17420;Dbxref=Genbank:WP_014228820.1;Name=WP_014228820.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015584660.1;locus_tag=PHA56_RS17420;product=DUF1097 domain-containing protein;protein_id=WP_014228820.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3647176 3647730 . - . ID=gene-PHA56_RS17425;Name=PHA56_RS17425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS17425;old_locus_tag=PHA56_17425 NZ_CP116214.1 Protein Homology CDS 3647176 3647730 . - 0 ID=cds-WP_014228819.1;Parent=gene-PHA56_RS17425;Dbxref=Genbank:WP_014228819.1;Name=WP_014228819.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415553.1;locus_tag=PHA56_RS17425;product=molecular chaperone;protein_id=WP_014228819.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3647753 3648490 . - . ID=gene-PHA56_RS17430;Name=PHA56_RS17430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS17430;old_locus_tag=PHA56_17430 NZ_CP116214.1 Protein Homology CDS 3647753 3648490 . - 0 ID=cds-WP_025106900.1;Parent=gene-PHA56_RS17430;Dbxref=Genbank:WP_025106900.1;Name=WP_025106900.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226233.1;locus_tag=PHA56_RS17430;product=phosphatase;protein_id=WP_025106900.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3648576 3649514 . - . ID=gene-PHA56_RS17435;Name=ghrA;gbkey=Gene;gene=ghrA;gene_biotype=protein_coding;locus_tag=PHA56_RS17435;old_locus_tag=PHA56_17435 NZ_CP116214.1 Protein Homology CDS 3648576 3649514 . - 0 ID=cds-WP_014838073.1;Parent=gene-PHA56_RS17435;Dbxref=Genbank:WP_014838073.1;Name=WP_014838073.1;Ontology_term=GO:0016618,GO:0030267,GO:0051287;gbkey=CDS;gene=ghrA;go_function=hydroxypyruvate reductase activity|0016618||IEA,glyoxylate reductase (NADP+) activity|0030267||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226232.1;locus_tag=PHA56_RS17435;product=glyoxylate/hydroxypyruvate reductase GhrA;protein_id=WP_014838073.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3649783 3649870 . + . ID=gene-PHA56_RS17440;Name=PHA56_RS17440;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA56_RS17440;old_locus_tag=PHA56_17440 NZ_CP116214.1 tRNAscan-SE tRNA 3649783 3649870 . + . ID=rna-PHA56_RS17440;Parent=gene-PHA56_RS17440;anticodon=(pos:3649817..3649819);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS17440;product=tRNA-Ser NZ_CP116214.1 tRNAscan-SE exon 3649783 3649870 . + . ID=exon-PHA56_RS17440-1;Parent=rna-PHA56_RS17440;anticodon=(pos:3649817..3649819);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS17440;product=tRNA-Ser NZ_CP116214.1 RefSeq gene 3650468 3651373 . - . ID=gene-PHA56_RS17445;Name=PHA56_RS17445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS17445;old_locus_tag=PHA56_17445 NZ_CP116214.1 Protein Homology CDS 3650468 3651373 . - 0 ID=cds-WP_014228816.1;Parent=gene-PHA56_RS17445;Dbxref=Genbank:WP_014228816.1;Name=WP_014228816.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226231.1;locus_tag=PHA56_RS17445;product=LysR family transcriptional regulator;protein_id=WP_014228816.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3651488 3652348 . + . ID=gene-PHA56_RS17450;Name=PHA56_RS17450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS17450;old_locus_tag=PHA56_17450 NZ_CP116214.1 Protein Homology CDS 3651488 3652348 . + 0 ID=cds-WP_014228815.1;Parent=gene-PHA56_RS17450;Dbxref=Genbank:WP_014228815.1;Name=WP_014228815.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226230.1;locus_tag=PHA56_RS17450;product=pirin family protein;protein_id=WP_014228815.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3652369 3653046 . + . ID=gene-PHA56_RS17455;Name=PHA56_RS17455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS17455;old_locus_tag=PHA56_17455 NZ_CP116214.1 Protein Homology CDS 3652369 3653046 . + 0 ID=cds-WP_014228814.1;Parent=gene-PHA56_RS17455;Dbxref=Genbank:WP_014228814.1;Name=WP_014228814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226229.1;locus_tag=PHA56_RS17455;product=isochorismatase family protein;protein_id=WP_014228814.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3653192 3653279 . + . ID=gene-PHA56_RS17460;Name=PHA56_RS17460;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA56_RS17460;old_locus_tag=PHA56_17460 NZ_CP116214.1 tRNAscan-SE tRNA 3653192 3653279 . + . ID=rna-PHA56_RS17460;Parent=gene-PHA56_RS17460;anticodon=(pos:3653226..3653228);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS17460;product=tRNA-Ser NZ_CP116214.1 tRNAscan-SE exon 3653192 3653279 . + . ID=exon-PHA56_RS17460-1;Parent=rna-PHA56_RS17460;anticodon=(pos:3653226..3653228);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS17460;product=tRNA-Ser NZ_CP116214.1 RefSeq gene 3653624 3656698 . - . ID=gene-PHA56_RS17465;Name=PHA56_RS17465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS17465;old_locus_tag=PHA56_17465 NZ_CP116214.1 Protein Homology CDS 3653624 3656698 . - 0 ID=cds-WP_119834467.1;Parent=gene-PHA56_RS17465;Dbxref=Genbank:WP_119834467.1;Name=WP_119834467.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004849830.1;locus_tag=PHA56_RS17465;product=efflux RND transporter permease subunit;protein_id=WP_119834467.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3656695 3657843 . - . ID=gene-PHA56_RS17470;Name=PHA56_RS17470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS17470;old_locus_tag=PHA56_17470 NZ_CP116214.1 Protein Homology CDS 3656695 3657843 . - 0 ID=cds-WP_047724104.1;Parent=gene-PHA56_RS17470;Dbxref=Genbank:WP_047724104.1;Name=WP_047724104.1;Ontology_term=GO:0006810,GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004871252.1;locus_tag=PHA56_RS17470;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_047724104.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3657922 3659118 . - . ID=gene-PHA56_RS17475;Name=PHA56_RS17475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS17475;old_locus_tag=PHA56_17475 NZ_CP116214.1 Protein Homology CDS 3657922 3659118 . - 0 ID=cds-WP_047724105.1;Parent=gene-PHA56_RS17475;Dbxref=Genbank:WP_047724105.1;Name=WP_047724105.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014838070.1;locus_tag=PHA56_RS17475;product=HAMP domain-containing sensor histidine kinase;protein_id=WP_047724105.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3659115 3659810 . - . ID=gene-PHA56_RS17480;Name=PHA56_RS17480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS17480;old_locus_tag=PHA56_17480 NZ_CP116214.1 Protein Homology CDS 3659115 3659810 . - 0 ID=cds-WP_047724106.1;Parent=gene-PHA56_RS17480;Dbxref=Genbank:WP_047724106.1;Name=WP_047724106.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013096847.1;locus_tag=PHA56_RS17480;product=response regulator;protein_id=WP_047724106.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3659933 3660721 . + . ID=gene-PHA56_RS17485;Name=PHA56_RS17485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS17485;old_locus_tag=PHA56_17485 NZ_CP116214.1 Protein Homology CDS 3659933 3660721 . + 0 ID=cds-WP_119834468.1;Parent=gene-PHA56_RS17485;Dbxref=Genbank:WP_119834468.1;Name=WP_119834468.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004849824.1;locus_tag=PHA56_RS17485;product=MipA/OmpV family protein;protein_id=WP_119834468.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3660837 3661130 . + . ID=gene-PHA56_RS17490;Name=PHA56_RS17490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS17490;old_locus_tag=PHA56_17490 NZ_CP116214.1 Protein Homology CDS 3660837 3661130 . + 0 ID=cds-WP_014838068.1;Parent=gene-PHA56_RS17490;Dbxref=Genbank:WP_014838068.1;Name=WP_014838068.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008806398.1;locus_tag=PHA56_RS17490;product=YciI family protein;protein_id=WP_014838068.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3661182 3661970 . - . ID=gene-PHA56_RS17495;Name=phoH;gbkey=Gene;gene=phoH;gene_biotype=protein_coding;locus_tag=PHA56_RS17495;old_locus_tag=PHA56_17495 NZ_CP116214.1 Protein Homology CDS 3661182 3661970 . - 0 ID=cds-WP_014228807.1;Parent=gene-PHA56_RS17495;Dbxref=Genbank:WP_014228807.1;Name=WP_014228807.1;gbkey=CDS;gene=phoH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004871266.1;locus_tag=PHA56_RS17495;product=phosphate starvation-inducible protein PhoH;protein_id=WP_014228807.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3662480 3663760 . - . ID=gene-PHA56_RS17500;Name=efeB;gbkey=Gene;gene=efeB;gene_biotype=protein_coding;locus_tag=PHA56_RS17500;old_locus_tag=PHA56_17500 NZ_CP116214.1 Protein Homology CDS 3662480 3663760 . - 0 ID=cds-WP_014228806.1;Parent=gene-PHA56_RS17500;Dbxref=Genbank:WP_014228806.1;Name=WP_014228806.1;Ontology_term=GO:0033212,GO:0004601,GO:0020037;gbkey=CDS;gene=efeB;go_function=peroxidase activity|0004601||IEA,heme binding|0020037||IEA;go_process=iron import into cell|0033212||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226225.1;locus_tag=PHA56_RS17500;product=iron uptake transporter deferrochelatase/peroxidase subunit;protein_id=WP_014228806.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3663765 3664892 . - . ID=gene-PHA56_RS17505;Name=PHA56_RS17505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS17505;old_locus_tag=PHA56_17505 NZ_CP116214.1 Protein Homology CDS 3663765 3664892 . - 0 ID=cds-WP_014838066.1;Parent=gene-PHA56_RS17505;Dbxref=Genbank:WP_014838066.1;Name=WP_014838066.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226224.1;locus_tag=PHA56_RS17505;product=iron uptake system protein EfeO;protein_id=WP_014838066.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3664945 3665775 . - . ID=gene-PHA56_RS17510;Name=PHA56_RS17510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS17510;old_locus_tag=PHA56_17510 NZ_CP116214.1 Protein Homology CDS 3664945 3665775 . - 0 ID=cds-WP_009653546.1;Parent=gene-PHA56_RS17510;Dbxref=Genbank:WP_009653546.1;Name=WP_009653546.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226223.1;locus_tag=PHA56_RS17510;product=FTR1 family protein;protein_id=WP_009653546.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3666049 3667233 . + . ID=gene-PHA56_RS17515;Name=PHA56_RS17515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS17515;old_locus_tag=PHA56_17515 NZ_CP116214.1 Protein Homology CDS 3666049 3667233 . + 0 ID=cds-WP_014228804.1;Parent=gene-PHA56_RS17515;Dbxref=Genbank:WP_014228804.1;Name=WP_014228804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016946978.1;locus_tag=PHA56_RS17515;product=nucleoside transporter C-terminal domain-containing protein;protein_id=WP_014228804.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3667335 3667769 . - . ID=gene-PHA56_RS17520;Name=PHA56_RS17520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS17520;old_locus_tag=PHA56_17520 NZ_CP116214.1 Protein Homology CDS 3667335 3667769 . - 0 ID=cds-WP_032749622.1;Parent=gene-PHA56_RS17520;Dbxref=Genbank:WP_032749622.1;Name=WP_032749622.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004204513.1;locus_tag=PHA56_RS17520;product=DUF3574 domain-containing protein;protein_id=WP_032749622.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3667882 3669390 . - . ID=gene-PHA56_RS17525;Name=putP;gbkey=Gene;gene=putP;gene_biotype=protein_coding;locus_tag=PHA56_RS17525;old_locus_tag=PHA56_17525 NZ_CP116214.1 Protein Homology CDS 3667882 3669390 . - 0 ID=cds-WP_014228802.1;Parent=gene-PHA56_RS17525;Dbxref=Genbank:WP_014228802.1;Name=WP_014228802.1;Ontology_term=GO:0006814,GO:0015824,GO:0055085,GO:0005298,GO:0031402,GO:0016020;gbkey=CDS;gene=putP;go_component=membrane|0016020||IEA;go_function=proline:sodium symporter activity|0005298||IEA,sodium ion binding|0031402||IEA;go_process=sodium ion transport|0006814||IEA,proline transport|0015824||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226219.1;locus_tag=PHA56_RS17525;product=sodium/proline symporter PutP;protein_id=WP_014228802.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3669818 3673780 . + . ID=gene-PHA56_RS17530;Name=putA;gbkey=Gene;gene=putA;gene_biotype=protein_coding;locus_tag=PHA56_RS17530;old_locus_tag=PHA56_17530 NZ_CP116214.1 Protein Homology CDS 3669818 3673780 . + 0 ID=cds-WP_119834469.1;Parent=gene-PHA56_RS17530;Dbxref=Genbank:WP_119834469.1;Name=WP_119834469.1;Ontology_term=GO:0006355,GO:0006561,GO:0003700,GO:0003842,GO:0004657,GO:0016620;gbkey=CDS;gene=putA;go_function=DNA-binding transcription factor activity|0003700||IEA,1-pyrroline-5-carboxylate dehydrogenase activity|0003842||IEA,proline dehydrogenase activity|0004657||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309287.1;locus_tag=PHA56_RS17530;product=trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase;protein_id=WP_119834469.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3673973 3674368 . + . ID=gene-PHA56_RS17535;Name=PHA56_RS17535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS17535;old_locus_tag=PHA56_17535 NZ_CP116214.1 Protein Homology CDS 3673973 3674368 . + 0 ID=cds-WP_119834470.1;Parent=gene-PHA56_RS17535;Dbxref=Genbank:WP_119834470.1;Name=WP_119834470.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226216.1;locus_tag=PHA56_RS17535;product=lysozyme inhibitor LprI family protein;protein_id=WP_119834470.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3674365 3675003 . - . ID=gene-PHA56_RS17540;Name=rutR;gbkey=Gene;gene=rutR;gene_biotype=protein_coding;locus_tag=PHA56_RS17540;old_locus_tag=PHA56_17540 NZ_CP116214.1 Protein Homology CDS 3674365 3675003 . - 0 ID=cds-WP_004849813.1;Parent=gene-PHA56_RS17540;Dbxref=Genbank:WP_004849813.1;Name=WP_004849813.1;Ontology_term=GO:0045892,GO:0003677;gbkey=CDS;gene=rutR;go_function=DNA binding|0003677||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226215.1;locus_tag=PHA56_RS17540;product=HTH-type transcriptional regulator RutR;protein_id=WP_004849813.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3675288 3676379 . + . ID=gene-PHA56_RS17545;Name=rutA;gbkey=Gene;gene=rutA;gene_biotype=protein_coding;locus_tag=PHA56_RS17545;old_locus_tag=PHA56_17545 NZ_CP116214.1 Protein Homology CDS 3675288 3676379 . + 0 ID=cds-WP_119834471.1;Parent=gene-PHA56_RS17545;Dbxref=Genbank:WP_119834471.1;Name=WP_119834471.1;Ontology_term=GO:0008150,GO:0010181,GO:0016491;gbkey=CDS;gene=rutA;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226214.1;locus_tag=PHA56_RS17545;product=pyrimidine utilization protein A;protein_id=WP_119834471.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3676379 3677089 . + . ID=gene-PHA56_RS17550;Name=rutB;gbkey=Gene;gene=rutB;gene_biotype=protein_coding;locus_tag=PHA56_RS17550;old_locus_tag=PHA56_17550 NZ_CP116214.1 Protein Homology CDS 3676379 3677089 . + 0 ID=cds-WP_004849808.1;Parent=gene-PHA56_RS17550;Dbxref=Genbank:WP_004849808.1;Name=WP_004849808.1;Ontology_term=GO:0016811;gbkey=CDS;gene=rutB;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in linear amides|0016811||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226213.1;locus_tag=PHA56_RS17550;product=pyrimidine utilization protein B;protein_id=WP_004849808.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3677082 3677474 . + . ID=gene-PHA56_RS17555;Name=rutC;gbkey=Gene;gene=rutC;gene_biotype=protein_coding;locus_tag=PHA56_RS17555;old_locus_tag=PHA56_17555 NZ_CP116214.1 Protein Homology CDS 3677082 3677474 . + 0 ID=cds-WP_004131297.1;Parent=gene-PHA56_RS17555;Dbxref=Genbank:WP_004131297.1;Name=WP_004131297.1;gbkey=CDS;gene=rutC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004871301.1;locus_tag=PHA56_RS17555;product=pyrimidine utilization protein C;protein_id=WP_004131297.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3677471 3678274 . + . ID=gene-PHA56_RS17560;Name=rutD;gbkey=Gene;gene=rutD;gene_biotype=protein_coding;locus_tag=PHA56_RS17560;old_locus_tag=PHA56_17560 NZ_CP116214.1 Protein Homology CDS 3677471 3678274 . + 0 ID=cds-WP_025106249.1;Parent=gene-PHA56_RS17560;Dbxref=Genbank:WP_025106249.1;Name=WP_025106249.1;Ontology_term=GO:0006212,GO:0016811;gbkey=CDS;gene=rutD;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in linear amides|0016811||IEA;go_process=uracil catabolic process|0006212||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004849805.1;locus_tag=PHA56_RS17560;product=pyrimidine utilization protein D;protein_id=WP_025106249.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3678271 3678861 . + . ID=gene-PHA56_RS17565;Name=PHA56_RS17565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS17565;old_locus_tag=PHA56_17565 NZ_CP116214.1 Protein Homology CDS 3678271 3678861 . + 0 ID=cds-WP_014228796.1;Parent=gene-PHA56_RS17565;Dbxref=Genbank:WP_014228796.1;Name=WP_014228796.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226209.1;locus_tag=PHA56_RS17565;product=malonic semialdehyde reductase;protein_id=WP_014228796.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3678871 3679365 . + . ID=gene-PHA56_RS17570;Name=rutF;gbkey=Gene;gene=rutF;gene_biotype=protein_coding;locus_tag=PHA56_RS17570;old_locus_tag=PHA56_17570 NZ_CP116214.1 Protein Homology CDS 3678871 3679365 . + 0 ID=cds-WP_119834472.1;Parent=gene-PHA56_RS17570;Dbxref=Genbank:WP_119834472.1;Name=WP_119834472.1;gbkey=CDS;gene=rutF;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226208.1;locus_tag=PHA56_RS17570;product=pyrimidine utilization flavin reductase protein F;protein_id=WP_119834472.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3679387 3680709 . + . ID=gene-PHA56_RS17575;Name=rutG;gbkey=Gene;gene=rutG;gene_biotype=protein_coding;locus_tag=PHA56_RS17575;old_locus_tag=PHA56_17575 NZ_CP116214.1 Protein Homology CDS 3679387 3680709 . + 0 ID=cds-WP_009653397.1;Parent=gene-PHA56_RS17575;Dbxref=Genbank:WP_009653397.1;Name=WP_009653397.1;Ontology_term=GO:0006864,GO:0015218,GO:0016020;gbkey=CDS;gene=rutG;go_component=membrane|0016020||IEA;go_function=pyrimidine nucleotide transmembrane transporter activity|0015218||IEA;go_process=pyrimidine nucleotide transport|0006864||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226207.1;locus_tag=PHA56_RS17575;product=pyrimidine utilization transport protein G;protein_id=WP_009653397.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3680945 3681118 . - . ID=gene-PHA56_RS17580;Name=PHA56_RS17580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS17580;old_locus_tag=PHA56_17580 NZ_CP116214.1 Protein Homology CDS 3680945 3681118 . - 0 ID=cds-WP_004131287.1;Parent=gene-PHA56_RS17580;Dbxref=Genbank:WP_004131287.1;Name=WP_004131287.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003036022.1;locus_tag=PHA56_RS17580;product=general stress protein;protein_id=WP_004131287.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3681493 3682089 . + . ID=gene-PHA56_RS17585;Name=wrbA;gbkey=Gene;gene=wrbA;gene_biotype=protein_coding;locus_tag=PHA56_RS17585;old_locus_tag=PHA56_17585 NZ_CP116214.1 Protein Homology CDS 3681493 3682089 . + 0 ID=cds-WP_004100968.1;Parent=gene-PHA56_RS17585;Dbxref=Genbank:WP_004100968.1;Name=WP_004100968.1;Ontology_term=GO:0003955,GO:0010181;gbkey=CDS;gene=wrbA;go_function=NAD(P)H dehydrogenase (quinone) activity|0003955||IEA,FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226204.1;locus_tag=PHA56_RS17585;product=NAD(P)H:quinone oxidoreductase;protein_id=WP_004100968.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3682110 3682337 . + . ID=gene-PHA56_RS17590;Name=PHA56_RS17590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS17590;old_locus_tag=PHA56_17590 NZ_CP116214.1 Protein Homology CDS 3682110 3682337 . + 0 ID=cds-WP_004849783.1;Parent=gene-PHA56_RS17590;Dbxref=Genbank:WP_004849783.1;Name=WP_004849783.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002898701.1;locus_tag=PHA56_RS17590;product=YccJ family protein;protein_id=WP_004849783.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3682477 3683724 . - . ID=gene-PHA56_RS17595;Name=agp;gbkey=Gene;gene=agp;gene_biotype=protein_coding;locus_tag=PHA56_RS17595;old_locus_tag=PHA56_17595 NZ_CP116214.1 Protein Homology CDS 3682477 3683724 . - 0 ID=cds-WP_014838058.1;Parent=gene-PHA56_RS17595;Dbxref=Genbank:WP_014838058.1;Name=WP_014838058.1;gbkey=CDS;gene=agp;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004191023.1;locus_tag=PHA56_RS17595;product=bifunctional glucose-1-phosphatase/inositol phosphatase;protein_id=WP_014838058.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3683864 3684088 . - . ID=gene-PHA56_RS17600;Name=PHA56_RS17600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS17600;old_locus_tag=PHA56_17600 NZ_CP116214.1 Protein Homology CDS 3683864 3684088 . - 0 ID=cds-WP_014838057.1;Parent=gene-PHA56_RS17600;Dbxref=Genbank:WP_014838057.1;Name=WP_014838057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004849779.1;locus_tag=PHA56_RS17600;product=hypothetical protein;protein_id=WP_014838057.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3684360 3684482 . + . ID=gene-PHA56_RS17605;Name=PHA56_RS17605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS17605;old_locus_tag=PHA56_17605 NZ_CP116214.1 Protein Homology CDS 3684360 3684482 . + 0 ID=cds-WP_004849777.1;Parent=gene-PHA56_RS17605;Dbxref=Genbank:WP_004849777.1;Name=WP_004849777.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226198.1;locus_tag=PHA56_RS17605;product=small membrane protein;protein_id=WP_004849777.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3684605 3685996 . - . ID=gene-PHA56_RS17610;Name=PHA56_RS17610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS17610;old_locus_tag=PHA56_17610 NZ_CP116214.1 Protein Homology CDS 3684605 3685996 . - 0 ID=cds-WP_119834473.1;Parent=gene-PHA56_RS17610;Dbxref=Genbank:WP_119834473.1;Name=WP_119834473.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226197.1;locus_tag=PHA56_RS17610;product=APC family permease;protein_id=WP_119834473.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3686349 3687767 . - . ID=gene-PHA56_RS17615;Name=puuA;gbkey=Gene;gene=puuA;gene_biotype=protein_coding;locus_tag=PHA56_RS17615;old_locus_tag=PHA56_17615 NZ_CP116214.1 Protein Homology CDS 3686349 3687767 . - 0 ID=cds-WP_004849770.1;Parent=gene-PHA56_RS17615;Dbxref=Genbank:WP_004849770.1;Name=WP_004849770.1;gbkey=CDS;gene=puuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415813.4;locus_tag=PHA56_RS17615;product=glutamate-putrescine ligase;protein_id=WP_004849770.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3687992 3688744 . + . ID=gene-PHA56_RS17620;Name=puuD;gbkey=Gene;gene=puuD;gene_biotype=protein_coding;locus_tag=PHA56_RS17620;old_locus_tag=PHA56_17620 NZ_CP116214.1 Protein Homology CDS 3687992 3688744 . + 0 ID=cds-WP_009653405.1;Parent=gene-PHA56_RS17620;Dbxref=Genbank:WP_009653405.1;Name=WP_009653405.1;Ontology_term=GO:0016787;gbkey=CDS;gene=puuD;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014838055.1;locus_tag=PHA56_RS17620;product=gamma-glutamyl-gamma-aminobutyrate hydrolase;protein_id=WP_009653405.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3688770 3689327 . + . ID=gene-PHA56_RS17625;Name=puuR;gbkey=Gene;gene=puuR;gene_biotype=protein_coding;locus_tag=PHA56_RS17625;old_locus_tag=PHA56_17625 NZ_CP116214.1 Protein Homology CDS 3688770 3689327 . + 0 ID=cds-WP_004849766.1;Parent=gene-PHA56_RS17625;Dbxref=Genbank:WP_004849766.1;Name=WP_004849766.1;gbkey=CDS;gene=puuR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001464354.1;locus_tag=PHA56_RS17625;product=HTH-type transcriptional regulator PuuR;protein_id=WP_004849766.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3689571 3691058 . + . ID=gene-PHA56_RS17630;Name=puuC;gbkey=Gene;gene=puuC;gene_biotype=protein_coding;locus_tag=PHA56_RS17630;old_locus_tag=PHA56_17630 NZ_CP116214.1 Protein Homology CDS 3689571 3691058 . + 0 ID=cds-WP_014228789.1;Parent=gene-PHA56_RS17630;Dbxref=Genbank:WP_014228789.1;Name=WP_014228789.1;Ontology_term=GO:0016620;gbkey=CDS;gene=puuC;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226192.1;locus_tag=PHA56_RS17630;product=aldehyde dehydrogenase PuuC;protein_id=WP_014228789.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3691061 3692341 . + . ID=gene-PHA56_RS17635;Name=PHA56_RS17635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS17635;old_locus_tag=PHA56_17635 NZ_CP116214.1 Protein Homology CDS 3691061 3692341 . + 0 ID=cds-WP_271292924.1;Parent=gene-PHA56_RS17635;Dbxref=Genbank:WP_271292924.1;Name=WP_271292924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226191.1;locus_tag=PHA56_RS17635;product=FAD-binding oxidoreductase;protein_id=WP_271292924.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3692371 3693318 . - . ID=gene-PHA56_RS17640;Name=PHA56_RS17640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS17640;old_locus_tag=PHA56_17640 NZ_CP116214.1 Protein Homology CDS 3692371 3693318 . - 0 ID=cds-WP_162763174.1;Parent=gene-PHA56_RS17640;Dbxref=Genbank:WP_162763174.1;Name=WP_162763174.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226190.1;locus_tag=PHA56_RS17640;product=LysR substrate-binding domain-containing protein;protein_id=WP_162763174.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3693401 3694492 . + . ID=gene-PHA56_RS17645;Name=PHA56_RS17645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS17645;old_locus_tag=PHA56_17645 NZ_CP116214.1 Protein Homology CDS 3693401 3694492 . + 0 ID=cds-WP_189087251.1;Parent=gene-PHA56_RS17645;Dbxref=Genbank:WP_189087251.1;Name=WP_189087251.1;Ontology_term=GO:0046395,GO:0009027;gbkey=CDS;go_function=tartrate dehydrogenase activity|0009027||IEA;go_process=carboxylic acid catabolic process|0046395||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016807388.1;locus_tag=PHA56_RS17645;product=tartrate dehydrogenase;protein_id=WP_189087251.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3695025 3697526 . - . ID=gene-PHA56_RS17650;Name=ptsP;gbkey=Gene;gene=ptsP;gene_biotype=protein_coding;locus_tag=PHA56_RS17650;old_locus_tag=PHA56_17650 NZ_CP116214.1 Protein Homology CDS 3695025 3697526 . - 0 ID=cds-WP_014228785.1;Parent=gene-PHA56_RS17650;Dbxref=Genbank:WP_014228785.1;Name=WP_014228785.1;Ontology_term=GO:0006808,GO:0009401,GO:0008965;gbkey=CDS;gene=ptsP;go_function=phosphoenolpyruvate-protein phosphotransferase activity|0008965||IEA;go_process=regulation of nitrogen utilization|0006808||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026278.1;locus_tag=PHA56_RS17650;product=phosphoenolpyruvate--protein phosphotransferase;protein_id=WP_014228785.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3697836 3698912 . + . ID=gene-PHA56_RS17655;Name=PHA56_RS17655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS17655;old_locus_tag=PHA56_17655 NZ_CP116214.1 Protein Homology CDS 3697836 3698912 . + 0 ID=cds-WP_038424302.1;Parent=gene-PHA56_RS17655;Dbxref=Genbank:WP_038424302.1;Name=WP_038424302.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709749.2;locus_tag=PHA56_RS17655;product=PTS fructose transporter subunit EIIC;protein_id=WP_038424302.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3698933 3699253 . + . ID=gene-PHA56_RS17660;Name=PHA56_RS17660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS17660;old_locus_tag=PHA56_17660 NZ_CP116214.1 Protein Homology CDS 3698933 3699253 . + 0 ID=cds-WP_004100938.1;Parent=gene-PHA56_RS17660;Dbxref=Genbank:WP_004100938.1;Name=WP_004100938.1;Ontology_term=GO:0009401,GO:0022877;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462993.1;locus_tag=PHA56_RS17660;product=PTS fructose-like transporter subunit IIB;protein_id=WP_004100938.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3699305 3701602 . + . ID=gene-PHA56_RS17665;Name=PHA56_RS17665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS17665;old_locus_tag=PHA56_17665 NZ_CP116214.1 Protein Homology CDS 3699305 3701602 . + 0 ID=cds-WP_271292925.1;Parent=gene-PHA56_RS17665;Dbxref=Genbank:WP_271292925.1;Name=WP_271292925.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709751.1;locus_tag=PHA56_RS17665;product=formate C-acetyltransferase;protein_id=WP_271292925.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3701568 3702443 . + . ID=gene-PHA56_RS17670;Name=PHA56_RS17670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS17670;old_locus_tag=PHA56_17670 NZ_CP116214.1 Protein Homology CDS 3701568 3702443 . + 0 ID=cds-WP_038424300.1;Parent=gene-PHA56_RS17670;Dbxref=Genbank:WP_038424300.1;Name=WP_038424300.1;Ontology_term=GO:0016491,GO:0051536;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019705934.1;locus_tag=PHA56_RS17670;product=[formate-C-acetyltransferase]-activating enzyme;protein_id=WP_038424300.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3702459 3702800 . + . ID=gene-PHA56_RS17675;Name=PHA56_RS17675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS17675;old_locus_tag=PHA56_17675 NZ_CP116214.1 Protein Homology CDS 3702459 3702800 . + 0 ID=cds-WP_004849743.1;Parent=gene-PHA56_RS17675;Dbxref=Genbank:WP_004849743.1;Name=WP_004849743.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004179260.1;locus_tag=PHA56_RS17675;product=PTS fructose-like transporter subunit IIB;protein_id=WP_004849743.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3703276 3704043 . - . ID=gene-PHA56_RS17680;Name=PHA56_RS17680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS17680;old_locus_tag=PHA56_17680 NZ_CP116214.1 Protein Homology CDS 3703276 3704043 . - 0 ID=cds-WP_038424299.1;Parent=gene-PHA56_RS17680;Dbxref=Genbank:WP_038424299.1;Name=WP_038424299.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004849740.1;locus_tag=PHA56_RS17680;product=phytanoyl-CoA dioxygenase family protein;protein_id=WP_038424299.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3704296 3705129 . + . ID=gene-PHA56_RS17685;Name=PHA56_RS17685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS17685;old_locus_tag=PHA56_17685 NZ_CP116214.1 Protein Homology CDS 3704296 3705129 . + 0 ID=cds-WP_025106241.1;Parent=gene-PHA56_RS17685;Dbxref=Genbank:WP_025106241.1;Name=WP_025106241.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004871363.1;locus_tag=PHA56_RS17685;product=AraC family transcriptional regulator;protein_id=WP_025106241.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3705131 3706033 . - . ID=gene-PHA56_RS17690;Name=PHA56_RS17690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS17690;old_locus_tag=PHA56_17690 NZ_CP116214.1 Protein Homology CDS 3705131 3706033 . - 0 ID=cds-WP_014228780.1;Parent=gene-PHA56_RS17690;Dbxref=Genbank:WP_014228780.1;Name=WP_014228780.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014228780.1;locus_tag=PHA56_RS17690;product=GGDEF domain-containing protein;protein_id=WP_014228780.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3706166 3706483 . - . ID=gene-PHA56_RS17695;Name=PHA56_RS17695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS17695;old_locus_tag=PHA56_17695 NZ_CP116214.1 Protein Homology CDS 3706166 3706483 . - 0 ID=cds-WP_014228779.1;Parent=gene-PHA56_RS17695;Dbxref=Genbank:WP_014228779.1;Name=WP_014228779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014838048.1;locus_tag=PHA56_RS17695;product=hypothetical protein;protein_id=WP_014228779.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3706606 3706734 . + . ID=gene-PHA56_RS17700;Name=PHA56_RS17700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS17700;old_locus_tag=PHA56_17700 NZ_CP116214.1 Protein Homology CDS 3706606 3706734 . + 0 ID=cds-WP_223226729.1;Parent=gene-PHA56_RS17700;Dbxref=Genbank:WP_223226729.1;Name=WP_223226729.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022606.2;locus_tag=PHA56_RS17700;product=DUF2938 family protein;protein_id=WP_223226729.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3706806 3707120 . - . ID=gene-PHA56_RS17705;Name=PHA56_RS17705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS17705;old_locus_tag=PHA56_17705 NZ_CP116214.1 Protein Homology CDS 3706806 3707120 . - 0 ID=cds-WP_014228778.1;Parent=gene-PHA56_RS17705;Dbxref=Genbank:WP_014228778.1;Name=WP_014228778.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014228778.1;locus_tag=PHA56_RS17705;product=chorismate mutase;protein_id=WP_014228778.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3707197 3707733 . - . ID=gene-PHA56_RS17710;Name=PHA56_RS17710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS17710;old_locus_tag=PHA56_17710 NZ_CP116214.1 Protein Homology CDS 3707197 3707733 . - 0 ID=cds-WP_014228777.1;Parent=gene-PHA56_RS17710;Dbxref=Genbank:WP_014228777.1;Name=WP_014228777.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012015896.1;locus_tag=PHA56_RS17710;product=LuxR C-terminal-related transcriptional regulator;protein_id=WP_014228777.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3708426 3709127 . + . ID=gene-PHA56_RS17715;Name=PHA56_RS17715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS17715;old_locus_tag=PHA56_17715 NZ_CP116214.1 Protein Homology CDS 3708426 3709127 . + 0 ID=cds-WP_014228776.1;Parent=gene-PHA56_RS17715;Dbxref=Genbank:WP_014228776.1;Name=WP_014228776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004849723.1;locus_tag=PHA56_RS17715;product=oligogalacturonate-specific porin KdgM family protein;protein_id=WP_014228776.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3709196 3710905 . + . ID=gene-PHA56_RS17720;Name=PHA56_RS17720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS17720;old_locus_tag=PHA56_17720 NZ_CP116214.1 Protein Homology CDS 3709196 3710905 . + 0 ID=cds-WP_038424298.1;Parent=gene-PHA56_RS17720;Dbxref=Genbank:WP_038424298.1;Name=WP_038424298.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019084136.1;locus_tag=PHA56_RS17720;product=pectate lyase;protein_id=WP_038424298.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3710970 3712232 . - . ID=gene-PHA56_RS17725;Name=hpxK;gbkey=Gene;gene=hpxK;gene_biotype=protein_coding;locus_tag=PHA56_RS17725;old_locus_tag=PHA56_17725 NZ_CP116214.1 Protein Homology CDS 3710970 3712232 . - 0 ID=cds-WP_038424297.1;Parent=gene-PHA56_RS17725;Dbxref=Genbank:WP_038424297.1;Name=WP_038424297.1;Ontology_term=GO:0016813;gbkey=CDS;gene=hpxK;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in linear amidines|0016813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004112030.1;locus_tag=PHA56_RS17725;product=allantoate amidohydrolase;protein_id=WP_038424297.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3712229 3713470 . - . ID=gene-PHA56_RS17730;Name=PHA56_RS17730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS17730;old_locus_tag=PHA56_17730 NZ_CP116214.1 Protein Homology CDS 3712229 3713470 . - 0 ID=cds-WP_032693401.1;Parent=gene-PHA56_RS17730;Dbxref=Genbank:WP_032693401.1;Name=WP_032693401.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009653535.1;locus_tag=PHA56_RS17730;product=alanine--glyoxylate aminotransferase family protein;protein_id=WP_032693401.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3713481 3714221 . - . ID=gene-PHA56_RS17735;Name=PHA56_RS17735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS17735;old_locus_tag=PHA56_17735 NZ_CP116214.1 Protein Homology CDS 3713481 3714221 . - 0 ID=cds-WP_038424296.1;Parent=gene-PHA56_RS17735;Dbxref=Genbank:WP_038424296.1;Name=WP_038424296.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004131222.1;locus_tag=PHA56_RS17735;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_038424296.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3714202 3714858 . - . ID=gene-PHA56_RS17740;Name=PHA56_RS17740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS17740;old_locus_tag=PHA56_17740 NZ_CP116214.1 Protein Homology CDS 3714202 3714858 . - 0 ID=cds-WP_014228771.1;Parent=gene-PHA56_RS17740;Dbxref=Genbank:WP_014228771.1;Name=WP_014228771.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227013.1;locus_tag=PHA56_RS17740;product=amino acid ABC transporter permease;protein_id=WP_014228771.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3714858 3715523 . - . ID=gene-PHA56_RS17745;Name=PHA56_RS17745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS17745;old_locus_tag=PHA56_17745 NZ_CP116214.1 Protein Homology CDS 3714858 3715523 . - 0 ID=cds-WP_014228770.1;Parent=gene-PHA56_RS17745;Dbxref=Genbank:WP_014228770.1;Name=WP_014228770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227014.1;locus_tag=PHA56_RS17745;product=amino acid ABC transporter permease;protein_id=WP_014228770.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3715533 3716318 . - . ID=gene-PHA56_RS17750;Name=PHA56_RS17750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS17750;old_locus_tag=PHA56_17750 NZ_CP116214.1 Protein Homology CDS 3715533 3716318 . - 0 ID=cds-WP_014838043.1;Parent=gene-PHA56_RS17750;Dbxref=Genbank:WP_014838043.1;Name=WP_014838043.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227015.1;locus_tag=PHA56_RS17750;product=transporter substrate-binding domain-containing protein;protein_id=WP_014838043.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3716533 3717372 . - . ID=gene-PHA56_RS17755;Name=hpxU;gbkey=Gene;gene=hpxU;gene_biotype=protein_coding;locus_tag=PHA56_RS17755;old_locus_tag=PHA56_17755 NZ_CP116214.1 Protein Homology CDS 3716533 3717372 . - 0 ID=cds-WP_004849708.1;Parent=gene-PHA56_RS17755;Dbxref=Genbank:WP_004849708.1;Name=WP_004849708.1;gbkey=CDS;gene=hpxU;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227016.1;locus_tag=PHA56_RS17755;product=MurR/RpiR family transcriptional regulator HpxU;protein_id=WP_004849708.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3717541 3719124 . + . ID=gene-PHA56_RS17760;Name=hpxW;gbkey=Gene;gene=hpxW;gene_biotype=protein_coding;locus_tag=PHA56_RS17760;old_locus_tag=PHA56_17760 NZ_CP116214.1 Protein Homology CDS 3717541 3719124 . + 0 ID=cds-WP_032719723.1;Parent=gene-PHA56_RS17760;Dbxref=Genbank:WP_032719723.1;Name=WP_032719723.1;gbkey=CDS;gene=hpxW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020078783.1;locus_tag=PHA56_RS17760;product=oxamate amidohydrolase;protein_id=WP_032719723.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3719134 3719322 . + . ID=gene-PHA56_RS17765;Name=hpxX;gbkey=Gene;gene=hpxX;gene_biotype=protein_coding;locus_tag=PHA56_RS17765;old_locus_tag=PHA56_17765 NZ_CP116214.1 Protein Homology CDS 3719134 3719322 . + 0 ID=cds-WP_004131209.1;Parent=gene-PHA56_RS17765;Dbxref=Genbank:WP_004131209.1;Name=WP_004131209.1;gbkey=CDS;gene=hpxX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004131209.1;locus_tag=PHA56_RS17765;product=oxalurate catabolism protein HpxX;protein_id=WP_004131209.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3719319 3720716 . + . ID=gene-PHA56_RS17770;Name=PHA56_RS17770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS17770;old_locus_tag=PHA56_17770 NZ_CP116214.1 Protein Homology CDS 3719319 3720716 . + 0 ID=cds-WP_014228766.1;Parent=gene-PHA56_RS17770;Dbxref=Genbank:WP_014228766.1;Name=WP_014228766.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017146159.1;locus_tag=PHA56_RS17770;product=AtzE family amidohydrolase;protein_id=WP_014228766.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3720713 3721099 . + . ID=gene-PHA56_RS17775;Name=hpxZ;gbkey=Gene;gene=hpxZ;gene_biotype=protein_coding;locus_tag=PHA56_RS17775;old_locus_tag=PHA56_17775 NZ_CP116214.1 Protein Homology CDS 3720713 3721099 . + 0 ID=cds-WP_088941759.1;Parent=gene-PHA56_RS17775;Dbxref=Genbank:WP_088941759.1;Name=WP_088941759.1;gbkey=CDS;gene=hpxZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004131200.1;locus_tag=PHA56_RS17775;product=oxalurate catabolism protein HpxZ;protein_id=WP_088941759.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3721337 3722269 . - . ID=gene-PHA56_RS17780;Name=puuE;gbkey=Gene;gene=puuE;gene_biotype=protein_coding;locus_tag=PHA56_RS17780;old_locus_tag=PHA56_17780 NZ_CP116214.1 Protein Homology CDS 3721337 3722269 . - 0 ID=cds-WP_004849698.1;Parent=gene-PHA56_RS17780;Dbxref=Genbank:WP_004849698.1;Name=WP_004849698.1;Ontology_term=GO:0000256,GO:0016810;gbkey=CDS;gene=puuE;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;go_process=allantoin catabolic process|0000256||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004849698.1;locus_tag=PHA56_RS17780;product=allantoinase PuuE;protein_id=WP_004849698.1;transl_table=11 NZ_CP116214.1 RefSeq pseudogene 3722157 3723029 . - . ID=gene-PHA56_RS17785;Name=PHA56_RS17785;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS17785;old_locus_tag=PHA56_17785;partial=true;pseudo=true;start_range=.,3722157 NZ_CP116214.1 Protein Homology CDS 3722157 3723029 . - 0 ID=cds-PHA56_RS17785;Parent=gene-PHA56_RS17785;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006807,GO:0036361;gbkey=CDS;go_function=racemase activity%2C acting on amino acids and derivatives|0036361||IEA;go_process=nitrogen compound metabolic process|0006807||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227042.1;locus_tag=PHA56_RS17785;partial=true;product=aspartate/glutamate racemase family protein;pseudo=true;start_range=.,3722157;transl_table=11 NZ_CP116214.1 RefSeq gene 3723029 3723745 . - . ID=gene-PHA56_RS17790;Name=PHA56_RS17790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS17790;old_locus_tag=PHA56_17790 NZ_CP116214.1 Protein Homology CDS 3723029 3723745 . - 0 ID=cds-WP_014228762.1;Parent=gene-PHA56_RS17790;Dbxref=Genbank:WP_014228762.1;Name=WP_014228762.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014228762.1;locus_tag=PHA56_RS17790;product=GntR family transcriptional regulator;protein_id=WP_014228762.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3723890 3725377 . + . ID=gene-PHA56_RS17795;Name=PHA56_RS17795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS17795;old_locus_tag=PHA56_17795 NZ_CP116214.1 Protein Homology CDS 3723890 3725377 . + 0 ID=cds-WP_076752541.1;Parent=gene-PHA56_RS17795;Dbxref=Genbank:WP_076752541.1;Name=WP_076752541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009653427.1;locus_tag=PHA56_RS17795;product=NCS1 family nucleobase:cation symporter-1;protein_id=WP_076752541.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3725487 3726806 . + . ID=gene-PHA56_RS17800;Name=guaD;gbkey=Gene;gene=guaD;gene_biotype=protein_coding;locus_tag=PHA56_RS17800;old_locus_tag=PHA56_17800 NZ_CP116214.1 Protein Homology CDS 3725487 3726806 . + 0 ID=cds-WP_271292985.1;Parent=gene-PHA56_RS17800;Dbxref=Genbank:WP_271292985.1;Name=WP_271292985.1;Ontology_term=GO:0006147,GO:0008892;gbkey=CDS;gene=guaD;go_function=guanine deaminase activity|0008892||IEA;go_process=guanine catabolic process|0006147||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014228760.1;locus_tag=PHA56_RS17800;product=guanine deaminase;protein_id=WP_271292985.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3726911 3727237 . - . ID=gene-PHA56_RS17805;Name=uraH;gbkey=Gene;gene=uraH;gene_biotype=protein_coding;locus_tag=PHA56_RS17805;old_locus_tag=PHA56_17805 NZ_CP116214.1 Protein Homology CDS 3726911 3727237 . - 0 ID=cds-WP_014228759.1;Parent=gene-PHA56_RS17805;Dbxref=Genbank:WP_014228759.1;Name=WP_014228759.1;Ontology_term=GO:0019628;gbkey=CDS;gene=uraH;go_process=urate catabolic process|0019628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004143476.1;locus_tag=PHA56_RS17805;product=hydroxyisourate hydrolase;protein_id=WP_014228759.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3727234 3727734 . - . ID=gene-PHA56_RS17810;Name=uraD;gbkey=Gene;gene=uraD;gene_biotype=protein_coding;locus_tag=PHA56_RS17810;old_locus_tag=PHA56_17810 NZ_CP116214.1 Protein Homology CDS 3727234 3727734 . - 0 ID=cds-WP_014228758.1;Parent=gene-PHA56_RS17810;Dbxref=Genbank:WP_014228758.1;Name=WP_014228758.1;Ontology_term=GO:0019628;gbkey=CDS;gene=uraD;go_process=urate catabolic process|0019628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020804988.1;locus_tag=PHA56_RS17810;product=2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase;protein_id=WP_014228758.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3727712 3729094 . - . ID=gene-PHA56_RS17815;Name=PHA56_RS17815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS17815;old_locus_tag=PHA56_17815 NZ_CP116214.1 Protein Homology CDS 3727712 3729094 . - 0 ID=cds-WP_014228757.1;Parent=gene-PHA56_RS17815;Dbxref=Genbank:WP_014228757.1;Name=WP_014228757.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226898.1;locus_tag=PHA56_RS17815;product=nucleobase:cation symporter-2 family protein;protein_id=WP_014228757.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3729441 3730595 . + . ID=gene-PHA56_RS17820;Name=hpxO;gbkey=Gene;gene=hpxO;gene_biotype=protein_coding;locus_tag=PHA56_RS17820;old_locus_tag=PHA56_17820 NZ_CP116214.1 Protein Homology CDS 3729441 3730595 . + 0 ID=cds-WP_014228756.1;Parent=gene-PHA56_RS17820;Dbxref=Genbank:WP_014228756.1;Name=WP_014228756.1;Ontology_term=GO:0071949;gbkey=CDS;gene=hpxO;go_function=FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226897.1;locus_tag=PHA56_RS17820;product=FAD-dependent urate hydroxylase HpxO;protein_id=WP_014228756.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3731160 3732092 . - . ID=gene-PHA56_RS17825;Name=hpxR;gbkey=Gene;gene=hpxR;gene_biotype=protein_coding;locus_tag=PHA56_RS17825;old_locus_tag=PHA56_17825 NZ_CP116214.1 Protein Homology CDS 3731160 3732092 . - 0 ID=cds-WP_025106218.1;Parent=gene-PHA56_RS17825;Dbxref=Genbank:WP_025106218.1;Name=WP_025106218.1;gbkey=CDS;gene=hpxR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004849681.1;locus_tag=PHA56_RS17825;product=LysR family hpxDE operon transcriptional regulator HpxR;protein_id=WP_025106218.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3732218 3733255 . + . ID=gene-PHA56_RS17830;Name=hpxD;gbkey=Gene;gene=hpxD;gene_biotype=protein_coding;locus_tag=PHA56_RS17830;old_locus_tag=PHA56_17830 NZ_CP116214.1 Protein Homology CDS 3732218 3733255 . + 0 ID=cds-WP_014228754.1;Parent=gene-PHA56_RS17830;Dbxref=Genbank:WP_014228754.1;Name=WP_014228754.1;gbkey=CDS;gene=hpxD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004860301.1;locus_tag=PHA56_RS17830;product=molybdenum cofactor-independent xanthine hydroxylase subunit HpxD;protein_id=WP_014228754.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3733269 3734237 . + . ID=gene-PHA56_RS17835;Name=PHA56_RS17835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS17835;old_locus_tag=PHA56_17835 NZ_CP116214.1 Protein Homology CDS 3733269 3734237 . + 0 ID=cds-WP_119834475.1;Parent=gene-PHA56_RS17835;Dbxref=Genbank:WP_119834475.1;Name=WP_119834475.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004131177.1;locus_tag=PHA56_RS17835;product=PDR/VanB family oxidoreductase;protein_id=WP_119834475.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3734248 3735276 . - . ID=gene-PHA56_RS17840;Name=PHA56_RS17840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS17840;old_locus_tag=PHA56_17840 NZ_CP116214.1 Protein Homology CDS 3734248 3735276 . - 0 ID=cds-WP_032693394.1;Parent=gene-PHA56_RS17840;Dbxref=Genbank:WP_032693394.1;Name=WP_032693394.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014228752.1;locus_tag=PHA56_RS17840;product=ABC transporter ATP-binding protein;protein_id=WP_032693394.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3735277 3736851 . - . ID=gene-PHA56_RS17845;Name=PHA56_RS17845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS17845;old_locus_tag=PHA56_17845 NZ_CP116214.1 Protein Homology CDS 3735277 3736851 . - 0 ID=cds-WP_032693393.1;Parent=gene-PHA56_RS17845;Dbxref=Genbank:WP_032693393.1;Name=WP_032693393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004195815.1;locus_tag=PHA56_RS17845;product=iron ABC transporter permease;protein_id=WP_032693393.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3736875 3737891 . - . ID=gene-PHA56_RS17850;Name=PHA56_RS17850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS17850;old_locus_tag=PHA56_17850 NZ_CP116214.1 Protein Homology CDS 3736875 3737891 . - 0 ID=cds-WP_014228750.1;Parent=gene-PHA56_RS17850;Dbxref=Genbank:WP_014228750.1;Name=WP_014228750.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013813041.1;locus_tag=PHA56_RS17850;product=iron ABC transporter substrate-binding protein;protein_id=WP_014228750.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3738153 3738632 . - . ID=gene-PHA56_RS17855;Name=PHA56_RS17855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS17855;old_locus_tag=PHA56_17855 NZ_CP116214.1 Protein Homology CDS 3738153 3738632 . - 0 ID=cds-WP_162763189.1;Parent=gene-PHA56_RS17855;Dbxref=Genbank:WP_162763189.1;Name=WP_162763189.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014071420.1;locus_tag=PHA56_RS17855;product=hypothetical protein;protein_id=WP_162763189.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3739144 3740091 . - . ID=gene-PHA56_RS17860;Name=leuO;gbkey=Gene;gene=leuO;gene_biotype=protein_coding;locus_tag=PHA56_RS17860;old_locus_tag=PHA56_17860 NZ_CP116214.1 Protein Homology CDS 3739144 3740091 . - 0 ID=cds-WP_014228748.1;Parent=gene-PHA56_RS17860;Dbxref=Genbank:WP_014228748.1;Name=WP_014228748.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=leuO;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004112016.1;locus_tag=PHA56_RS17860;product=transcriptional regulator LeuO;protein_id=WP_014228748.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3741000 3741380 . + . ID=gene-PHA56_RS17865;Name=PHA56_RS17865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS17865;old_locus_tag=PHA56_17865 NZ_CP116214.1 Protein Homology CDS 3741000 3741380 . + 0 ID=cds-WP_032693391.1;Parent=gene-PHA56_RS17865;Dbxref=Genbank:WP_032693391.1;Name=WP_032693391.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014838035.1;locus_tag=PHA56_RS17865;product=hypothetical protein;protein_id=WP_032693391.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3741426 3743450 . + . ID=gene-PHA56_RS17870;Name=PHA56_RS17870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS17870;old_locus_tag=PHA56_17870 NZ_CP116214.1 Protein Homology CDS 3741426 3743450 . + 0 ID=cds-WP_032693390.1;Parent=gene-PHA56_RS17870;Dbxref=Genbank:WP_032693390.1;Name=WP_032693390.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004849665.1;locus_tag=PHA56_RS17870;product=protein-disulfide reductase DsbD family protein;protein_id=WP_032693390.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3743457 3744179 . + . ID=gene-PHA56_RS17875;Name=PHA56_RS17875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS17875;old_locus_tag=PHA56_17875 NZ_CP116214.1 Protein Homology CDS 3743457 3744179 . + 0 ID=cds-WP_032693389.1;Parent=gene-PHA56_RS17875;Dbxref=Genbank:WP_032693389.1;Name=WP_032693389.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004849662.1;locus_tag=PHA56_RS17875;product=DsbA family protein;protein_id=WP_032693389.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3744224 3744982 . + . ID=gene-PHA56_RS17880;Name=dsbG;gbkey=Gene;gene=dsbG;gene_biotype=protein_coding;locus_tag=PHA56_RS17880;old_locus_tag=PHA56_17880 NZ_CP116214.1 Protein Homology CDS 3744224 3744982 . + 0 ID=cds-WP_032693388.1;Parent=gene-PHA56_RS17880;Dbxref=Genbank:WP_032693388.1;Name=WP_032693388.1;gbkey=CDS;gene=dsbG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014228744.1;locus_tag=PHA56_RS17880;product=thiol:disulfide interchange protein DsbG;protein_id=WP_032693388.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3745090 3745425 . + . ID=gene-PHA56_RS17885;Name=PHA56_RS17885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS17885;old_locus_tag=PHA56_17885 NZ_CP116214.1 Protein Homology CDS 3745090 3745425 . + 0 ID=cds-WP_014228743.1;Parent=gene-PHA56_RS17885;Dbxref=Genbank:WP_014228743.1;Name=WP_014228743.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014228743.1;locus_tag=PHA56_RS17885;product=gamma-glutamylcyclotransferase;protein_id=WP_014228743.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3745469 3746497 . - . ID=gene-PHA56_RS17890;Name=PHA56_RS17890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS17890;old_locus_tag=PHA56_17890 NZ_CP116214.1 Protein Homology CDS 3745469 3746497 . - 0 ID=cds-WP_076752540.1;Parent=gene-PHA56_RS17890;Dbxref=Genbank:WP_076752540.1;Name=WP_076752540.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017146170.1;locus_tag=PHA56_RS17890;product=LLM class flavin-dependent oxidoreductase;protein_id=WP_076752540.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3746690 3747067 . - . ID=gene-PHA56_RS17895;Name=PHA56_RS17895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS17895;old_locus_tag=PHA56_17895 NZ_CP116214.1 Protein Homology CDS 3746690 3747067 . - 0 ID=cds-WP_032693387.1;Parent=gene-PHA56_RS17895;Dbxref=Genbank:WP_032693387.1;Name=WP_032693387.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004131151.1;locus_tag=PHA56_RS17895;product=RidA family protein;protein_id=WP_032693387.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3747306 3748193 . + . ID=gene-PHA56_RS17900;Name=PHA56_RS17900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS17900;old_locus_tag=PHA56_17900 NZ_CP116214.1 Protein Homology CDS 3747306 3748193 . + 0 ID=cds-WP_014228740.1;Parent=gene-PHA56_RS17900;Dbxref=Genbank:WP_014228740.1;Name=WP_014228740.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004131149.1;locus_tag=PHA56_RS17900;product=ATP-grasp fold amidoligase family protein;protein_id=WP_014228740.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3748229 3749299 . - . ID=gene-PHA56_RS17905;Name=PHA56_RS17905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS17905;old_locus_tag=PHA56_17905 NZ_CP116214.1 Protein Homology CDS 3748229 3749299 . - 0 ID=cds-WP_014228739.1;Parent=gene-PHA56_RS17905;Dbxref=Genbank:WP_014228739.1;Name=WP_014228739.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014228739.1;locus_tag=PHA56_RS17905;product=ATP-binding protein;protein_id=WP_014228739.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3749296 3750000 . - . ID=gene-PHA56_RS17910;Name=PHA56_RS17910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS17910;old_locus_tag=PHA56_17910 NZ_CP116214.1 Protein Homology CDS 3749296 3750000 . - 0 ID=cds-WP_004131145.1;Parent=gene-PHA56_RS17910;Dbxref=Genbank:WP_004131145.1;Name=WP_004131145.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227346.1;locus_tag=PHA56_RS17910;product=response regulator;protein_id=WP_004131145.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3750359 3750745 . + . ID=gene-PHA56_RS17915;Name=PHA56_RS17915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS17915;old_locus_tag=PHA56_17915 NZ_CP116214.1 Protein Homology CDS 3750359 3750745 . + 0 ID=cds-WP_014838032.1;Parent=gene-PHA56_RS17915;Dbxref=Genbank:WP_014838032.1;Name=WP_014838032.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009651744.1;locus_tag=PHA56_RS17915;product=hypothetical protein;protein_id=WP_014838032.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3751064 3754183 . + . ID=gene-PHA56_RS17920;Name=PHA56_RS17920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS17920;old_locus_tag=PHA56_17920 NZ_CP116214.1 Protein Homology CDS 3751064 3754183 . + 0 ID=cds-WP_014228737.1;Parent=gene-PHA56_RS17920;Dbxref=Genbank:WP_014228737.1;Name=WP_014228737.1;Ontology_term=GO:0042908,GO:0055085,GO:0015562,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=xenobiotic transport|0042908||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009651743.1;locus_tag=PHA56_RS17920;product=multidrug efflux RND transporter permease subunit;protein_id=WP_014228737.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3754820 3755041 . - . ID=gene-PHA56_RS17925;Name=PHA56_RS17925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS17925;old_locus_tag=PHA56_17925 NZ_CP116214.1 Protein Homology CDS 3754820 3755041 . - 0 ID=cds-WP_004849645.1;Parent=gene-PHA56_RS17925;Dbxref=Genbank:WP_004849645.1;Name=WP_004849645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004871463.1;locus_tag=PHA56_RS17925;product=cold-shock protein;protein_id=WP_004849645.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3755618 3756598 . + . ID=gene-PHA56_RS17930;Name=PHA56_RS17930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS17930;old_locus_tag=PHA56_17930 NZ_CP116214.1 Protein Homology CDS 3755618 3756598 . + 0 ID=cds-WP_000019473.1;Parent=gene-PHA56_RS17930;Dbxref=Genbank:WP_000019473.1;Name=WP_000019473.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000019445.1;locus_tag=PHA56_RS17930;product=IS5-like element ISKpn26 family transposase;protein_id=WP_000019473.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3756873 3759473 . - . ID=gene-PHA56_RS17935;Name=acnB;gbkey=Gene;gene=acnB;gene_biotype=protein_coding;locus_tag=PHA56_RS17935;old_locus_tag=PHA56_17935 NZ_CP116214.1 Protein Homology CDS 3756873 3759473 . - 0 ID=cds-WP_014838028.1;Parent=gene-PHA56_RS17935;Dbxref=Genbank:WP_014838028.1;Name=WP_014838028.1;Ontology_term=GO:0006099,GO:0003994;gbkey=CDS;gene=acnB;go_function=aconitate hydratase activity|0003994||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014838028.1;locus_tag=PHA56_RS17935;product=bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase;protein_id=WP_014838028.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3759542 3760108 . - . ID=gene-PHA56_RS17940;Name=PHA56_RS17940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS17940;old_locus_tag=PHA56_17940 NZ_CP116214.1 Protein Homology CDS 3759542 3760108 . - 0 ID=cds-WP_014838027.1;Parent=gene-PHA56_RS17940;Dbxref=Genbank:WP_014838027.1;Name=WP_014838027.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014838027.1;locus_tag=PHA56_RS17940;product=alpha/beta hydrolase;protein_id=WP_014838027.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3760141 3761013 . - . ID=gene-PHA56_RS17945;Name=citG;gbkey=Gene;gene=citG;gene_biotype=protein_coding;locus_tag=PHA56_RS17945;old_locus_tag=PHA56_17945 NZ_CP116214.1 Protein Homology CDS 3760141 3761013 . - 0 ID=cds-WP_038424290.1;Parent=gene-PHA56_RS17945;Dbxref=Genbank:WP_038424290.1;Name=WP_038424290.1;Ontology_term=GO:0019361,GO:0046917;gbkey=CDS;gene=citG;go_function=triphosphoribosyl-dephospho-CoA synthase activity|0046917||IEA;go_process=2'-(5''-triphosphoribosyl)-3'-dephospho-CoA biosynthetic process|0019361||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004849633.1;locus_tag=PHA56_RS17945;product=triphosphoribosyl-dephospho-CoA synthase CitG;protein_id=WP_038424290.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3760988 3761536 . - . ID=gene-PHA56_RS17950;Name=citX;gbkey=Gene;gene=citX;gene_biotype=protein_coding;locus_tag=PHA56_RS17950;old_locus_tag=PHA56_17950 NZ_CP116214.1 Protein Homology CDS 3760988 3761536 . - 0 ID=cds-WP_014228731.1;Parent=gene-PHA56_RS17950;Dbxref=Genbank:WP_014228731.1;Name=WP_014228731.1;Ontology_term=GO:0051191,GO:0050519;gbkey=CDS;gene=citX;go_function=holo-citrate lyase synthase activity|0050519||IEA;go_process=prosthetic group biosynthetic process|0051191||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014228731.1;locus_tag=PHA56_RS17950;product=citrate lyase holo-[acyl-carrier protein] synthase;protein_id=WP_014228731.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3761533 3763053 . - . ID=gene-PHA56_RS17955;Name=citF;gbkey=Gene;gene=citF;gene_biotype=protein_coding;locus_tag=PHA56_RS17955;old_locus_tag=PHA56_17955 NZ_CP116214.1 Protein Homology CDS 3761533 3763053 . - 0 ID=cds-WP_014838024.1;Parent=gene-PHA56_RS17955;Dbxref=Genbank:WP_014838024.1;Name=WP_014838024.1;Ontology_term=GO:0006113,GO:0008814,GO:0008815,GO:0009346;gbkey=CDS;gene=citF;go_component=ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate CoA-transferase activity|0008814||IEA,citrate (pro-3S)-lyase activity|0008815||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014838024.1;locus_tag=PHA56_RS17955;product=citrate lyase subunit alpha;protein_id=WP_014838024.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3763087 3763962 . - . ID=gene-PHA56_RS17960;Name=citE;gbkey=Gene;gene=citE;gene_biotype=protein_coding;locus_tag=PHA56_RS17960;old_locus_tag=PHA56_17960 NZ_CP116214.1 Protein Homology CDS 3763087 3763962 . - 0 ID=cds-WP_014228729.1;Parent=gene-PHA56_RS17960;Dbxref=Genbank:WP_014228729.1;Name=WP_014228729.1;Ontology_term=GO:0006113,GO:0008815,GO:0009346;gbkey=CDS;gene=citE;go_component=ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate (pro-3S)-lyase activity|0008815||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003862436.1;locus_tag=PHA56_RS17960;product=citrate (pro-3S)-lyase subunit beta;protein_id=WP_014228729.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3763962 3764252 . - . ID=gene-PHA56_RS17965;Name=citD;gbkey=Gene;gene=citD;gene_biotype=protein_coding;locus_tag=PHA56_RS17965;old_locus_tag=PHA56_17965 NZ_CP116214.1 Protein Homology CDS 3763962 3764252 . - 0 ID=cds-WP_004849626.1;Parent=gene-PHA56_RS17965;Dbxref=Genbank:WP_004849626.1;Name=WP_004849626.1;Ontology_term=GO:0006113,GO:0008815,GO:0009346;gbkey=CDS;gene=citD;go_component=ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate (pro-3S)-lyase activity|0008815||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015840004.1;locus_tag=PHA56_RS17965;product=citrate lyase acyl carrier protein;protein_id=WP_004849626.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3764277 3765350 . - . ID=gene-PHA56_RS17970;Name=citC;gbkey=Gene;gene=citC;gene_biotype=protein_coding;locus_tag=PHA56_RS17970;old_locus_tag=PHA56_17970 NZ_CP116214.1 Protein Homology CDS 3764277 3765350 . - 0 ID=cds-WP_014228728.1;Parent=gene-PHA56_RS17970;Dbxref=Genbank:WP_014228728.1;Name=WP_014228728.1;Ontology_term=GO:0006101,GO:0008771;gbkey=CDS;gene=citC;go_function=[citrate (pro-3S)-lyase] ligase activity|0008771||IEA;go_process=citrate metabolic process|0006101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014228728.1;locus_tag=PHA56_RS17970;product=[citrate (pro-3S)-lyase] ligase;protein_id=WP_014228728.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3765372 3766274 . - . ID=gene-PHA56_RS17975;Name=PHA56_RS17975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS17975;old_locus_tag=PHA56_17975 NZ_CP116214.1 Protein Homology CDS 3765372 3766274 . - 0 ID=cds-WP_014838023.1;Parent=gene-PHA56_RS17975;Dbxref=Genbank:WP_014838023.1;Name=WP_014838023.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004849623.1;locus_tag=PHA56_RS17975;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_014838023.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3766354 3767592 . - . ID=gene-PHA56_RS17980;Name=PHA56_RS17980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS17980;old_locus_tag=PHA56_17980 NZ_CP116214.1 Protein Homology CDS 3766354 3767592 . - 0 ID=cds-WP_014838022.1;Parent=gene-PHA56_RS17980;Dbxref=Genbank:WP_014838022.1;Name=WP_014838022.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014838022.1;locus_tag=PHA56_RS17980;product=MFS transporter;protein_id=WP_014838022.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3767687 3768775 . - . ID=gene-PHA56_RS17985;Name=PHA56_RS17985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS17985;old_locus_tag=PHA56_17985 NZ_CP116214.1 Protein Homology CDS 3767687 3768775 . - 0 ID=cds-WP_038423240.1;Parent=gene-PHA56_RS17985;Dbxref=Genbank:WP_038423240.1;Name=WP_038423240.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004849620.1;locus_tag=PHA56_RS17985;product=4-oxalomesaconate tautomerase;protein_id=WP_038423240.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3768934 3769860 . + . ID=gene-PHA56_RS17990;Name=PHA56_RS17990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS17990;old_locus_tag=PHA56_17990 NZ_CP116214.1 Protein Homology CDS 3768934 3769860 . + 0 ID=cds-WP_004131117.1;Parent=gene-PHA56_RS17990;Dbxref=Genbank:WP_004131117.1;Name=WP_004131117.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004131117.1;locus_tag=PHA56_RS17990;product=LysR family transcriptional regulator;protein_id=WP_004131117.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3770261 3771085 . + . ID=gene-PHA56_RS17995;Name=PHA56_RS17995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS17995;old_locus_tag=PHA56_17995 NZ_CP116214.1 Protein Homology CDS 3770261 3771085 . + 0 ID=cds-WP_014228723.1;Parent=gene-PHA56_RS17995;Dbxref=Genbank:WP_014228723.1;Name=WP_014228723.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010278662.1;locus_tag=PHA56_RS17995;product=transporter substrate-binding domain-containing protein;protein_id=WP_014228723.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3771090 3772499 . - . ID=gene-PHA56_RS18000;Name=PHA56_RS18000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS18000;old_locus_tag=PHA56_18000 NZ_CP116214.1 Protein Homology CDS 3771090 3772499 . - 0 ID=cds-WP_119834478.1;Parent=gene-PHA56_RS18000;Dbxref=Genbank:WP_119834478.1;Name=WP_119834478.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014228722.1;locus_tag=PHA56_RS18000;product=MmgE/PrpD family protein;protein_id=WP_119834478.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3772642 3773313 . + . ID=gene-PHA56_RS18005;Name=PHA56_RS18005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS18005;old_locus_tag=PHA56_18005 NZ_CP116214.1 Protein Homology CDS 3772642 3773313 . + 0 ID=cds-WP_014838019.1;Parent=gene-PHA56_RS18005;Dbxref=Genbank:WP_014838019.1;Name=WP_014838019.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014838019.1;locus_tag=PHA56_RS18005;product=amino acid ABC transporter permease;protein_id=WP_014838019.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3773327 3773992 . + . ID=gene-PHA56_RS18010;Name=PHA56_RS18010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS18010;old_locus_tag=PHA56_18010 NZ_CP116214.1 Protein Homology CDS 3773327 3773992 . + 0 ID=cds-WP_014228720.1;Parent=gene-PHA56_RS18010;Dbxref=Genbank:WP_014228720.1;Name=WP_014228720.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011094500.1;locus_tag=PHA56_RS18010;product=amino acid ABC transporter permease;protein_id=WP_014228720.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3774009 3774788 . + . ID=gene-PHA56_RS18015;Name=PHA56_RS18015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS18015;old_locus_tag=PHA56_18015 NZ_CP116214.1 Protein Homology CDS 3774009 3774788 . + 0 ID=cds-WP_014228719.1;Parent=gene-PHA56_RS18015;Dbxref=Genbank:WP_014228719.1;Name=WP_014228719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014228719.1;locus_tag=PHA56_RS18015;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_014228719.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3774804 3775769 . + . ID=gene-PHA56_RS18020;Name=PHA56_RS18020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS18020;old_locus_tag=PHA56_18020 NZ_CP116214.1 Protein Homology CDS 3774804 3775769 . + 0 ID=cds-WP_038424287.1;Parent=gene-PHA56_RS18020;Dbxref=Genbank:WP_038424287.1;Name=WP_038424287.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004871480.1;locus_tag=PHA56_RS18020;product=aminotransferase class IV;protein_id=WP_038424287.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3776202 3776780 . + . ID=gene-PHA56_RS18025;Name=PHA56_RS18025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS18025;old_locus_tag=PHA56_18025 NZ_CP116214.1 Protein Homology CDS 3776202 3776780 . + 0 ID=cds-WP_076752539.1;Parent=gene-PHA56_RS18025;Dbxref=Genbank:WP_076752539.1;Name=WP_076752539.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227000.1;locus_tag=PHA56_RS18025;product=TetR/AcrR family transcriptional regulator;protein_id=WP_076752539.1;transl_table=11 NZ_CP116214.1 RefSeq pseudogene 3776756 3777851 . - . ID=gene-PHA56_RS18030;Name=PHA56_RS18030;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS18030;old_locus_tag=PHA56_18030;pseudo=true NZ_CP116214.1 Protein Homology CDS 3776756 3777851 . - 0 ID=cds-PHA56_RS18030;Parent=gene-PHA56_RS18030;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227001.1;locus_tag=PHA56_RS18030;product=iron-containing redox enzyme family protein;pseudo=true;transl_table=11 NZ_CP116214.1 RefSeq gene 3778064 3778966 . + . ID=gene-PHA56_RS18035;Name=PHA56_RS18035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS18035;old_locus_tag=PHA56_18035 NZ_CP116214.1 Protein Homology CDS 3778064 3778966 . + 0 ID=cds-WP_014228716.1;Parent=gene-PHA56_RS18035;Dbxref=Genbank:WP_014228716.1;Name=WP_014228716.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004112000.1;locus_tag=PHA56_RS18035;product=DMT family transporter;protein_id=WP_014228716.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3779011 3780150 . + . ID=gene-PHA56_RS18040;Name=PHA56_RS18040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS18040;old_locus_tag=PHA56_18040 NZ_CP116214.1 Protein Homology CDS 3779011 3780150 . + 0 ID=cds-WP_163585710.1;Parent=gene-PHA56_RS18040;Dbxref=Genbank:WP_163585710.1;Name=WP_163585710.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014228715.1;locus_tag=PHA56_RS18040;product=MFS transporter;protein_id=WP_163585710.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3780123 3780380 . + . ID=gene-PHA56_RS18045;Name=PHA56_RS18045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS18045;old_locus_tag=PHA56_18045 NZ_CP116214.1 GeneMarkS-2+ CDS 3780123 3780380 . + 0 ID=cds-WP_223226728.1;Parent=gene-PHA56_RS18045;Dbxref=Genbank:WP_223226728.1;Name=WP_223226728.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PHA56_RS18045;product=hypothetical protein;protein_id=WP_223226728.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3780398 3783478 . - . ID=gene-PHA56_RS18050;Name=PHA56_RS18050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS18050;old_locus_tag=PHA56_18050 NZ_CP116214.1 Protein Homology CDS 3780398 3783478 . - 0 ID=cds-WP_076752538.1;Parent=gene-PHA56_RS18050;Dbxref=Genbank:WP_076752538.1;Name=WP_076752538.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014838014.1;locus_tag=PHA56_RS18050;product=efflux RND transporter permease subunit;protein_id=WP_076752538.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3783475 3784584 . - . ID=gene-PHA56_RS18055;Name=PHA56_RS18055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS18055;old_locus_tag=PHA56_18055 NZ_CP116214.1 Protein Homology CDS 3783475 3784584 . - 0 ID=cds-WP_014228711.1;Parent=gene-PHA56_RS18055;Dbxref=Genbank:WP_014228711.1;Name=WP_014228711.1;Ontology_term=GO:0006810,GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009651935.1;locus_tag=PHA56_RS18055;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_014228711.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3784660 3785274 . - . ID=gene-PHA56_RS18060;Name=PHA56_RS18060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS18060;old_locus_tag=PHA56_18060 NZ_CP116214.1 Protein Homology CDS 3784660 3785274 . - 0 ID=cds-WP_032693376.1;Parent=gene-PHA56_RS18060;Dbxref=Genbank:WP_032693376.1;Name=WP_032693376.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012541387.1;locus_tag=PHA56_RS18060;product=TetR/AcrR family transcriptional regulator;protein_id=WP_032693376.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3785653 3786660 . - . ID=gene-PHA56_RS18065;Name=PHA56_RS18065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS18065;old_locus_tag=PHA56_18065 NZ_CP116214.1 Protein Homology CDS 3785653 3786660 . - 0 ID=cds-WP_038424282.1;Parent=gene-PHA56_RS18065;Dbxref=Genbank:WP_038424282.1;Name=WP_038424282.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014228709.1;locus_tag=PHA56_RS18065;product=NADP-dependent oxidoreductase;protein_id=WP_038424282.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3786827 3787651 . - . ID=gene-PHA56_RS18070;Name=PHA56_RS18070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS18070;old_locus_tag=PHA56_18070 NZ_CP116214.1 Protein Homology CDS 3786827 3787651 . - 0 ID=cds-WP_038424281.1;Parent=gene-PHA56_RS18070;Dbxref=Genbank:WP_038424281.1;Name=WP_038424281.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014228708.1;locus_tag=PHA56_RS18070;product=oxidoreductase;protein_id=WP_038424281.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3787868 3788428 . + . ID=gene-PHA56_RS18075;Name=PHA56_RS18075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS18075;old_locus_tag=PHA56_18075 NZ_CP116214.1 Protein Homology CDS 3787868 3788428 . + 0 ID=cds-WP_014228707.1;Parent=gene-PHA56_RS18075;Dbxref=Genbank:WP_014228707.1;Name=WP_014228707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014228707.1;locus_tag=PHA56_RS18075;product=TetR/AcrR family transcriptional regulator;protein_id=WP_014228707.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3788471 3789310 . - . ID=gene-PHA56_RS18080;Name=PHA56_RS18080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS18080;old_locus_tag=PHA56_18080 NZ_CP116214.1 Protein Homology CDS 3788471 3789310 . - 0 ID=cds-WP_038423462.1;Parent=gene-PHA56_RS18080;Dbxref=Genbank:WP_038423462.1;Name=WP_038423462.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004955461.1;locus_tag=PHA56_RS18080;product=AraC family transcriptional regulator;protein_id=WP_038423462.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3789511 3790818 . + . ID=gene-PHA56_RS18085;Name=PHA56_RS18085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS18085;old_locus_tag=PHA56_18085 NZ_CP116214.1 Protein Homology CDS 3789511 3790818 . + 0 ID=cds-WP_014228704.1;Parent=gene-PHA56_RS18085;Dbxref=Genbank:WP_014228704.1;Name=WP_014228704.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004849597.1;locus_tag=PHA56_RS18085;product=alpha-glucosidase/alpha-galactosidase;protein_id=WP_014228704.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3791003 3791365 . - . ID=gene-PHA56_RS18090;Name=PHA56_RS18090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS18090;old_locus_tag=PHA56_18090 NZ_CP116214.1 Protein Homology CDS 3791003 3791365 . - 0 ID=cds-WP_004849595.1;Parent=gene-PHA56_RS18090;Dbxref=Genbank:WP_004849595.1;Name=WP_004849595.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004849595.1;locus_tag=PHA56_RS18090;product=RamA family antibiotic efflux transcriptional regulator;protein_id=WP_004849595.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3791456 3792046 . - . ID=gene-PHA56_RS18095;Name=PHA56_RS18095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS18095;old_locus_tag=PHA56_18095 NZ_CP116214.1 Protein Homology CDS 3791456 3792046 . - 0 ID=cds-WP_038424280.1;Parent=gene-PHA56_RS18095;Dbxref=Genbank:WP_038424280.1;Name=WP_038424280.1;Ontology_term=GO:0045892;gbkey=CDS;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014228702.1;locus_tag=PHA56_RS18095;product=TetR/AcrR family transcriptional regulator C-terminal domain-containing protein;protein_id=WP_038424280.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3792211 3793647 . + . ID=gene-PHA56_RS18100;Name=PHA56_RS18100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS18100;old_locus_tag=PHA56_18100 NZ_CP116214.1 Protein Homology CDS 3792211 3793647 . + 0 ID=cds-WP_014228701.1;Parent=gene-PHA56_RS18100;Dbxref=Genbank:WP_014228701.1;Name=WP_014228701.1;Ontology_term=GO:0006855,GO:0009410,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_process=xenobiotic transmembrane transport|0006855||IEA,response to xenobiotic stimulus|0009410||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014228701.1;locus_tag=PHA56_RS18100;product=DHA2 family efflux MFS transporter permease subunit;protein_id=WP_014228701.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3793812 3794597 . - . ID=gene-PHA56_RS18105;Name=PHA56_RS18105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS18105;old_locus_tag=PHA56_18105 NZ_CP116214.1 Protein Homology CDS 3793812 3794597 . - 0 ID=cds-WP_119834481.1;Parent=gene-PHA56_RS18105;Dbxref=Genbank:WP_119834481.1;Name=WP_119834481.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008807662.1;locus_tag=PHA56_RS18105;product=SDR family oxidoreductase;protein_id=WP_119834481.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3794649 3795545 . - . ID=gene-PHA56_RS18110;Name=PHA56_RS18110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS18110;old_locus_tag=PHA56_18110 NZ_CP116214.1 Protein Homology CDS 3794649 3795545 . - 0 ID=cds-WP_014228699.1;Parent=gene-PHA56_RS18110;Dbxref=Genbank:WP_014228699.1;Name=WP_014228699.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014838004.1;locus_tag=PHA56_RS18110;product=GntR family transcriptional regulator;protein_id=WP_014228699.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3795736 3796548 . + . ID=gene-PHA56_RS18115;Name=PHA56_RS18115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS18115;old_locus_tag=PHA56_18115 NZ_CP116214.1 Protein Homology CDS 3795736 3796548 . + 0 ID=cds-WP_014228697.1;Parent=gene-PHA56_RS18115;Dbxref=Genbank:WP_014228697.1;Name=WP_014228697.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004131076.1;locus_tag=PHA56_RS18115;product=ABC transporter substrate-binding protein;protein_id=WP_014228697.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3796577 3797302 . + . ID=gene-PHA56_RS18120;Name=PHA56_RS18120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS18120;old_locus_tag=PHA56_18120 NZ_CP116214.1 Protein Homology CDS 3796577 3797302 . + 0 ID=cds-WP_025106181.1;Parent=gene-PHA56_RS18120;Dbxref=Genbank:WP_025106181.1;Name=WP_025106181.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004131075.1;locus_tag=PHA56_RS18120;product=amino acid ABC transporter permease;protein_id=WP_025106181.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3797299 3798039 . + . ID=gene-PHA56_RS18125;Name=PHA56_RS18125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS18125;old_locus_tag=PHA56_18125 NZ_CP116214.1 Protein Homology CDS 3797299 3798039 . + 0 ID=cds-WP_004849580.1;Parent=gene-PHA56_RS18125;Dbxref=Genbank:WP_004849580.1;Name=WP_004849580.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012968502.1;locus_tag=PHA56_RS18125;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_004849580.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3798053 3799228 . + . ID=gene-PHA56_RS18130;Name=PHA56_RS18130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS18130;old_locus_tag=PHA56_18130 NZ_CP116214.1 Protein Homology CDS 3798053 3799228 . + 0 ID=cds-WP_032693371.1;Parent=gene-PHA56_RS18130;Dbxref=Genbank:WP_032693371.1;Name=WP_032693371.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012968503.1;locus_tag=PHA56_RS18130;product=M20 family metallopeptidase;protein_id=WP_032693371.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3799225 3800325 . + . ID=gene-PHA56_RS18135;Name=PHA56_RS18135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS18135;old_locus_tag=PHA56_18135 NZ_CP116214.1 Protein Homology CDS 3799225 3800325 . + 0 ID=cds-WP_038424279.1;Parent=gene-PHA56_RS18135;Dbxref=Genbank:WP_038424279.1;Name=WP_038424279.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004131069.1;locus_tag=PHA56_RS18135;product=mandelate racemase/muconate lactonizing enzyme family protein;protein_id=WP_038424279.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3800312 3801481 . + . ID=gene-PHA56_RS18140;Name=PHA56_RS18140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS18140;old_locus_tag=PHA56_18140 NZ_CP116214.1 Protein Homology CDS 3800312 3801481 . + 0 ID=cds-WP_038424278.1;Parent=gene-PHA56_RS18140;Dbxref=Genbank:WP_038424278.1;Name=WP_038424278.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009651953.1;locus_tag=PHA56_RS18140;product=Xaa-Pro peptidase family protein;protein_id=WP_038424278.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3801492 3802415 . + . ID=gene-PHA56_RS18145;Name=PHA56_RS18145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS18145;old_locus_tag=PHA56_18145 NZ_CP116214.1 Protein Homology CDS 3801492 3802415 . + 0 ID=cds-WP_032721001.1;Parent=gene-PHA56_RS18145;Dbxref=Genbank:WP_032721001.1;Name=WP_032721001.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014228692.1;locus_tag=PHA56_RS18145;product=dihydrodipicolinate synthase family protein;protein_id=WP_032721001.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3802399 3803496 . - . ID=gene-PHA56_RS18150;Name=PHA56_RS18150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS18150;old_locus_tag=PHA56_18150 NZ_CP116214.1 Protein Homology CDS 3802399 3803496 . - 0 ID=cds-WP_014228691.1;Parent=gene-PHA56_RS18150;Dbxref=Genbank:WP_014228691.1;Name=WP_014228691.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009651926.1;locus_tag=PHA56_RS18150;product=hypothetical protein;protein_id=WP_014228691.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3803565 3804773 . + . ID=gene-PHA56_RS18155;Name=PHA56_RS18155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS18155;old_locus_tag=PHA56_18155 NZ_CP116214.1 Protein Homology CDS 3803565 3804773 . + 0 ID=cds-WP_014228690.1;Parent=gene-PHA56_RS18155;Dbxref=Genbank:WP_014228690.1;Name=WP_014228690.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016160706.1;locus_tag=PHA56_RS18155;product=pyridoxal phosphate-dependent aminotransferase;protein_id=WP_014228690.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3805098 3805829 . + . ID=gene-PHA56_RS18160;Name=PHA56_RS18160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS18160;old_locus_tag=PHA56_18160 NZ_CP116214.1 Protein Homology CDS 3805098 3805829 . + 0 ID=cds-WP_014228689.1;Parent=gene-PHA56_RS18160;Dbxref=Genbank:WP_014228689.1;Name=WP_014228689.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000647589.1;locus_tag=PHA56_RS18160;product=GntR family transcriptional regulator;protein_id=WP_014228689.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3805826 3806263 . + . ID=gene-PHA56_RS18165;Name=PHA56_RS18165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS18165;old_locus_tag=PHA56_18165 NZ_CP116214.1 Protein Homology CDS 3805826 3806263 . + 0 ID=cds-WP_014228688.1;Parent=gene-PHA56_RS18165;Dbxref=Genbank:WP_014228688.1;Name=WP_014228688.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006820014.1;locus_tag=PHA56_RS18165;product=PTS fructose transporter subunit IIA;protein_id=WP_014228688.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3806267 3807049 . + . ID=gene-PHA56_RS18170;Name=PHA56_RS18170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS18170;old_locus_tag=PHA56_18170 NZ_CP116214.1 Protein Homology CDS 3806267 3807049 . + 0 ID=cds-WP_014228687.1;Parent=gene-PHA56_RS18170;Dbxref=Genbank:WP_014228687.1;Name=WP_014228687.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000400001.1;locus_tag=PHA56_RS18170;product=PTS sugar transporter subunit IIC;protein_id=WP_014228687.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3807042 3807821 . + . ID=gene-PHA56_RS18175;Name=PHA56_RS18175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS18175;old_locus_tag=PHA56_18175 NZ_CP116214.1 Protein Homology CDS 3807042 3807821 . + 0 ID=cds-WP_014228686.1;Parent=gene-PHA56_RS18175;Dbxref=Genbank:WP_014228686.1;Name=WP_014228686.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014837996.1;locus_tag=PHA56_RS18175;product=PTS system mannose/fructose/sorbose family transporter subunit IID;protein_id=WP_014228686.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3807849 3808340 . + . ID=gene-PHA56_RS18180;Name=PHA56_RS18180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS18180;old_locus_tag=PHA56_18180 NZ_CP116214.1 Protein Homology CDS 3807849 3808340 . + 0 ID=cds-WP_014228685.1;Parent=gene-PHA56_RS18180;Dbxref=Genbank:WP_014228685.1;Name=WP_014228685.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006820011.1;locus_tag=PHA56_RS18180;product=PTS sugar transporter subunit IIB;protein_id=WP_014228685.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3808344 3809048 . + . ID=gene-PHA56_RS18185;Name=PHA56_RS18185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS18185;old_locus_tag=PHA56_18185 NZ_CP116214.1 Protein Homology CDS 3808344 3809048 . + 0 ID=cds-WP_014228684.1;Parent=gene-PHA56_RS18185;Dbxref=Genbank:WP_014228684.1;Name=WP_014228684.1;Ontology_term=GO:1901135,GO:0097367;gbkey=CDS;go_function=carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006820010.1;locus_tag=PHA56_RS18185;product=sugar isomerase domain-containing protein;protein_id=WP_014228684.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3809058 3810224 . + . ID=gene-PHA56_RS18190;Name=PHA56_RS18190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS18190;old_locus_tag=PHA56_18190 NZ_CP116214.1 Protein Homology CDS 3809058 3810224 . + 0 ID=cds-WP_014228683.1;Parent=gene-PHA56_RS18190;Dbxref=Genbank:WP_014228683.1;Name=WP_014228683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014837993.1;locus_tag=PHA56_RS18190;product=glycoside hydrolase family 88 protein;protein_id=WP_014228683.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3810227 3810979 . + . ID=gene-PHA56_RS18195;Name=PHA56_RS18195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS18195;old_locus_tag=PHA56_18195 NZ_CP116214.1 Protein Homology CDS 3810227 3810979 . + 0 ID=cds-WP_224360082.1;Parent=gene-PHA56_RS18195;Dbxref=Genbank:WP_224360082.1;Name=WP_224360082.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014837992.1;locus_tag=PHA56_RS18195;product=SIS domain-containing protein;protein_id=WP_224360082.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3811030 3812442 . + . ID=gene-PHA56_RS18200;Name=PHA56_RS18200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS18200;old_locus_tag=PHA56_18200 NZ_CP116214.1 Protein Homology CDS 3811030 3812442 . + 0 ID=cds-WP_014228681.1;Parent=gene-PHA56_RS18200;Dbxref=Genbank:WP_014228681.1;Name=WP_014228681.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014228681.1;locus_tag=PHA56_RS18200;product=OprD family outer membrane porin;protein_id=WP_014228681.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3812883 3814175 . + . ID=gene-PHA56_RS18205;Name=PHA56_RS18205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS18205;old_locus_tag=PHA56_18205 NZ_CP116214.1 Protein Homology CDS 3812883 3814175 . + 0 ID=cds-WP_119834482.1;Parent=gene-PHA56_RS18205;Dbxref=Genbank:WP_119834482.1;Name=WP_119834482.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014228680.1;locus_tag=PHA56_RS18205;product=haloacid dehalogenase-like hydrolase;protein_id=WP_119834482.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3814354 3814441 . - . ID=gene-PHA56_RS18210;Name=PHA56_RS18210;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA56_RS18210;old_locus_tag=PHA56_18210 NZ_CP116214.1 tRNAscan-SE tRNA 3814354 3814441 . - . ID=rna-PHA56_RS18210;Parent=gene-PHA56_RS18210;anticodon=(pos:complement(3814405..3814407));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS18210;product=tRNA-Ser NZ_CP116214.1 tRNAscan-SE exon 3814354 3814441 . - . ID=exon-PHA56_RS18210-1;Parent=rna-PHA56_RS18210;anticodon=(pos:complement(3814405..3814407));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS18210;product=tRNA-Ser NZ_CP116214.1 RefSeq gene 3814583 3816211 . - . ID=gene-PHA56_RS18215;Name=PHA56_RS18215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS18215;old_locus_tag=PHA56_18215 NZ_CP116214.1 Protein Homology CDS 3814583 3816211 . - 0 ID=cds-WP_014228678.1;Parent=gene-PHA56_RS18215;Dbxref=Genbank:WP_014228678.1;Name=WP_014228678.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015584707.1;locus_tag=PHA56_RS18215;product=ABC transporter substrate-binding protein;protein_id=WP_014228678.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3816479 3817138 . + . ID=gene-PHA56_RS18220;Name=yccA;gbkey=Gene;gene=yccA;gene_biotype=protein_coding;locus_tag=PHA56_RS18220;old_locus_tag=PHA56_18220 NZ_CP116214.1 Protein Homology CDS 3816479 3817138 . + 0 ID=cds-WP_004100829.1;Parent=gene-PHA56_RS18220;Dbxref=Genbank:WP_004100829.1;Name=WP_004100829.1;gbkey=CDS;gene=yccA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000375124.1;locus_tag=PHA56_RS18220;product=FtsH protease modulator YccA;protein_id=WP_004100829.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3817227 3817556 . + . ID=gene-PHA56_RS18225;Name=tusE;gbkey=Gene;gene=tusE;gene_biotype=protein_coding;locus_tag=PHA56_RS18225;old_locus_tag=PHA56_18225 NZ_CP116214.1 Protein Homology CDS 3817227 3817556 . + 0 ID=cds-WP_004849563.1;Parent=gene-PHA56_RS18225;Dbxref=Genbank:WP_004849563.1;Name=WP_004849563.1;gbkey=CDS;gene=tusE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226178.1;locus_tag=PHA56_RS18225;product=sulfurtransferase TusE;protein_id=WP_004849563.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3817553 3817834 . - . ID=gene-PHA56_RS18230;Name=yccX;gbkey=Gene;gene=yccX;gene_biotype=protein_coding;locus_tag=PHA56_RS18230;old_locus_tag=PHA56_18230 NZ_CP116214.1 Protein Homology CDS 3817553 3817834 . - 0 ID=cds-WP_004849561.1;Parent=gene-PHA56_RS18230;Dbxref=Genbank:WP_004849561.1;Name=WP_004849561.1;Ontology_term=GO:0003998;gbkey=CDS;gene=yccX;go_function=acylphosphatase activity|0003998||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226177.1;locus_tag=PHA56_RS18230;product=acylphosphatase;protein_id=WP_004849561.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3817884 3818672 . - . ID=gene-PHA56_RS18235;Name=PHA56_RS18235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS18235;old_locus_tag=PHA56_18235 NZ_CP116214.1 Protein Homology CDS 3817884 3818672 . - 0 ID=cds-WP_014837988.1;Parent=gene-PHA56_RS18235;Dbxref=Genbank:WP_014837988.1;Name=WP_014837988.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226176.1;locus_tag=PHA56_RS18235;product=helix-turn-helix domain-containing protein;protein_id=WP_014837988.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3818689 3819243 . - . ID=gene-PHA56_RS18240;Name=PHA56_RS18240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS18240;old_locus_tag=PHA56_18240 NZ_CP116214.1 Protein Homology CDS 3818689 3819243 . - 0 ID=cds-WP_014228676.1;Parent=gene-PHA56_RS18240;Dbxref=Genbank:WP_014228676.1;Name=WP_014228676.1;Ontology_term=GO:0008150,GO:0003674,GO:0005575;gbkey=CDS;go_component=cellular_component|0005575||IEA;go_function=molecular_function|0003674||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226175.1;locus_tag=PHA56_RS18240;product=YbhB/YbcL family Raf kinase inhibitor-like protein;protein_id=WP_014228676.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3819435 3820637 . + . ID=gene-PHA56_RS18245;Name=rlmI;gbkey=Gene;gene=rlmI;gene_biotype=protein_coding;locus_tag=PHA56_RS18245;old_locus_tag=PHA56_18245 NZ_CP116214.1 Protein Homology CDS 3819435 3820637 . + 0 ID=cds-WP_009651924.1;Parent=gene-PHA56_RS18245;Dbxref=Genbank:WP_009651924.1;Name=WP_009651924.1;Ontology_term=GO:0003723,GO:0008649;gbkey=CDS;gene=rlmI;go_function=RNA binding|0003723||IEA,rRNA methyltransferase activity|0008649||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460054.1;locus_tag=PHA56_RS18245;product=23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI;protein_id=WP_009651924.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3820698 3821015 . + . ID=gene-PHA56_RS18250;Name=hspQ;gbkey=Gene;gene=hspQ;gene_biotype=protein_coding;locus_tag=PHA56_RS18250;old_locus_tag=PHA56_18250 NZ_CP116214.1 Protein Homology CDS 3820698 3821015 . + 0 ID=cds-WP_009651933.1;Parent=gene-PHA56_RS18250;Dbxref=Genbank:WP_009651933.1;Name=WP_009651933.1;gbkey=CDS;gene=hspQ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226173.1;locus_tag=PHA56_RS18250;product=heat shock protein HspQ;protein_id=WP_009651933.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3821474 3822175 . + . ID=gene-PHA56_RS18255;Name=PHA56_RS18255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS18255;old_locus_tag=PHA56_18255 NZ_CP116214.1 Protein Homology CDS 3821474 3822175 . + 0 ID=cds-WP_014228675.1;Parent=gene-PHA56_RS18255;Dbxref=Genbank:WP_014228675.1;Name=WP_014228675.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009651930.1;locus_tag=PHA56_RS18255;product=helix-turn-helix domain-containing protein;protein_id=WP_014228675.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3822189 3823127 . - . ID=gene-PHA56_RS18260;Name=PHA56_RS18260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS18260;old_locus_tag=PHA56_18260 NZ_CP116214.1 Protein Homology CDS 3822189 3823127 . - 0 ID=cds-WP_014228674.1;Parent=gene-PHA56_RS18260;Dbxref=Genbank:WP_014228674.1;Name=WP_014228674.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014837987.1;locus_tag=PHA56_RS18260;product=peptidase;protein_id=WP_014228674.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3823170 3826313 . - . ID=gene-PHA56_RS18265;Name=PHA56_RS18265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS18265;old_locus_tag=PHA56_18265 NZ_CP116214.1 Protein Homology CDS 3823170 3826313 . - 0 ID=cds-WP_014228673.1;Parent=gene-PHA56_RS18265;Dbxref=Genbank:WP_014228673.1;Name=WP_014228673.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014228673.1;locus_tag=PHA56_RS18265;product=glycosyltransferase;protein_id=WP_014228673.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3826511 3827716 . - . ID=gene-PHA56_RS18270;Name=PHA56_RS18270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS18270;old_locus_tag=PHA56_18270 NZ_CP116214.1 Protein Homology CDS 3826511 3827716 . - 0 ID=cds-WP_014228672.1;Parent=gene-PHA56_RS18270;Dbxref=Genbank:WP_014228672.1;Name=WP_014228672.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004111917.1;locus_tag=PHA56_RS18270;product=HlyD family efflux transporter periplasmic adaptor subunit;protein_id=WP_014228672.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3827713 3829860 . - . ID=gene-PHA56_RS18275;Name=PHA56_RS18275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS18275;old_locus_tag=PHA56_18275 NZ_CP116214.1 Protein Homology CDS 3827713 3829860 . - 0 ID=cds-WP_004849540.1;Parent=gene-PHA56_RS18275;Dbxref=Genbank:WP_004849540.1;Name=WP_004849540.1;Ontology_term=GO:0055085,GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012068525.1;locus_tag=PHA56_RS18275;product=type I secretion system permease/ATPase;protein_id=WP_004849540.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3829857 3831293 . - . ID=gene-PHA56_RS18280;Name=PHA56_RS18280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS18280;old_locus_tag=PHA56_18280 NZ_CP116214.1 Protein Homology CDS 3829857 3831293 . - 0 ID=cds-WP_014228671.1;Parent=gene-PHA56_RS18280;Dbxref=Genbank:WP_014228671.1;Name=WP_014228671.1;Ontology_term=GO:0006810,GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004179227.1;locus_tag=PHA56_RS18280;product=TolC family outer membrane protein;protein_id=WP_014228671.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3831461 3834232 . - . ID=gene-PHA56_RS18285;Name=PHA56_RS18285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS18285;old_locus_tag=PHA56_18285 NZ_CP116214.1 Protein Homology CDS 3831461 3834232 . - 0 ID=cds-WP_271292926.1;Parent=gene-PHA56_RS18285;Dbxref=Genbank:WP_271292926.1;Name=WP_271292926.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004195823.1;locus_tag=PHA56_RS18285;product=type I secretion C-terminal target domain-containing protein;protein_id=WP_271292926.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3834399 3834968 . + . ID=gene-PHA56_RS18290;Name=PHA56_RS18290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS18290;old_locus_tag=PHA56_18290 NZ_CP116214.1 GeneMarkS-2+ CDS 3834399 3834968 . + 0 ID=cds-WP_271292927.1;Parent=gene-PHA56_RS18290;Dbxref=Genbank:WP_271292927.1;Name=WP_271292927.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PHA56_RS18290;product=hypothetical protein;protein_id=WP_271292927.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3835043 3836244 . + . ID=gene-PHA56_RS18295;Name=PHA56_RS18295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS18295;old_locus_tag=PHA56_18295 NZ_CP116214.1 Protein Homology CDS 3835043 3835358 . + 0 ID=cds-WP_096913407.1-2;Parent=gene-PHA56_RS18295;Dbxref=Genbank:WP_096913407.1;Name=WP_096913407.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558215.1;locus_tag=PHA56_RS18295;product=IS3 family transposase;protein_id=WP_096913407.1;transl_table=11 NZ_CP116214.1 Protein Homology CDS 3835358 3836244 . + 2 ID=cds-WP_096913407.1-2;Parent=gene-PHA56_RS18295;Dbxref=Genbank:WP_096913407.1;Name=WP_096913407.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558215.1;locus_tag=PHA56_RS18295;product=IS3 family transposase;protein_id=WP_096913407.1;transl_table=11 NZ_CP116214.1 RefSeq pseudogene 3836503 3837179 . + . ID=gene-PHA56_RS18300;Name=PHA56_RS18300;end_range=3837179,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS18300;old_locus_tag=PHA56_18300;partial=true;pseudo=true NZ_CP116214.1 Protein Homology CDS 3836503 3837179 . + 0 ID=cds-PHA56_RS18300;Parent=gene-PHA56_RS18300;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=3837179,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612175.1;locus_tag=PHA56_RS18300;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP116214.1 RefSeq gene 3837210 3838330 . - . ID=gene-PHA56_RS18305;Name=PHA56_RS18305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS18305;old_locus_tag=PHA56_18305 NZ_CP116214.1 Protein Homology CDS 3838072 3838330 . - 0 ID=cds-WP_085956072.1-4;Parent=gene-PHA56_RS18305;Dbxref=Genbank:WP_085956072.1;Name=WP_085956072.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611473.1;locus_tag=PHA56_RS18305;product=IS3-like element ISKpn34 family transposase;protein_id=WP_085956072.1;transl_table=11 NZ_CP116214.1 Protein Homology CDS 3837210 3838072 . - 2 ID=cds-WP_085956072.1-4;Parent=gene-PHA56_RS18305;Dbxref=Genbank:WP_085956072.1;Name=WP_085956072.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611473.1;locus_tag=PHA56_RS18305;product=IS3-like element ISKpn34 family transposase;protein_id=WP_085956072.1;transl_table=11 NZ_CP116214.1 RefSeq pseudogene 3838402 3838956 . + . ID=gene-PHA56_RS18310;Name=PHA56_RS18310;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS18310;old_locus_tag=PHA56_18310;partial=true;pseudo=true;start_range=.,3838402 NZ_CP116214.1 Protein Homology CDS 3838402 3838956 . + 0 ID=cds-PHA56_RS18310;Parent=gene-PHA56_RS18310;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611434.1;locus_tag=PHA56_RS18310;partial=true;product=DDE-type integrase/transposase/recombinase;pseudo=true;start_range=.,3838402;transl_table=11 NZ_CP116214.1 RefSeq gene 3838927 3841410 . - . ID=gene-PHA56_RS18315;Name=PHA56_RS18315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS18315;old_locus_tag=PHA56_18315 NZ_CP116214.1 Protein Homology CDS 3838927 3841410 . - 0 ID=cds-WP_271292928.1;Parent=gene-PHA56_RS18315;Dbxref=Genbank:WP_271292928.1;Name=WP_271292928.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020079235.1;locus_tag=PHA56_RS18315;product=hypothetical protein;protein_id=WP_271292928.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3841421 3842649 . + . ID=gene-PHA56_RS18320;Name=PHA56_RS18320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS18320;old_locus_tag=PHA56_18320 NZ_CP116214.1 Protein Homology CDS 3841421 3841736 . + 0 ID=cds-WP_104159316.1-3;Parent=gene-PHA56_RS18320;Dbxref=Genbank:WP_104159316.1;Name=WP_104159316.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558215.1;locus_tag=PHA56_RS18320;product=IS3 family transposase;protein_id=WP_104159316.1;transl_table=11 NZ_CP116214.1 Protein Homology CDS 3841736 3842649 . + 2 ID=cds-WP_104159316.1-3;Parent=gene-PHA56_RS18320;Dbxref=Genbank:WP_104159316.1;Name=WP_104159316.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558215.1;locus_tag=PHA56_RS18320;product=IS3 family transposase;protein_id=WP_104159316.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3843862 3845063 . - . ID=gene-PHA56_RS18325;Name=PHA56_RS18325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS18325;old_locus_tag=PHA56_18325 NZ_CP116214.1 Protein Homology CDS 3844748 3845063 . - 0 ID=cds-WP_096913407.1-3;Parent=gene-PHA56_RS18325;Dbxref=Genbank:WP_096913407.1;Name=WP_096913407.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558215.1;locus_tag=PHA56_RS18325;product=IS3 family transposase;protein_id=WP_096913407.1;transl_table=11 NZ_CP116214.1 Protein Homology CDS 3843862 3844748 . - 2 ID=cds-WP_096913407.1-3;Parent=gene-PHA56_RS18325;Dbxref=Genbank:WP_096913407.1;Name=WP_096913407.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558215.1;locus_tag=PHA56_RS18325;product=IS3 family transposase;protein_id=WP_096913407.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3845262 3846490 . + . ID=gene-PHA56_RS18330;Name=PHA56_RS18330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS18330;old_locus_tag=PHA56_18330 NZ_CP116214.1 Protein Homology CDS 3845262 3845577 . + 0 ID=cds-WP_104159316.1-4;Parent=gene-PHA56_RS18330;Dbxref=Genbank:WP_104159316.1;Name=WP_104159316.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558215.1;locus_tag=PHA56_RS18330;product=IS3 family transposase;protein_id=WP_104159316.1;transl_table=11 NZ_CP116214.1 Protein Homology CDS 3845577 3846490 . + 2 ID=cds-WP_104159316.1-4;Parent=gene-PHA56_RS18330;Dbxref=Genbank:WP_104159316.1;Name=WP_104159316.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558215.1;locus_tag=PHA56_RS18330;product=IS3 family transposase;protein_id=WP_104159316.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3846415 3846969 . - . ID=gene-PHA56_RS18335;Name=PHA56_RS18335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS18335;old_locus_tag=PHA56_18335 NZ_CP116214.1 Protein Homology CDS 3846415 3846969 . - 0 ID=cds-WP_271292929.1;Parent=gene-PHA56_RS18335;Dbxref=Genbank:WP_271292929.1;Name=WP_271292929.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033677.1;locus_tag=PHA56_RS18335;product=BapA prefix-like domain-containing protein;protein_id=WP_271292929.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3847676 3848656 . - . ID=gene-PHA56_RS18340;Name=PHA56_RS18340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS18340;old_locus_tag=PHA56_18340 NZ_CP116214.1 Protein Homology CDS 3847676 3848656 . - 0 ID=cds-WP_000019473.1-2;Parent=gene-PHA56_RS18340;Dbxref=Genbank:WP_000019473.1;Name=WP_000019473.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000019445.1;locus_tag=PHA56_RS18340;product=IS5-like element ISKpn26 family transposase;protein_id=WP_000019473.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3848772 3849185 . - . ID=gene-PHA56_RS18345;Name=PHA56_RS18345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS18345;old_locus_tag=PHA56_18345 NZ_CP116214.1 Protein Homology CDS 3848772 3849185 . - 0 ID=cds-WP_014228669.1;Parent=gene-PHA56_RS18345;Dbxref=Genbank:WP_014228669.1;Name=WP_014228669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226172.1;locus_tag=PHA56_RS18345;product=CoA-binding protein;protein_id=WP_014228669.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3849340 3849798 . + . ID=gene-PHA56_RS18350;Name=mgsA;gbkey=Gene;gene=mgsA;gene_biotype=protein_coding;locus_tag=PHA56_RS18350;old_locus_tag=PHA56_18350 NZ_CP116214.1 Protein Homology CDS 3849340 3849798 . + 0 ID=cds-WP_014228668.1;Parent=gene-PHA56_RS18350;Dbxref=Genbank:WP_014228668.1;Name=WP_014228668.1;Ontology_term=GO:0006007,GO:0019242,GO:0008929;gbkey=CDS;gene=mgsA;go_function=methylglyoxal synthase activity|0008929||IEA;go_process=glucose catabolic process|0006007||IEA,methylglyoxal biosynthetic process|0019242||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415483.2;locus_tag=PHA56_RS18350;product=methylglyoxal synthase;protein_id=WP_014228668.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3849827 3851881 . - . ID=gene-PHA56_RS18355;Name=helD;gbkey=Gene;gene=helD;gene_biotype=protein_coding;locus_tag=PHA56_RS18355;old_locus_tag=PHA56_18355 NZ_CP116214.1 Protein Homology CDS 3849827 3851881 . - 0 ID=cds-WP_038424275.1;Parent=gene-PHA56_RS18355;Dbxref=Genbank:WP_038424275.1;Name=WP_038424275.1;Ontology_term=GO:0003677,GO:0003678,GO:0005524;gbkey=CDS;gene=helD;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226170.1;locus_tag=PHA56_RS18355;product=DNA helicase IV;protein_id=WP_038424275.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3852004 3852450 . + . ID=gene-PHA56_RS18360;Name=PHA56_RS18360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS18360;old_locus_tag=PHA56_18360 NZ_CP116214.1 Protein Homology CDS 3852004 3852450 . + 0 ID=cds-WP_004849527.1;Parent=gene-PHA56_RS18360;Dbxref=Genbank:WP_004849527.1;Name=WP_004849527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415481.1;locus_tag=PHA56_RS18360;product=YccF domain-containing protein;protein_id=WP_004849527.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3852468 3854603 . + . ID=gene-PHA56_RS18365;Name=yccS;gbkey=Gene;gene=yccS;gene_biotype=protein_coding;locus_tag=PHA56_RS18365;old_locus_tag=PHA56_18365 NZ_CP116214.1 Protein Homology CDS 3852468 3854603 . + 0 ID=cds-WP_032695057.1;Parent=gene-PHA56_RS18365;Dbxref=Genbank:WP_032695057.1;Name=WP_032695057.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yccS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226168.1;locus_tag=PHA56_RS18365;product=YccS family putative transporter;protein_id=WP_032695057.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3854591 3855214 . - . ID=gene-PHA56_RS18370;Name=PHA56_RS18370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS18370;old_locus_tag=PHA56_18370 NZ_CP116214.1 Protein Homology CDS 3854591 3855214 . - 0 ID=cds-WP_014228665.1;Parent=gene-PHA56_RS18370;Dbxref=Genbank:WP_014228665.1;Name=WP_014228665.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020476643.1;locus_tag=PHA56_RS18370;product=TfoX/Sxy family DNA transformation protein;protein_id=WP_014228665.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3855677 3856186 . + . ID=gene-PHA56_RS18375;Name=sulA;gbkey=Gene;gene=sulA;gene_biotype=protein_coding;locus_tag=PHA56_RS18375;old_locus_tag=PHA56_18375 NZ_CP116214.1 Protein Homology CDS 3855677 3856186 . + 0 ID=cds-WP_014228664.1;Parent=gene-PHA56_RS18375;Dbxref=Genbank:WP_014228664.1;Name=WP_014228664.1;gbkey=CDS;gene=sulA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226166.1;locus_tag=PHA56_RS18375;product=cell division inhibitor SulA;protein_id=WP_014228664.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3856540 3857610 . + . ID=gene-PHA56_RS18380;Name=ompA;gbkey=Gene;gene=ompA;gene_biotype=protein_coding;locus_tag=PHA56_RS18380;old_locus_tag=PHA56_18380 NZ_CP116214.1 Protein Homology CDS 3856540 3857610 . + 0 ID=cds-WP_004849520.1;Parent=gene-PHA56_RS18380;Dbxref=Genbank:WP_004849520.1;Name=WP_004849520.1;gbkey=CDS;gene=ompA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309068.1;locus_tag=PHA56_RS18380;product=porin OmpA;protein_id=WP_004849520.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3857713 3858165 . - . ID=gene-PHA56_RS18385;Name=matP;gbkey=Gene;gene=matP;gene_biotype=protein_coding;locus_tag=PHA56_RS18385;old_locus_tag=PHA56_18385 NZ_CP116214.1 Protein Homology CDS 3857713 3858165 . - 0 ID=cds-WP_014228663.1;Parent=gene-PHA56_RS18385;Dbxref=Genbank:WP_014228663.1;Name=WP_014228663.1;Ontology_term=GO:0006355,GO:0043565;gbkey=CDS;gene=matP;go_function=sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226164.1;locus_tag=PHA56_RS18385;product=macrodomain Ter protein MatP;protein_id=WP_014228663.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3858351 3860108 . + . ID=gene-PHA56_RS18390;Name=PHA56_RS18390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS18390;old_locus_tag=PHA56_18390 NZ_CP116214.1 Protein Homology CDS 3858351 3860108 . + 0 ID=cds-WP_014228662.1;Parent=gene-PHA56_RS18390;Dbxref=Genbank:WP_014228662.1;Name=WP_014228662.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226163.1;locus_tag=PHA56_RS18390;product=Lon protease family protein;protein_id=WP_014228662.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3860178 3860696 . + . ID=gene-PHA56_RS18395;Name=fabA;gbkey=Gene;gene=fabA;gene_biotype=protein_coding;locus_tag=PHA56_RS18395;old_locus_tag=PHA56_18395 NZ_CP116214.1 Protein Homology CDS 3860178 3860696 . + 0 ID=cds-WP_004849514.1;Parent=gene-PHA56_RS18395;Dbxref=Genbank:WP_004849514.1;Name=WP_004849514.1;Ontology_term=GO:0006633,GO:0008693;gbkey=CDS;gene=fabA;go_function=3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase activity|0008693||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014915875.1;locus_tag=PHA56_RS18395;product=bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase;protein_id=WP_004849514.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3860761 3860928 . - . ID=gene-PHA56_RS18400;Name=rmf;gbkey=Gene;gene=rmf;gene_biotype=protein_coding;locus_tag=PHA56_RS18400;old_locus_tag=PHA56_18400 NZ_CP116214.1 Protein Homology CDS 3860761 3860928 . - 0 ID=cds-WP_004100764.1;Parent=gene-PHA56_RS18400;Dbxref=Genbank:WP_004100764.1;Name=WP_004100764.1;gbkey=CDS;gene=rmf;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460040.1;locus_tag=PHA56_RS18400;product=ribosome modulation factor;protein_id=WP_004100764.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3861184 3861747 . - . ID=gene-PHA56_RS18405;Name=pqiC;gbkey=Gene;gene=pqiC;gene_biotype=protein_coding;locus_tag=PHA56_RS18405;old_locus_tag=PHA56_18405 NZ_CP116214.1 Protein Homology CDS 3861184 3861747 . - 0 ID=cds-WP_004849513.1;Parent=gene-PHA56_RS18405;Dbxref=Genbank:WP_004849513.1;Name=WP_004849513.1;gbkey=CDS;gene=pqiC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226161.1;locus_tag=PHA56_RS18405;product=membrane integrity-associated transporter subunit PqiC;protein_id=WP_004849513.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3861747 3863384 . - . ID=gene-PHA56_RS18410;Name=pqiB;gbkey=Gene;gene=pqiB;gene_biotype=protein_coding;locus_tag=PHA56_RS18410;old_locus_tag=PHA56_18410 NZ_CP116214.1 Protein Homology CDS 3861747 3863384 . - 0 ID=cds-WP_271292930.1;Parent=gene-PHA56_RS18410;Dbxref=Genbank:WP_271292930.1;Name=WP_271292930.1;gbkey=CDS;gene=pqiB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226160.1;locus_tag=PHA56_RS18410;product=intermembrane transport protein PqiB;protein_id=WP_271292930.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3863374 3864642 . - . ID=gene-PHA56_RS18415;Name=pqiA;gbkey=Gene;gene=pqiA;gene_biotype=protein_coding;locus_tag=PHA56_RS18415;old_locus_tag=PHA56_18415 NZ_CP116214.1 Protein Homology CDS 3863374 3864642 . - 0 ID=cds-WP_032720968.1;Parent=gene-PHA56_RS18415;Dbxref=Genbank:WP_032720968.1;Name=WP_032720968.1;gbkey=CDS;gene=pqiA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004183570.1;locus_tag=PHA56_RS18415;product=membrane integrity-associated transporter subunit PqiA;protein_id=WP_032720968.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3864657 3866564 . - . ID=gene-PHA56_RS18420;Name=PHA56_RS18420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS18420;old_locus_tag=PHA56_18420 NZ_CP116214.1 Protein Homology CDS 3864657 3866564 . - 0 ID=cds-WP_038424274.1;Parent=gene-PHA56_RS18420;Dbxref=Genbank:WP_038424274.1;Name=WP_038424274.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000053132.1;locus_tag=PHA56_RS18420;product=ABC transporter ATP-binding protein;protein_id=WP_038424274.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3866577 3868682 . - . ID=gene-PHA56_RS18425;Name=rlmKL;gbkey=Gene;gene=rlmKL;gene_biotype=protein_coding;locus_tag=PHA56_RS18425;old_locus_tag=PHA56_18425 NZ_CP116214.1 Protein Homology CDS 3866577 3868682 . - 0 ID=cds-WP_014228658.1;Parent=gene-PHA56_RS18425;Dbxref=Genbank:WP_014228658.1;Name=WP_014228658.1;Ontology_term=GO:0031167,GO:0003723,GO:0008990;gbkey=CDS;gene=rlmKL;go_function=RNA binding|0003723||IEA,rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226157.1;locus_tag=PHA56_RS18425;product=bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL;protein_id=WP_014228658.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3868781 3869890 . + . ID=gene-PHA56_RS18430;Name=PHA56_RS18430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS18430;old_locus_tag=PHA56_18430 NZ_CP116214.1 Protein Homology CDS 3868781 3869890 . + 0 ID=cds-WP_038424273.1;Parent=gene-PHA56_RS18430;Dbxref=Genbank:WP_038424273.1;Name=WP_038424273.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226156.1;locus_tag=PHA56_RS18430;product=YcbX family protein;protein_id=WP_038424273.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3869887 3870429 . - . ID=gene-PHA56_RS18435;Name=zapC;gbkey=Gene;gene=zapC;gene_biotype=protein_coding;locus_tag=PHA56_RS18435;old_locus_tag=PHA56_18435 NZ_CP116214.1 Protein Homology CDS 3869887 3870429 . - 0 ID=cds-WP_014837972.1;Parent=gene-PHA56_RS18435;Dbxref=Genbank:WP_014837972.1;Name=WP_014837972.1;gbkey=CDS;gene=zapC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226155.1;locus_tag=PHA56_RS18435;product=cell division protein ZapC;protein_id=WP_014837972.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3870598 3871608 . - . ID=gene-PHA56_RS18440;Name=pyrD;gbkey=Gene;gene=pyrD;gene_biotype=protein_coding;locus_tag=PHA56_RS18440;old_locus_tag=PHA56_18440 NZ_CP116214.1 Protein Homology CDS 3870598 3871608 . - 0 ID=cds-WP_004130996.1;Parent=gene-PHA56_RS18440;Dbxref=Genbank:WP_004130996.1;Name=WP_004130996.1;Ontology_term=GO:0006222,GO:0004152,GO:0016020;gbkey=CDS;gene=pyrD;go_component=membrane|0016020||IEA;go_function=dihydroorotate dehydrogenase activity|0004152||IEA;go_process=UMP biosynthetic process|0006222||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226154.1;locus_tag=PHA56_RS18440;product=quinone-dependent dihydroorotate dehydrogenase;protein_id=WP_004130996.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3871857 3872432 . + . ID=gene-PHA56_RS18445;Name=ssuE;gbkey=Gene;gene=ssuE;gene_biotype=protein_coding;locus_tag=PHA56_RS18445;old_locus_tag=PHA56_18445 NZ_CP116214.1 Protein Homology CDS 3871857 3872432 . + 0 ID=cds-WP_009653287.1;Parent=gene-PHA56_RS18445;Dbxref=Genbank:WP_009653287.1;Name=WP_009653287.1;Ontology_term=GO:0046306,GO:0008752;gbkey=CDS;gene=ssuE;go_function=FMN reductase activity|0008752||IEA;go_process=alkanesulfonate catabolic process|0046306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004849503.1;locus_tag=PHA56_RS18445;product=NADPH-dependent FMN reductase;protein_id=WP_009653287.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3872489 3873280 . + . ID=gene-PHA56_RS18450;Name=ssuC;gbkey=Gene;gene=ssuC;gene_biotype=protein_coding;locus_tag=PHA56_RS18450;old_locus_tag=PHA56_18450 NZ_CP116214.1 Protein Homology CDS 3872489 3873280 . + 0 ID=cds-WP_004849501.1;Parent=gene-PHA56_RS18450;Dbxref=Genbank:WP_004849501.1;Name=WP_004849501.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=ssuC;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004871586.1;locus_tag=PHA56_RS18450;product=aliphatic sulfonate ABC transporter permease SsuC;protein_id=WP_004849501.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3873277 3874050 . + . ID=gene-PHA56_RS18455;Name=ssuB;gbkey=Gene;gene=ssuB;gene_biotype=protein_coding;locus_tag=PHA56_RS18455;old_locus_tag=PHA56_18455 NZ_CP116214.1 Protein Homology CDS 3873277 3874050 . + 0 ID=cds-WP_032695054.1;Parent=gene-PHA56_RS18455;Dbxref=Genbank:WP_032695054.1;Name=WP_032695054.1;Ontology_term=GO:0005524;gbkey=CDS;gene=ssuB;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226149.1;locus_tag=PHA56_RS18455;product=aliphatic sulfonates ABC transporter ATP-binding protein;protein_id=WP_032695054.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3874116 3876731 . - . ID=gene-PHA56_RS18460;Name=pepN;gbkey=Gene;gene=pepN;gene_biotype=protein_coding;locus_tag=PHA56_RS18460;old_locus_tag=PHA56_18460 NZ_CP116214.1 Protein Homology CDS 3874116 3876731 . - 0 ID=cds-WP_119834739.1;Parent=gene-PHA56_RS18460;Dbxref=Genbank:WP_119834739.1;Name=WP_119834739.1;Ontology_term=GO:0006508,GO:0004177,GO:0008237;gbkey=CDS;gene=pepN;go_function=aminopeptidase activity|0004177||IEA,metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000193787.1;locus_tag=PHA56_RS18460;product=aminopeptidase N;protein_id=WP_119834739.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3877059 3878261 . + . ID=gene-PHA56_RS18465;Name=pncB;gbkey=Gene;gene=pncB;gene_biotype=protein_coding;locus_tag=PHA56_RS18465;old_locus_tag=PHA56_18465 NZ_CP116214.1 Protein Homology CDS 3877059 3878261 . + 0 ID=cds-WP_025107499.1;Parent=gene-PHA56_RS18465;Dbxref=Genbank:WP_025107499.1;Name=WP_025107499.1;Ontology_term=GO:0019358,GO:0004516;gbkey=CDS;gene=pncB;go_function=nicotinate phosphoribosyltransferase activity|0004516||IEA;go_process=nicotinate nucleotide salvage|0019358||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226146.1;locus_tag=PHA56_RS18465;product=nicotinate phosphoribosyltransferase;protein_id=WP_025107499.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3878565 3879965 . + . ID=gene-PHA56_RS18470;Name=asnS;gbkey=Gene;gene=asnS;gene_biotype=protein_coding;locus_tag=PHA56_RS18470;old_locus_tag=PHA56_18470 NZ_CP116214.1 Protein Homology CDS 3878565 3879965 . + 0 ID=cds-WP_004849497.1;Parent=gene-PHA56_RS18470;Dbxref=Genbank:WP_004849497.1;Name=WP_004849497.1;Ontology_term=GO:0006421,GO:0004816,GO:0005524;gbkey=CDS;gene=asnS;go_function=asparagine-tRNA ligase activity|0004816||IEA,ATP binding|0005524||IEA;go_process=asparaginyl-tRNA aminoacylation|0006421||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123540.1;locus_tag=PHA56_RS18470;product=asparagine--tRNA ligase;protein_id=WP_004849497.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3880557 3881642 . + . ID=gene-PHA56_RS18475;Name=PHA56_RS18475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS18475;old_locus_tag=PHA56_18475 NZ_CP116214.1 Protein Homology CDS 3880557 3881642 . + 0 ID=cds-WP_014228653.1;Parent=gene-PHA56_RS18475;Dbxref=Genbank:WP_014228653.1;Name=WP_014228653.1;Ontology_term=GO:0015288,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004141771.1;locus_tag=PHA56_RS18475;product=porin;protein_id=WP_014228653.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3881830 3883020 . + . ID=gene-PHA56_RS18480;Name=PHA56_RS18480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS18480;old_locus_tag=PHA56_18480 NZ_CP116214.1 Protein Homology CDS 3881830 3883020 . + 0 ID=cds-WP_009653304.1;Parent=gene-PHA56_RS18480;Dbxref=Genbank:WP_009653304.1;Name=WP_009653304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009653304.1;locus_tag=PHA56_RS18480;product=aspartate/tyrosine/aromatic aminotransferase;protein_id=WP_009653304.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3883112 3883546 . - . ID=gene-PHA56_RS18485;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=PHA56_RS18485;old_locus_tag=PHA56_18485 NZ_CP116214.1 Protein Homology CDS 3883112 3883546 . - 0 ID=cds-WP_014228411.1-3;Parent=gene-PHA56_RS18485;Dbxref=Genbank:WP_014228411.1;Name=WP_014228411.1;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000525033.1;locus_tag=PHA56_RS18485;product=IS200/IS605 family transposase;protein_id=WP_014228411.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3883710 3884357 . - . ID=gene-PHA56_RS18490;Name=PHA56_RS18490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS18490;old_locus_tag=PHA56_18490 NZ_CP116214.1 Protein Homology CDS 3883710 3884357 . - 0 ID=cds-WP_014837967.1;Parent=gene-PHA56_RS18490;Dbxref=Genbank:WP_014837967.1;Name=WP_014837967.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003035823.1;locus_tag=PHA56_RS18490;product=MBL fold metallo-hydrolase;protein_id=WP_014837967.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3884371 3884922 . - . ID=gene-PHA56_RS18495;Name=PHA56_RS18495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS18495;old_locus_tag=PHA56_18495 NZ_CP116214.1 Protein Homology CDS 3884371 3884922 . - 0 ID=cds-WP_004130967.1;Parent=gene-PHA56_RS18495;Dbxref=Genbank:WP_004130967.1;Name=WP_004130967.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309036.1;locus_tag=PHA56_RS18495;product=YcbK family protein;protein_id=WP_004130967.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3885223 3887016 . - . ID=gene-PHA56_RS18500;Name=ldtD;gbkey=Gene;gene=ldtD;gene_biotype=protein_coding;locus_tag=PHA56_RS18500;old_locus_tag=PHA56_18500 NZ_CP116214.1 Protein Homology CDS 3885223 3887016 . - 0 ID=cds-WP_038424272.1;Parent=gene-PHA56_RS18500;Dbxref=Genbank:WP_038424272.1;Name=WP_038424272.1;Ontology_term=GO:0016740;gbkey=CDS;gene=ldtD;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226133.1;locus_tag=PHA56_RS18500;product=L%2CD-transpeptidase;protein_id=WP_038424272.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3887200 3891648 . - . ID=gene-PHA56_RS18505;Name=mukB;gbkey=Gene;gene=mukB;gene_biotype=protein_coding;locus_tag=PHA56_RS18505;old_locus_tag=PHA56_18505 NZ_CP116214.1 Protein Homology CDS 3887200 3891648 . - 0 ID=cds-WP_032748914.1;Parent=gene-PHA56_RS18505;Dbxref=Genbank:WP_032748914.1;Name=WP_032748914.1;Ontology_term=GO:0007059,GO:0030261,GO:0003677;gbkey=CDS;gene=mukB;go_function=DNA binding|0003677||IEA;go_process=chromosome segregation|0007059||IEA,chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226132.1;locus_tag=PHA56_RS18505;product=chromosome partition protein MukB;protein_id=WP_032748914.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3891648 3892352 . - . ID=gene-PHA56_RS18510;Name=mukE;gbkey=Gene;gene=mukE;gene_biotype=protein_coding;locus_tag=PHA56_RS18510;old_locus_tag=PHA56_18510 NZ_CP116214.1 Protein Homology CDS 3891648 3892352 . - 0 ID=cds-WP_004100725.1;Parent=gene-PHA56_RS18510;Dbxref=Genbank:WP_004100725.1;Name=WP_004100725.1;Ontology_term=GO:0007059,GO:0030261;gbkey=CDS;gene=mukE;go_process=chromosome segregation|0007059||IEA,chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226131.1;locus_tag=PHA56_RS18510;product=chromosome partition protein MukE;protein_id=WP_004100725.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3892333 3893655 . - . ID=gene-PHA56_RS18515;Name=mukF;gbkey=Gene;gene=mukF;gene_biotype=protein_coding;locus_tag=PHA56_RS18515;old_locus_tag=PHA56_18515 NZ_CP116214.1 Protein Homology CDS 3892333 3893655 . - 0 ID=cds-WP_004849491.1;Parent=gene-PHA56_RS18515;Dbxref=Genbank:WP_004849491.1;Name=WP_004849491.1;Ontology_term=GO:0007059,GO:0005509;gbkey=CDS;gene=mukF;go_function=calcium ion binding|0005509||IEA;go_process=chromosome segregation|0007059||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123549.1;locus_tag=PHA56_RS18515;product=chromosome partition protein MukF;protein_id=WP_004849491.1;transl_table=11 NZ_CP116214.1 RefSeq pseudogene 3893652 3894438 . - . ID=gene-PHA56_RS18520;Name=cmoM;gbkey=Gene;gene=cmoM;gene_biotype=pseudogene;locus_tag=PHA56_RS18520;old_locus_tag=PHA56_18520;pseudo=true NZ_CP116214.1 Protein Homology CDS 3893652 3894438 . - 0 ID=cds-PHA56_RS18520;Parent=gene-PHA56_RS18520;Note=frameshifted;gbkey=CDS;gene=cmoM;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226128.1;locus_tag=PHA56_RS18520;product=tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM;pseudo=true;transl_table=11 NZ_CP116214.1 RefSeq gene 3894560 3895339 . + . ID=gene-PHA56_RS18525;Name=elyC;gbkey=Gene;gene=elyC;gene_biotype=protein_coding;locus_tag=PHA56_RS18525;old_locus_tag=PHA56_18525 NZ_CP116214.1 Protein Homology CDS 3894560 3895339 . + 0 ID=cds-WP_014228647.1;Parent=gene-PHA56_RS18525;Dbxref=Genbank:WP_014228647.1;Name=WP_014228647.1;gbkey=CDS;gene=elyC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226127.1;locus_tag=PHA56_RS18525;product=envelope biogenesis factor ElyC;protein_id=WP_014228647.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3895316 3896209 . - . ID=gene-PHA56_RS18530;Name=PHA56_RS18530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS18530;old_locus_tag=PHA56_18530 NZ_CP116214.1 Protein Homology CDS 3895316 3896209 . - 0 ID=cds-WP_032694242.1;Parent=gene-PHA56_RS18530;Dbxref=Genbank:WP_032694242.1;Name=WP_032694242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226126.1;locus_tag=PHA56_RS18530;product=YcbJ family phosphotransferase;protein_id=WP_032694242.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3896351 3897097 . - . ID=gene-PHA56_RS18535;Name=kdsB;gbkey=Gene;gene=kdsB;gene_biotype=protein_coding;locus_tag=PHA56_RS18535;old_locus_tag=PHA56_18535 NZ_CP116214.1 Protein Homology CDS 3896351 3897097 . - 0 ID=cds-WP_032748911.1;Parent=gene-PHA56_RS18535;Dbxref=Genbank:WP_032748911.1;Name=WP_032748911.1;Ontology_term=GO:0009244,GO:0008690;gbkey=CDS;gene=kdsB;go_function=3-deoxy-manno-octulosonate cytidylyltransferase activity|0008690||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309028.1;locus_tag=PHA56_RS18535;product=3-deoxy-manno-octulosonate cytidylyltransferase;protein_id=WP_032748911.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3897094 3897276 . - . ID=gene-PHA56_RS18540;Name=ycaR;gbkey=Gene;gene=ycaR;gene_biotype=protein_coding;locus_tag=PHA56_RS18540;old_locus_tag=PHA56_18540 NZ_CP116214.1 Protein Homology CDS 3897094 3897276 . - 0 ID=cds-WP_004130952.1;Parent=gene-PHA56_RS18540;Dbxref=Genbank:WP_004130952.1;Name=WP_004130952.1;gbkey=CDS;gene=ycaR;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226124.1;locus_tag=PHA56_RS18540;product=protein YcaR;protein_id=WP_004130952.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3897329 3898558 . - . ID=gene-PHA56_RS18545;Name=PHA56_RS18545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS18545;old_locus_tag=PHA56_18545 NZ_CP116214.1 Protein Homology CDS 3897329 3898558 . - 0 ID=cds-WP_271292931.1;Parent=gene-PHA56_RS18545;Dbxref=Genbank:WP_271292931.1;Name=WP_271292931.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016808061.1;locus_tag=PHA56_RS18545;product=winged helix-turn-helix domain-containing protein;protein_id=WP_271292931.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3898604 3899584 . - . ID=gene-PHA56_RS18550;Name=lpxK;gbkey=Gene;gene=lpxK;gene_biotype=protein_coding;locus_tag=PHA56_RS18550;old_locus_tag=PHA56_18550 NZ_CP116214.1 Protein Homology CDS 3898604 3899584 . - 0 ID=cds-WP_038424271.1;Parent=gene-PHA56_RS18550;Dbxref=Genbank:WP_038424271.1;Name=WP_038424271.1;Ontology_term=GO:0009245,GO:0009029;gbkey=CDS;gene=lpxK;go_function=tetraacyldisaccharide 4'-kinase activity|0009029||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226122.1;locus_tag=PHA56_RS18550;product=tetraacyldisaccharide 4'-kinase;protein_id=WP_038424271.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3899581 3901329 . - . ID=gene-PHA56_RS18555;Name=msbA;gbkey=Gene;gene=msbA;gene_biotype=protein_coding;locus_tag=PHA56_RS18555;old_locus_tag=PHA56_18555 NZ_CP116214.1 Protein Homology CDS 3899581 3901329 . - 0 ID=cds-WP_014228642.1;Parent=gene-PHA56_RS18555;Dbxref=Genbank:WP_014228642.1;Name=WP_014228642.1;Ontology_term=GO:0055085,GO:0005524,GO:0034040,GO:0140359,GO:0016020;gbkey=CDS;gene=msbA;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled lipid transmembrane transporter activity|0034040||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014228642.1;locus_tag=PHA56_RS18555;product=lipid A ABC transporter ATP-binding protein/permease MsbA;protein_id=WP_014228642.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3901375 3903630 . - . ID=gene-PHA56_RS18560;Name=PHA56_RS18560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS18560;old_locus_tag=PHA56_18560 NZ_CP116214.1 Protein Homology CDS 3901375 3903630 . - 0 ID=cds-WP_038424270.1;Parent=gene-PHA56_RS18560;Dbxref=Genbank:WP_038424270.1;Name=WP_038424270.1;Ontology_term=GO:0030420,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=establishment of competence for transformation|0030420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014837960.1;locus_tag=PHA56_RS18560;product=ComEC family protein;protein_id=WP_038424270.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3903846 3904133 . - . ID=gene-PHA56_RS18565;Name=ihfB;gbkey=Gene;gene=ihfB;gene_biotype=protein_coding;locus_tag=PHA56_RS18565;old_locus_tag=PHA56_18565 NZ_CP116214.1 Protein Homology CDS 3903846 3904133 . - 0 ID=cds-WP_004100704.1;Parent=gene-PHA56_RS18565;Dbxref=Genbank:WP_004100704.1;Name=WP_004100704.1;Ontology_term=GO:0006310,GO:0006355,GO:0006417,GO:0075713,GO:0003677;gbkey=CDS;gene=ihfB;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,regulation of DNA-templated transcription|0006355||IEA,regulation of translation|0006417||IEA,establishment of integrated proviral latency|0075713||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004100704.1;locus_tag=PHA56_RS18565;product=integration host factor subunit beta;protein_id=WP_004100704.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3904284 3905957 . - . ID=gene-PHA56_RS18570;Name=rpsA;gbkey=Gene;gene=rpsA;gene_biotype=protein_coding;locus_tag=PHA56_RS18570;old_locus_tag=PHA56_18570 NZ_CP116214.1 Protein Homology CDS 3904284 3905957 . - 0 ID=cds-WP_004100702.1;Parent=gene-PHA56_RS18570;Dbxref=Genbank:WP_004100702.1;Name=WP_004100702.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsA;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123560.1;locus_tag=PHA56_RS18570;product=30S ribosomal protein S1;protein_id=WP_004100702.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3906095 3906778 . - . ID=gene-PHA56_RS18575;Name=cmk;gbkey=Gene;gene=cmk;gene_biotype=protein_coding;locus_tag=PHA56_RS18575;old_locus_tag=PHA56_18575 NZ_CP116214.1 Protein Homology CDS 3906095 3906778 . - 0 ID=cds-WP_004849475.1;Parent=gene-PHA56_RS18575;Dbxref=Genbank:WP_004849475.1;Name=WP_004849475.1;Ontology_term=GO:0015949,GO:0004127;gbkey=CDS;gene=cmk;go_function=cytidylate kinase activity|0004127||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309020.1;locus_tag=PHA56_RS18575;product=(d)CMP kinase;protein_id=WP_004849475.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3907071 3908354 . - . ID=gene-PHA56_RS18580;Name=aroA;gbkey=Gene;gene=aroA;gene_biotype=protein_coding;locus_tag=PHA56_RS18580;old_locus_tag=PHA56_18580 NZ_CP116214.1 Protein Homology CDS 3907071 3908354 . - 0 ID=cds-WP_038424269.1;Parent=gene-PHA56_RS18580;Dbxref=Genbank:WP_038424269.1;Name=WP_038424269.1;Ontology_term=GO:0009423,GO:0003866;gbkey=CDS;gene=aroA;go_function=3-phosphoshikimate 1-carboxyvinyltransferase activity|0003866||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226116.1;locus_tag=PHA56_RS18580;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=WP_038424269.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3908428 3909516 . - . ID=gene-PHA56_RS18585;Name=serC;gbkey=Gene;gene=serC;gene_biotype=protein_coding;locus_tag=PHA56_RS18585;old_locus_tag=PHA56_18585 NZ_CP116214.1 Protein Homology CDS 3908428 3909516 . - 0 ID=cds-WP_004849472.1;Parent=gene-PHA56_RS18585;Dbxref=Genbank:WP_004849472.1;Name=WP_004849472.1;Ontology_term=GO:0006564,GO:0003824,GO:0004648;gbkey=CDS;gene=serC;go_function=catalytic activity|0003824||IEA,O-phospho-L-serine:2-oxoglutarate aminotransferase activity|0004648||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226115.1;locus_tag=PHA56_RS18585;product=3-phosphoserine/phosphohydroxythreonine transaminase;protein_id=WP_004849472.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3909703 3910395 . - . ID=gene-PHA56_RS18590;Name=PHA56_RS18590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS18590;old_locus_tag=PHA56_18590 NZ_CP116214.1 Protein Homology CDS 3909703 3910395 . - 0 ID=cds-WP_014228639.1;Parent=gene-PHA56_RS18590;Dbxref=Genbank:WP_014228639.1;Name=WP_014228639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226114.1;locus_tag=PHA56_RS18590;product=DUF421 domain-containing protein;protein_id=WP_014228639.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3910510 3912270 . + . ID=gene-PHA56_RS18595;Name=PHA56_RS18595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS18595;old_locus_tag=PHA56_18595 NZ_CP116214.1 Protein Homology CDS 3910510 3912270 . + 0 ID=cds-WP_014228638.1;Parent=gene-PHA56_RS18595;Dbxref=Genbank:WP_014228638.1;Name=WP_014228638.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226113.1;locus_tag=PHA56_RS18595;product=30S ribosomal protein S12 methylthiotransferase accessory protein YcaO;protein_id=WP_014228638.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3912656 3913513 . + . ID=gene-PHA56_RS18600;Name=focA;gbkey=Gene;gene=focA;gene_biotype=protein_coding;locus_tag=PHA56_RS18600;old_locus_tag=PHA56_18600 NZ_CP116214.1 Protein Homology CDS 3912656 3913513 . + 0 ID=cds-WP_004849465.1;Parent=gene-PHA56_RS18600;Dbxref=Genbank:WP_004849465.1;Name=WP_004849465.1;gbkey=CDS;gene=focA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226112.1;locus_tag=PHA56_RS18600;product=formate transporter FocA;protein_id=WP_004849465.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3913565 3915847 . + . ID=gene-PHA56_RS18605;Name=pflB;gbkey=Gene;gene=pflB;gene_biotype=protein_coding;locus_tag=PHA56_RS18605;old_locus_tag=PHA56_18605 NZ_CP116214.1 Protein Homology CDS 3913565 3915847 . + 0 ID=cds-WP_014228637.1;Parent=gene-PHA56_RS18605;Dbxref=Genbank:WP_014228637.1;Name=WP_014228637.1;Ontology_term=GO:0006113,GO:0015942,GO:0008861,GO:0005737;gbkey=CDS;gene=pflB;go_component=cytoplasm|0005737||IEA;go_function=formate C-acetyltransferase activity|0008861||IEA;go_process=fermentation|0006113||IEA,formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226111.1;locus_tag=PHA56_RS18605;product=formate C-acetyltransferase;protein_id=WP_014228637.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3916051 3916791 . + . ID=gene-PHA56_RS18610;Name=pflA;gbkey=Gene;gene=pflA;gene_biotype=protein_coding;locus_tag=PHA56_RS18610;old_locus_tag=PHA56_18610 NZ_CP116214.1 Protein Homology CDS 3916051 3916791 . + 0 ID=cds-WP_004871674.1;Parent=gene-PHA56_RS18610;Dbxref=Genbank:WP_004871674.1;Name=WP_004871674.1;Ontology_term=GO:0043365,GO:0051539;gbkey=CDS;gene=pflA;go_function=[formate-C-acetyltransferase]-activating enzyme activity|0043365||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226110.1;locus_tag=PHA56_RS18610;product=pyruvate formate lyase 1-activating protein;protein_id=WP_004871674.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3916846 3917703 . - . ID=gene-PHA56_RS18615;Name=PHA56_RS18615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS18615;old_locus_tag=PHA56_18615 NZ_CP116214.1 Protein Homology CDS 3916846 3917703 . - 0 ID=cds-WP_014837957.1;Parent=gene-PHA56_RS18615;Dbxref=Genbank:WP_014837957.1;Name=WP_014837957.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004111873.1;locus_tag=PHA56_RS18615;product=MurR/RpiR family transcriptional regulator;protein_id=WP_014837957.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3917826 3918101 . + . ID=gene-PHA56_RS18620;Name=PHA56_RS18620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS18620;old_locus_tag=PHA56_18620 NZ_CP116214.1 Protein Homology CDS 3917826 3918101 . + 0 ID=cds-WP_014228635.1;Parent=gene-PHA56_RS18620;Dbxref=Genbank:WP_014228635.1;Name=WP_014228635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014837956.1;locus_tag=PHA56_RS18620;product=PTS sugar transporter subunit IIB;protein_id=WP_014228635.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3918119 3919384 . + . ID=gene-PHA56_RS18625;Name=PHA56_RS18625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS18625;old_locus_tag=PHA56_18625 NZ_CP116214.1 Protein Homology CDS 3918119 3919384 . + 0 ID=cds-WP_014228634.1;Parent=gene-PHA56_RS18625;Dbxref=Genbank:WP_014228634.1;Name=WP_014228634.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004871676.1;locus_tag=PHA56_RS18625;product=PTS transporter subunit IIC;protein_id=WP_014228634.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3919397 3920194 . + . ID=gene-PHA56_RS18630;Name=PHA56_RS18630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS18630;old_locus_tag=PHA56_18630 NZ_CP116214.1 Protein Homology CDS 3919397 3920194 . + 0 ID=cds-WP_014228633.1;Parent=gene-PHA56_RS18630;Dbxref=Genbank:WP_014228633.1;Name=WP_014228633.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009653310.1;locus_tag=PHA56_RS18630;product=transketolase;protein_id=WP_014228633.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3920194 3921105 . + . ID=gene-PHA56_RS18635;Name=PHA56_RS18635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS18635;old_locus_tag=PHA56_18635 NZ_CP116214.1 Protein Homology CDS 3920194 3921105 . + 0 ID=cds-WP_014837954.1;Parent=gene-PHA56_RS18635;Dbxref=Genbank:WP_014837954.1;Name=WP_014837954.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004849456.1;locus_tag=PHA56_RS18635;product=transketolase C-terminal domain-containing protein;protein_id=WP_014837954.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3921159 3921596 . + . ID=gene-PHA56_RS18640;Name=PHA56_RS18640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS18640;old_locus_tag=PHA56_18640 NZ_CP116214.1 Protein Homology CDS 3921159 3921596 . + 0 ID=cds-WP_025107511.1;Parent=gene-PHA56_RS18640;Dbxref=Genbank:WP_025107511.1;Name=WP_025107511.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004100664.1;locus_tag=PHA56_RS18640;product=PTS sugar transporter subunit IIA;protein_id=WP_025107511.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3921636 3922784 . - . ID=gene-PHA56_RS18645;Name=PHA56_RS18645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS18645;old_locus_tag=PHA56_18645 NZ_CP116214.1 Protein Homology CDS 3921636 3922784 . - 0 ID=cds-WP_009653261.1;Parent=gene-PHA56_RS18645;Dbxref=Genbank:WP_009653261.1;Name=WP_009653261.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226109.1;locus_tag=PHA56_RS18645;product=MFS transporter;protein_id=WP_009653261.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3923059 3923922 . - . ID=gene-PHA56_RS18650;Name=PHA56_RS18650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS18650;old_locus_tag=PHA56_18650 NZ_CP116214.1 Protein Homology CDS 3923059 3923922 . - 0 ID=cds-WP_025107512.1;Parent=gene-PHA56_RS18650;Dbxref=Genbank:WP_025107512.1;Name=WP_025107512.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226107.1;locus_tag=PHA56_RS18650;product=dimethyl sulfoxide reductase anchor subunit;protein_id=WP_025107512.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3923924 3924541 . - . ID=gene-PHA56_RS18655;Name=dmsB;gbkey=Gene;gene=dmsB;gene_biotype=protein_coding;locus_tag=PHA56_RS18655;old_locus_tag=PHA56_18655 NZ_CP116214.1 Protein Homology CDS 3923924 3924541 . - 0 ID=cds-WP_032694248.1;Parent=gene-PHA56_RS18655;Dbxref=Genbank:WP_032694248.1;Name=WP_032694248.1;gbkey=CDS;gene=dmsB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226106.1;locus_tag=PHA56_RS18655;product=dimethylsulfoxide reductase subunit B;protein_id=WP_032694248.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3924552 3926990 . - . ID=gene-PHA56_RS18660;Name=dmsA;gbkey=Gene;gene=dmsA;gene_biotype=protein_coding;locus_tag=PHA56_RS18660;old_locus_tag=PHA56_18660 NZ_CP116214.1 Protein Homology CDS 3924552 3926990 . - 0 ID=cds-WP_038424268.1;Parent=gene-PHA56_RS18660;Dbxref=Genbank:WP_038424268.1;Name=WP_038424268.1;Ontology_term=GO:0009389,GO:0030151;gbkey=CDS;gene=dmsA;go_function=dimethyl sulfoxide reductase activity|0009389||IEA,molybdenum ion binding|0030151||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226105.1;locus_tag=PHA56_RS18660;product=dimethylsulfoxide reductase subunit A;protein_id=WP_038424268.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3927191 3928483 . - . ID=gene-PHA56_RS18665;Name=serS;gbkey=Gene;gene=serS;gene_biotype=protein_coding;locus_tag=PHA56_RS18665;old_locus_tag=PHA56_18665 NZ_CP116214.1 Protein Homology CDS 3927191 3928483 . - 0 ID=cds-WP_009653254.1;Parent=gene-PHA56_RS18665;Dbxref=Genbank:WP_009653254.1;Name=WP_009653254.1;Ontology_term=GO:0006434,GO:0004828,GO:0005737;gbkey=CDS;gene=serS;go_component=cytoplasm|0005737||IEA;go_function=serine-tRNA ligase activity|0004828||IEA;go_process=seryl-tRNA aminoacylation|0006434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000887397.1;locus_tag=PHA56_RS18665;product=serine--tRNA ligase;protein_id=WP_009653254.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3928575 3929918 . - . ID=gene-PHA56_RS18670;Name=rarA;gbkey=Gene;gene=rarA;gene_biotype=protein_coding;gene_synonym=mgsA;locus_tag=PHA56_RS18670;old_locus_tag=PHA56_18670 NZ_CP116214.1 Protein Homology CDS 3928575 3929918 . - 0 ID=cds-WP_004849446.1;Parent=gene-PHA56_RS18670;Dbxref=Genbank:WP_004849446.1;Name=WP_004849446.1;gbkey=CDS;gene=rarA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123573.1;locus_tag=PHA56_RS18670;product=replication-associated recombination protein RarA;protein_id=WP_004849446.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3929927 3930538 . - . ID=gene-PHA56_RS18675;Name=lolA;gbkey=Gene;gene=lolA;gene_biotype=protein_coding;locus_tag=PHA56_RS18675;old_locus_tag=PHA56_18675 NZ_CP116214.1 Protein Homology CDS 3929927 3930538 . - 0 ID=cds-WP_004130911.1;Parent=gene-PHA56_RS18675;Dbxref=Genbank:WP_004130911.1;Name=WP_004130911.1;Ontology_term=GO:0009306,GO:0008320;gbkey=CDS;gene=lolA;go_function=protein transmembrane transporter activity|0008320||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010354356.1;locus_tag=PHA56_RS18675;product=outer membrane lipoprotein chaperone LolA;protein_id=WP_004130911.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3930660 3934838 . - . ID=gene-PHA56_RS18680;Name=ftsK;gbkey=Gene;gene=ftsK;gene_biotype=protein_coding;locus_tag=PHA56_RS18680;old_locus_tag=PHA56_18680 NZ_CP116214.1 Protein Homology CDS 3930660 3934838 . - 0 ID=cds-WP_208787269.1;Parent=gene-PHA56_RS18680;Dbxref=Genbank:WP_208787269.1;Name=WP_208787269.1;Ontology_term=GO:0003677,GO:0005524;gbkey=CDS;gene=ftsK;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226101.1;locus_tag=PHA56_RS18680;product=DNA translocase FtsK;protein_id=WP_208787269.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3934974 3935468 . - . ID=gene-PHA56_RS18685;Name=lrp;gbkey=Gene;gene=lrp;gene_biotype=protein_coding;locus_tag=PHA56_RS18685;old_locus_tag=PHA56_18685 NZ_CP116214.1 Protein Homology CDS 3934974 3935468 . - 0 ID=cds-WP_002439523.1;Parent=gene-PHA56_RS18685;Dbxref=Genbank:WP_002439523.1;Name=WP_002439523.1;gbkey=CDS;gene=lrp;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001591745.1;locus_tag=PHA56_RS18685;product=leucine-responsive transcriptional regulator Lrp;protein_id=WP_002439523.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3936000 3936968 . + . ID=gene-PHA56_RS18690;Name=trxB;gbkey=Gene;gene=trxB;gene_biotype=protein_coding;locus_tag=PHA56_RS18690;old_locus_tag=PHA56_18690 NZ_CP116214.1 Protein Homology CDS 3936000 3936968 . + 0 ID=cds-WP_004849433.1;Parent=gene-PHA56_RS18690;Dbxref=Genbank:WP_004849433.1;Name=WP_004849433.1;Ontology_term=GO:0019430,GO:0004791;gbkey=CDS;gene=trxB;go_function=thioredoxin-disulfide reductase activity|0004791||IEA;go_process=removal of superoxide radicals|0019430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226098.1;locus_tag=PHA56_RS18690;product=thioredoxin-disulfide reductase;protein_id=WP_004849433.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3937083 3938849 . + . ID=gene-PHA56_RS18695;Name=cydD;gbkey=Gene;gene=cydD;gene_biotype=protein_coding;locus_tag=PHA56_RS18695;old_locus_tag=PHA56_18695 NZ_CP116214.1 Protein Homology CDS 3937083 3938849 . + 0 ID=cds-WP_014228628.1;Parent=gene-PHA56_RS18695;Dbxref=Genbank:WP_014228628.1;Name=WP_014228628.1;Ontology_term=GO:0042883,GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;gene=cydD;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=cysteine transport|0042883||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226097.1;locus_tag=PHA56_RS18695;product=cysteine/glutathione ABC transporter permease/ATP-binding protein CydD;protein_id=WP_014228628.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3938850 3940571 . + . ID=gene-PHA56_RS18700;Name=cydC;gbkey=Gene;gene=cydC;gene_biotype=protein_coding;locus_tag=PHA56_RS18700;old_locus_tag=PHA56_18700 NZ_CP116214.1 Protein Homology CDS 3938850 3940571 . + 0 ID=cds-WP_038424266.1;Parent=gene-PHA56_RS18700;Dbxref=Genbank:WP_038424266.1;Name=WP_038424266.1;Ontology_term=GO:0034775,GO:0045454,GO:0005524,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;gene=cydC;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=glutathione transmembrane transport|0034775||IEA,cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226096.1;locus_tag=PHA56_RS18700;product=cysteine/glutathione ABC transporter ATP-binding protein/permease CydC;protein_id=WP_038424266.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3940610 3941314 . + . ID=gene-PHA56_RS18705;Name=aat;gbkey=Gene;gene=aat;gene_biotype=protein_coding;locus_tag=PHA56_RS18705;old_locus_tag=PHA56_18705 NZ_CP116214.1 Protein Homology CDS 3940610 3941314 . + 0 ID=cds-WP_038424265.1;Parent=gene-PHA56_RS18705;Dbxref=Genbank:WP_038424265.1;Name=WP_038424265.1;Ontology_term=GO:0006508,GO:0008914;gbkey=CDS;gene=aat;go_function=leucyltransferase activity|0008914||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009653303.1;locus_tag=PHA56_RS18705;product=leucyl/phenylalanyl-tRNA--protein transferase;protein_id=WP_038424265.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3941594 3941812 . + . ID=gene-PHA56_RS18710;Name=infA;gbkey=Gene;gene=infA;gene_biotype=protein_coding;locus_tag=PHA56_RS18710;old_locus_tag=PHA56_18710 NZ_CP116214.1 Protein Homology CDS 3941594 3941812 . + 0 ID=cds-WP_002211347.1;Parent=gene-PHA56_RS18710;Dbxref=Genbank:WP_002211347.1;Name=WP_002211347.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infA;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001040186.1;locus_tag=PHA56_RS18710;product=translation initiation factor IF-1;protein_id=WP_002211347.1;transl_table=11 NZ_CP116214.1 RefSeq direct_repeat 3941984 3942191 . + . ID=id-NZ_CP116214.1:3941984..3942191;gbkey=repeat_region;inference=COORDINATES: alignment:pilercr:v1.02;rpt_family=CRISPR;rpt_type=direct;rpt_unit_range=3942104..3942131;rpt_unit_seq=tttctaagctgcctgtacggcagtgaac NZ_CP116214.1 RefSeq gene 3942381 3944663 . - . ID=gene-PHA56_RS18715;Name=clpA;gbkey=Gene;gene=clpA;gene_biotype=protein_coding;locus_tag=PHA56_RS18715;old_locus_tag=PHA56_18715 NZ_CP116214.1 Protein Homology CDS 3942381 3944663 . - 0 ID=cds-WP_004849425.1;Parent=gene-PHA56_RS18715;Dbxref=Genbank:WP_004849425.1;Name=WP_004849425.1;Ontology_term=GO:0043335,GO:0005524,GO:0016887;gbkey=CDS;gene=clpA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein unfolding|0043335||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226093.1;locus_tag=PHA56_RS18715;product=ATP-dependent Clp protease ATP-binding subunit ClpA;protein_id=WP_004849425.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3944694 3945011 . - . ID=gene-PHA56_RS18720;Name=clpS;gbkey=Gene;gene=clpS;gene_biotype=protein_coding;locus_tag=PHA56_RS18720;old_locus_tag=PHA56_18720 NZ_CP116214.1 Protein Homology CDS 3944694 3945011 . - 0 ID=cds-WP_004100628.1;Parent=gene-PHA56_RS18720;Dbxref=Genbank:WP_004100628.1;Name=WP_004100628.1;Ontology_term=GO:0006508;gbkey=CDS;gene=clpS;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226092.1;locus_tag=PHA56_RS18720;product=ATP-dependent Clp protease adapter ClpS;protein_id=WP_004100628.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3945336 3945566 . + . ID=gene-PHA56_RS18725;Name=cspD;gbkey=Gene;gene=cspD;gene_biotype=protein_coding;locus_tag=PHA56_RS18725;old_locus_tag=PHA56_18725 NZ_CP116214.1 Protein Homology CDS 3945336 3945566 . + 0 ID=cds-WP_004100627.1;Parent=gene-PHA56_RS18725;Dbxref=Genbank:WP_004100627.1;Name=WP_004100627.1;gbkey=CDS;gene=cspD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226091.1;locus_tag=PHA56_RS18725;product=cold shock-like protein CspD;protein_id=WP_004100627.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3945634 3947580 . - . ID=gene-PHA56_RS18730;Name=macB;gbkey=Gene;gene=macB;gene_biotype=protein_coding;locus_tag=PHA56_RS18730;old_locus_tag=PHA56_18730 NZ_CP116214.1 Protein Homology CDS 3945634 3947580 . - 0 ID=cds-WP_025108294.1;Parent=gene-PHA56_RS18730;Dbxref=Genbank:WP_025108294.1;Name=WP_025108294.1;Ontology_term=GO:0005524,GO:0016020;gbkey=CDS;gene=macB;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226090.1;locus_tag=PHA56_RS18730;product=macrolide ABC transporter ATP-binding protein/permease MacB;protein_id=WP_025108294.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3947577 3948692 . - . ID=gene-PHA56_RS18735;Name=macA;gbkey=Gene;gene=macA;gene_biotype=protein_coding;locus_tag=PHA56_RS18735;old_locus_tag=PHA56_18735 NZ_CP116214.1 Protein Homology CDS 3947577 3948692 . - 0 ID=cds-WP_014228619.1;Parent=gene-PHA56_RS18735;Dbxref=Genbank:WP_014228619.1;Name=WP_014228619.1;Ontology_term=GO:1990961,GO:0022857,GO:0019898,GO:1990195;gbkey=CDS;gene=macA;go_component=extrinsic component of membrane|0019898||IEA,macrolide transmembrane transporter complex|1990195||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226089.1;locus_tag=PHA56_RS18735;product=macrolide transporter subunit MacA;protein_id=WP_014228619.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3948868 3950526 . - . ID=gene-PHA56_RS18740;Name=PHA56_RS18740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS18740;old_locus_tag=PHA56_18740 NZ_CP116214.1 Protein Homology CDS 3948868 3950526 . - 0 ID=cds-WP_014228618.1;Parent=gene-PHA56_RS18740;Dbxref=Genbank:WP_014228618.1;Name=WP_014228618.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706761.1;locus_tag=PHA56_RS18740;product=ATP-dependent endonuclease;protein_id=WP_014228618.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3950909 3951604 . + . ID=gene-PHA56_RS18745;Name=aqpZ;gbkey=Gene;gene=aqpZ;gene_biotype=protein_coding;locus_tag=PHA56_RS18745;old_locus_tag=PHA56_18745 NZ_CP116214.1 Protein Homology CDS 3950909 3951604 . + 0 ID=cds-WP_014228617.1;Parent=gene-PHA56_RS18745;Dbxref=Genbank:WP_014228617.1;Name=WP_014228617.1;Ontology_term=GO:0006833,GO:0015250;gbkey=CDS;gene=aqpZ;go_function=water channel activity|0015250||IEA;go_process=water transport|0006833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308988.1;locus_tag=PHA56_RS18745;product=aquaporin Z;protein_id=WP_014228617.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3951730 3952629 . + . ID=gene-PHA56_RS18750;Name=PHA56_RS18750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS18750;old_locus_tag=PHA56_18750 NZ_CP116214.1 Protein Homology CDS 3951730 3952629 . + 0 ID=cds-WP_014837946.1;Parent=gene-PHA56_RS18750;Dbxref=Genbank:WP_014837946.1;Name=WP_014837946.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226085.1;locus_tag=PHA56_RS18750;product=lysine exporter LysO family protein;protein_id=WP_014837946.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3952774 3954426 . + . ID=gene-PHA56_RS18755;Name=hcp;gbkey=Gene;gene=hcp;gene_biotype=protein_coding;gene_synonym=priS;locus_tag=PHA56_RS18755;old_locus_tag=PHA56_18755 NZ_CP116214.1 Protein Homology CDS 3952774 3954426 . + 0 ID=cds-WP_014837945.1;Parent=gene-PHA56_RS18755;Dbxref=Genbank:WP_014837945.1;Name=WP_014837945.1;Ontology_term=GO:0016661,GO:0051536;gbkey=CDS;gene=hcp;go_function=oxidoreductase activity%2C acting on other nitrogenous compounds as donors|0016661||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122080.1;locus_tag=PHA56_RS18755;product=hydroxylamine reductase;protein_id=WP_014837945.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3954437 3955405 . + . ID=gene-PHA56_RS18760;Name=hcr;gbkey=Gene;gene=hcr;gene_biotype=protein_coding;locus_tag=PHA56_RS18760;old_locus_tag=PHA56_18760 NZ_CP116214.1 Protein Homology CDS 3954437 3955405 . + 0 ID=cds-WP_042944805.1;Parent=gene-PHA56_RS18760;Dbxref=Genbank:WP_042944805.1;Name=WP_042944805.1;Ontology_term=GO:0016491,GO:0051536;gbkey=CDS;gene=hcr;go_function=oxidoreductase activity|0016491||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308985.1;locus_tag=PHA56_RS18760;product=NADH oxidoreductase;protein_id=WP_042944805.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3955445 3955879 . - . ID=gene-PHA56_RS18765;Name=PHA56_RS18765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS18765;old_locus_tag=PHA56_18765 NZ_CP116214.1 Protein Homology CDS 3955445 3955879 . - 0 ID=cds-WP_014228613.1;Parent=gene-PHA56_RS18765;Dbxref=Genbank:WP_014228613.1;Name=WP_014228613.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226082.1;locus_tag=PHA56_RS18765;product=DoxX family protein;protein_id=WP_014228613.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3956032 3957750 . + . ID=gene-PHA56_RS18770;Name=poxB;gbkey=Gene;gene=poxB;gene_biotype=protein_coding;locus_tag=PHA56_RS18770;old_locus_tag=PHA56_18770 NZ_CP116214.1 Protein Homology CDS 3956032 3957750 . + 0 ID=cds-WP_014228612.1;Parent=gene-PHA56_RS18770;Dbxref=Genbank:WP_014228612.1;Name=WP_014228612.1;Ontology_term=GO:0006090,GO:0000287,GO:0030976,GO:0052737;gbkey=CDS;gene=poxB;go_function=magnesium ion binding|0000287||IEA,thiamine pyrophosphate binding|0030976||IEA,pyruvate dehydrogenase (quinone) activity|0052737||IEA;go_process=pyruvate metabolic process|0006090||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226081.1;locus_tag=PHA56_RS18770;product=ubiquinone-dependent pyruvate dehydrogenase;protein_id=WP_014228612.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3957905 3958906 . + . ID=gene-PHA56_RS18775;Name=ltaE;gbkey=Gene;gene=ltaE;gene_biotype=protein_coding;locus_tag=PHA56_RS18775;old_locus_tag=PHA56_18775 NZ_CP116214.1 Protein Homology CDS 3957905 3958906 . + 0 ID=cds-WP_014228611.1;Parent=gene-PHA56_RS18775;Dbxref=Genbank:WP_014228611.1;Name=WP_014228611.1;Ontology_term=GO:0006520,GO:0016829;gbkey=CDS;gene=ltaE;go_function=lyase activity|0016829||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226080.1;locus_tag=PHA56_RS18775;product=low-specificity L-threonine aldolase;protein_id=WP_014228611.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3958917 3960350 . + . ID=gene-PHA56_RS18780;Name=PHA56_RS18780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS18780;old_locus_tag=PHA56_18780 NZ_CP116214.1 Protein Homology CDS 3958917 3960350 . + 0 ID=cds-WP_032694257.1;Parent=gene-PHA56_RS18780;Dbxref=Genbank:WP_032694257.1;Name=WP_032694257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004849398.1;locus_tag=PHA56_RS18780;product=DUF2867 domain-containing protein;protein_id=WP_032694257.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3960447 3961460 . + . ID=gene-PHA56_RS18785;Name=PHA56_RS18785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS18785;old_locus_tag=PHA56_18785 NZ_CP116214.1 Protein Homology CDS 3960447 3961460 . + 0 ID=cds-WP_009653274.1;Parent=gene-PHA56_RS18785;Dbxref=Genbank:WP_009653274.1;Name=WP_009653274.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004871758.1;locus_tag=PHA56_RS18785;product=NAD(P)-dependent oxidoreductase;protein_id=WP_009653274.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3961457 3962287 . - . ID=gene-PHA56_RS18790;Name=PHA56_RS18790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS18790;old_locus_tag=PHA56_18790 NZ_CP116214.1 Protein Homology CDS 3961457 3962287 . - 0 ID=cds-WP_014837943.1;Parent=gene-PHA56_RS18790;Dbxref=Genbank:WP_014837943.1;Name=WP_014837943.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004111841.1;locus_tag=PHA56_RS18790;product=N-acetylmuramoyl-L-alanine amidase;protein_id=WP_014837943.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3962284 3962607 . - . ID=gene-PHA56_RS18795;Name=PHA56_RS18795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS18795;old_locus_tag=PHA56_18795 NZ_CP116214.1 Protein Homology CDS 3962284 3962607 . - 0 ID=cds-WP_004100606.1;Parent=gene-PHA56_RS18795;Dbxref=Genbank:WP_004100606.1;Name=WP_004100606.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004111837.1;locus_tag=PHA56_RS18795;product=heavy metal-binding domain-containing protein;protein_id=WP_004100606.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3962725 3963240 . + . ID=gene-PHA56_RS18800;Name=PHA56_RS18800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS18800;old_locus_tag=PHA56_18800 NZ_CP116214.1 Protein Homology CDS 3962725 3963240 . + 0 ID=cds-WP_004849391.1;Parent=gene-PHA56_RS18800;Dbxref=Genbank:WP_004849391.1;Name=WP_004849391.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226075.1;locus_tag=PHA56_RS18800;product=lipoprotein;protein_id=WP_004849391.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3963468 3964196 . + . ID=gene-PHA56_RS18805;Name=artP;gbkey=Gene;gene=artP;gene_biotype=protein_coding;locus_tag=PHA56_RS18805;old_locus_tag=PHA56_18805 NZ_CP116214.1 Protein Homology CDS 3963468 3964196 . + 0 ID=cds-WP_004111834.1;Parent=gene-PHA56_RS18805;Dbxref=Genbank:WP_004111834.1;Name=WP_004111834.1;Ontology_term=GO:0003333,GO:0005524,GO:0015424;gbkey=CDS;gene=artP;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742668.1;locus_tag=PHA56_RS18805;product=arginine ABC transporter ATP-binding protein ArtP;protein_id=WP_004111834.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3964216 3964947 . + . ID=gene-PHA56_RS18810;Name=artJ;gbkey=Gene;gene=artJ;gene_biotype=protein_coding;locus_tag=PHA56_RS18810;old_locus_tag=PHA56_18810 NZ_CP116214.1 Protein Homology CDS 3964216 3964947 . + 0 ID=cds-WP_004130868.1;Parent=gene-PHA56_RS18810;Dbxref=Genbank:WP_004130868.1;Name=WP_004130868.1;gbkey=CDS;gene=artJ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226073.1;locus_tag=PHA56_RS18810;product=arginine ABC transporter substrate-binding protein;protein_id=WP_004130868.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3964954 3965670 . + . ID=gene-PHA56_RS18815;Name=artQ;gbkey=Gene;gene=artQ;gene_biotype=protein_coding;locus_tag=PHA56_RS18815;old_locus_tag=PHA56_18815 NZ_CP116214.1 Protein Homology CDS 3964954 3965670 . + 0 ID=cds-WP_004100599.1;Parent=gene-PHA56_RS18815;Dbxref=Genbank:WP_004100599.1;Name=WP_004100599.1;Ontology_term=GO:0055085,GO:0071705,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=artQ;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA,nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226072.1;locus_tag=PHA56_RS18815;product=arginine ABC transporter permease ArtQ;protein_id=WP_004100599.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3965670 3966338 . + . ID=gene-PHA56_RS18820;Name=artM;gbkey=Gene;gene=artM;gene_biotype=protein_coding;locus_tag=PHA56_RS18820;old_locus_tag=PHA56_18820 NZ_CP116214.1 Protein Homology CDS 3965670 3966338 . + 0 ID=cds-WP_014228606.1;Parent=gene-PHA56_RS18820;Dbxref=Genbank:WP_014228606.1;Name=WP_014228606.1;Ontology_term=GO:0071705,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=artM;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226071.1;locus_tag=PHA56_RS18820;product=arginine ABC transporter permease ArtM;protein_id=WP_014228606.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3966512 3967243 . + . ID=gene-PHA56_RS18825;Name=artJ;gbkey=Gene;gene=artJ;gene_biotype=protein_coding;locus_tag=PHA56_RS18825;old_locus_tag=PHA56_18825 NZ_CP116214.1 Protein Homology CDS 3966512 3967243 . + 0 ID=cds-WP_014228605.1;Parent=gene-PHA56_RS18825;Dbxref=Genbank:WP_014228605.1;Name=WP_014228605.1;gbkey=CDS;gene=artJ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226070.1;locus_tag=PHA56_RS18825;product=ABC transporter substrate-binding protein ArtJ;protein_id=WP_014228605.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3968071 3969543 . - . ID=gene-PHA56_RS18830;Name=PHA56_RS18830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS18830;old_locus_tag=PHA56_18830 NZ_CP116214.1 Protein Homology CDS 3968071 3969543 . - 0 ID=cds-WP_014228604.1;Parent=gene-PHA56_RS18830;Dbxref=Genbank:WP_014228604.1;Name=WP_014228604.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002896382.1;locus_tag=PHA56_RS18830;product=histidine kinase dimerization/phospho-acceptor domain-containing protein;protein_id=WP_014228604.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3969540 3970256 . - . ID=gene-PHA56_RS18835;Name=PHA56_RS18835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS18835;old_locus_tag=PHA56_18835 NZ_CP116214.1 Protein Homology CDS 3969540 3970256 . - 0 ID=cds-WP_004849381.1;Parent=gene-PHA56_RS18835;Dbxref=Genbank:WP_004849381.1;Name=WP_004849381.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226068.1;locus_tag=PHA56_RS18835;product=response regulator transcription factor;protein_id=WP_004849381.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3970335 3971465 . - . ID=gene-PHA56_RS18840;Name=rlmC;gbkey=Gene;gene=rlmC;gene_biotype=protein_coding;locus_tag=PHA56_RS18840;old_locus_tag=PHA56_18840 NZ_CP116214.1 Protein Homology CDS 3970335 3971465 . - 0 ID=cds-WP_038424263.1;Parent=gene-PHA56_RS18840;Dbxref=Genbank:WP_038424263.1;Name=WP_038424263.1;Ontology_term=GO:0008649;gbkey=CDS;gene=rlmC;go_function=rRNA methyltransferase activity|0008649||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226067.1;locus_tag=PHA56_RS18840;product=23S rRNA (uracil(747)-C(5))-methyltransferase RlmC;protein_id=WP_038424263.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3971508 3971996 . - . ID=gene-PHA56_RS18845;Name=PHA56_RS18845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS18845;old_locus_tag=PHA56_18845 NZ_CP116214.1 Protein Homology CDS 3971508 3971996 . - 0 ID=cds-WP_004100588.1;Parent=gene-PHA56_RS18845;Dbxref=Genbank:WP_004100588.1;Name=WP_004100588.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226066.1;locus_tag=PHA56_RS18845;product=YbjO family protein;protein_id=WP_004100588.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3972054 3972899 . - . ID=gene-PHA56_RS18850;Name=potI;gbkey=Gene;gene=potI;gene_biotype=protein_coding;locus_tag=PHA56_RS18850;old_locus_tag=PHA56_18850 NZ_CP116214.1 Protein Homology CDS 3972054 3972899 . - 0 ID=cds-WP_004130847.1;Parent=gene-PHA56_RS18850;Dbxref=Genbank:WP_004130847.1;Name=WP_004130847.1;Ontology_term=GO:0055085;gbkey=CDS;gene=potI;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226065.1;locus_tag=PHA56_RS18850;product=putrescine ABC transporter permease PotI;protein_id=WP_004130847.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3972896 3973849 . - . ID=gene-PHA56_RS18855;Name=potH;gbkey=Gene;gene=potH;gene_biotype=protein_coding;locus_tag=PHA56_RS18855;old_locus_tag=PHA56_18855 NZ_CP116214.1 Protein Homology CDS 3972896 3973849 . - 0 ID=cds-WP_014228601.1;Parent=gene-PHA56_RS18855;Dbxref=Genbank:WP_014228601.1;Name=WP_014228601.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=potH;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226064.1;locus_tag=PHA56_RS18855;product=putrescine ABC transporter permease PotH;protein_id=WP_014228601.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3973860 3974993 . - . ID=gene-PHA56_RS18860;Name=potG;gbkey=Gene;gene=potG;gene_biotype=protein_coding;locus_tag=PHA56_RS18860;old_locus_tag=PHA56_18860 NZ_CP116214.1 Protein Homology CDS 3973860 3974993 . - 0 ID=cds-WP_004134592.1;Parent=gene-PHA56_RS18860;Dbxref=Genbank:WP_004134592.1;Name=WP_004134592.1;Ontology_term=GO:0015846,GO:0055085,GO:0005524,GO:0015417,GO:0022857,GO:0043190;gbkey=CDS;gene=potG;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type polyamine transporter activity|0015417||IEA,transmembrane transporter activity|0022857||IEA;go_process=polyamine transport|0015846||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000996010.1;locus_tag=PHA56_RS18860;product=putrescine ABC transporter ATP-binding subunit PotG;protein_id=WP_004134592.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3975096 3976208 . - . ID=gene-PHA56_RS18865;Name=potF;gbkey=Gene;gene=potF;gene_biotype=protein_coding;locus_tag=PHA56_RS18865;old_locus_tag=PHA56_18865 NZ_CP116214.1 Protein Homology CDS 3975096 3976208 . - 0 ID=cds-WP_014228600.1;Parent=gene-PHA56_RS18865;Dbxref=Genbank:WP_014228600.1;Name=WP_014228600.1;Ontology_term=GO:0015846,GO:0019808,GO:0042597;gbkey=CDS;gene=potF;go_component=periplasmic space|0042597||IEA;go_function=polyamine binding|0019808||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226062.1;locus_tag=PHA56_RS18865;product=spermidine/putrescine ABC transporter substrate-binding protein PotF;protein_id=WP_014228600.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3976557 3977036 . - . ID=gene-PHA56_RS18870;Name=PHA56_RS18870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS18870;old_locus_tag=PHA56_18870 NZ_CP116214.1 Protein Homology CDS 3976557 3977036 . - 0 ID=cds-WP_004849367.1;Parent=gene-PHA56_RS18870;Dbxref=Genbank:WP_004849367.1;Name=WP_004849367.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226061.1;locus_tag=PHA56_RS18870;product=YbjN domain-containing protein;protein_id=WP_004849367.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3977126 3978028 . - . ID=gene-PHA56_RS18875;Name=rimK;gbkey=Gene;gene=rimK;gene_biotype=protein_coding;locus_tag=PHA56_RS18875;old_locus_tag=PHA56_18875 NZ_CP116214.1 Protein Homology CDS 3977126 3978028 . - 0 ID=cds-WP_009653278.1;Parent=gene-PHA56_RS18875;Dbxref=Genbank:WP_009653278.1;Name=WP_009653278.1;Ontology_term=GO:0036211,GO:0005524,GO:0046872;gbkey=CDS;gene=rimK;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226060.1;locus_tag=PHA56_RS18875;product=30S ribosomal protein S6--L-glutamate ligase;protein_id=WP_009653278.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3978132 3978854 . - . ID=gene-PHA56_RS18880;Name=nfsA;gbkey=Gene;gene=nfsA;gene_biotype=protein_coding;locus_tag=PHA56_RS18880;old_locus_tag=PHA56_18880 NZ_CP116214.1 Protein Homology CDS 3978132 3978854 . - 0 ID=cds-WP_025108025.1;Parent=gene-PHA56_RS18880;Dbxref=Genbank:WP_025108025.1;Name=WP_025108025.1;gbkey=CDS;gene=nfsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308958.1;locus_tag=PHA56_RS18880;product=nitroreductase NfsA;protein_id=WP_025108025.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3978838 3979128 . - . ID=gene-PHA56_RS18885;Name=PHA56_RS18885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS18885;old_locus_tag=PHA56_18885 NZ_CP116214.1 Protein Homology CDS 3978838 3979128 . - 0 ID=cds-WP_009653259.1;Parent=gene-PHA56_RS18885;Dbxref=Genbank:WP_009653259.1;Name=WP_009653259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001740708.1;locus_tag=PHA56_RS18885;product=YbjC family protein;protein_id=WP_009653259.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3979333 3979596 . + . ID=gene-PHA56_RS18890;Name=PHA56_RS18890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS18890;old_locus_tag=PHA56_18890 NZ_CP116214.1 Protein Homology CDS 3979333 3979596 . + 0 ID=cds-WP_004100567.1;Parent=gene-PHA56_RS18890;Dbxref=Genbank:WP_004100567.1;Name=WP_004100567.1;Ontology_term=GO:0097573;gbkey=CDS;go_function=glutathione oxidoreductase activity|0097573||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226056.1;locus_tag=PHA56_RS18890;product=GrxA family glutaredoxin;protein_id=WP_004100567.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3979603 3979986 . - . ID=gene-PHA56_RS18895;Name=ybjM;gbkey=Gene;gene=ybjM;gene_biotype=protein_coding;locus_tag=PHA56_RS18895;old_locus_tag=PHA56_18895 NZ_CP116214.1 Protein Homology CDS 3979603 3979986 . - 0 ID=cds-WP_004849358.1;Parent=gene-PHA56_RS18895;Dbxref=Genbank:WP_004849358.1;Name=WP_004849358.1;Ontology_term=GO:0016020;gbkey=CDS;gene=ybjM;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226055.1;locus_tag=PHA56_RS18895;product=inner membrane protein YbjM;protein_id=WP_004849358.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3980254 3981939 . + . ID=gene-PHA56_RS18900;Name=PHA56_RS18900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS18900;old_locus_tag=PHA56_18900 NZ_CP116214.1 Protein Homology CDS 3980254 3981939 . + 0 ID=cds-WP_004849356.1;Parent=gene-PHA56_RS18900;Dbxref=Genbank:WP_004849356.1;Name=WP_004849356.1;Ontology_term=GO:0006813,GO:0008324;gbkey=CDS;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004179131.1;locus_tag=PHA56_RS18900;product=aspartate:alanine antiporter;protein_id=WP_004849356.1;transl_table=11 NZ_CP116214.1 RefSeq pseudogene 3982162 3982382 . - . ID=gene-PHA56_RS18905;Name=PHA56_RS18905;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS18905;old_locus_tag=PHA56_18905;pseudo=true NZ_CP116214.1 Protein Homology CDS 3982162 3982382 . - 0 ID=cds-PHA56_RS18905;Parent=gene-PHA56_RS18905;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001504085.1;locus_tag=PHA56_RS18905;product=ogr/Delta-like zinc finger family protein;pseudo=true;transl_table=11 NZ_CP116214.1 RefSeq pseudogene 3982470 3983560 . - . ID=gene-PHA56_RS18910;Name=PHA56_RS18910;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS18910;old_locus_tag=PHA56_18910;pseudo=true NZ_CP116214.1 Protein Homology CDS 3982470 3983560 . - 0 ID=cds-PHA56_RS18910;Parent=gene-PHA56_RS18910;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461623.1;locus_tag=PHA56_RS18910;product=phage late control D family protein;pseudo=true;transl_table=11 NZ_CP116214.1 RefSeq gene 3983557 3984042 . - . ID=gene-PHA56_RS18915;Name=PHA56_RS18915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS18915;old_locus_tag=PHA56_18915 NZ_CP116214.1 Protein Homology CDS 3983557 3984042 . - 0 ID=cds-WP_038424262.1;Parent=gene-PHA56_RS18915;Dbxref=Genbank:WP_038424262.1;Name=WP_038424262.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461624.1;locus_tag=PHA56_RS18915;product=phage tail protein;protein_id=WP_038424262.1;transl_table=11 NZ_CP116214.1 RefSeq pseudogene 3984039 3984335 . - . ID=gene-PHA56_RS18920;Name=PHA56_RS18920;end_range=3984335,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS18920;old_locus_tag=PHA56_18920;partial=true;pseudo=true NZ_CP116214.1 Protein Homology CDS 3984039 3984335 . - 0 ID=cds-PHA56_RS18920;Parent=gene-PHA56_RS18920;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=3984335,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004134619.1;locus_tag=PHA56_RS18920;partial=true;product=phage tail tape measure protein;pseudo=true;transl_table=11 NZ_CP116214.1 RefSeq pseudogene 3984344 3984661 . + . ID=gene-PHA56_RS18925;Name=PHA56_RS18925;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS18925;old_locus_tag=PHA56_18925;partial=true;pseudo=true;start_range=.,3984344 NZ_CP116214.1 Protein Homology CDS 3984344 3984661 . + 0 ID=cds-PHA56_RS18925;Parent=gene-PHA56_RS18925;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461650.1;locus_tag=PHA56_RS18925;partial=true;product=oxidoreductase;pseudo=true;start_range=.,3984344;transl_table=11 NZ_CP116214.1 RefSeq pseudogene 3984661 3985683 . + . ID=gene-PHA56_RS18930;Name=PHA56_RS18930;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS18930;old_locus_tag=PHA56_18930;pseudo=true NZ_CP116214.1 Protein Homology CDS 3984661 3985683 . + 0 ID=cds-PHA56_RS18930;Parent=gene-PHA56_RS18930;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000517631.1;locus_tag=PHA56_RS18930;product=phage portal protein;pseudo=true;transl_table=11 NZ_CP116214.1 RefSeq gene 3985713 3986108 . - . ID=gene-PHA56_RS18935;Name=PHA56_RS18935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS18935;old_locus_tag=PHA56_18935 NZ_CP116214.1 Protein Homology CDS 3985713 3986108 . - 0 ID=cds-WP_025108027.1;Parent=gene-PHA56_RS18935;Dbxref=Genbank:WP_025108027.1;Name=WP_025108027.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000030309.1;locus_tag=PHA56_RS18935;product=hypothetical protein;protein_id=WP_025108027.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3986111 3987037 . - . ID=gene-PHA56_RS18940;Name=PHA56_RS18940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS18940;old_locus_tag=PHA56_18940 NZ_CP116214.1 Protein Homology CDS 3986111 3987037 . - 0 ID=cds-WP_038424952.1;Parent=gene-PHA56_RS18940;Dbxref=Genbank:WP_038424952.1;Name=WP_038424952.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001167692.1;locus_tag=PHA56_RS18940;product=AAA family ATPase;protein_id=WP_038424952.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3987077 3987259 . - . ID=gene-PHA56_RS18945;Name=PHA56_RS18945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS18945;old_locus_tag=PHA56_18945 NZ_CP116214.1 Protein Homology CDS 3987077 3987259 . - 0 ID=cds-WP_071889100.1;Parent=gene-PHA56_RS18945;Dbxref=Genbank:WP_071889100.1;Name=WP_071889100.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015675150.1;locus_tag=PHA56_RS18945;product=hypothetical protein;protein_id=WP_071889100.1;transl_table=11 NZ_CP116214.1 RefSeq pseudogene 3987395 3987478 . - . ID=gene-PHA56_RS18950;Name=PHA56_RS18950;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS18950;old_locus_tag=PHA56_18950;partial=true;pseudo=true;start_range=.,3987395 NZ_CP116214.1 Protein Homology CDS 3987395 3987478 . - 0 ID=cds-PHA56_RS18950;Parent=gene-PHA56_RS18950;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001487081.1;locus_tag=PHA56_RS18950;partial=true;product=regulator;pseudo=true;start_range=.,3987395;transl_table=11 NZ_CP116214.1 RefSeq gene 3987602 3988159 . + . ID=gene-PHA56_RS18955;Name=PHA56_RS18955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS18955;old_locus_tag=PHA56_18955 NZ_CP116214.1 Protein Homology CDS 3987602 3988159 . + 0 ID=cds-WP_071889118.1;Parent=gene-PHA56_RS18955;Dbxref=Genbank:WP_071889118.1;Name=WP_071889118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001047328.1;locus_tag=PHA56_RS18955;product=phage repressor protein CI;protein_id=WP_071889118.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3988181 3989950 . + . ID=gene-PHA56_RS18960;Name=PHA56_RS18960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS18960;old_locus_tag=PHA56_18960 NZ_CP116214.1 Protein Homology CDS 3988181 3989950 . + 0 ID=cds-WP_025108029.1;Parent=gene-PHA56_RS18960;Dbxref=Genbank:WP_025108029.1;Name=WP_025108029.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001015470.1;locus_tag=PHA56_RS18960;product=AAA family ATPase;protein_id=WP_025108029.1;transl_table=11 NZ_CP116214.1 RefSeq pseudogene 3990096 3991064 . + . ID=gene-PHA56_RS18965;Name=PHA56_RS18965;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS18965;old_locus_tag=PHA56_18965;pseudo=true NZ_CP116214.1 Protein Homology CDS 3990096 3991064 . + 0 ID=cds-PHA56_RS18965;Parent=gene-PHA56_RS18965;Note=internal stop;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226013.1;locus_tag=PHA56_RS18965;product=tyrosine-type recombinase/integrase;pseudo=true;transl_table=11 NZ_CP116214.1 RefSeq gene 3991134 3991715 . + . ID=gene-PHA56_RS18970;Name=PHA56_RS18970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS18970;old_locus_tag=PHA56_18970 NZ_CP116214.1 GeneMarkS-2+ CDS 3991134 3991715 . + 0 ID=cds-WP_025108030.1;Parent=gene-PHA56_RS18970;Dbxref=Genbank:WP_025108030.1;Name=WP_025108030.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PHA56_RS18970;product=hypothetical protein;protein_id=WP_025108030.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3991885 3992427 . - . ID=gene-PHA56_RS18975;Name=PHA56_RS18975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS18975;old_locus_tag=PHA56_18975 NZ_CP116214.1 Protein Homology CDS 3991885 3992427 . - 0 ID=cds-WP_189087227.1;Parent=gene-PHA56_RS18975;Dbxref=Genbank:WP_189087227.1;Name=WP_189087227.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009653296.1;locus_tag=PHA56_RS18975;product=TetR family transcriptional regulator;protein_id=WP_189087227.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3992610 3993812 . + . ID=gene-PHA56_RS18980;Name=PHA56_RS18980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS18980;old_locus_tag=PHA56_18980 NZ_CP116214.1 Protein Homology CDS 3992610 3993812 . + 0 ID=cds-WP_014228591.1;Parent=gene-PHA56_RS18980;Dbxref=Genbank:WP_014228591.1;Name=WP_014228591.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226011.1;locus_tag=PHA56_RS18980;product=MFS transporter;protein_id=WP_014228591.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3993812 3994627 . + . ID=gene-PHA56_RS18985;Name=PHA56_RS18985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS18985;old_locus_tag=PHA56_18985 NZ_CP116214.1 Protein Homology CDS 3993812 3994627 . + 0 ID=cds-WP_038424260.1;Parent=gene-PHA56_RS18985;Dbxref=Genbank:WP_038424260.1;Name=WP_038424260.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226010.1;locus_tag=PHA56_RS18985;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_038424260.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3994675 3995910 . - . ID=gene-PHA56_RS18990;Name=PHA56_RS18990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS18990;old_locus_tag=PHA56_18990 NZ_CP116214.1 Protein Homology CDS 3994675 3995910 . - 0 ID=cds-WP_032694260.1;Parent=gene-PHA56_RS18990;Dbxref=Genbank:WP_032694260.1;Name=WP_032694260.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004849349.1;locus_tag=PHA56_RS18990;product=MFS transporter;protein_id=WP_032694260.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3996229 3996822 . + . ID=gene-PHA56_RS18995;Name=ybjG;gbkey=Gene;gene=ybjG;gene_biotype=protein_coding;locus_tag=PHA56_RS18995;old_locus_tag=PHA56_18995 NZ_CP116214.1 Protein Homology CDS 3996229 3996822 . + 0 ID=cds-WP_004849347.1;Parent=gene-PHA56_RS18995;Dbxref=Genbank:WP_004849347.1;Name=WP_004849347.1;Ontology_term=GO:0050380,GO:0005886;gbkey=CDS;gene=ybjG;go_component=plasma membrane|0005886||IEA;go_function=undecaprenyl-diphosphatase activity|0050380||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004849347.1;locus_tag=PHA56_RS18995;product=undecaprenyl-diphosphate phosphatase;protein_id=WP_004849347.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3996948 3997706 . + . ID=gene-PHA56_RS19000;Name=deoR;gbkey=Gene;gene=deoR;gene_biotype=protein_coding;locus_tag=PHA56_RS19000;old_locus_tag=PHA56_19000 NZ_CP116214.1 Protein Homology CDS 3996948 3997706 . + 0 ID=cds-WP_004849345.1;Parent=gene-PHA56_RS19000;Dbxref=Genbank:WP_004849345.1;Name=WP_004849345.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=deoR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226007.1;locus_tag=PHA56_RS19000;product=DNA-binding transcriptional repressor DeoR;protein_id=WP_004849345.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3997735 3998937 . - . ID=gene-PHA56_RS19005;Name=dacC;gbkey=Gene;gene=dacC;gene_biotype=protein_coding;locus_tag=PHA56_RS19005;old_locus_tag=PHA56_19005 NZ_CP116214.1 Protein Homology CDS 3997735 3998937 . - 0 ID=cds-WP_038423245.1;Parent=gene-PHA56_RS19005;Dbxref=Genbank:WP_038423245.1;Name=WP_038423245.1;gbkey=CDS;gene=dacC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226006.1;locus_tag=PHA56_RS19005;product=serine-type D-Ala-D-Ala carboxypeptidase;protein_id=WP_038423245.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3999195 3999821 . + . ID=gene-PHA56_RS19010;Name=PHA56_RS19010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS19010;old_locus_tag=PHA56_19010 NZ_CP116214.1 Protein Homology CDS 3999195 3999821 . + 0 ID=cds-WP_032748870.1;Parent=gene-PHA56_RS19010;Dbxref=Genbank:WP_032748870.1;Name=WP_032748870.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226004.1;locus_tag=PHA56_RS19010;product=glutathione S-transferase family protein;protein_id=WP_032748870.1;transl_table=11 NZ_CP116214.1 RefSeq gene 3999824 4000939 . - . ID=gene-PHA56_RS19015;Name=PHA56_RS19015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS19015;old_locus_tag=PHA56_19015 NZ_CP116214.1 Protein Homology CDS 3999824 4000939 . - 0 ID=cds-WP_038424259.1;Parent=gene-PHA56_RS19015;Dbxref=Genbank:WP_038424259.1;Name=WP_038424259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016808091.1;locus_tag=PHA56_RS19015;product=PQQ-dependent sugar dehydrogenase;protein_id=WP_038424259.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4001043 4001426 . - . ID=gene-PHA56_RS19020;Name=bssR;gbkey=Gene;gene=bssR;gene_biotype=protein_coding;locus_tag=PHA56_RS19020;old_locus_tag=PHA56_19020 NZ_CP116214.1 Protein Homology CDS 4001043 4001426 . - 0 ID=cds-WP_119834572.1;Parent=gene-PHA56_RS19020;Dbxref=Genbank:WP_119834572.1;Name=WP_119834572.1;gbkey=CDS;gene=bssR;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226002.1;locus_tag=PHA56_RS19020;product=biofilm formation regulator BssR;protein_id=WP_119834572.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4001806 4003047 . + . ID=gene-PHA56_RS19025;Name=PHA56_RS19025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS19025;old_locus_tag=PHA56_19025 NZ_CP116214.1 Protein Homology CDS 4001806 4003047 . + 0 ID=cds-WP_038424951.1;Parent=gene-PHA56_RS19025;Dbxref=Genbank:WP_038424951.1;Name=WP_038424951.1;Ontology_term=GO:0008643,GO:0005351,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=carbohydrate:proton symporter activity|0005351||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004849208.1;locus_tag=PHA56_RS19025;product=oligosaccharide MFS transporter;protein_id=WP_038424951.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4003081 4003560 . - . ID=gene-PHA56_RS19030;Name=PHA56_RS19030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS19030;old_locus_tag=PHA56_19030 NZ_CP116214.1 Protein Homology CDS 4003081 4003560 . - 0 ID=cds-WP_161506334.1;Parent=gene-PHA56_RS19030;Dbxref=Genbank:WP_161506334.1;Name=WP_161506334.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004179079.1;locus_tag=PHA56_RS19030;product=hypothetical protein;protein_id=WP_161506334.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4003857 4005182 . + . ID=gene-PHA56_RS19035;Name=rimO;gbkey=Gene;gene=rimO;gene_biotype=protein_coding;locus_tag=PHA56_RS19035;old_locus_tag=PHA56_19035 NZ_CP116214.1 Protein Homology CDS 4003857 4005182 . + 0 ID=cds-WP_009653812.1;Parent=gene-PHA56_RS19035;Dbxref=Genbank:WP_009653812.1;Name=WP_009653812.1;Ontology_term=GO:0018339,GO:0008172,GO:0016782,GO:0051539,GO:1904047;gbkey=CDS;gene=rimO;go_function=S-methyltransferase activity|0008172||IEA,transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid|0018339||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226000.1;locus_tag=PHA56_RS19035;product=30S ribosomal protein S12 methylthiotransferase RimO;protein_id=WP_009653812.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4005309 4006220 . - . ID=gene-PHA56_RS19040;Name=gsiD;gbkey=Gene;gene=gsiD;gene_biotype=protein_coding;locus_tag=PHA56_RS19040;old_locus_tag=PHA56_19040 NZ_CP116214.1 Protein Homology CDS 4005309 4006220 . - 0 ID=cds-WP_009653837.1;Parent=gene-PHA56_RS19040;Dbxref=Genbank:WP_009653837.1;Name=WP_009653837.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=gsiD;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225999.1;locus_tag=PHA56_RS19040;product=glutathione ABC transporter permease GsiD;protein_id=WP_009653837.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4006222 4007142 . - . ID=gene-PHA56_RS19045;Name=gsiC;gbkey=Gene;gene=gsiC;gene_biotype=protein_coding;locus_tag=PHA56_RS19045;old_locus_tag=PHA56_19045 NZ_CP116214.1 Protein Homology CDS 4006222 4007142 . - 0 ID=cds-WP_009653824.1;Parent=gene-PHA56_RS19045;Dbxref=Genbank:WP_009653824.1;Name=WP_009653824.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=gsiC;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225998.1;locus_tag=PHA56_RS19045;product=glutathione ABC transporter permease GsiC;protein_id=WP_009653824.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4007195 4008733 . - . ID=gene-PHA56_RS19050;Name=gsiB;gbkey=Gene;gene=gsiB;gene_biotype=protein_coding;locus_tag=PHA56_RS19050;old_locus_tag=PHA56_19050 NZ_CP116214.1 Protein Homology CDS 4007195 4008733 . - 0 ID=cds-WP_004849160.1;Parent=gene-PHA56_RS19050;Dbxref=Genbank:WP_004849160.1;Name=WP_004849160.1;Ontology_term=GO:0055085,GO:0043190;gbkey=CDS;gene=gsiB;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123644.1;locus_tag=PHA56_RS19050;product=glutathione ABC transporter substrate-binding protein GsiB;protein_id=WP_004849160.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4008771 4010624 . - . ID=gene-PHA56_RS19055;Name=gsiA;gbkey=Gene;gene=gsiA;gene_biotype=protein_coding;locus_tag=PHA56_RS19055;old_locus_tag=PHA56_19055 NZ_CP116214.1 Protein Homology CDS 4008771 4010624 . - 0 ID=cds-WP_014228532.1;Parent=gene-PHA56_RS19055;Dbxref=Genbank:WP_014228532.1;Name=WP_014228532.1;Ontology_term=GO:0006810,GO:0000166,GO:0005524;gbkey=CDS;gene=gsiA;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004849158.1;locus_tag=PHA56_RS19055;product=glutathione ABC transporter ATP-binding protein GsiA;protein_id=WP_014228532.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4010637 4011578 . - . ID=gene-PHA56_RS19060;Name=iaaA;gbkey=Gene;gene=iaaA;gene_biotype=protein_coding;locus_tag=PHA56_RS19060;old_locus_tag=PHA56_19060 NZ_CP116214.1 Protein Homology CDS 4010637 4011578 . - 0 ID=cds-WP_014228531.1;Parent=gene-PHA56_RS19060;Dbxref=Genbank:WP_014228531.1;Name=WP_014228531.1;gbkey=CDS;gene=iaaA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225995.1;locus_tag=PHA56_RS19060;product=beta-aspartyl-peptidase;protein_id=WP_014228531.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4011756 4012991 . + . ID=gene-PHA56_RS19065;Name=moeA;gbkey=Gene;gene=moeA;gene_biotype=protein_coding;locus_tag=PHA56_RS19065;old_locus_tag=PHA56_19065 NZ_CP116214.1 Protein Homology CDS 4011756 4012991 . + 0 ID=cds-WP_014837888.1;Parent=gene-PHA56_RS19065;Dbxref=Genbank:WP_014837888.1;Name=WP_014837888.1;Ontology_term=GO:0006777,GO:0032324;gbkey=CDS;gene=moeA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA,molybdopterin cofactor biosynthetic process|0032324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225994.1;locus_tag=PHA56_RS19065;product=molybdopterin molybdotransferase MoeA;protein_id=WP_014837888.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4012991 4013746 . + . ID=gene-PHA56_RS19070;Name=moeB;gbkey=Gene;gene=moeB;gene_biotype=protein_coding;locus_tag=PHA56_RS19070;old_locus_tag=PHA56_19070 NZ_CP116214.1 Protein Homology CDS 4012991 4013746 . + 0 ID=cds-WP_038424256.1;Parent=gene-PHA56_RS19070;Dbxref=Genbank:WP_038424256.1;Name=WP_038424256.1;Ontology_term=GO:0006777,GO:0008641;gbkey=CDS;gene=moeB;go_function=ubiquitin-like modifier activating enzyme activity|0008641||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004849152.1;locus_tag=PHA56_RS19070;product=molybdopterin-synthase adenylyltransferase MoeB;protein_id=WP_038424256.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4013899 4014798 . + . ID=gene-PHA56_RS19075;Name=PHA56_RS19075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS19075;old_locus_tag=PHA56_19075 NZ_CP116214.1 Protein Homology CDS 4013899 4014798 . + 0 ID=cds-WP_038424255.1;Parent=gene-PHA56_RS19075;Dbxref=Genbank:WP_038424255.1;Name=WP_038424255.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225992.1;locus_tag=PHA56_RS19075;product=glycyl-radical enzyme activating protein;protein_id=WP_038424255.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4014803 4017235 . + . ID=gene-PHA56_RS19080;Name=PHA56_RS19080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS19080;old_locus_tag=PHA56_19080 NZ_CP116214.1 Protein Homology CDS 4014803 4017235 . + 0 ID=cds-WP_038424254.1;Parent=gene-PHA56_RS19080;Dbxref=Genbank:WP_038424254.1;Name=WP_038424254.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225991.1;locus_tag=PHA56_RS19080;product=formate C-acetyltransferase/glycerol dehydratase family glycyl radical enzyme;protein_id=WP_038424254.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4017445 4018260 . + . ID=gene-PHA56_RS19085;Name=PHA56_RS19085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS19085;old_locus_tag=PHA56_19085 NZ_CP116214.1 Protein Homology CDS 4017445 4018260 . + 0 ID=cds-WP_032718688.1;Parent=gene-PHA56_RS19085;Dbxref=Genbank:WP_032718688.1;Name=WP_032718688.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015367562.1;locus_tag=PHA56_RS19085;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_032718688.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4018398 4019663 . + . ID=gene-PHA56_RS19090;Name=PHA56_RS19090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS19090;old_locus_tag=PHA56_19090 NZ_CP116214.1 Protein Homology CDS 4018398 4019663 . + 0 ID=cds-WP_014228525.1;Parent=gene-PHA56_RS19090;Dbxref=Genbank:WP_014228525.1;Name=WP_014228525.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004130784.1;locus_tag=PHA56_RS19090;product=DUF1479 domain-containing protein;protein_id=WP_014228525.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4019660 4020760 . - . ID=gene-PHA56_RS19095;Name=PHA56_RS19095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS19095;old_locus_tag=PHA56_19095 NZ_CP116214.1 Protein Homology CDS 4019660 4020760 . - 0 ID=cds-WP_014837883.1;Parent=gene-PHA56_RS19095;Dbxref=Genbank:WP_014837883.1;Name=WP_014837883.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014837883.1;locus_tag=PHA56_RS19095;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_014837883.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4021032 4022333 . + . ID=gene-PHA56_RS19100;Name=PHA56_RS19100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS19100;old_locus_tag=PHA56_19100 NZ_CP116214.1 Protein Homology CDS 4021032 4022333 . + 0 ID=cds-WP_004849139.1;Parent=gene-PHA56_RS19100;Dbxref=Genbank:WP_004849139.1;Name=WP_004849139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225987.1;locus_tag=PHA56_RS19100;product=MFS transporter;protein_id=WP_004849139.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4022349 4024712 . + . ID=gene-PHA56_RS19105;Name=PHA56_RS19105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS19105;old_locus_tag=PHA56_19105 NZ_CP116214.1 Protein Homology CDS 4022349 4024712 . + 0 ID=cds-WP_038424252.1;Parent=gene-PHA56_RS19105;Dbxref=Genbank:WP_038424252.1;Name=WP_038424252.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017146294.1;locus_tag=PHA56_RS19105;product=glycoside hydrolase family 31 protein;protein_id=WP_038424252.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4024798 4024968 . - . ID=gene-PHA56_RS19110;Name=PHA56_RS19110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS19110;old_locus_tag=PHA56_19110 NZ_CP116214.1 GeneMarkS-2+ CDS 4024798 4024968 . - 0 ID=cds-WP_158413315.1;Parent=gene-PHA56_RS19110;Dbxref=Genbank:WP_158413315.1;Name=WP_158413315.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PHA56_RS19110;product=hypothetical protein;protein_id=WP_158413315.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4025356 4026948 . - . ID=gene-PHA56_RS19115;Name=PHA56_RS19115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS19115;old_locus_tag=PHA56_19115 NZ_CP116214.1 Protein Homology CDS 4025356 4026948 . - 0 ID=cds-WP_004849135.1;Parent=gene-PHA56_RS19115;Dbxref=Genbank:WP_004849135.1;Name=WP_004849135.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459815.1;locus_tag=PHA56_RS19115;product=ABC-F family ATPase;protein_id=WP_004849135.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4027126 4027908 . + . ID=gene-PHA56_RS19120;Name=PHA56_RS19120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS19120;old_locus_tag=PHA56_19120 NZ_CP116214.1 Protein Homology CDS 4027126 4027908 . + 0 ID=cds-WP_038424251.1;Parent=gene-PHA56_RS19120;Dbxref=Genbank:WP_038424251.1;Name=WP_038424251.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009653786.1;locus_tag=PHA56_RS19120;product=tyrosine-protein phosphatase;protein_id=WP_038424251.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4028099 4029013 . + . ID=gene-PHA56_RS19125;Name=ldtB;gbkey=Gene;gene=ldtB;gene_biotype=protein_coding;locus_tag=PHA56_RS19125;old_locus_tag=PHA56_19125 NZ_CP116214.1 Protein Homology CDS 4028099 4029013 . + 0 ID=cds-WP_004130773.1;Parent=gene-PHA56_RS19125;Dbxref=Genbank:WP_004130773.1;Name=WP_004130773.1;gbkey=CDS;gene=ldtB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001369247.1;locus_tag=PHA56_RS19125;product=L%2CD-transpeptidase;protein_id=WP_004130773.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4029056 4029772 . - . ID=gene-PHA56_RS19130;Name=PHA56_RS19130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS19130;old_locus_tag=PHA56_19130 NZ_CP116214.1 Protein Homology CDS 4029056 4029772 . - 0 ID=cds-WP_038424250.1;Parent=gene-PHA56_RS19130;Dbxref=Genbank:WP_038424250.1;Name=WP_038424250.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225982.1;locus_tag=PHA56_RS19130;product=GntR family transcriptional regulator;protein_id=WP_038424250.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4029843 4031219 . - . ID=gene-PHA56_RS19135;Name=PHA56_RS19135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS19135;old_locus_tag=PHA56_19135 NZ_CP116214.1 Protein Homology CDS 4029843 4031219 . - 0 ID=cds-WP_025108091.1;Parent=gene-PHA56_RS19135;Dbxref=Genbank:WP_025108091.1;Name=WP_025108091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225981.1;locus_tag=PHA56_RS19135;product=glycoside hydrolase family 1 protein;protein_id=WP_025108091.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4031371 4032411 . - . ID=gene-PHA56_RS19140;Name=PHA56_RS19140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS19140;old_locus_tag=PHA56_19140 NZ_CP116214.1 Protein Homology CDS 4031371 4032411 . - 0 ID=cds-WP_025108092.1;Parent=gene-PHA56_RS19140;Dbxref=Genbank:WP_025108092.1;Name=WP_025108092.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010428955.1;locus_tag=PHA56_RS19140;product=aldo/keto reductase;protein_id=WP_025108092.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4032522 4033628 . - . ID=gene-PHA56_RS19145;Name=PHA56_RS19145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS19145;old_locus_tag=PHA56_19145 NZ_CP116214.1 Protein Homology CDS 4032522 4033628 . - 0 ID=cds-WP_038424249.1;Parent=gene-PHA56_RS19145;Dbxref=Genbank:WP_038424249.1;Name=WP_038424249.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014837877.1;locus_tag=PHA56_RS19145;product=anion transporter;protein_id=WP_038424249.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4033625 4034098 . - . ID=gene-PHA56_RS19150;Name=mntR;gbkey=Gene;gene=mntR;gene_biotype=protein_coding;locus_tag=PHA56_RS19150;old_locus_tag=PHA56_19150 NZ_CP116214.1 Protein Homology CDS 4033625 4034098 . - 0 ID=cds-WP_014228517.1;Parent=gene-PHA56_RS19150;Dbxref=Genbank:WP_014228517.1;Name=WP_014228517.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700,GO:0046914,GO:0046983;gbkey=CDS;gene=mntR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,transition metal ion binding|0046914||IEA,protein dimerization activity|0046983||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004130763.1;locus_tag=PHA56_RS19150;product=manganese-binding transcriptional regulator MntR;protein_id=WP_014228517.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4034281 4034406 . + . ID=gene-PHA56_RS19155;Name=mntS;gbkey=Gene;gene=mntS;gene_biotype=protein_coding;locus_tag=PHA56_RS19155;old_locus_tag=PHA56_19155 NZ_CP116214.1 Protein Homology CDS 4034281 4034406 . + 0 ID=cds-WP_004100500.1;Parent=gene-PHA56_RS19155;Dbxref=Genbank:WP_004100500.1;Name=WP_004100500.1;gbkey=CDS;gene=mntS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225978.1;locus_tag=PHA56_RS19155;product=manganase accumulation protein MntS;protein_id=WP_004100500.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4034676 4036253 . + . ID=gene-PHA56_RS19160;Name=PHA56_RS19160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS19160;old_locus_tag=PHA56_19160 NZ_CP116214.1 Protein Homology CDS 4034676 4036253 . + 0 ID=cds-WP_038424248.1;Parent=gene-PHA56_RS19160;Dbxref=Genbank:WP_038424248.1;Name=WP_038424248.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225977.1;locus_tag=PHA56_RS19160;product=phosphoethanolamine transferase;protein_id=WP_038424248.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4036323 4036835 . - . ID=gene-PHA56_RS19165;Name=ompX;gbkey=Gene;gene=ompX;gene_biotype=protein_coding;locus_tag=PHA56_RS19165;old_locus_tag=PHA56_19165 NZ_CP116214.1 Protein Homology CDS 4036323 4036835 . - 0 ID=cds-WP_004130755.1;Parent=gene-PHA56_RS19165;Dbxref=Genbank:WP_004130755.1;Name=WP_004130755.1;gbkey=CDS;gene=ompX;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225976.1;locus_tag=PHA56_RS19165;product=outer membrane protein OmpX;protein_id=WP_004130755.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4037187 4038074 . + . ID=gene-PHA56_RS19170;Name=rhtA;gbkey=Gene;gene=rhtA;gene_biotype=protein_coding;locus_tag=PHA56_RS19170;old_locus_tag=PHA56_19170 NZ_CP116214.1 Protein Homology CDS 4037187 4038074 . + 0 ID=cds-WP_004100495.1;Parent=gene-PHA56_RS19170;Dbxref=Genbank:WP_004100495.1;Name=WP_004100495.1;gbkey=CDS;gene=rhtA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225974.1;locus_tag=PHA56_RS19170;product=threonine/homoserine exporter RhtA;protein_id=WP_004100495.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4038293 4038796 . + . ID=gene-PHA56_RS19175;Name=dps;gbkey=Gene;gene=dps;gene_biotype=protein_coding;gene_synonym=pexB;locus_tag=PHA56_RS19175;old_locus_tag=PHA56_19175 NZ_CP116214.1 Protein Homology CDS 4038293 4038796 . + 0 ID=cds-WP_004130751.1;Parent=gene-PHA56_RS19175;Dbxref=Genbank:WP_004130751.1;Name=WP_004130751.1;Ontology_term=GO:0016722;gbkey=CDS;gene=dps;go_function=oxidoreductase activity%2C acting on metal ions|0016722||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001730644.1;locus_tag=PHA56_RS19175;product=DNA starvation/stationary phase protection protein Dps;protein_id=WP_004130751.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4039168 4039914 . + . ID=gene-PHA56_RS19180;Name=glnH;gbkey=Gene;gene=glnH;gene_biotype=protein_coding;locus_tag=PHA56_RS19180;old_locus_tag=PHA56_19180 NZ_CP116214.1 Protein Homology CDS 4039168 4039914 . + 0 ID=cds-WP_004849110.1;Parent=gene-PHA56_RS19180;Dbxref=Genbank:WP_004849110.1;Name=WP_004849110.1;Ontology_term=GO:0015276,GO:0016020;gbkey=CDS;gene=glnH;go_component=membrane|0016020||IEA;go_function=ligand-gated monoatomic ion channel activity|0015276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123681.1;locus_tag=PHA56_RS19180;product=glutamine ABC transporter substrate-binding protein GlnH;protein_id=WP_004849110.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4040048 4040707 . + . ID=gene-PHA56_RS19185;Name=glnP;gbkey=Gene;gene=glnP;gene_biotype=protein_coding;locus_tag=PHA56_RS19185;old_locus_tag=PHA56_19185 NZ_CP116214.1 Protein Homology CDS 4040048 4040707 . + 0 ID=cds-WP_004100490.1;Parent=gene-PHA56_RS19185;Dbxref=Genbank:WP_004100490.1;Name=WP_004100490.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=glnP;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015367581.1;locus_tag=PHA56_RS19185;product=glutamine ABC transporter permease GlnP;protein_id=WP_004100490.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4040704 4041426 . + . ID=gene-PHA56_RS19190;Name=glnQ;gbkey=Gene;gene=glnQ;gene_biotype=protein_coding;locus_tag=PHA56_RS19190;old_locus_tag=PHA56_19190 NZ_CP116214.1 Protein Homology CDS 4040704 4041426 . + 0 ID=cds-WP_004849106.1;Parent=gene-PHA56_RS19190;Dbxref=Genbank:WP_004849106.1;Name=WP_004849106.1;Ontology_term=GO:0003333,GO:0005524,GO:0015424;gbkey=CDS;gene=glnQ;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000569103.1;locus_tag=PHA56_RS19190;product=glutamine ABC transporter ATP-binding protein GlnQ;protein_id=WP_004849106.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4041843 4046108 . + . ID=gene-PHA56_RS19195;Name=PHA56_RS19195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS19195;old_locus_tag=PHA56_19195 NZ_CP116214.1 Protein Homology CDS 4041843 4046108 . + 0 ID=cds-WP_038424247.1;Parent=gene-PHA56_RS19195;Dbxref=Genbank:WP_038424247.1;Name=WP_038424247.1;Ontology_term=GO:0046819,GO:0015474,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=autotransporter activity|0015474||IEA;go_process=protein secretion by the type V secretion system|0046819||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014837875.1;locus_tag=PHA56_RS19195;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=WP_038424247.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4046223 4048433 . + . ID=gene-PHA56_RS19200;Name=ybiO;gbkey=Gene;gene=ybiO;gene_biotype=protein_coding;locus_tag=PHA56_RS19200;old_locus_tag=PHA56_19200 NZ_CP116214.1 Protein Homology CDS 4046223 4048433 . + 0 ID=cds-WP_076752528.1;Parent=gene-PHA56_RS19200;Dbxref=Genbank:WP_076752528.1;Name=WP_076752528.1;Ontology_term=GO:0055085;gbkey=CDS;gene=ybiO;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004135181.1;locus_tag=PHA56_RS19200;product=mechanosensitive channel protein;protein_id=WP_076752528.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4048428 4049342 . - . ID=gene-PHA56_RS19205;Name=rlmF;gbkey=Gene;gene=rlmF;gene_biotype=protein_coding;locus_tag=PHA56_RS19205;old_locus_tag=PHA56_19205 NZ_CP116214.1 Protein Homology CDS 4048428 4049342 . - 0 ID=cds-WP_119834421.1;Parent=gene-PHA56_RS19205;Dbxref=Genbank:WP_119834421.1;Name=WP_119834421.1;Ontology_term=GO:0006364,GO:0008988;gbkey=CDS;gene=rlmF;go_function=rRNA (adenine-N6-)-methyltransferase activity|0008988||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004100487.1;locus_tag=PHA56_RS19205;product=23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF;protein_id=WP_119834421.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4049438 4050052 . + . ID=gene-PHA56_RS19210;Name=PHA56_RS19210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS19210;old_locus_tag=PHA56_19210 NZ_CP116214.1 Protein Homology CDS 4049438 4050052 . + 0 ID=cds-WP_014228513.1;Parent=gene-PHA56_RS19210;Dbxref=Genbank:WP_014228513.1;Name=WP_014228513.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225966.1;locus_tag=PHA56_RS19210;product=flavin reductase family protein;protein_id=WP_014228513.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4050350 4052638 . + . ID=gene-PHA56_RS19215;Name=PHA56_RS19215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS19215;old_locus_tag=PHA56_19215 NZ_CP116214.1 Protein Homology CDS 4050350 4052638 . + 0 ID=cds-WP_119834422.1;Parent=gene-PHA56_RS19215;Dbxref=Genbank:WP_119834422.1;Name=WP_119834422.1;Ontology_term=GO:0015891,GO:0015344;gbkey=CDS;go_function=siderophore uptake transmembrane transporter activity|0015344||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415326.1;locus_tag=PHA56_RS19215;product=catecholate siderophore receptor Fiu;protein_id=WP_119834422.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4052684 4053361 . + . ID=gene-PHA56_RS19220;Name=ybiX;gbkey=Gene;gene=ybiX;gene_biotype=protein_coding;locus_tag=PHA56_RS19220;old_locus_tag=PHA56_19220 NZ_CP116214.1 Protein Homology CDS 4052684 4053361 . + 0 ID=cds-WP_004849092.1;Parent=gene-PHA56_RS19220;Dbxref=Genbank:WP_004849092.1;Name=WP_004849092.1;gbkey=CDS;gene=ybiX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415325.4;locus_tag=PHA56_RS19220;product=PKHD-type hydroxylase YbiX;protein_id=WP_004849092.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4053430 4053696 . + . ID=gene-PHA56_RS19225;Name=PHA56_RS19225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS19225;old_locus_tag=PHA56_19225 NZ_CP116214.1 Protein Homology CDS 4053430 4053696 . + 0 ID=cds-WP_004130731.1;Parent=gene-PHA56_RS19225;Dbxref=Genbank:WP_004130731.1;Name=WP_004130731.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225964.1;locus_tag=PHA56_RS19225;product=DksA/TraR family C4-type zinc finger protein;protein_id=WP_004130731.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4053981 4054241 . + . ID=gene-PHA56_RS19230;Name=ybiJ;gbkey=Gene;gene=ybiJ;gene_biotype=protein_coding;locus_tag=PHA56_RS19230;old_locus_tag=PHA56_19230 NZ_CP116214.1 Protein Homology CDS 4053981 4054241 . + 0 ID=cds-WP_004130722.1;Parent=gene-PHA56_RS19230;Dbxref=Genbank:WP_004130722.1;Name=WP_004130722.1;gbkey=CDS;gene=ybiJ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225963.1;locus_tag=PHA56_RS19230;product=DUF1471 family protein YbiJ;protein_id=WP_004130722.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4054377 4055345 . - . ID=gene-PHA56_RS19235;Name=ybiB;gbkey=Gene;gene=ybiB;gene_biotype=protein_coding;locus_tag=PHA56_RS19235;old_locus_tag=PHA56_19235 NZ_CP116214.1 Protein Homology CDS 4054377 4055345 . - 0 ID=cds-WP_014837874.1;Parent=gene-PHA56_RS19235;Dbxref=Genbank:WP_014837874.1;Name=WP_014837874.1;gbkey=CDS;gene=ybiB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225962.1;locus_tag=PHA56_RS19235;product=DNA-binding protein YbiB;protein_id=WP_014837874.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4055388 4057532 . - . ID=gene-PHA56_RS19240;Name=dinG;gbkey=Gene;gene=dinG;gene_biotype=protein_coding;locus_tag=PHA56_RS19240;old_locus_tag=PHA56_19240 NZ_CP116214.1 Protein Homology CDS 4055388 4057532 . - 0 ID=cds-WP_119834423.1;Parent=gene-PHA56_RS19240;Dbxref=Genbank:WP_119834423.1;Name=WP_119834423.1;Ontology_term=GO:0006139,GO:0003677,GO:0003678,GO:0005524,GO:0016818;gbkey=CDS;gene=dinG;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459799.1;locus_tag=PHA56_RS19240;product=ATP-dependent DNA helicase DinG;protein_id=WP_119834423.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4057733 4059082 . - . ID=gene-PHA56_RS19245;Name=rhlE;gbkey=Gene;gene=rhlE;gene_biotype=protein_coding;locus_tag=PHA56_RS19245;old_locus_tag=PHA56_19245 NZ_CP116214.1 Protein Homology CDS 4057733 4059082 . - 0 ID=cds-WP_032694521.1;Parent=gene-PHA56_RS19245;Dbxref=Genbank:WP_032694521.1;Name=WP_032694521.1;Ontology_term=GO:0003724;gbkey=CDS;gene=rhlE;go_function=RNA helicase activity|0003724||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004100475.1;locus_tag=PHA56_RS19245;product=ATP-dependent RNA helicase RhlE;protein_id=WP_032694521.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4059383 4060375 . - . ID=gene-PHA56_RS19250;Name=PHA56_RS19250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS19250;old_locus_tag=PHA56_19250 NZ_CP116214.1 Protein Homology CDS 4059383 4060375 . - 0 ID=cds-WP_042944684.1;Parent=gene-PHA56_RS19250;Dbxref=Genbank:WP_042944684.1;Name=WP_042944684.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004183482.1;locus_tag=PHA56_RS19250;product=transketolase family protein;protein_id=WP_042944684.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4060375 4061220 . - . ID=gene-PHA56_RS19255;Name=PHA56_RS19255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS19255;old_locus_tag=PHA56_19255 NZ_CP116214.1 Protein Homology CDS 4060375 4061220 . - 0 ID=cds-WP_014228507.1;Parent=gene-PHA56_RS19255;Dbxref=Genbank:WP_014228507.1;Name=WP_014228507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225957.1;locus_tag=PHA56_RS19255;product=transketolase;protein_id=WP_014228507.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4061234 4061983 . - . ID=gene-PHA56_RS19260;Name=PHA56_RS19260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS19260;old_locus_tag=PHA56_19260 NZ_CP116214.1 Protein Homology CDS 4061234 4061983 . - 0 ID=cds-WP_014228506.1;Parent=gene-PHA56_RS19260;Dbxref=Genbank:WP_014228506.1;Name=WP_014228506.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225956.1;locus_tag=PHA56_RS19260;product=glucose 1-dehydrogenase;protein_id=WP_014228506.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4062033 4063364 . - . ID=gene-PHA56_RS19265;Name=PHA56_RS19265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS19265;old_locus_tag=PHA56_19265 NZ_CP116214.1 Protein Homology CDS 4062033 4063364 . - 0 ID=cds-WP_014228505.1;Parent=gene-PHA56_RS19265;Dbxref=Genbank:WP_014228505.1;Name=WP_014228505.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225955.1;locus_tag=PHA56_RS19265;product=MFS transporter;protein_id=WP_014228505.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4063705 4064628 . + . ID=gene-PHA56_RS19270;Name=PHA56_RS19270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS19270;old_locus_tag=PHA56_19270 NZ_CP116214.1 Protein Homology CDS 4063705 4064628 . + 0 ID=cds-WP_014228504.1;Parent=gene-PHA56_RS19270;Dbxref=Genbank:WP_014228504.1;Name=WP_014228504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225953.1;locus_tag=PHA56_RS19270;product=LysR substrate-binding domain-containing protein;protein_id=WP_014228504.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4064700 4065377 . + . ID=gene-PHA56_RS19275;Name=cecR;gbkey=Gene;gene=cecR;gene_biotype=protein_coding;locus_tag=PHA56_RS19275;old_locus_tag=PHA56_19275 NZ_CP116214.1 Protein Homology CDS 4064700 4065377 . + 0 ID=cds-WP_271292932.1;Parent=gene-PHA56_RS19275;Dbxref=Genbank:WP_271292932.1;Name=WP_271292932.1;gbkey=CDS;gene=cecR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014169235.1;locus_tag=PHA56_RS19275;product=transcriptional regulator CecR;protein_id=WP_271292932.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4065374 4066366 . + . ID=gene-PHA56_RS19280;Name=hlyD;gbkey=Gene;gene=hlyD;gene_biotype=protein_coding;locus_tag=PHA56_RS19280;old_locus_tag=PHA56_19280 NZ_CP116214.1 Protein Homology CDS 4065374 4066366 . + 0 ID=cds-WP_014228502.1;Parent=gene-PHA56_RS19280;Dbxref=Genbank:WP_014228502.1;Name=WP_014228502.1;gbkey=CDS;gene=hlyD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004135228.1;locus_tag=PHA56_RS19280;product=secretion protein HlyD;protein_id=WP_014228502.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4066363 4068102 . + . ID=gene-PHA56_RS19285;Name=PHA56_RS19285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS19285;old_locus_tag=PHA56_19285 NZ_CP116214.1 Protein Homology CDS 4066363 4068102 . + 0 ID=cds-WP_042944679.1;Parent=gene-PHA56_RS19285;Dbxref=Genbank:WP_042944679.1;Name=WP_042944679.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225949.1;locus_tag=PHA56_RS19285;product=ATP-binding cassette domain-containing protein;protein_id=WP_042944679.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4068092 4069225 . + . ID=gene-PHA56_RS19290;Name=PHA56_RS19290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS19290;old_locus_tag=PHA56_19290 NZ_CP116214.1 Protein Homology CDS 4068092 4069225 . + 0 ID=cds-WP_014228500.1;Parent=gene-PHA56_RS19290;Dbxref=Genbank:WP_014228500.1;Name=WP_014228500.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225948.1;locus_tag=PHA56_RS19290;product=ABC transporter permease;protein_id=WP_014228500.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4069317 4070423 . + . ID=gene-PHA56_RS19295;Name=PHA56_RS19295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS19295;old_locus_tag=PHA56_19295 NZ_CP116214.1 Protein Homology CDS 4069317 4070423 . + 0 ID=cds-WP_004849064.1;Parent=gene-PHA56_RS19295;Dbxref=Genbank:WP_004849064.1;Name=WP_004849064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225947.1;locus_tag=PHA56_RS19295;product=ABC transporter permease;protein_id=WP_004849064.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4070484 4070921 . - . ID=gene-PHA56_RS19300;Name=PHA56_RS19300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS19300;old_locus_tag=PHA56_19300 NZ_CP116214.1 Protein Homology CDS 4070484 4070921 . - 0 ID=cds-WP_004130686.1;Parent=gene-PHA56_RS19300;Dbxref=Genbank:WP_004130686.1;Name=WP_004130686.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004130686.1;locus_tag=PHA56_RS19300;product=YbhQ family protein;protein_id=WP_004130686.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4071065 4071814 . + . ID=gene-PHA56_RS19305;Name=PHA56_RS19305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS19305;old_locus_tag=PHA56_19305 NZ_CP116214.1 Protein Homology CDS 4071065 4071814 . + 0 ID=cds-WP_014228498.1;Parent=gene-PHA56_RS19305;Dbxref=Genbank:WP_014228498.1;Name=WP_014228498.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004130684.1;locus_tag=PHA56_RS19305;product=endonuclease/exonuclease/phosphatase family protein;protein_id=WP_014228498.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4071811 4073055 . + . ID=gene-PHA56_RS19310;Name=clsB;gbkey=Gene;gene=clsB;gene_biotype=protein_coding;locus_tag=PHA56_RS19310;old_locus_tag=PHA56_19310 NZ_CP116214.1 Protein Homology CDS 4071811 4073055 . + 0 ID=cds-WP_014837867.1;Parent=gene-PHA56_RS19310;Dbxref=Genbank:WP_014837867.1;Name=WP_014837867.1;Ontology_term=GO:0032049,GO:0008808;gbkey=CDS;gene=clsB;go_function=cardiolipin synthase activity|0008808||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004135240.1;locus_tag=PHA56_RS19310;product=cardiolipin synthase ClsB;protein_id=WP_014837867.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4073055 4074020 . + . ID=gene-PHA56_RS19315;Name=PHA56_RS19315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS19315;old_locus_tag=PHA56_19315 NZ_CP116214.1 Protein Homology CDS 4073055 4074020 . + 0 ID=cds-WP_042944677.1;Parent=gene-PHA56_RS19315;Dbxref=Genbank:WP_042944677.1;Name=WP_042944677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225943.1;locus_tag=PHA56_RS19315;product=lysylphosphatidylglycerol synthase domain-containing protein;protein_id=WP_042944677.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4074091 4074795 . - . ID=gene-PHA56_RS19320;Name=PHA56_RS19320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS19320;old_locus_tag=PHA56_19320 NZ_CP116214.1 Protein Homology CDS 4074091 4074795 . - 0 ID=cds-WP_004849060.1;Parent=gene-PHA56_RS19320;Dbxref=Genbank:WP_004849060.1;Name=WP_004849060.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459785.1;locus_tag=PHA56_RS19320;product=Bax inhibitor-1/YccA family protein;protein_id=WP_004849060.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4074840 4075292 . - . ID=gene-PHA56_RS19325;Name=moaE;gbkey=Gene;gene=moaE;gene_biotype=protein_coding;locus_tag=PHA56_RS19325;old_locus_tag=PHA56_19325 NZ_CP116214.1 Protein Homology CDS 4074840 4075292 . - 0 ID=cds-WP_004849058.1;Parent=gene-PHA56_RS19325;Dbxref=Genbank:WP_004849058.1;Name=WP_004849058.1;Ontology_term=GO:0006777;gbkey=CDS;gene=moaE;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225941.1;locus_tag=PHA56_RS19325;product=molybdopterin synthase catalytic subunit MoaE;protein_id=WP_004849058.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4075294 4075542 . - . ID=gene-PHA56_RS19330;Name=moaD;gbkey=Gene;gene=moaD;gene_biotype=protein_coding;locus_tag=PHA56_RS19330;old_locus_tag=PHA56_19330 NZ_CP116214.1 Protein Homology CDS 4075294 4075542 . - 0 ID=cds-WP_014837865.1;Parent=gene-PHA56_RS19330;Dbxref=Genbank:WP_014837865.1;Name=WP_014837865.1;Ontology_term=GO:0006777;gbkey=CDS;gene=moaD;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225940.1;locus_tag=PHA56_RS19330;product=molybdopterin synthase sulfur carrier subunit;protein_id=WP_014837865.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4075535 4076023 . - . ID=gene-PHA56_RS19335;Name=moaC;gbkey=Gene;gene=moaC;gene_biotype=protein_coding;locus_tag=PHA56_RS19335;old_locus_tag=PHA56_19335 NZ_CP116214.1 Protein Homology CDS 4075535 4076023 . - 0 ID=cds-WP_014228494.1;Parent=gene-PHA56_RS19335;Dbxref=Genbank:WP_014228494.1;Name=WP_014228494.1;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;gene=moaC;go_function=catalytic activity|0003824||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225939.1;locus_tag=PHA56_RS19335;product=cyclic pyranopterin monophosphate synthase MoaC;protein_id=WP_014228494.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4076027 4076539 . - . ID=gene-PHA56_RS19340;Name=moaB;gbkey=Gene;gene=moaB;gene_biotype=protein_coding;locus_tag=PHA56_RS19340;old_locus_tag=PHA56_19340 NZ_CP116214.1 Protein Homology CDS 4076027 4076539 . - 0 ID=cds-WP_009653795.1;Parent=gene-PHA56_RS19340;Dbxref=Genbank:WP_009653795.1;Name=WP_009653795.1;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;gene=moaB;go_function=catalytic activity|0003824||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123739.1;locus_tag=PHA56_RS19340;product=molybdenum cofactor biosynthesis protein B;protein_id=WP_009653795.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4076561 4077550 . - . ID=gene-PHA56_RS19345;Name=moaA;gbkey=Gene;gene=moaA;gene_biotype=protein_coding;locus_tag=PHA56_RS19345;old_locus_tag=PHA56_19345 NZ_CP116214.1 Protein Homology CDS 4076561 4077550 . - 0 ID=cds-WP_014228493.1;Parent=gene-PHA56_RS19345;Dbxref=Genbank:WP_014228493.1;Name=WP_014228493.1;Ontology_term=GO:0006777,GO:0051539;gbkey=CDS;gene=moaA;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225937.1;locus_tag=PHA56_RS19345;product=GTP 3'%2C8-cyclase MoaA;protein_id=WP_014228493.1;transl_table=11 NZ_CP116214.1 cmsearch riboswitch 4077538 4077676 . - . ID=id-NZ_CP116214.1:4077538..4077676;Dbxref=RFAM:RF01055;Note=molybdenum cofactor riboswitch;bound_moiety=molybdenum cofactor;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NZ_CP116214.1 RefSeq gene 4077886 4078791 . + . ID=gene-PHA56_RS19350;Name=yvcK;gbkey=Gene;gene=yvcK;gene_biotype=protein_coding;locus_tag=PHA56_RS19350;old_locus_tag=PHA56_19350 NZ_CP116214.1 Protein Homology CDS 4077886 4078791 . + 0 ID=cds-WP_042944674.1;Parent=gene-PHA56_RS19350;Dbxref=Genbank:WP_042944674.1;Name=WP_042944674.1;gbkey=CDS;gene=yvcK;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225936.1;locus_tag=PHA56_RS19350;product=uridine diphosphate-N-acetylglucosamine-binding protein YvcK;protein_id=WP_042944674.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4078902 4080545 . + . ID=gene-PHA56_RS19355;Name=eptA;gbkey=Gene;gene=eptA;gene_biotype=protein_coding;locus_tag=PHA56_RS19355;old_locus_tag=PHA56_19355 NZ_CP116214.1 Protein Homology CDS 4078902 4080545 . + 0 ID=cds-WP_025108112.1;Parent=gene-PHA56_RS19355;Dbxref=Genbank:WP_025108112.1;Name=WP_025108112.1;Ontology_term=GO:0016772;gbkey=CDS;gene=eptA;go_function=transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014228491.1;locus_tag=PHA56_RS19355;product=phosphoethanolamine transferase EptA;protein_id=WP_025108112.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4080542 4081213 . + . ID=gene-PHA56_RS19360;Name=pmrA;gbkey=Gene;gene=pmrA;gene_biotype=protein_coding;locus_tag=PHA56_RS19360;old_locus_tag=PHA56_19360 NZ_CP116214.1 Protein Homology CDS 4080542 4081213 . + 0 ID=cds-WP_004849045.1;Parent=gene-PHA56_RS19360;Dbxref=Genbank:WP_004849045.1;Name=WP_004849045.1;gbkey=CDS;gene=pmrA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225934.1;locus_tag=PHA56_RS19360;product=two-component system response regulator PmrA;protein_id=WP_004849045.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4081218 4082315 . + . ID=gene-PHA56_RS19365;Name=pmrB;gbkey=Gene;gene=pmrB;gene_biotype=protein_coding;locus_tag=PHA56_RS19365;old_locus_tag=PHA56_19365 NZ_CP116214.1 Protein Homology CDS 4081218 4082315 . + 0 ID=cds-WP_014228490.1;Parent=gene-PHA56_RS19365;Dbxref=Genbank:WP_014228490.1;Name=WP_014228490.1;gbkey=CDS;gene=pmrB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004111547.1;locus_tag=PHA56_RS19365;product=two-component system sensor histidine kinase PmrB;protein_id=WP_014228490.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4082630 4084645 . - . ID=gene-PHA56_RS19370;Name=uvrB;gbkey=Gene;gene=uvrB;gene_biotype=protein_coding;locus_tag=PHA56_RS19370;old_locus_tag=PHA56_19370 NZ_CP116214.1 Protein Homology CDS 4082630 4084645 . - 0 ID=cds-WP_038424235.1;Parent=gene-PHA56_RS19370;Dbxref=Genbank:WP_038424235.1;Name=WP_038424235.1;Ontology_term=GO:0006289,GO:0009381,GO:0009380;gbkey=CDS;gene=uvrB;go_component=excinuclease repair complex|0009380||IEA;go_function=excinuclease ABC activity|0009381||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123745.1;locus_tag=PHA56_RS19370;product=excinuclease ABC subunit UvrB;protein_id=WP_038424235.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4085357 4086079 . + . ID=gene-PHA56_RS19375;Name=PHA56_RS19375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS19375;old_locus_tag=PHA56_19375 NZ_CP116214.1 Protein Homology CDS 4085357 4086079 . + 0 ID=cds-WP_014228488.1;Parent=gene-PHA56_RS19375;Dbxref=Genbank:WP_014228488.1;Name=WP_014228488.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004100417.1;locus_tag=PHA56_RS19375;product=ATP-binding cassette domain-containing protein;protein_id=WP_014228488.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4086021 4086743 . - . ID=gene-PHA56_RS19380;Name=bioD;gbkey=Gene;gene=bioD;gene_biotype=protein_coding;locus_tag=PHA56_RS19380;old_locus_tag=PHA56_19380 NZ_CP116214.1 Protein Homology CDS 4086021 4086743 . - 0 ID=cds-WP_014837861.1;Parent=gene-PHA56_RS19380;Dbxref=Genbank:WP_014837861.1;Name=WP_014837861.1;Ontology_term=GO:0009102,GO:0004141;gbkey=CDS;gene=bioD;go_function=dethiobiotin synthase activity|0004141||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014228487.1;locus_tag=PHA56_RS19380;product=dethiobiotin synthase;protein_id=WP_014837861.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4086736 4087491 . - . ID=gene-PHA56_RS19385;Name=bioC;gbkey=Gene;gene=bioC;gene_biotype=protein_coding;locus_tag=PHA56_RS19385;old_locus_tag=PHA56_19385 NZ_CP116214.1 Protein Homology CDS 4086736 4087491 . - 0 ID=cds-WP_032718698.1;Parent=gene-PHA56_RS19385;Dbxref=Genbank:WP_032718698.1;Name=WP_032718698.1;Ontology_term=GO:0009102,GO:0010340;gbkey=CDS;gene=bioC;go_function=carboxyl-O-methyltransferase activity|0010340||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225929.1;locus_tag=PHA56_RS19385;product=malonyl-ACP O-methyltransferase BioC;protein_id=WP_032718698.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4087475 4088632 . - . ID=gene-PHA56_RS19390;Name=bioF;gbkey=Gene;gene=bioF;gene_biotype=protein_coding;locus_tag=PHA56_RS19390;old_locus_tag=PHA56_19390 NZ_CP116214.1 Protein Homology CDS 4087475 4088632 . - 0 ID=cds-WP_032718699.1;Parent=gene-PHA56_RS19390;Dbxref=Genbank:WP_032718699.1;Name=WP_032718699.1;Ontology_term=GO:0009102,GO:0008710;gbkey=CDS;gene=bioF;go_function=8-amino-7-oxononanoate synthase activity|0008710||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225928.1;locus_tag=PHA56_RS19390;product=8-amino-7-oxononanoate synthase;protein_id=WP_032718699.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4088629 4089669 . - . ID=gene-PHA56_RS19395;Name=bioB;gbkey=Gene;gene=bioB;gene_biotype=protein_coding;locus_tag=PHA56_RS19395;old_locus_tag=PHA56_19395 NZ_CP116214.1 Protein Homology CDS 4088629 4089669 . - 0 ID=cds-WP_014228484.1;Parent=gene-PHA56_RS19395;Dbxref=Genbank:WP_014228484.1;Name=WP_014228484.1;Ontology_term=GO:0009102,GO:0004076,GO:0051537,GO:0051539,GO:1904047;gbkey=CDS;gene=bioB;go_function=biotin synthase activity|0004076||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415296.1;locus_tag=PHA56_RS19395;product=biotin synthase BioB;protein_id=WP_014228484.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4089755 4091044 . + . ID=gene-PHA56_RS19400;Name=bioA;gbkey=Gene;gene=bioA;gene_biotype=protein_coding;locus_tag=PHA56_RS19400;old_locus_tag=PHA56_19400 NZ_CP116214.1 Protein Homology CDS 4089755 4091044 . + 0 ID=cds-WP_038424950.1;Parent=gene-PHA56_RS19400;Dbxref=Genbank:WP_038424950.1;Name=WP_038424950.1;Ontology_term=GO:0009102,GO:0004015,GO:0030170;gbkey=CDS;gene=bioA;go_function=adenosylmethionine-8-amino-7-oxononanoate transaminase activity|0004015||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225926.1;locus_tag=PHA56_RS19400;product=adenosylmethionine--8-amino-7-oxononanoate transaminase;protein_id=WP_038424950.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4091114 4091590 . + . ID=gene-PHA56_RS19405;Name=PHA56_RS19405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS19405;old_locus_tag=PHA56_19405 NZ_CP116214.1 Protein Homology CDS 4091114 4091590 . + 0 ID=cds-WP_009653774.1;Parent=gene-PHA56_RS19405;Dbxref=Genbank:WP_009653774.1;Name=WP_009653774.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225925.1;locus_tag=PHA56_RS19405;product=kinase inhibitor;protein_id=WP_009653774.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4091690 4093072 . - . ID=gene-PHA56_RS19410;Name=PHA56_RS19410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS19410;old_locus_tag=PHA56_19410 NZ_CP116214.1 Protein Homology CDS 4091690 4093072 . - 0 ID=cds-WP_004849033.1;Parent=gene-PHA56_RS19410;Dbxref=Genbank:WP_004849033.1;Name=WP_004849033.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004849033.1;locus_tag=PHA56_RS19410;product=amino acid permease;protein_id=WP_004849033.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4093185 4094708 . - . ID=gene-PHA56_RS19415;Name=hutH;gbkey=Gene;gene=hutH;gene_biotype=protein_coding;locus_tag=PHA56_RS19415;old_locus_tag=PHA56_19415 NZ_CP116214.1 Protein Homology CDS 4093185 4094708 . - 0 ID=cds-WP_014228482.1;Parent=gene-PHA56_RS19415;Dbxref=Genbank:WP_014228482.1;Name=WP_014228482.1;Ontology_term=GO:0006548,GO:0004397;gbkey=CDS;gene=hutH;go_function=histidine ammonia-lyase activity|0004397||IEA;go_process=histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014228482.1;locus_tag=PHA56_RS19415;product=histidine ammonia-lyase;protein_id=WP_014228482.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4094705 4096393 . - . ID=gene-PHA56_RS19420;Name=hutU;gbkey=Gene;gene=hutU;gene_biotype=protein_coding;locus_tag=PHA56_RS19420;old_locus_tag=PHA56_19420 NZ_CP116214.1 Protein Homology CDS 4094705 4096393 . - 0 ID=cds-WP_038423256.1;Parent=gene-PHA56_RS19420;Dbxref=Genbank:WP_038423256.1;Name=WP_038423256.1;Ontology_term=GO:0006548,GO:0016153;gbkey=CDS;gene=hutU;go_function=urocanate hydratase activity|0016153||IEA;go_process=histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015367623.1;locus_tag=PHA56_RS19420;product=urocanate hydratase;protein_id=WP_038423256.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4096537 4097262 . - . ID=gene-PHA56_RS19425;Name=PHA56_RS19425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS19425;old_locus_tag=PHA56_19425 NZ_CP116214.1 Protein Homology CDS 4096537 4097262 . - 0 ID=cds-WP_014228480.1;Parent=gene-PHA56_RS19425;Dbxref=Genbank:WP_014228480.1;Name=WP_014228480.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225920.1;locus_tag=PHA56_RS19425;product=histidine utilization repressor;protein_id=WP_014228480.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4097403 4098674 . - . ID=gene-PHA56_RS19430;Name=hutI;gbkey=Gene;gene=hutI;gene_biotype=protein_coding;locus_tag=PHA56_RS19430;old_locus_tag=PHA56_19430 NZ_CP116214.1 Protein Homology CDS 4097403 4098674 . - 0 ID=cds-WP_224266767.1;Parent=gene-PHA56_RS19430;Dbxref=Genbank:WP_224266767.1;Name=WP_224266767.1;Ontology_term=GO:0006548,GO:0050480;gbkey=CDS;gene=hutI;go_function=imidazolonepropionase activity|0050480||IEA;go_process=histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225918.1;locus_tag=PHA56_RS19430;product=imidazolonepropionase;protein_id=WP_224266767.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4098851 4100134 . + . ID=gene-PHA56_RS19435;Name=PHA56_RS19435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS19435;old_locus_tag=PHA56_19435 NZ_CP116214.1 Protein Homology CDS 4098851 4100134 . + 0 ID=cds-WP_032694535.1;Parent=gene-PHA56_RS19435;Dbxref=Genbank:WP_032694535.1;Name=WP_032694535.1;Ontology_term=GO:0042545,GO:0030599;gbkey=CDS;go_function=pectinesterase activity|0030599||IEA;go_process=cell wall modification|0042545||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225917.1;locus_tag=PHA56_RS19435;product=putative acyl-CoA thioester hydrolase;protein_id=WP_032694535.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4100548 4100766 . + . ID=gene-PHA56_RS19440;Name=PHA56_RS19440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS19440;old_locus_tag=PHA56_19440 NZ_CP116214.1 Protein Homology CDS 4100548 4100766 . + 0 ID=cds-WP_014228477.1;Parent=gene-PHA56_RS19440;Dbxref=Genbank:WP_014228477.1;Name=WP_014228477.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002895280.1;locus_tag=PHA56_RS19440;product=hypothetical protein;protein_id=WP_014228477.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4100825 4101379 . + . ID=gene-PHA56_RS19445;Name=PHA56_RS19445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS19445;old_locus_tag=PHA56_19445 NZ_CP116214.1 Protein Homology CDS 4100825 4101379 . + 0 ID=cds-WP_004849021.1;Parent=gene-PHA56_RS19445;Dbxref=Genbank:WP_004849021.1;Name=WP_004849021.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004130629.1;locus_tag=PHA56_RS19445;product=LuxR C-terminal-related transcriptional regulator;protein_id=WP_004849021.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4101474 4102205 . - . ID=gene-PHA56_RS19450;Name=PHA56_RS19450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS19450;old_locus_tag=PHA56_19450 NZ_CP116214.1 Protein Homology CDS 4101474 4102205 . - 0 ID=cds-WP_014228475.1;Parent=gene-PHA56_RS19450;Dbxref=Genbank:WP_014228475.1;Name=WP_014228475.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014228475.1;locus_tag=PHA56_RS19450;product=MerR family transcriptional regulator;protein_id=WP_014228475.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4102394 4103617 . - . ID=gene-PHA56_RS19455;Name=PHA56_RS19455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS19455;old_locus_tag=PHA56_19455 NZ_CP116214.1 Protein Homology CDS 4102394 4103617 . - 0 ID=cds-WP_014228474.1;Parent=gene-PHA56_RS19455;Dbxref=Genbank:WP_014228474.1;Name=WP_014228474.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004111512.1;locus_tag=PHA56_RS19455;product=diguanylate phosphodiesterase;protein_id=WP_014228474.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4103953 4104195 . + . ID=gene-PHA56_RS19460;Name=ycgZ;gbkey=Gene;gene=ycgZ;gene_biotype=protein_coding;locus_tag=PHA56_RS19460;old_locus_tag=PHA56_19460 NZ_CP116214.1 Protein Homology CDS 4103953 4104195 . + 0 ID=cds-WP_004849015.1;Parent=gene-PHA56_RS19460;Dbxref=Genbank:WP_004849015.1;Name=WP_004849015.1;gbkey=CDS;gene=ycgZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004849015.1;locus_tag=PHA56_RS19460;product=regulatory protein YcgZ;protein_id=WP_004849015.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4104317 4104640 . + . ID=gene-PHA56_RS19465;Name=PHA56_RS19465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS19465;old_locus_tag=PHA56_19465 NZ_CP116214.1 Protein Homology CDS 4104317 4104640 . + 0 ID=cds-WP_032694536.1;Parent=gene-PHA56_RS19465;Dbxref=Genbank:WP_032694536.1;Name=WP_032694536.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014228473.1;locus_tag=PHA56_RS19465;product=hypothetical protein;protein_id=WP_032694536.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4104695 4104961 . + . ID=gene-PHA56_RS19470;Name=PHA56_RS19470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS19470;old_locus_tag=PHA56_19470 NZ_CP116214.1 Protein Homology CDS 4104695 4104961 . + 0 ID=cds-WP_004849010.1;Parent=gene-PHA56_RS19470;Dbxref=Genbank:WP_004849010.1;Name=WP_004849010.1;Ontology_term=GO:0071468;gbkey=CDS;go_process=cellular response to acidic pH|0071468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225906.1;locus_tag=PHA56_RS19470;product=biofilm development regulator YmgB/AriR family protein;protein_id=WP_004849010.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4105205 4106674 . - . ID=gene-PHA56_RS19475;Name=PHA56_RS19475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS19475;old_locus_tag=PHA56_19475 NZ_CP116214.1 Protein Homology CDS 4105205 4106674 . - 0 ID=cds-WP_025108125.1;Parent=gene-PHA56_RS19475;Dbxref=Genbank:WP_025108125.1;Name=WP_025108125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014228472.1;locus_tag=PHA56_RS19475;product=PLP-dependent aminotransferase family protein;protein_id=WP_025108125.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4106808 4107284 . + . ID=gene-PHA56_RS19480;Name=PHA56_RS19480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS19480;old_locus_tag=PHA56_19480 NZ_CP116214.1 Protein Homology CDS 4106808 4107284 . + 0 ID=cds-WP_038424232.1;Parent=gene-PHA56_RS19480;Dbxref=Genbank:WP_038424232.1;Name=WP_038424232.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009653351.1;locus_tag=PHA56_RS19480;product=GNAT family N-acetyltransferase;protein_id=WP_038424232.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4107343 4108338 . - . ID=gene-PHA56_RS19485;Name=pgl;gbkey=Gene;gene=pgl;gene_biotype=protein_coding;locus_tag=PHA56_RS19485;old_locus_tag=PHA56_19485 NZ_CP116214.1 Protein Homology CDS 4107343 4108338 . - 0 ID=cds-WP_014228470.1;Parent=gene-PHA56_RS19485;Dbxref=Genbank:WP_014228470.1;Name=WP_014228470.1;Ontology_term=GO:0017057;gbkey=CDS;gene=pgl;go_function=6-phosphogluconolactonase activity|0017057||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014837853.1;locus_tag=PHA56_RS19485;product=6-phosphogluconolactonase;protein_id=WP_014228470.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4108560 4109378 . + . ID=gene-PHA56_RS19490;Name=PHA56_RS19490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS19490;old_locus_tag=PHA56_19490 NZ_CP116214.1 Protein Homology CDS 4108560 4109378 . + 0 ID=cds-WP_038424231.1;Parent=gene-PHA56_RS19490;Dbxref=Genbank:WP_038424231.1;Name=WP_038424231.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225904.1;locus_tag=PHA56_RS19490;product=pyridoxal phosphatase;protein_id=WP_038424231.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4109379 4110437 . - . ID=gene-PHA56_RS19495;Name=modC;gbkey=Gene;gene=modC;gene_biotype=protein_coding;locus_tag=PHA56_RS19495;old_locus_tag=PHA56_19495 NZ_CP116214.1 Protein Homology CDS 4109379 4110437 . - 0 ID=cds-WP_038424230.1;Parent=gene-PHA56_RS19495;Dbxref=Genbank:WP_038424230.1;Name=WP_038424230.1;Ontology_term=GO:0015689,GO:0005524,GO:0015098,GO:0016020;gbkey=CDS;gene=modC;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,molybdate ion transmembrane transporter activity|0015098||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225903.1;locus_tag=PHA56_RS19495;product=molybdenum ABC transporter ATP-binding protein ModC;protein_id=WP_038424230.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4110440 4111129 . - . ID=gene-PHA56_RS19500;Name=modB;gbkey=Gene;gene=modB;gene_biotype=protein_coding;locus_tag=PHA56_RS19500;old_locus_tag=PHA56_19500 NZ_CP116214.1 Protein Homology CDS 4110440 4111129 . - 0 ID=cds-WP_004848997.1;Parent=gene-PHA56_RS19500;Dbxref=Genbank:WP_004848997.1;Name=WP_004848997.1;Ontology_term=GO:0015689,GO:0015098,GO:0016020;gbkey=CDS;gene=modB;go_component=membrane|0016020||IEA;go_function=molybdate ion transmembrane transporter activity|0015098||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459761.1;locus_tag=PHA56_RS19500;product=molybdate ABC transporter permease subunit;protein_id=WP_004848997.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4111129 4111902 . - . ID=gene-PHA56_RS19505;Name=modA;gbkey=Gene;gene=modA;gene_biotype=protein_coding;locus_tag=PHA56_RS19505;old_locus_tag=PHA56_19505 NZ_CP116214.1 Protein Homology CDS 4111129 4111902 . - 0 ID=cds-WP_014228467.1;Parent=gene-PHA56_RS19505;Dbxref=Genbank:WP_014228467.1;Name=WP_014228467.1;Ontology_term=GO:0015689;gbkey=CDS;gene=modA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020884947.1;locus_tag=PHA56_RS19505;product=molybdate ABC transporter substrate-binding protein;protein_id=WP_014228467.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4112047 4112196 . - . ID=gene-PHA56_RS19510;Name=PHA56_RS19510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS19510;old_locus_tag=PHA56_19510 NZ_CP116214.1 Protein Homology CDS 4112047 4112196 . - 0 ID=cds-WP_004848993.1;Parent=gene-PHA56_RS19510;Dbxref=Genbank:WP_004848993.1;Name=WP_004848993.1;Ontology_term=GO:1990961,GO:0042910,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225900.1;locus_tag=PHA56_RS19510;product=AcrZ family multidrug efflux pump-associated protein;protein_id=WP_004848993.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4112350 4113138 . + . ID=gene-PHA56_RS19515;Name=modE;gbkey=Gene;gene=modE;gene_biotype=protein_coding;locus_tag=PHA56_RS19515;old_locus_tag=PHA56_19515 NZ_CP116214.1 Protein Homology CDS 4112350 4113138 . + 0 ID=cds-WP_004848991.1;Parent=gene-PHA56_RS19515;Dbxref=Genbank:WP_004848991.1;Name=WP_004848991.1;Ontology_term=GO:0006355,GO:0015689,GO:0003700,GO:0030151;gbkey=CDS;gene=modE;go_function=DNA-binding transcription factor activity|0003700||IEA,molybdenum ion binding|0030151||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225899.1;locus_tag=PHA56_RS19515;product=molybdenum-dependent transcriptional regulator;protein_id=WP_004848991.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4113206 4114675 . + . ID=gene-PHA56_RS19520;Name=modF;gbkey=Gene;gene=modF;gene_biotype=protein_coding;locus_tag=PHA56_RS19520;old_locus_tag=PHA56_19520 NZ_CP116214.1 Protein Homology CDS 4113206 4114675 . + 0 ID=cds-WP_014837851.1;Parent=gene-PHA56_RS19520;Dbxref=Genbank:WP_014837851.1;Name=WP_014837851.1;Ontology_term=GO:0005524;gbkey=CDS;gene=modF;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004848989.1;locus_tag=PHA56_RS19520;product=molybdate ABC transporter ATP-binding protein ModF;protein_id=WP_014837851.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4114887 4115903 . + . ID=gene-PHA56_RS19525;Name=galE;gbkey=Gene;gene=galE;gene_biotype=protein_coding;locus_tag=PHA56_RS19525;old_locus_tag=PHA56_19525 NZ_CP116214.1 Protein Homology CDS 4114887 4115903 . + 0 ID=cds-WP_004130603.1;Parent=gene-PHA56_RS19525;Dbxref=Genbank:WP_004130603.1;Name=WP_004130603.1;Ontology_term=GO:0006012,GO:0003978;gbkey=CDS;gene=galE;go_function=UDP-glucose 4-epimerase activity|0003978||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225895.1;locus_tag=PHA56_RS19525;product=UDP-glucose 4-epimerase GalE;protein_id=WP_004130603.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4115913 4116959 . + . ID=gene-PHA56_RS19530;Name=galT;gbkey=Gene;gene=galT;gene_biotype=protein_coding;locus_tag=PHA56_RS19530;old_locus_tag=PHA56_19530 NZ_CP116214.1 Protein Homology CDS 4115913 4116959 . + 0 ID=cds-WP_014228465.1;Parent=gene-PHA56_RS19530;Dbxref=Genbank:WP_014228465.1;Name=WP_014228465.1;Ontology_term=GO:0006012,GO:0008108;gbkey=CDS;gene=galT;go_function=UDP-glucose:hexose-1-phosphate uridylyltransferase activity|0008108||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225894.1;locus_tag=PHA56_RS19530;product=galactose-1-phosphate uridylyltransferase;protein_id=WP_014228465.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4116962 4118110 . + . ID=gene-PHA56_RS19535;Name=galK;gbkey=Gene;gene=galK;gene_biotype=protein_coding;locus_tag=PHA56_RS19535;old_locus_tag=PHA56_19535 NZ_CP116214.1 Protein Homology CDS 4116962 4118110 . + 0 ID=cds-WP_032694538.1;Parent=gene-PHA56_RS19535;Dbxref=Genbank:WP_032694538.1;Name=WP_032694538.1;Ontology_term=GO:0006012,GO:0046835,GO:0004335,GO:0005524;gbkey=CDS;gene=galK;go_function=galactokinase activity|0004335||IEA,ATP binding|0005524||IEA;go_process=galactose metabolic process|0006012||IEA,carbohydrate phosphorylation|0046835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001713229.1;locus_tag=PHA56_RS19535;product=galactokinase;protein_id=WP_032694538.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4118104 4119147 . + . ID=gene-PHA56_RS19540;Name=galM;gbkey=Gene;gene=galM;gene_biotype=protein_coding;locus_tag=PHA56_RS19540;old_locus_tag=PHA56_19540 NZ_CP116214.1 Protein Homology CDS 4118104 4119147 . + 0 ID=cds-WP_032694539.1;Parent=gene-PHA56_RS19540;Dbxref=Genbank:WP_032694539.1;Name=WP_032694539.1;Ontology_term=GO:0006012,GO:0004034;gbkey=CDS;gene=galM;go_function=aldose 1-epimerase activity|0004034||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225892.1;locus_tag=PHA56_RS19540;product=galactose-1-epimerase;protein_id=WP_032694539.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4119403 4120155 . + . ID=gene-PHA56_RS19545;Name=gpmA;gbkey=Gene;gene=gpmA;gene_biotype=protein_coding;locus_tag=PHA56_RS19545;old_locus_tag=PHA56_19545 NZ_CP116214.1 Protein Homology CDS 4119403 4120155 . + 0 ID=cds-WP_004100351.1;Parent=gene-PHA56_RS19545;Dbxref=Genbank:WP_004100351.1;Name=WP_004100351.1;Ontology_term=GO:0006096,GO:0004619;gbkey=CDS;gene=gpmA;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000301556.1;locus_tag=PHA56_RS19545;product=2%2C3-diphosphoglycerate-dependent phosphoglycerate mutase;protein_id=WP_004100351.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4120223 4121275 . - . ID=gene-PHA56_RS19550;Name=aroG;gbkey=Gene;gene=aroG;gene_biotype=protein_coding;locus_tag=PHA56_RS19550;old_locus_tag=PHA56_19550 NZ_CP116214.1 Protein Homology CDS 4120223 4121275 . - 0 ID=cds-WP_014228462.1;Parent=gene-PHA56_RS19550;Dbxref=Genbank:WP_014228462.1;Name=WP_014228462.1;gbkey=CDS;gene=aroG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001109196.1;locus_tag=PHA56_RS19550;product=3-deoxy-7-phosphoheptulonate synthase AroG;protein_id=WP_014228462.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4121590 4121961 . + . ID=gene-PHA56_RS19555;Name=PHA56_RS19555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS19555;old_locus_tag=PHA56_19555 NZ_CP116214.1 Protein Homology CDS 4121590 4121961 . + 0 ID=cds-WP_014228461.1;Parent=gene-PHA56_RS19555;Dbxref=Genbank:WP_014228461.1;Name=WP_014228461.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225889.1;locus_tag=PHA56_RS19555;product=YbgS-like family protein;protein_id=WP_014228461.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4122079 4123023 . + . ID=gene-PHA56_RS19560;Name=zitB;gbkey=Gene;gene=zitB;gene_biotype=protein_coding;locus_tag=PHA56_RS19560;old_locus_tag=PHA56_19560 NZ_CP116214.1 Protein Homology CDS 4122079 4123023 . + 0 ID=cds-WP_014228460.1;Parent=gene-PHA56_RS19560;Dbxref=Genbank:WP_014228460.1;Name=WP_014228460.1;Ontology_term=GO:0006829,GO:0055085,GO:0005385,GO:0016020;gbkey=CDS;gene=zitB;go_component=membrane|0016020||IEA;go_function=zinc ion transmembrane transporter activity|0005385||IEA;go_process=zinc ion transport|0006829||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225888.1;locus_tag=PHA56_RS19560;product=CDF family zinc transporter ZitB;protein_id=WP_014228460.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4123020 4123739 . - . ID=gene-PHA56_RS19565;Name=pnuC;gbkey=Gene;gene=pnuC;gene_biotype=protein_coding;locus_tag=PHA56_RS19565;old_locus_tag=PHA56_19565 NZ_CP116214.1 Protein Homology CDS 4123020 4123739 . - 0 ID=cds-WP_014228459.1;Parent=gene-PHA56_RS19565;Dbxref=Genbank:WP_014228459.1;Name=WP_014228459.1;Ontology_term=GO:0015890,GO:0015663,GO:0016020;gbkey=CDS;gene=pnuC;go_component=membrane|0016020||IEA;go_function=nicotinamide mononucleotide transmembrane transporter activity|0015663||IEA;go_process=nicotinamide mononucleotide transport|0015890||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459737.1;locus_tag=PHA56_RS19565;product=nicotinamide riboside transporter PnuC;protein_id=WP_014228459.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4123775 4124818 . - . ID=gene-PHA56_RS19570;Name=nadA;gbkey=Gene;gene=nadA;gene_biotype=protein_coding;locus_tag=PHA56_RS19570;old_locus_tag=PHA56_19570 NZ_CP116214.1 Protein Homology CDS 4123775 4124818 . - 0 ID=cds-WP_004848967.1;Parent=gene-PHA56_RS19570;Dbxref=Genbank:WP_004848967.1;Name=WP_004848967.1;Ontology_term=GO:0009435,GO:0008987,GO:0051539;gbkey=CDS;gene=nadA;go_function=quinolinate synthetase A activity|0008987||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004176847.1;locus_tag=PHA56_RS19570;product=quinolinate synthase NadA;protein_id=WP_004848967.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4125265 4125340 . - . ID=gene-PHA56_RS19575;Name=PHA56_RS19575;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA56_RS19575;old_locus_tag=PHA56_19575 NZ_CP116214.1 tRNAscan-SE tRNA 4125265 4125340 . - . ID=rna-PHA56_RS19575;Parent=gene-PHA56_RS19575;anticodon=(pos:complement(4125305..4125307));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS19575;product=tRNA-Lys NZ_CP116214.1 tRNAscan-SE exon 4125265 4125340 . - . ID=exon-PHA56_RS19575-1;Parent=rna-PHA56_RS19575;anticodon=(pos:complement(4125305..4125307));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS19575;product=tRNA-Lys NZ_CP116214.1 RefSeq gene 4125474 4125549 . - . ID=gene-PHA56_RS19580;Name=PHA56_RS19580;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA56_RS19580;old_locus_tag=PHA56_19580 NZ_CP116214.1 tRNAscan-SE tRNA 4125474 4125549 . - . ID=rna-PHA56_RS19580;Parent=gene-PHA56_RS19580;anticodon=(pos:complement(4125514..4125516));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS19580;product=tRNA-Lys NZ_CP116214.1 tRNAscan-SE exon 4125474 4125549 . - . ID=exon-PHA56_RS19580-1;Parent=rna-PHA56_RS19580;anticodon=(pos:complement(4125514..4125516));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS19580;product=tRNA-Lys NZ_CP116214.1 RefSeq gene 4125694 4125769 . - . ID=gene-PHA56_RS19585;Name=PHA56_RS19585;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA56_RS19585;old_locus_tag=PHA56_19585 NZ_CP116214.1 tRNAscan-SE tRNA 4125694 4125769 . - . ID=rna-PHA56_RS19585;Parent=gene-PHA56_RS19585;anticodon=(pos:complement(4125734..4125736));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS19585;product=tRNA-Lys NZ_CP116214.1 tRNAscan-SE exon 4125694 4125769 . - . ID=exon-PHA56_RS19585-1;Parent=rna-PHA56_RS19585;anticodon=(pos:complement(4125734..4125736));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS19585;product=tRNA-Lys NZ_CP116214.1 RefSeq gene 4125773 4125848 . - . ID=gene-PHA56_RS19590;Name=PHA56_RS19590;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA56_RS19590;old_locus_tag=PHA56_19590 NZ_CP116214.1 tRNAscan-SE tRNA 4125773 4125848 . - . ID=rna-PHA56_RS19590;Parent=gene-PHA56_RS19590;anticodon=(pos:complement(4125813..4125815));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS19590;product=tRNA-Val NZ_CP116214.1 tRNAscan-SE exon 4125773 4125848 . - . ID=exon-PHA56_RS19590-1;Parent=rna-PHA56_RS19590;anticodon=(pos:complement(4125813..4125815));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS19590;product=tRNA-Val NZ_CP116214.1 RefSeq gene 4125976 4126051 . - . ID=gene-PHA56_RS19595;Name=PHA56_RS19595;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA56_RS19595;old_locus_tag=PHA56_19595 NZ_CP116214.1 tRNAscan-SE tRNA 4125976 4126051 . - . ID=rna-PHA56_RS19595;Parent=gene-PHA56_RS19595;anticodon=(pos:complement(4126016..4126018));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS19595;product=tRNA-Lys NZ_CP116214.1 tRNAscan-SE exon 4125976 4126051 . - . ID=exon-PHA56_RS19595-1;Parent=rna-PHA56_RS19595;anticodon=(pos:complement(4126016..4126018));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS19595;product=tRNA-Lys NZ_CP116214.1 RefSeq gene 4126214 4127005 . - . ID=gene-PHA56_RS19600;Name=cpoB;gbkey=Gene;gene=cpoB;gene_biotype=protein_coding;locus_tag=PHA56_RS19600;old_locus_tag=PHA56_19600 NZ_CP116214.1 Protein Homology CDS 4126214 4127005 . - 0 ID=cds-WP_004848965.1;Parent=gene-PHA56_RS19600;Dbxref=Genbank:WP_004848965.1;Name=WP_004848965.1;Ontology_term=GO:0051301,GO:0070206,GO:0005515;gbkey=CDS;gene=cpoB;go_function=protein binding|0005515||IEA;go_process=cell division|0051301||IEA,protein trimerization|0070206||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225884.1;locus_tag=PHA56_RS19600;product=cell division protein CpoB;protein_id=WP_004848965.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4127015 4127539 . - . ID=gene-PHA56_RS19605;Name=pal;gbkey=Gene;gene=pal;gene_biotype=protein_coding;locus_tag=PHA56_RS19605;old_locus_tag=PHA56_19605 NZ_CP116214.1 Protein Homology CDS 4127015 4127539 . - 0 ID=cds-WP_004100337.1;Parent=gene-PHA56_RS19605;Dbxref=Genbank:WP_004100337.1;Name=WP_004100337.1;gbkey=CDS;gene=pal;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225883.1;locus_tag=PHA56_RS19605;product=peptidoglycan-associated lipoprotein Pal;protein_id=WP_004100337.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4127574 4128866 . - . ID=gene-PHA56_RS19610;Name=tolB;gbkey=Gene;gene=tolB;gene_biotype=protein_coding;locus_tag=PHA56_RS19610;old_locus_tag=PHA56_19610 NZ_CP116214.1 Protein Homology CDS 4127574 4128866 . - 0 ID=cds-WP_004133400.1;Parent=gene-PHA56_RS19610;Dbxref=Genbank:WP_004133400.1;Name=WP_004133400.1;Ontology_term=GO:0006810,GO:0005215,GO:0030288;gbkey=CDS;gene=tolB;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001646851.1;locus_tag=PHA56_RS19610;product=Tol-Pal system beta propeller repeat protein TolB;protein_id=WP_004133400.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4128995 4130320 . - . ID=gene-PHA56_RS19615;Name=tolA;gbkey=Gene;gene=tolA;gene_biotype=protein_coding;locus_tag=PHA56_RS19615;old_locus_tag=PHA56_19615 NZ_CP116214.1 Protein Homology CDS 4128995 4130320 . - 0 ID=cds-WP_038424229.1;Parent=gene-PHA56_RS19615;Dbxref=Genbank:WP_038424229.1;Name=WP_038424229.1;Ontology_term=GO:0043213,GO:0019534,GO:0016020;gbkey=CDS;gene=tolA;go_component=membrane|0016020||IEA;go_function=toxin transmembrane transporter activity|0019534||IEA;go_process=bacteriocin transport|0043213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225881.1;locus_tag=PHA56_RS19615;product=cell envelope integrity protein TolA;protein_id=WP_038424229.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4130426 4130854 . - . ID=gene-PHA56_RS19620;Name=tolR;gbkey=Gene;gene=tolR;gene_biotype=protein_coding;locus_tag=PHA56_RS19620;old_locus_tag=PHA56_19620 NZ_CP116214.1 Protein Homology CDS 4130426 4130854 . - 0 ID=cds-WP_004130580.1;Parent=gene-PHA56_RS19620;Dbxref=Genbank:WP_004130580.1;Name=WP_004130580.1;gbkey=CDS;gene=tolR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965300.1;locus_tag=PHA56_RS19620;product=colicin uptake protein TolR;protein_id=WP_004130580.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4130858 4131550 . - . ID=gene-PHA56_RS19625;Name=tolQ;gbkey=Gene;gene=tolQ;gene_biotype=protein_coding;locus_tag=PHA56_RS19625;old_locus_tag=PHA56_19625 NZ_CP116214.1 Protein Homology CDS 4130858 4131550 . - 0 ID=cds-WP_014228456.1;Parent=gene-PHA56_RS19625;Dbxref=Genbank:WP_014228456.1;Name=WP_014228456.1;gbkey=CDS;gene=tolQ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225879.1;locus_tag=PHA56_RS19625;product=Tol-Pal system protein TolQ;protein_id=WP_014228456.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4131547 4131951 . - . ID=gene-PHA56_RS19630;Name=ybgC;gbkey=Gene;gene=ybgC;gene_biotype=protein_coding;locus_tag=PHA56_RS19630;old_locus_tag=PHA56_19630 NZ_CP116214.1 Protein Homology CDS 4131547 4131951 . - 0 ID=cds-WP_004100330.1;Parent=gene-PHA56_RS19630;Dbxref=Genbank:WP_004100330.1;Name=WP_004100330.1;gbkey=CDS;gene=ybgC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308798.1;locus_tag=PHA56_RS19630;product=tol-pal system-associated acyl-CoA thioesterase;protein_id=WP_004100330.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4132101 4132385 . - . ID=gene-PHA56_RS19635;Name=ybgE;gbkey=Gene;gene=ybgE;gene_biotype=protein_coding;locus_tag=PHA56_RS19635;old_locus_tag=PHA56_19635 NZ_CP116214.1 Protein Homology CDS 4132101 4132385 . - 0 ID=cds-WP_004130577.1;Parent=gene-PHA56_RS19635;Dbxref=Genbank:WP_004130577.1;Name=WP_004130577.1;gbkey=CDS;gene=ybgE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004130577.1;locus_tag=PHA56_RS19635;product=cyd operon protein YbgE;protein_id=WP_004130577.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4132516 4132629 . - . ID=gene-PHA56_RS19640;Name=cydX;gbkey=Gene;gene=cydX;gene_biotype=protein_coding;locus_tag=PHA56_RS19640;old_locus_tag=PHA56_19640 NZ_CP116214.1 Protein Homology CDS 4132516 4132629 . - 0 ID=cds-WP_004100325.1;Parent=gene-PHA56_RS19640;Dbxref=Genbank:WP_004100325.1;Name=WP_004100325.1;Ontology_term=GO:0016682;gbkey=CDS;gene=cydX;go_function=oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008456153.1;locus_tag=PHA56_RS19640;product=cytochrome bd-I oxidase subunit CydX;protein_id=WP_004100325.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4132645 4133784 . - . ID=gene-PHA56_RS19645;Name=cydB;gbkey=Gene;gene=cydB;gene_biotype=protein_coding;locus_tag=PHA56_RS19645;old_locus_tag=PHA56_19645 NZ_CP116214.1 Protein Homology CDS 4132645 4133784 . - 0 ID=cds-WP_004848954.1;Parent=gene-PHA56_RS19645;Dbxref=Genbank:WP_004848954.1;Name=WP_004848954.1;Ontology_term=GO:0016020;gbkey=CDS;gene=cydB;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000568269.1;locus_tag=PHA56_RS19645;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_004848954.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4133800 4135368 . - . ID=gene-PHA56_RS19650;Name=cydA;gbkey=Gene;gene=cydA;gene_biotype=protein_coding;locus_tag=PHA56_RS19650;old_locus_tag=PHA56_19650 NZ_CP116214.1 Protein Homology CDS 4133800 4135368 . - 0 ID=cds-WP_271292986.1;Parent=gene-PHA56_RS19650;Dbxref=Genbank:WP_271292986.1;Name=WP_271292986.1;Ontology_term=GO:0019646,GO:0009055,GO:0070069;gbkey=CDS;gene=cydA;go_component=cytochrome complex|0070069||IEA;go_function=electron transfer activity|0009055||IEA;go_process=aerobic electron transport chain|0019646||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225874.1;locus_tag=PHA56_RS19650;product=cytochrome ubiquinol oxidase subunit I;protein_id=WP_271292986.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4136595 4137044 . + . ID=gene-PHA56_RS19655;Name=glmS;gbkey=Gene;gene=glmS;gene_biotype=protein_coding;locus_tag=PHA56_RS19655;old_locus_tag=PHA56_19655 NZ_CP116214.1 Protein Homology CDS 4136595 4137044 . + 0 ID=cds-WP_004848951.1;Parent=gene-PHA56_RS19655;Dbxref=Genbank:WP_004848951.1;Name=WP_004848951.1;Ontology_term=GO:0050097;gbkey=CDS;gene=glmS;go_function=methylaspartate mutase activity|0050097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308791.1;locus_tag=PHA56_RS19655;product=methylaspartate mutase subunit S;protein_id=WP_004848951.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4137044 4138432 . + . ID=gene-PHA56_RS19660;Name=glmL;gbkey=Gene;gene=glmL;gene_biotype=protein_coding;locus_tag=PHA56_RS19660;old_locus_tag=PHA56_19660 NZ_CP116214.1 Protein Homology CDS 4137044 4138432 . + 0 ID=cds-WP_014228454.1;Parent=gene-PHA56_RS19660;Dbxref=Genbank:WP_014228454.1;Name=WP_014228454.1;gbkey=CDS;gene=glmL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308790.1;locus_tag=PHA56_RS19660;product=methylaspartate mutase accessory protein GlmL;protein_id=WP_014228454.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4138449 4139894 . + . ID=gene-PHA56_RS19665;Name=PHA56_RS19665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS19665;old_locus_tag=PHA56_19665 NZ_CP116214.1 Protein Homology CDS 4138449 4139894 . + 0 ID=cds-WP_004848945.1;Parent=gene-PHA56_RS19665;Dbxref=Genbank:WP_004848945.1;Name=WP_004848945.1;Ontology_term=GO:0019670,GO:0050097;gbkey=CDS;go_function=methylaspartate mutase activity|0050097||IEA;go_process=anaerobic glutamate catabolic process|0019670||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308789.1;locus_tag=PHA56_RS19665;product=methylaspartate mutase subunit E;protein_id=WP_004848945.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4139894 4141135 . + . ID=gene-PHA56_RS19670;Name=PHA56_RS19670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS19670;old_locus_tag=PHA56_19670 NZ_CP116214.1 Protein Homology CDS 4139894 4141135 . + 0 ID=cds-WP_014228453.1;Parent=gene-PHA56_RS19670;Dbxref=Genbank:WP_014228453.1;Name=WP_014228453.1;Ontology_term=GO:0019670,GO:0050096;gbkey=CDS;go_function=methylaspartate ammonia-lyase activity|0050096||IEA;go_process=anaerobic glutamate catabolic process|0019670||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308788.1;locus_tag=PHA56_RS19670;product=methylaspartate ammonia-lyase;protein_id=WP_014228453.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4141139 4142509 . + . ID=gene-PHA56_RS19675;Name=PHA56_RS19675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS19675;old_locus_tag=PHA56_19675 NZ_CP116214.1 Protein Homology CDS 4141139 4142509 . + 0 ID=cds-WP_014228452.1;Parent=gene-PHA56_RS19675;Dbxref=Genbank:WP_014228452.1;Name=WP_014228452.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308787.1;locus_tag=PHA56_RS19675;product=acyclic terpene utilization AtuA family protein;protein_id=WP_014228452.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4142506 4142823 . + . ID=gene-PHA56_RS19680;Name=PHA56_RS19680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS19680;old_locus_tag=PHA56_19680 NZ_CP116214.1 Protein Homology CDS 4142506 4142823 . + 0 ID=cds-WP_119834425.1;Parent=gene-PHA56_RS19680;Dbxref=Genbank:WP_119834425.1;Name=WP_119834425.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004130562.1;locus_tag=PHA56_RS19680;product=DUF4387 domain-containing protein;protein_id=WP_119834425.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4143187 4144494 . + . ID=gene-PHA56_RS19685;Name=PHA56_RS19685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS19685;old_locus_tag=PHA56_19685 NZ_CP116214.1 Protein Homology CDS 4143187 4144494 . + 0 ID=cds-WP_014228451.1;Parent=gene-PHA56_RS19685;Dbxref=Genbank:WP_014228451.1;Name=WP_014228451.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133264.1;locus_tag=PHA56_RS19685;product=dicarboxylate/amino acid:cation symporter;protein_id=WP_014228451.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4144569 4145570 . + . ID=gene-PHA56_RS19690;Name=glsA;gbkey=Gene;gene=glsA;gene_biotype=protein_coding;locus_tag=PHA56_RS19690;old_locus_tag=PHA56_19690 NZ_CP116214.1 Protein Homology CDS 4144569 4145570 . + 0 ID=cds-WP_014228450.1;Parent=gene-PHA56_RS19690;Dbxref=Genbank:WP_014228450.1;Name=WP_014228450.1;Ontology_term=GO:0006541,GO:0004359;gbkey=CDS;gene=glsA;go_function=glutaminase activity|0004359||IEA;go_process=glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016149805.1;locus_tag=PHA56_RS19690;product=glutaminase A;protein_id=WP_014228450.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4145582 4147234 . + . ID=gene-PHA56_RS19695;Name=PHA56_RS19695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS19695;old_locus_tag=PHA56_19695 NZ_CP116214.1 Protein Homology CDS 4145582 4147234 . + 0 ID=cds-WP_119834426.1;Parent=gene-PHA56_RS19695;Dbxref=Genbank:WP_119834426.1;Name=WP_119834426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000042471.1;locus_tag=PHA56_RS19695;product=class I fumarate hydratase;protein_id=WP_119834426.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4147244 4147846 . + . ID=gene-PHA56_RS19700;Name=cobO;gbkey=Gene;gene=cobO;gene_biotype=protein_coding;locus_tag=PHA56_RS19700;old_locus_tag=PHA56_19700 NZ_CP116214.1 Protein Homology CDS 4147244 4147846 . + 0 ID=cds-WP_189087225.1;Parent=gene-PHA56_RS19700;Dbxref=Genbank:WP_189087225.1;Name=WP_189087225.1;Ontology_term=GO:0009236,GO:0008817;gbkey=CDS;gene=cobO;go_function=corrinoid adenosyltransferase activity|0008817||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004130554.1;locus_tag=PHA56_RS19700;product=cob(I)yrinic acid a%2Cc-diamide adenosyltransferase;protein_id=WP_189087225.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4148474 4149376 . - . ID=gene-PHA56_RS19705;Name=PHA56_RS19705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS19705;old_locus_tag=PHA56_19705 NZ_CP116214.1 Protein Homology CDS 4148474 4149376 . - 0 ID=cds-WP_004848928.1;Parent=gene-PHA56_RS19705;Dbxref=Genbank:WP_004848928.1;Name=WP_004848928.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004130553.1;locus_tag=PHA56_RS19705;product=LysR family transcriptional regulator;protein_id=WP_004848928.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4149772 4150542 . - . ID=gene-PHA56_RS19710;Name=PHA56_RS19710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS19710;old_locus_tag=PHA56_19710 NZ_CP116214.1 Protein Homology CDS 4149772 4150542 . - 0 ID=cds-WP_042944654.1;Parent=gene-PHA56_RS19710;Dbxref=Genbank:WP_042944654.1;Name=WP_042944654.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014837842.1;locus_tag=PHA56_RS19710;product=AraC family transcriptional regulator;protein_id=WP_042944654.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4150709 4151578 . - . ID=gene-PHA56_RS19715;Name=sucD;gbkey=Gene;gene=sucD;gene_biotype=protein_coding;locus_tag=PHA56_RS19715;old_locus_tag=PHA56_19715 NZ_CP116214.1 Protein Homology CDS 4150709 4151578 . - 0 ID=cds-WP_004100288.1;Parent=gene-PHA56_RS19715;Dbxref=Genbank:WP_004100288.1;Name=WP_004100288.1;Ontology_term=GO:0003824;gbkey=CDS;gene=sucD;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459724.1;locus_tag=PHA56_RS19715;product=succinate--CoA ligase subunit alpha;protein_id=WP_004100288.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4151578 4152744 . - . ID=gene-PHA56_RS19720;Name=sucC;gbkey=Gene;gene=sucC;gene_biotype=protein_coding;locus_tag=PHA56_RS19720;old_locus_tag=PHA56_19720 NZ_CP116214.1 Protein Homology CDS 4151578 4152744 . - 0 ID=cds-WP_119834428.1;Parent=gene-PHA56_RS19720;Dbxref=Genbank:WP_119834428.1;Name=WP_119834428.1;Ontology_term=GO:0006099,GO:0003824,GO:0005524,GO:0046872;gbkey=CDS;gene=sucC;go_function=catalytic activity|0003824||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133271.1;locus_tag=PHA56_RS19720;product=ADP-forming succinate--CoA ligase subunit beta;protein_id=WP_119834428.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4152844 4154070 . - . ID=gene-PHA56_RS19725;Name=odhB;gbkey=Gene;gene=odhB;gene_biotype=protein_coding;locus_tag=PHA56_RS19725;old_locus_tag=PHA56_19725 NZ_CP116214.1 Protein Homology CDS 4152844 4154070 . - 0 ID=cds-WP_014228443.1;Parent=gene-PHA56_RS19725;Dbxref=Genbank:WP_014228443.1;Name=WP_014228443.1;Ontology_term=GO:0006099,GO:0004149,GO:0045252;gbkey=CDS;gene=odhB;go_component=oxoglutarate dehydrogenase complex|0045252||IEA;go_function=dihydrolipoyllysine-residue succinyltransferase activity|0004149||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225870.1;locus_tag=PHA56_RS19725;product=2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase;protein_id=WP_014228443.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4154085 4156892 . - . ID=gene-PHA56_RS19730;Name=sucA;gbkey=Gene;gene=sucA;gene_biotype=protein_coding;locus_tag=PHA56_RS19730;old_locus_tag=PHA56_19730 NZ_CP116214.1 Protein Homology CDS 4154085 4156892 . - 0 ID=cds-WP_004130528.1;Parent=gene-PHA56_RS19730;Dbxref=Genbank:WP_004130528.1;Name=WP_004130528.1;Ontology_term=GO:0006099,GO:0006554,GO:0006568,GO:0004591,GO:0045252;gbkey=CDS;gene=sucA;go_component=oxoglutarate dehydrogenase complex|0045252||IEA;go_function=oxoglutarate dehydrogenase (succinyl-transferring) activity|0004591||IEA;go_process=tricarboxylic acid cycle|0006099||IEA,lysine catabolic process|0006554||IEA,tryptophan metabolic process|0006568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225869.1;locus_tag=PHA56_RS19730;product=2-oxoglutarate dehydrogenase E1 component;protein_id=WP_004130528.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4157464 4158180 . - . ID=gene-PHA56_RS19735;Name=sdhB;gbkey=Gene;gene=sdhB;gene_biotype=protein_coding;locus_tag=PHA56_RS19735;old_locus_tag=PHA56_19735 NZ_CP116214.1 Protein Homology CDS 4157464 4158180 . - 0 ID=cds-WP_004130526.1;Parent=gene-PHA56_RS19735;Dbxref=Genbank:WP_004130526.1;Name=WP_004130526.1;gbkey=CDS;gene=sdhB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133276.1;locus_tag=PHA56_RS19735;product=succinate dehydrogenase iron-sulfur subunit SdhB;protein_id=WP_004130526.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4158196 4159962 . - . ID=gene-PHA56_RS19740;Name=sdhA;gbkey=Gene;gene=sdhA;gene_biotype=protein_coding;locus_tag=PHA56_RS19740;old_locus_tag=PHA56_19740 NZ_CP116214.1 Protein Homology CDS 4158196 4159962 . - 0 ID=cds-WP_076752520.1;Parent=gene-PHA56_RS19740;Dbxref=Genbank:WP_076752520.1;Name=WP_076752520.1;Ontology_term=GO:0006099,GO:0022900,GO:0016627,GO:0050660;gbkey=CDS;gene=sdhA;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tricarboxylic acid cycle|0006099||IEA,electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122549.1;locus_tag=PHA56_RS19740;product=succinate dehydrogenase flavoprotein subunit;protein_id=WP_076752520.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4159962 4160309 . - . ID=gene-PHA56_RS19745;Name=sdhD;gbkey=Gene;gene=sdhD;gene_biotype=protein_coding;gene_synonym=cybS,dhsD;locus_tag=PHA56_RS19745;old_locus_tag=PHA56_19745 NZ_CP116214.1 Protein Homology CDS 4159962 4160309 . - 0 ID=cds-WP_004100278.1;Parent=gene-PHA56_RS19745;Dbxref=Genbank:WP_004100278.1;Name=WP_004100278.1;gbkey=CDS;gene=sdhD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017455938.1;locus_tag=PHA56_RS19745;product=succinate dehydrogenase membrane anchor subunit;protein_id=WP_004100278.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4160303 4160707 . - . ID=gene-PHA56_RS19750;Name=sdhC;gbkey=Gene;gene=sdhC;gene_biotype=protein_coding;gene_synonym=cybA,dhsC;locus_tag=PHA56_RS19750;old_locus_tag=PHA56_19750 NZ_CP116214.1 Protein Homology CDS 4160303 4160707 . - 0 ID=cds-WP_014837839.1;Parent=gene-PHA56_RS19750;Dbxref=Genbank:WP_014837839.1;Name=WP_014837839.1;Ontology_term=GO:0006099,GO:0000104,GO:0009055,GO:0016020,GO:0045281;gbkey=CDS;gene=sdhC;go_component=membrane|0016020||IEA,succinate dehydrogenase complex|0045281||IEA;go_function=succinate dehydrogenase activity|0000104||IEA,electron transfer activity|0009055||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000263334.1;locus_tag=PHA56_RS19750;product=succinate dehydrogenase cytochrome b556 subunit;protein_id=WP_014837839.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4161347 4162630 . + . ID=gene-PHA56_RS19755;Name=gltA;gbkey=Gene;gene=gltA;gene_biotype=protein_coding;locus_tag=PHA56_RS19755;old_locus_tag=PHA56_19755 NZ_CP116214.1 Protein Homology CDS 4161347 4162630 . + 0 ID=cds-WP_004100276.1;Parent=gene-PHA56_RS19755;Dbxref=Genbank:WP_004100276.1;Name=WP_004100276.1;Ontology_term=GO:0006099,GO:0004108;gbkey=CDS;gene=gltA;go_function=citrate (Si)-synthase activity|0004108||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415248.1;locus_tag=PHA56_RS19755;product=citrate synthase;protein_id=WP_004100276.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4162676 4163467 . - . ID=gene-PHA56_RS19760;Name=nei;gbkey=Gene;gene=nei;gene_biotype=protein_coding;locus_tag=PHA56_RS19760;old_locus_tag=PHA56_19760 NZ_CP116214.1 Protein Homology CDS 4162676 4163467 . - 0 ID=cds-WP_014837838.1;Parent=gene-PHA56_RS19760;Dbxref=Genbank:WP_014837838.1;Name=WP_014837838.1;Ontology_term=GO:0006281,GO:0000703,GO:0003677,GO:0008270,GO:0140078;gbkey=CDS;gene=nei;go_function=oxidized pyrimidine nucleobase lesion DNA N-glycosylase activity|0000703||IEA,DNA binding|0003677||IEA,zinc ion binding|0008270||IEA,class I DNA-(apurinic or apyrimidinic site) endonuclease activity|0140078||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004100275.1;locus_tag=PHA56_RS19760;product=endonuclease VIII;protein_id=WP_014837838.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4163483 4164127 . - . ID=gene-PHA56_RS19765;Name=pcp;gbkey=Gene;gene=pcp;gene_biotype=protein_coding;locus_tag=PHA56_RS19765;old_locus_tag=PHA56_19765 NZ_CP116214.1 Protein Homology CDS 4163483 4164127 . - 0 ID=cds-WP_014228439.1;Parent=gene-PHA56_RS19765;Dbxref=Genbank:WP_014228439.1;Name=WP_014228439.1;Ontology_term=GO:0030163;gbkey=CDS;gene=pcp;go_process=protein catabolic process|0030163||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225860.1;locus_tag=PHA56_RS19765;product=pyroglutamyl-peptidase I;protein_id=WP_014228439.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4164137 4165132 . - . ID=gene-PHA56_RS19770;Name=PHA56_RS19770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS19770;old_locus_tag=PHA56_19770 NZ_CP116214.1 Protein Homology CDS 4164137 4165132 . - 0 ID=cds-WP_076752519.1;Parent=gene-PHA56_RS19770;Dbxref=Genbank:WP_076752519.1;Name=WP_076752519.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225859.1;locus_tag=PHA56_RS19770;product=DUF979 domain-containing protein;protein_id=WP_076752519.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4165129 4165854 . - . ID=gene-PHA56_RS19775;Name=PHA56_RS19775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS19775;old_locus_tag=PHA56_19775 NZ_CP116214.1 Protein Homology CDS 4165129 4165854 . - 0 ID=cds-WP_014228437.1;Parent=gene-PHA56_RS19775;Dbxref=Genbank:WP_014228437.1;Name=WP_014228437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225858.1;locus_tag=PHA56_RS19775;product=DUF969 domain-containing protein;protein_id=WP_014228437.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4165917 4166663 . - . ID=gene-PHA56_RS19780;Name=pxpA;gbkey=Gene;gene=pxpA;gene_biotype=protein_coding;locus_tag=PHA56_RS19780;old_locus_tag=PHA56_19780 NZ_CP116214.1 Protein Homology CDS 4165917 4166663 . - 0 ID=cds-WP_032694305.1;Parent=gene-PHA56_RS19780;Dbxref=Genbank:WP_032694305.1;Name=WP_032694305.1;Ontology_term=GO:0005975,GO:0003824;gbkey=CDS;gene=pxpA;go_function=catalytic activity|0003824||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004130514.1;locus_tag=PHA56_RS19780;product=5-oxoprolinase subunit PxpA;protein_id=WP_032694305.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4166653 4167585 . - . ID=gene-PHA56_RS19785;Name=PHA56_RS19785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS19785;old_locus_tag=PHA56_19785 NZ_CP116214.1 Protein Homology CDS 4166653 4167585 . - 0 ID=cds-WP_009651642.1;Parent=gene-PHA56_RS19785;Dbxref=Genbank:WP_009651642.1;Name=WP_009651642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225856.1;locus_tag=PHA56_RS19785;product=biotin-dependent carboxyltransferase family protein;protein_id=WP_009651642.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4167579 4168235 . - . ID=gene-PHA56_RS19790;Name=pxpB;gbkey=Gene;gene=pxpB;gene_biotype=protein_coding;locus_tag=PHA56_RS19790;old_locus_tag=PHA56_19790 NZ_CP116214.1 Protein Homology CDS 4167579 4168235 . - 0 ID=cds-WP_004848901.1;Parent=gene-PHA56_RS19790;Dbxref=Genbank:WP_004848901.1;Name=WP_004848901.1;gbkey=CDS;gene=pxpB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225855.1;locus_tag=PHA56_RS19790;product=5-oxoprolinase subunit PxpB;protein_id=WP_004848901.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4168251 4168994 . - . ID=gene-PHA56_RS19795;Name=PHA56_RS19795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS19795;old_locus_tag=PHA56_19795 NZ_CP116214.1 Protein Homology CDS 4168251 4168994 . - 0 ID=cds-WP_014228436.1;Parent=gene-PHA56_RS19795;Dbxref=Genbank:WP_014228436.1;Name=WP_014228436.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000798886.1;locus_tag=PHA56_RS19795;product=type 2 GTP cyclohydrolase I;protein_id=WP_014228436.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4169265 4170746 . + . ID=gene-PHA56_RS19800;Name=dtpD;gbkey=Gene;gene=dtpD;gene_biotype=protein_coding;locus_tag=PHA56_RS19800;old_locus_tag=PHA56_19800 NZ_CP116214.1 Protein Homology CDS 4169265 4170746 . + 0 ID=cds-WP_032694307.1;Parent=gene-PHA56_RS19800;Dbxref=Genbank:WP_032694307.1;Name=WP_032694307.1;Ontology_term=GO:0006857,GO:0055085,GO:1904680,GO:0016020;gbkey=CDS;gene=dtpD;go_component=membrane|0016020||IEA;go_function=peptide transmembrane transporter activity|1904680||IEA;go_process=oligopeptide transport|0006857||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459695.1;locus_tag=PHA56_RS19800;product=dipeptide permease DtpD;protein_id=WP_032694307.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4170709 4172157 . - . ID=gene-PHA56_RS19805;Name=phrB;gbkey=Gene;gene=phrB;gene_biotype=protein_coding;locus_tag=PHA56_RS19805;old_locus_tag=PHA56_19805 NZ_CP116214.1 Protein Homology CDS 4170709 4172157 . - 0 ID=cds-WP_076752518.1;Parent=gene-PHA56_RS19805;Dbxref=Genbank:WP_076752518.1;Name=WP_076752518.1;gbkey=CDS;gene=phrB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225852.1;locus_tag=PHA56_RS19805;product=deoxyribodipyrimidine photo-lyase;protein_id=WP_076752518.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4172402 4172608 . - . ID=gene-PHA56_RS19810;Name=PHA56_RS19810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS19810;old_locus_tag=PHA56_19810 NZ_CP116214.1 Protein Homology CDS 4172402 4172608 . - 0 ID=cds-WP_004848892.1;Parent=gene-PHA56_RS19810;Dbxref=Genbank:WP_004848892.1;Name=WP_004848892.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459693.1;locus_tag=PHA56_RS19810;product=DUF2517 family protein;protein_id=WP_004848892.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4172918 4173007 . + . ID=gene-PHA56_RS19815;Name=kdpF;gbkey=Gene;gene=kdpF;gene_biotype=protein_coding;locus_tag=PHA56_RS19815;old_locus_tag=PHA56_19815 NZ_CP116214.1 Protein Homology CDS 4172918 4173007 . + 0 ID=cds-WP_009651669.1;Parent=gene-PHA56_RS19815;Dbxref=Genbank:WP_009651669.1;Name=WP_009651669.1;gbkey=CDS;gene=kdpF;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588443.1;locus_tag=PHA56_RS19815;product=K(+)-transporting ATPase subunit F;protein_id=WP_009651669.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4173007 4174686 . + . ID=gene-PHA56_RS19820;Name=kdpA;gbkey=Gene;gene=kdpA;gene_biotype=protein_coding;locus_tag=PHA56_RS19820;old_locus_tag=PHA56_19820 NZ_CP116214.1 Protein Homology CDS 4173007 4174686 . + 0 ID=cds-WP_014837834.1;Parent=gene-PHA56_RS19820;Dbxref=Genbank:WP_014837834.1;Name=WP_014837834.1;Ontology_term=GO:0006813,GO:0008556,GO:0031004;gbkey=CDS;gene=kdpA;go_component=potassium ion-transporting ATPase complex|0031004||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225850.1;locus_tag=PHA56_RS19820;product=potassium-transporting ATPase subunit KdpA;protein_id=WP_014837834.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4174708 4176756 . + . ID=gene-PHA56_RS19825;Name=kdpB;gbkey=Gene;gene=kdpB;gene_biotype=protein_coding;locus_tag=PHA56_RS19825;old_locus_tag=PHA56_19825 NZ_CP116214.1 Protein Homology CDS 4174708 4176756 . + 0 ID=cds-WP_004848888.1;Parent=gene-PHA56_RS19825;Dbxref=Genbank:WP_004848888.1;Name=WP_004848888.1;Ontology_term=GO:0006813,GO:0008556,GO:0031004;gbkey=CDS;gene=kdpB;go_component=potassium ion-transporting ATPase complex|0031004||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225849.1;locus_tag=PHA56_RS19825;product=potassium-transporting ATPase subunit KdpB;protein_id=WP_004848888.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4176767 4177342 . + . ID=gene-PHA56_RS19830;Name=kdpC;gbkey=Gene;gene=kdpC;gene_biotype=protein_coding;locus_tag=PHA56_RS19830;old_locus_tag=PHA56_19830 NZ_CP116214.1 Protein Homology CDS 4176767 4177342 . + 0 ID=cds-WP_004848885.1;Parent=gene-PHA56_RS19830;Dbxref=Genbank:WP_004848885.1;Name=WP_004848885.1;Ontology_term=GO:0006813,GO:0008556,GO:0016020;gbkey=CDS;gene=kdpC;go_component=membrane|0016020||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225848.1;locus_tag=PHA56_RS19830;product=potassium-transporting ATPase subunit KdpC;protein_id=WP_004848885.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4177345 4180032 . + . ID=gene-PHA56_RS19835;Name=kdpD;gbkey=Gene;gene=kdpD;gene_biotype=protein_coding;locus_tag=PHA56_RS19835;old_locus_tag=PHA56_19835 NZ_CP116214.1 Protein Homology CDS 4177345 4180032 . + 0 ID=cds-WP_014228431.1;Parent=gene-PHA56_RS19835;Dbxref=Genbank:WP_014228431.1;Name=WP_014228431.1;Ontology_term=GO:0000160,GO:0000155;gbkey=CDS;gene=kdpD;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225847.1;locus_tag=PHA56_RS19835;product=two-component system sensor histidine kinase KdpD;protein_id=WP_014228431.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4180029 4180706 . + . ID=gene-PHA56_RS19840;Name=kdpE;gbkey=Gene;gene=kdpE;gene_biotype=protein_coding;locus_tag=PHA56_RS19840;old_locus_tag=PHA56_19840 NZ_CP116214.1 Protein Homology CDS 4180029 4180706 . + 0 ID=cds-WP_014837830.1;Parent=gene-PHA56_RS19840;Dbxref=Genbank:WP_014837830.1;Name=WP_014837830.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=kdpE;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225846.1;locus_tag=PHA56_RS19840;product=two-component system response regulator KdpE;protein_id=WP_014837830.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4180940 4181635 . - . ID=gene-PHA56_RS19845;Name=araD;gbkey=Gene;gene=araD;gene_biotype=protein_coding;locus_tag=PHA56_RS19845;old_locus_tag=PHA56_19845 NZ_CP116214.1 Protein Homology CDS 4180940 4181635 . - 0 ID=cds-WP_014228429.1;Parent=gene-PHA56_RS19845;Dbxref=Genbank:WP_014228429.1;Name=WP_014228429.1;Ontology_term=GO:0019568,GO:0008742;gbkey=CDS;gene=araD;go_function=L-ribulose-phosphate 4-epimerase activity|0008742||IEA;go_process=arabinose catabolic process|0019568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019080384.1;locus_tag=PHA56_RS19845;product=L-ribulose-5-phosphate 4-epimerase;protein_id=WP_014228429.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4181625 4182524 . - . ID=gene-PHA56_RS19850;Name=PHA56_RS19850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS19850;old_locus_tag=PHA56_19850 NZ_CP116214.1 Protein Homology CDS 4181625 4182524 . - 0 ID=cds-WP_032694312.1;Parent=gene-PHA56_RS19850;Dbxref=Genbank:WP_032694312.1;Name=WP_032694312.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009651662.1;locus_tag=PHA56_RS19850;product=L-ribulose-5-phosphate 3-epimerase;protein_id=WP_032694312.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4182521 4183999 . - . ID=gene-PHA56_RS19855;Name=PHA56_RS19855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS19855;old_locus_tag=PHA56_19855 NZ_CP116214.1 Protein Homology CDS 4182521 4183999 . - 0 ID=cds-WP_076752516.1;Parent=gene-PHA56_RS19855;Dbxref=Genbank:WP_076752516.1;Name=WP_076752516.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017146340.1;locus_tag=PHA56_RS19855;product=carbohydrate kinase;protein_id=WP_076752516.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4184027 4184956 . - . ID=gene-PHA56_RS19860;Name=PHA56_RS19860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS19860;old_locus_tag=PHA56_19860 NZ_CP116214.1 Protein Homology CDS 4184027 4184956 . - 0 ID=cds-WP_046878552.1;Parent=gene-PHA56_RS19860;Dbxref=Genbank:WP_046878552.1;Name=WP_046878552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014837828.1;locus_tag=PHA56_RS19860;product=ABC transporter permease;protein_id=WP_046878552.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4185024 4186508 . - . ID=gene-PHA56_RS19865;Name=PHA56_RS19865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS19865;old_locus_tag=PHA56_19865 NZ_CP116214.1 Protein Homology CDS 4185024 4186508 . - 0 ID=cds-WP_032694353.1;Parent=gene-PHA56_RS19865;Dbxref=Genbank:WP_032694353.1;Name=WP_032694353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192642.1;locus_tag=PHA56_RS19865;product=sugar ABC transporter ATP-binding protein;protein_id=WP_032694353.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4186614 4187480 . - . ID=gene-PHA56_RS19870;Name=PHA56_RS19870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS19870;old_locus_tag=PHA56_19870 NZ_CP116214.1 Protein Homology CDS 4186614 4187480 . - 0 ID=cds-WP_014228426.1;Parent=gene-PHA56_RS19870;Dbxref=Genbank:WP_014228426.1;Name=WP_014228426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014228426.1;locus_tag=PHA56_RS19870;product=ABC transporter substrate-binding protein;protein_id=WP_014228426.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4187761 4188834 . - . ID=gene-PHA56_RS19875;Name=PHA56_RS19875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS19875;old_locus_tag=PHA56_19875 NZ_CP116214.1 Protein Homology CDS 4187761 4188834 . - 0 ID=cds-WP_004848867.1;Parent=gene-PHA56_RS19875;Dbxref=Genbank:WP_004848867.1;Name=WP_004848867.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004955566.1;locus_tag=PHA56_RS19875;product=erythritol/L-threitol dehydrogenase;protein_id=WP_004848867.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4188951 4189748 . - . ID=gene-PHA56_RS19880;Name=PHA56_RS19880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS19880;old_locus_tag=PHA56_19880 NZ_CP116214.1 Protein Homology CDS 4188951 4189748 . - 0 ID=cds-WP_004848865.1;Parent=gene-PHA56_RS19880;Dbxref=Genbank:WP_004848865.1;Name=WP_004848865.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017146343.1;locus_tag=PHA56_RS19880;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_004848865.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4190071 4190490 . - . ID=gene-PHA56_RS19885;Name=PHA56_RS19885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS19885;old_locus_tag=PHA56_19885 NZ_CP116214.1 Protein Homology CDS 4190071 4190490 . - 0 ID=cds-WP_014228423.1;Parent=gene-PHA56_RS19885;Dbxref=Genbank:WP_014228423.1;Name=WP_014228423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004130490.1;locus_tag=PHA56_RS19885;product=hypothetical protein;protein_id=WP_014228423.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4190547 4192187 . - . ID=gene-PHA56_RS19890;Name=pgm;gbkey=Gene;gene=pgm;gene_biotype=protein_coding;locus_tag=PHA56_RS19890;old_locus_tag=PHA56_19890 NZ_CP116214.1 Protein Homology CDS 4190547 4192187 . - 0 ID=cds-WP_014228422.1;Parent=gene-PHA56_RS19890;Dbxref=Genbank:WP_014228422.1;Name=WP_014228422.1;Ontology_term=GO:0005975,GO:0004614;gbkey=CDS;gene=pgm;go_function=phosphoglucomutase activity|0004614||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225844.1;locus_tag=PHA56_RS19890;product=phosphoglucomutase (alpha-D-glucose-1%2C6-bisphosphate-dependent);protein_id=WP_014228422.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4192219 4192767 . - . ID=gene-PHA56_RS19895;Name=seqA;gbkey=Gene;gene=seqA;gene_biotype=protein_coding;locus_tag=PHA56_RS19895;old_locus_tag=PHA56_19895 NZ_CP116214.1 Protein Homology CDS 4192219 4192767 . - 0 ID=cds-WP_014837822.1;Parent=gene-PHA56_RS19895;Dbxref=Genbank:WP_014837822.1;Name=WP_014837822.1;Ontology_term=GO:0032297,GO:0003677;gbkey=CDS;gene=seqA;go_function=DNA binding|0003677||IEA;go_process=negative regulation of DNA-templated DNA replication initiation|0032297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225843.1;locus_tag=PHA56_RS19895;product=replication initiation negative regulator SeqA;protein_id=WP_014837822.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4192952 4193725 . + . ID=gene-PHA56_RS19900;Name=ybfF;gbkey=Gene;gene=ybfF;gene_biotype=protein_coding;locus_tag=PHA56_RS19900;old_locus_tag=PHA56_19900 NZ_CP116214.1 Protein Homology CDS 4192952 4193725 . + 0 ID=cds-WP_038424219.1;Parent=gene-PHA56_RS19900;Dbxref=Genbank:WP_038424219.1;Name=WP_038424219.1;gbkey=CDS;gene=ybfF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004223669.1;locus_tag=PHA56_RS19900;product=esterase;protein_id=WP_038424219.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4193859 4194152 . + . ID=gene-PHA56_RS19905;Name=ybfE;gbkey=Gene;gene=ybfE;gene_biotype=protein_coding;locus_tag=PHA56_RS19905;old_locus_tag=PHA56_19905 NZ_CP116214.1 Protein Homology CDS 4193859 4194152 . + 0 ID=cds-WP_004848855.1;Parent=gene-PHA56_RS19905;Dbxref=Genbank:WP_004848855.1;Name=WP_004848855.1;gbkey=CDS;gene=ybfE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004100235.1;locus_tag=PHA56_RS19905;product=LexA regulated protein;protein_id=WP_004848855.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4194302 4194832 . + . ID=gene-PHA56_RS19910;Name=fldA;gbkey=Gene;gene=fldA;gene_biotype=protein_coding;locus_tag=PHA56_RS19910;old_locus_tag=PHA56_19910 NZ_CP116214.1 Protein Homology CDS 4194302 4194832 . + 0 ID=cds-WP_004100234.1;Parent=gene-PHA56_RS19910;Dbxref=Genbank:WP_004100234.1;Name=WP_004100234.1;gbkey=CDS;gene=fldA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225839.1;locus_tag=PHA56_RS19910;product=flavodoxin FldA;protein_id=WP_004100234.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4195124 4195576 . + . ID=gene-PHA56_RS19915;Name=fur;gbkey=Gene;gene=fur;gene_biotype=protein_coding;locus_tag=PHA56_RS19915;old_locus_tag=PHA56_19915 NZ_CP116214.1 Protein Homology CDS 4195124 4195576 . + 0 ID=cds-WP_004130476.1;Parent=gene-PHA56_RS19915;Dbxref=Genbank:WP_004130476.1;Name=WP_004130476.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=fur;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459678.1;locus_tag=PHA56_RS19915;product=ferric iron uptake transcriptional regulator;protein_id=WP_004130476.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4195706 4196632 . + . ID=gene-PHA56_RS19920;Name=tcuR;gbkey=Gene;gene=tcuR;gene_biotype=protein_coding;locus_tag=PHA56_RS19920;old_locus_tag=PHA56_19920 NZ_CP116214.1 Protein Homology CDS 4195706 4196632 . + 0 ID=cds-WP_032694319.1;Parent=gene-PHA56_RS19920;Dbxref=Genbank:WP_032694319.1;Name=WP_032694319.1;gbkey=CDS;gene=tcuR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004134132.1;locus_tag=PHA56_RS19920;product=tricarballylate utilization LysR family transcriptional regulator TcuR;protein_id=WP_032694319.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4196730 4198133 . + . ID=gene-PHA56_RS19925;Name=tcuA;gbkey=Gene;gene=tcuA;gene_biotype=protein_coding;locus_tag=PHA56_RS19925;old_locus_tag=PHA56_19925 NZ_CP116214.1 Protein Homology CDS 4196730 4198133 . + 0 ID=cds-WP_032718717.1;Parent=gene-PHA56_RS19925;Dbxref=Genbank:WP_032718717.1;Name=WP_032718717.1;gbkey=CDS;gene=tcuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459676.1;locus_tag=PHA56_RS19925;product=FAD-dependent tricarballylate dehydrogenase TcuA;protein_id=WP_032718717.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4198120 4199259 . + . ID=gene-PHA56_RS19930;Name=tcuB;gbkey=Gene;gene=tcuB;gene_biotype=protein_coding;locus_tag=PHA56_RS19930;old_locus_tag=PHA56_19930 NZ_CP116214.1 Protein Homology CDS 4198120 4199259 . + 0 ID=cds-WP_014228417.1;Parent=gene-PHA56_RS19930;Dbxref=Genbank:WP_014228417.1;Name=WP_014228417.1;gbkey=CDS;gene=tcuB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017901424.1;locus_tag=PHA56_RS19930;product=tricarballylate utilization 4Fe-4S protein TcuB;protein_id=WP_014228417.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4199314 4200609 . + . ID=gene-PHA56_RS19935;Name=PHA56_RS19935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS19935;old_locus_tag=PHA56_19935 NZ_CP116214.1 Protein Homology CDS 4199314 4200609 . + 0 ID=cds-WP_014228416.1;Parent=gene-PHA56_RS19935;Dbxref=Genbank:WP_014228416.1;Name=WP_014228416.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004848845.1;locus_tag=PHA56_RS19935;product=MFS transporter;protein_id=WP_014228416.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4200662 4200994 . - . ID=gene-PHA56_RS19940;Name=chiQ;gbkey=Gene;gene=chiQ;gene_biotype=protein_coding;locus_tag=PHA56_RS19940;old_locus_tag=PHA56_19940 NZ_CP116214.1 Protein Homology CDS 4200662 4200994 . - 0 ID=cds-WP_004848843.1;Parent=gene-PHA56_RS19940;Dbxref=Genbank:WP_004848843.1;Name=WP_004848843.1;gbkey=CDS;gene=chiQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004848843.1;locus_tag=PHA56_RS19940;product=ChiQ/YbfN family lipoprotein;protein_id=WP_004848843.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4201041 4202444 . - . ID=gene-PHA56_RS19945;Name=chiP;gbkey=Gene;gene=chiP;gene_biotype=protein_coding;locus_tag=PHA56_RS19945;old_locus_tag=PHA56_19945 NZ_CP116214.1 Protein Homology CDS 4201041 4202444 . - 0 ID=cds-WP_004130464.1;Parent=gene-PHA56_RS19945;Dbxref=Genbank:WP_004130464.1;Name=WP_004130464.1;gbkey=CDS;gene=chiP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225836.1;locus_tag=PHA56_RS19945;product=chitoporin;protein_id=WP_004130464.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4202883 4204550 . - . ID=gene-PHA56_RS19950;Name=glnS;gbkey=Gene;gene=glnS;gene_biotype=protein_coding;locus_tag=PHA56_RS19950;old_locus_tag=PHA56_19950 NZ_CP116214.1 Protein Homology CDS 4202883 4204550 . - 0 ID=cds-WP_014228415.1;Parent=gene-PHA56_RS19950;Dbxref=Genbank:WP_014228415.1;Name=WP_014228415.1;Ontology_term=GO:0006425,GO:0004819,GO:0005737;gbkey=CDS;gene=glnS;go_component=cytoplasm|0005737||IEA;go_function=glutamine-tRNA ligase activity|0004819||IEA;go_process=glutaminyl-tRNA aminoacylation|0006425||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004134144.1;locus_tag=PHA56_RS19950;product=glutamine--tRNA ligase;protein_id=WP_014228415.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4204729 4206681 . - . ID=gene-PHA56_RS19955;Name=nagE;gbkey=Gene;gene=nagE;gene_biotype=protein_coding;locus_tag=PHA56_RS19955;old_locus_tag=PHA56_19955 NZ_CP116214.1 Protein Homology CDS 4204729 4206681 . - 0 ID=cds-WP_014228414.1;Parent=gene-PHA56_RS19955;Dbxref=Genbank:WP_014228414.1;Name=WP_014228414.1;Ontology_term=GO:0009401,GO:0008982,GO:0015572,GO:0016020;gbkey=CDS;gene=nagE;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,N-acetylglucosamine transmembrane transporter activity|0015572||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225833.1;locus_tag=PHA56_RS19955;product=PTS N-acetyl glucosamine transporter subunit IIABC;protein_id=WP_014228414.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4206994 4207794 . + . ID=gene-PHA56_RS19960;Name=nagB;gbkey=Gene;gene=nagB;gene_biotype=protein_coding;locus_tag=PHA56_RS19960;old_locus_tag=PHA56_19960 NZ_CP116214.1 Protein Homology CDS 4206994 4207794 . + 0 ID=cds-WP_004130458.1;Parent=gene-PHA56_RS19960;Dbxref=Genbank:WP_004130458.1;Name=WP_004130458.1;Ontology_term=GO:0006044,GO:0004342;gbkey=CDS;gene=nagB;go_function=glucosamine-6-phosphate deaminase activity|0004342||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008805656.1;locus_tag=PHA56_RS19960;product=glucosamine-6-phosphate deaminase;protein_id=WP_004130458.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4207855 4209003 . + . ID=gene-PHA56_RS19965;Name=nagA;gbkey=Gene;gene=nagA;gene_biotype=protein_coding;locus_tag=PHA56_RS19965;old_locus_tag=PHA56_19965 NZ_CP116214.1 Protein Homology CDS 4207855 4209003 . + 0 ID=cds-WP_014228413.1;Parent=gene-PHA56_RS19965;Dbxref=Genbank:WP_014228413.1;Name=WP_014228413.1;Ontology_term=GO:0006044,GO:0008448;gbkey=CDS;gene=nagA;go_function=N-acetylglucosamine-6-phosphate deacetylase activity|0008448||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225831.1;locus_tag=PHA56_RS19965;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=WP_014228413.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4209012 4210232 . + . ID=gene-PHA56_RS19970;Name=PHA56_RS19970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS19970;old_locus_tag=PHA56_19970 NZ_CP116214.1 Protein Homology CDS 4209012 4210232 . + 0 ID=cds-WP_014228412.1;Parent=gene-PHA56_RS19970;Dbxref=Genbank:WP_014228412.1;Name=WP_014228412.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225830.1;locus_tag=PHA56_RS19970;product=ROK family transcriptional regulator;protein_id=WP_014228412.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4210278 4211030 . + . ID=gene-PHA56_RS19975;Name=PHA56_RS19975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS19975;old_locus_tag=PHA56_19975 NZ_CP116214.1 Protein Homology CDS 4210278 4211030 . + 0 ID=cds-WP_024358802.1;Parent=gene-PHA56_RS19975;Dbxref=Genbank:WP_024358802.1;Name=WP_024358802.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225829.1;locus_tag=PHA56_RS19975;product=HAD-IIA family hydrolase;protein_id=WP_024358802.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4211309 4212970 . + . ID=gene-PHA56_RS19980;Name=asnB;gbkey=Gene;gene=asnB;gene_biotype=protein_coding;locus_tag=PHA56_RS19980;old_locus_tag=PHA56_19980 NZ_CP116214.1 Protein Homology CDS 4211309 4212970 . + 0 ID=cds-WP_014228410.1;Parent=gene-PHA56_RS19980;Dbxref=Genbank:WP_014228410.1;Name=WP_014228410.1;Ontology_term=GO:0006529,GO:0004066;gbkey=CDS;gene=asnB;go_function=asparagine synthase (glutamine-hydrolyzing) activity|0004066||IEA;go_process=asparagine biosynthetic process|0006529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016809296.1;locus_tag=PHA56_RS19980;product=asparagine synthase B;protein_id=WP_014228410.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4213200 4213276 . + . ID=gene-PHA56_RS19985;Name=PHA56_RS19985;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA56_RS19985;old_locus_tag=PHA56_19985 NZ_CP116214.1 tRNAscan-SE tRNA 4213200 4213276 . + . ID=rna-PHA56_RS19985;Parent=gene-PHA56_RS19985;anticodon=(pos:4213234..4213236);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS19985;product=tRNA-Met NZ_CP116214.1 tRNAscan-SE exon 4213200 4213276 . + . ID=exon-PHA56_RS19985-1;Parent=rna-PHA56_RS19985;anticodon=(pos:4213234..4213236);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS19985;product=tRNA-Met NZ_CP116214.1 RefSeq gene 4213285 4213369 . + . ID=gene-PHA56_RS19990;Name=PHA56_RS19990;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA56_RS19990;old_locus_tag=PHA56_19990 NZ_CP116214.1 tRNAscan-SE tRNA 4213285 4213369 . + . ID=rna-PHA56_RS19990;Parent=gene-PHA56_RS19990;anticodon=(pos:4213319..4213321);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS19990;product=tRNA-Leu NZ_CP116214.1 tRNAscan-SE exon 4213285 4213369 . + . ID=exon-PHA56_RS19990-1;Parent=rna-PHA56_RS19990;anticodon=(pos:4213319..4213321);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS19990;product=tRNA-Leu NZ_CP116214.1 RefSeq gene 4213404 4213478 . + . ID=gene-PHA56_RS19995;Name=PHA56_RS19995;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA56_RS19995;old_locus_tag=PHA56_19995 NZ_CP116214.1 tRNAscan-SE tRNA 4213404 4213478 . + . ID=rna-PHA56_RS19995;Parent=gene-PHA56_RS19995;anticodon=(pos:4213436..4213438);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS19995;product=tRNA-Gln NZ_CP116214.1 tRNAscan-SE exon 4213404 4213478 . + . ID=exon-PHA56_RS19995-1;Parent=rna-PHA56_RS19995;anticodon=(pos:4213436..4213438);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS19995;product=tRNA-Gln NZ_CP116214.1 RefSeq gene 4213513 4213587 . + . ID=gene-PHA56_RS20000;Name=PHA56_RS20000;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA56_RS20000;old_locus_tag=PHA56_20000 NZ_CP116214.1 tRNAscan-SE tRNA 4213513 4213587 . + . ID=rna-PHA56_RS20000;Parent=gene-PHA56_RS20000;anticodon=(pos:4213545..4213547);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS20000;product=tRNA-Gln NZ_CP116214.1 tRNAscan-SE exon 4213513 4213587 . + . ID=exon-PHA56_RS20000-1;Parent=rna-PHA56_RS20000;anticodon=(pos:4213545..4213547);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS20000;product=tRNA-Gln NZ_CP116214.1 RefSeq gene 4213609 4213685 . + . ID=gene-PHA56_RS20005;Name=PHA56_RS20005;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA56_RS20005;old_locus_tag=PHA56_20005 NZ_CP116214.1 tRNAscan-SE tRNA 4213609 4213685 . + . ID=rna-PHA56_RS20005;Parent=gene-PHA56_RS20005;anticodon=(pos:4213643..4213645);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS20005;product=tRNA-Met NZ_CP116214.1 tRNAscan-SE exon 4213609 4213685 . + . ID=exon-PHA56_RS20005-1;Parent=rna-PHA56_RS20005;anticodon=(pos:4213643..4213645);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS20005;product=tRNA-Met NZ_CP116214.1 RefSeq gene 4213731 4213805 . + . ID=gene-PHA56_RS20010;Name=PHA56_RS20010;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA56_RS20010;old_locus_tag=PHA56_20010 NZ_CP116214.1 tRNAscan-SE tRNA 4213731 4213805 . + . ID=rna-PHA56_RS20010;Parent=gene-PHA56_RS20010;anticodon=(pos:4213763..4213765);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS20010;product=tRNA-Gln NZ_CP116214.1 tRNAscan-SE exon 4213731 4213805 . + . ID=exon-PHA56_RS20010-1;Parent=rna-PHA56_RS20010;anticodon=(pos:4213763..4213765);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS20010;product=tRNA-Gln NZ_CP116214.1 RefSeq gene 4213903 4213977 . + . ID=gene-PHA56_RS20015;Name=PHA56_RS20015;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA56_RS20015;old_locus_tag=PHA56_20015 NZ_CP116214.1 tRNAscan-SE tRNA 4213903 4213977 . + . ID=rna-PHA56_RS20015;Parent=gene-PHA56_RS20015;anticodon=(pos:4213935..4213937);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS20015;product=tRNA-Gln NZ_CP116214.1 tRNAscan-SE exon 4213903 4213977 . + . ID=exon-PHA56_RS20015-1;Parent=rna-PHA56_RS20015;anticodon=(pos:4213935..4213937);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS20015;product=tRNA-Gln NZ_CP116214.1 RefSeq gene 4214085 4215260 . - . ID=gene-PHA56_RS20020;Name=ubiF;gbkey=Gene;gene=ubiF;gene_biotype=protein_coding;locus_tag=PHA56_RS20020;old_locus_tag=PHA56_20020 NZ_CP116214.1 Protein Homology CDS 4214085 4215260 . - 0 ID=cds-WP_032718719.1;Parent=gene-PHA56_RS20020;Dbxref=Genbank:WP_032718719.1;Name=WP_032718719.1;Ontology_term=GO:0006744,GO:0016709;gbkey=CDS;gene=ubiF;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225827.1;locus_tag=PHA56_RS20020;product=3-demethoxyubiquinol 3-hydroxylase;protein_id=WP_032718719.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4215469 4216893 . + . ID=gene-PHA56_RS20025;Name=miaB;gbkey=Gene;gene=miaB;gene_biotype=protein_coding;locus_tag=PHA56_RS20025;old_locus_tag=PHA56_20025 NZ_CP116214.1 Protein Homology CDS 4215469 4216893 . + 0 ID=cds-WP_004111391.1;Parent=gene-PHA56_RS20025;Dbxref=Genbank:WP_004111391.1;Name=WP_004111391.1;Ontology_term=GO:0006400,GO:0016782,GO:0051539,GO:1904047;gbkey=CDS;gene=miaB;go_function=transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308726.1;locus_tag=PHA56_RS20025;product=tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB;protein_id=WP_004111391.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4217038 4218084 . + . ID=gene-PHA56_RS20030;Name=PHA56_RS20030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS20030;old_locus_tag=PHA56_20030 NZ_CP116214.1 Protein Homology CDS 4217038 4218084 . + 0 ID=cds-WP_004134159.1;Parent=gene-PHA56_RS20030;Dbxref=Genbank:WP_004134159.1;Name=WP_004134159.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225825.1;locus_tag=PHA56_RS20030;product=PhoH family protein;protein_id=WP_004134159.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4218081 4218548 . + . ID=gene-PHA56_RS20035;Name=ybeY;gbkey=Gene;gene=ybeY;gene_biotype=protein_coding;locus_tag=PHA56_RS20035;old_locus_tag=PHA56_20035 NZ_CP116214.1 Protein Homology CDS 4218081 4218548 . + 0 ID=cds-WP_004130446.1;Parent=gene-PHA56_RS20035;Dbxref=Genbank:WP_004130446.1;Name=WP_004130446.1;Ontology_term=GO:0042254,GO:0004540,GO:0046872;gbkey=CDS;gene=ybeY;go_function=ribonuclease activity|0004540||IEA,metal ion binding|0046872||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014169133.1;locus_tag=PHA56_RS20035;product=rRNA maturation RNase YbeY;protein_id=WP_004130446.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4218647 4219525 . + . ID=gene-PHA56_RS20040;Name=corC;gbkey=Gene;gene=corC;gene_biotype=protein_coding;locus_tag=PHA56_RS20040;old_locus_tag=PHA56_20040 NZ_CP116214.1 Protein Homology CDS 4218647 4219525 . + 0 ID=cds-WP_004130445.1;Parent=gene-PHA56_RS20040;Dbxref=Genbank:WP_004130445.1;Name=WP_004130445.1;Note=CorC(YbeX) belongs to the Cyclin M Mg2+ Exporter (CNNM) family%2C and was characterized as belonging to a set of three proteins%2C at least one of which must be present for CorA to function.;Ontology_term=GO:0050660;gbkey=CDS;gene=corC;go_function=flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308723.1;locus_tag=PHA56_RS20040;product=CNNM family magnesium/cobalt transport protein CorC;protein_id=WP_004130445.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4219548 4221086 . + . ID=gene-PHA56_RS20045;Name=lnt;gbkey=Gene;gene=lnt;gene_biotype=protein_coding;locus_tag=PHA56_RS20045;old_locus_tag=PHA56_20045 NZ_CP116214.1 Protein Homology CDS 4219548 4221086 . + 0 ID=cds-WP_014837813.1;Parent=gene-PHA56_RS20045;Dbxref=Genbank:WP_014837813.1;Name=WP_014837813.1;Ontology_term=GO:0006497,GO:0042158,GO:0016410,GO:0016020;gbkey=CDS;gene=lnt;go_component=membrane|0016020||IEA;go_function=N-acyltransferase activity|0016410||IEA;go_process=protein lipidation|0006497||IEA,lipoprotein biosynthetic process|0042158||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225822.1;locus_tag=PHA56_RS20045;product=apolipoprotein N-acyltransferase;protein_id=WP_014837813.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4221444 4222355 . + . ID=gene-PHA56_RS20050;Name=PHA56_RS20050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS20050;old_locus_tag=PHA56_20050 NZ_CP116214.1 Protein Homology CDS 4221444 4222355 . + 0 ID=cds-WP_119834429.1;Parent=gene-PHA56_RS20050;Dbxref=Genbank:WP_119834429.1;Name=WP_119834429.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225821.1;locus_tag=PHA56_RS20050;product=amino acid ABC transporter substrate-binding protein;protein_id=WP_119834429.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4222519 4223259 . + . ID=gene-PHA56_RS20055;Name=PHA56_RS20055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS20055;old_locus_tag=PHA56_20055 NZ_CP116214.1 Protein Homology CDS 4222519 4223259 . + 0 ID=cds-WP_014837812.1;Parent=gene-PHA56_RS20055;Dbxref=Genbank:WP_014837812.1;Name=WP_014837812.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225820.1;locus_tag=PHA56_RS20055;product=amino acid ABC transporter permease;protein_id=WP_014837812.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4223259 4223933 . + . ID=gene-PHA56_RS20060;Name=gltK;gbkey=Gene;gene=gltK;gene_biotype=protein_coding;locus_tag=PHA56_RS20060;old_locus_tag=PHA56_20060 NZ_CP116214.1 Protein Homology CDS 4223259 4223933 . + 0 ID=cds-WP_004848815.1;Parent=gene-PHA56_RS20060;Dbxref=Genbank:WP_004848815.1;Name=WP_004848815.1;gbkey=CDS;gene=gltK;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225819.1;locus_tag=PHA56_RS20060;product=glutamate/aspartate ABC transporter permease GltK;protein_id=WP_004848815.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4223933 4224658 . + . ID=gene-PHA56_RS20065;Name=PHA56_RS20065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS20065;old_locus_tag=PHA56_20065 NZ_CP116214.1 Protein Homology CDS 4223933 4224658 . + 0 ID=cds-WP_004100186.1;Parent=gene-PHA56_RS20065;Dbxref=Genbank:WP_004100186.1;Name=WP_004100186.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020245804.1;locus_tag=PHA56_RS20065;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_004100186.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4225069 4226697 . + . ID=gene-PHA56_RS20070;Name=PHA56_RS20070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS20070;old_locus_tag=PHA56_20070 NZ_CP116214.1 Protein Homology CDS 4225069 4226697 . + 0 ID=cds-WP_224266766.1;Parent=gene-PHA56_RS20070;Dbxref=Genbank:WP_224266766.1;Name=WP_224266766.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004134170.1;locus_tag=PHA56_RS20070;product=ShlB/FhaC/HecB family hemolysin secretion/activation protein;protein_id=WP_224266766.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4226753 4228540 . + . ID=gene-PHA56_RS20075;Name=PHA56_RS20075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS20075;old_locus_tag=PHA56_20075 NZ_CP116214.1 Protein Homology CDS 4226753 4228540 . + 0 ID=cds-WP_014228405.1;Parent=gene-PHA56_RS20075;Dbxref=Genbank:WP_014228405.1;Name=WP_014228405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014228405.1;locus_tag=PHA56_RS20075;product=filamentous hemagglutinin N-terminal domain-containing protein;protein_id=WP_014228405.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4228741 4229223 . - . ID=gene-PHA56_RS20080;Name=PHA56_RS20080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS20080;old_locus_tag=PHA56_20080 NZ_CP116214.1 Protein Homology CDS 4228741 4229223 . - 0 ID=cds-WP_014228404.1;Parent=gene-PHA56_RS20080;Dbxref=Genbank:WP_014228404.1;Name=WP_014228404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459645.1;locus_tag=PHA56_RS20080;product=zinc ribbon-containing protein;protein_id=WP_014228404.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4229450 4232032 . + . ID=gene-PHA56_RS20085;Name=leuS;gbkey=Gene;gene=leuS;gene_biotype=protein_coding;locus_tag=PHA56_RS20085;old_locus_tag=PHA56_20085 NZ_CP116214.1 Protein Homology CDS 4229450 4232032 . + 0 ID=cds-WP_014228403.1;Parent=gene-PHA56_RS20085;Dbxref=Genbank:WP_014228403.1;Name=WP_014228403.1;Ontology_term=GO:0006429,GO:0004823,GO:0005737;gbkey=CDS;gene=leuS;go_component=cytoplasm|0005737||IEA;go_function=leucine-tRNA ligase activity|0004823||IEA;go_process=leucyl-tRNA aminoacylation|0006429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008456064.1;locus_tag=PHA56_RS20085;product=leucine--tRNA ligase;protein_id=WP_014228403.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4232047 4232637 . + . ID=gene-PHA56_RS20090;Name=lptE;gbkey=Gene;gene=lptE;gene_biotype=protein_coding;locus_tag=PHA56_RS20090;old_locus_tag=PHA56_20090 NZ_CP116214.1 Protein Homology CDS 4232047 4232637 . + 0 ID=cds-WP_004130425.1;Parent=gene-PHA56_RS20090;Dbxref=Genbank:WP_004130425.1;Name=WP_004130425.1;Ontology_term=GO:0043165,GO:0019867;gbkey=CDS;gene=lptE;go_component=outer membrane|0019867||IEA;go_process=Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459639.1;locus_tag=PHA56_RS20090;product=LPS assembly lipoprotein LptE;protein_id=WP_004130425.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4232637 4233668 . + . ID=gene-PHA56_RS20095;Name=holA;gbkey=Gene;gene=holA;gene_biotype=protein_coding;locus_tag=PHA56_RS20095;old_locus_tag=PHA56_20095 NZ_CP116214.1 Protein Homology CDS 4232637 4233668 . + 0 ID=cds-WP_189087224.1;Parent=gene-PHA56_RS20095;Dbxref=Genbank:WP_189087224.1;Name=WP_189087224.1;Ontology_term=GO:0006260,GO:0003887,GO:0009360;gbkey=CDS;gene=holA;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459638.1;locus_tag=PHA56_RS20095;product=DNA polymerase III subunit delta;protein_id=WP_189087224.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4233661 4234311 . + . ID=gene-PHA56_RS20100;Name=nadD;gbkey=Gene;gene=nadD;gene_biotype=protein_coding;locus_tag=PHA56_RS20100;old_locus_tag=PHA56_20100 NZ_CP116214.1 Protein Homology CDS 4233661 4234311 . + 0 ID=cds-WP_032694329.1;Parent=gene-PHA56_RS20100;Dbxref=Genbank:WP_032694329.1;Name=WP_032694329.1;Ontology_term=GO:0009435,GO:0016779;gbkey=CDS;gene=nadD;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225810.1;locus_tag=PHA56_RS20100;product=nicotinate-nucleotide adenylyltransferase;protein_id=WP_032694329.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4234358 4234987 . + . ID=gene-PHA56_RS20105;Name=PHA56_RS20105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS20105;old_locus_tag=PHA56_20105 NZ_CP116214.1 Protein Homology CDS 4234358 4234987 . + 0 ID=cds-WP_014228400.1;Parent=gene-PHA56_RS20105;Dbxref=Genbank:WP_014228400.1;Name=WP_014228400.1;Ontology_term=GO:0009236,GO:0043755;gbkey=CDS;go_function=alpha-ribazole phosphatase activity|0043755||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009485188.1;locus_tag=PHA56_RS20105;product=adenosylcobalamin/alpha-ribazole phosphatase;protein_id=WP_014228400.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4235209 4235526 . + . ID=gene-PHA56_RS20110;Name=rsfS;gbkey=Gene;gene=rsfS;gene_biotype=protein_coding;locus_tag=PHA56_RS20110;old_locus_tag=PHA56_20110 NZ_CP116214.1 Protein Homology CDS 4235209 4235526 . + 0 ID=cds-WP_004100162.1;Parent=gene-PHA56_RS20110;Dbxref=Genbank:WP_004100162.1;Name=WP_004100162.1;Ontology_term=GO:0017148,GO:0043022;gbkey=CDS;gene=rsfS;go_function=ribosome binding|0043022||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007373852.1;locus_tag=PHA56_RS20110;product=ribosome silencing factor;protein_id=WP_004100162.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4235530 4235997 . + . ID=gene-PHA56_RS20115;Name=rlmH;gbkey=Gene;gene=rlmH;gene_biotype=protein_coding;locus_tag=PHA56_RS20115;old_locus_tag=PHA56_20115 NZ_CP116214.1 Protein Homology CDS 4235530 4235997 . + 0 ID=cds-WP_004100160.1;Parent=gene-PHA56_RS20115;Dbxref=Genbank:WP_004100160.1;Name=WP_004100160.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;gene=rlmH;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016245807.1;locus_tag=PHA56_RS20115;product=23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH;protein_id=WP_004100160.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4236025 4237926 . + . ID=gene-PHA56_RS20120;Name=mrdA;gbkey=Gene;gene=mrdA;gene_biotype=protein_coding;locus_tag=PHA56_RS20120;old_locus_tag=PHA56_20120 NZ_CP116214.1 Protein Homology CDS 4236025 4237926 . + 0 ID=cds-WP_004130417.1;Parent=gene-PHA56_RS20120;Dbxref=Genbank:WP_004130417.1;Name=WP_004130417.1;Ontology_term=GO:0009252,GO:0008658,GO:0009002,GO:0016020;gbkey=CDS;gene=mrdA;go_component=membrane|0016020||IEA;go_function=penicillin binding|0008658||IEA,serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225806.1;locus_tag=PHA56_RS20120;product=peptidoglycan DD-transpeptidase MrdA;protein_id=WP_004130417.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4237926 4239038 . + . ID=gene-PHA56_RS20125;Name=mrdB;gbkey=Gene;gene=mrdB;gene_biotype=protein_coding;gene_synonym=rodA;locus_tag=PHA56_RS20125;old_locus_tag=PHA56_20125 NZ_CP116214.1 Protein Homology CDS 4237926 4239038 . + 0 ID=cds-WP_004100156.1;Parent=gene-PHA56_RS20125;Dbxref=Genbank:WP_004100156.1;Name=WP_004100156.1;Note=rod shape-determining protein RodA;gbkey=CDS;gene=mrdB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004885876.1;locus_tag=PHA56_RS20125;product=peptidoglycan glycosyltransferase MrdB;protein_id=WP_004100156.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4239049 4240149 . + . ID=gene-PHA56_RS20130;Name=rlpA;gbkey=Gene;gene=rlpA;gene_biotype=protein_coding;locus_tag=PHA56_RS20130;old_locus_tag=PHA56_20130 NZ_CP116214.1 Protein Homology CDS 4239049 4240149 . + 0 ID=cds-WP_119834430.1;Parent=gene-PHA56_RS20130;Dbxref=Genbank:WP_119834430.1;Name=WP_119834430.1;Ontology_term=GO:0042834;gbkey=CDS;gene=rlpA;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225804.1;locus_tag=PHA56_RS20130;product=endolytic peptidoglycan transglycosylase RlpA;protein_id=WP_119834430.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4240293 4241492 . + . ID=gene-PHA56_RS20135;Name=dacA;gbkey=Gene;gene=dacA;gene_biotype=protein_coding;locus_tag=PHA56_RS20135;old_locus_tag=PHA56_20135 NZ_CP116214.1 Protein Homology CDS 4240293 4241492 . + 0 ID=cds-WP_014228398.1;Parent=gene-PHA56_RS20135;Dbxref=Genbank:WP_014228398.1;Name=WP_014228398.1;Ontology_term=GO:0006508,GO:0009002;gbkey=CDS;gene=dacA;go_function=serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459629.1;locus_tag=PHA56_RS20135;product=D-alanyl-D-alanine carboxypeptidase DacA;protein_id=WP_014228398.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4241599 4241862 . + . ID=gene-PHA56_RS20140;Name=ybeD;gbkey=Gene;gene=ybeD;gene_biotype=protein_coding;locus_tag=PHA56_RS20140;old_locus_tag=PHA56_20140 NZ_CP116214.1 Protein Homology CDS 4241599 4241862 . + 0 ID=cds-WP_004100153.1;Parent=gene-PHA56_RS20140;Dbxref=Genbank:WP_004100153.1;Name=WP_004100153.1;gbkey=CDS;gene=ybeD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459628.1;locus_tag=PHA56_RS20140;product=DUF493 family protein YbeD;protein_id=WP_004100153.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4241963 4242607 . + . ID=gene-PHA56_RS20145;Name=lipB;gbkey=Gene;gene=lipB;gene_biotype=protein_coding;locus_tag=PHA56_RS20145;old_locus_tag=PHA56_20145 NZ_CP116214.1 Protein Homology CDS 4241963 4242607 . + 0 ID=cds-WP_038424214.1;Parent=gene-PHA56_RS20145;Dbxref=Genbank:WP_038424214.1;Name=WP_038424214.1;Ontology_term=GO:0009249,GO:0033819;gbkey=CDS;gene=lipB;go_function=lipoyl(octanoyl) transferase activity|0033819||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014228397.1;locus_tag=PHA56_RS20145;product=lipoyl(octanoyl) transferase LipB;protein_id=WP_038424214.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4242745 4243698 . + . ID=gene-PHA56_RS20150;Name=PHA56_RS20150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS20150;old_locus_tag=PHA56_20150 NZ_CP116214.1 Protein Homology CDS 4242745 4243698 . + 0 ID=cds-WP_014837806.1;Parent=gene-PHA56_RS20150;Dbxref=Genbank:WP_014837806.1;Name=WP_014837806.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014837806.1;locus_tag=PHA56_RS20150;product=YbeF family transcriptional regulator;protein_id=WP_014837806.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4243886 4244851 . + . ID=gene-PHA56_RS20155;Name=lipA;gbkey=Gene;gene=lipA;gene_biotype=protein_coding;locus_tag=PHA56_RS20155;old_locus_tag=PHA56_20155 NZ_CP116214.1 Protein Homology CDS 4243886 4244851 . + 0 ID=cds-WP_004848774.1;Parent=gene-PHA56_RS20155;Dbxref=Genbank:WP_004848774.1;Name=WP_004848774.1;Ontology_term=GO:0009107,GO:0016992,GO:0051539,GO:1904047;gbkey=CDS;gene=lipA;go_function=lipoate synthase activity|0016992||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=lipoate biosynthetic process|0009107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904980.1;locus_tag=PHA56_RS20155;product=lipoyl synthase;protein_id=WP_004848774.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4245078 4245281 . - . ID=gene-PHA56_RS20160;Name=tatE;gbkey=Gene;gene=tatE;gene_biotype=protein_coding;locus_tag=PHA56_RS20160;old_locus_tag=PHA56_20160 NZ_CP116214.1 Protein Homology CDS 4245078 4245281 . - 0 ID=cds-WP_004130411.1;Parent=gene-PHA56_RS20160;Dbxref=Genbank:WP_004130411.1;Name=WP_004130411.1;gbkey=CDS;gene=tatE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225798.1;locus_tag=PHA56_RS20160;product=twin-arginine translocase subunit TatE;protein_id=WP_004130411.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4245409 4246197 . - . ID=gene-PHA56_RS20165;Name=PHA56_RS20165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS20165;old_locus_tag=PHA56_20165 NZ_CP116214.1 Protein Homology CDS 4245409 4246197 . - 0 ID=cds-WP_014837805.1;Parent=gene-PHA56_RS20165;Dbxref=Genbank:WP_014837805.1;Name=WP_014837805.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225797.1;locus_tag=PHA56_RS20165;product=deaminated glutathione amidase;protein_id=WP_014837805.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4246289 4246672 . + . ID=gene-PHA56_RS20170;Name=crcB;gbkey=Gene;gene=crcB;gene_biotype=protein_coding;locus_tag=PHA56_RS20170;old_locus_tag=PHA56_20170 NZ_CP116214.1 Protein Homology CDS 4246289 4246672 . + 0 ID=cds-WP_004848768.1;Parent=gene-PHA56_RS20170;Dbxref=Genbank:WP_004848768.1;Name=WP_004848768.1;Ontology_term=GO:0016020;gbkey=CDS;gene=crcB;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225796.1;locus_tag=PHA56_RS20170;product=fluoride efflux transporter CrcB;protein_id=WP_004848768.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4246737 4246946 . - . ID=gene-PHA56_RS20175;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=PHA56_RS20175;old_locus_tag=PHA56_20175 NZ_CP116214.1 Protein Homology CDS 4246737 4246946 . - 0 ID=cds-WP_004100146.1;Parent=gene-PHA56_RS20175;Dbxref=Genbank:WP_004100146.1;Name=WP_004100146.1;gbkey=CDS;gene=cspE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225795.1;locus_tag=PHA56_RS20175;product=transcription antiterminator/RNA stability regulator CspE;protein_id=WP_004100146.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4247142 4247711 . - . ID=gene-PHA56_RS20180;Name=pagP;gbkey=Gene;gene=pagP;gene_biotype=protein_coding;locus_tag=PHA56_RS20180;old_locus_tag=PHA56_20180 NZ_CP116214.1 Protein Homology CDS 4247142 4247711 . - 0 ID=cds-WP_014228393.1;Parent=gene-PHA56_RS20180;Dbxref=Genbank:WP_014228393.1;Name=WP_014228393.1;gbkey=CDS;gene=pagP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004848766.1;locus_tag=PHA56_RS20180;product=lipid IV(A) palmitoyltransferase PagP;protein_id=WP_014228393.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4248008 4249381 . + . ID=gene-PHA56_RS20185;Name=dcuC;gbkey=Gene;gene=dcuC;gene_biotype=protein_coding;locus_tag=PHA56_RS20185;old_locus_tag=PHA56_20185 NZ_CP116214.1 Protein Homology CDS 4248008 4249381 . + 0 ID=cds-WP_014228392.1;Parent=gene-PHA56_RS20185;Dbxref=Genbank:WP_014228392.1;Name=WP_014228392.1;Ontology_term=GO:0015740,GO:0015556;gbkey=CDS;gene=dcuC;go_function=C4-dicarboxylate transmembrane transporter activity|0015556||IEA;go_process=C4-dicarboxylate transport|0015740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004111347.1;locus_tag=PHA56_RS20185;product=anaerobic C4-dicarboxylate transporter DcuC;protein_id=WP_014228392.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4249474 4250268 . + . ID=gene-PHA56_RS20190;Name=rna;gbkey=Gene;gene=rna;gene_biotype=protein_coding;locus_tag=PHA56_RS20190;old_locus_tag=PHA56_20190 NZ_CP116214.1 Protein Homology CDS 4249474 4250268 . + 0 ID=cds-WP_014228391.1;Parent=gene-PHA56_RS20190;Dbxref=Genbank:WP_014228391.1;Name=WP_014228391.1;gbkey=CDS;gene=rna;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004130406.1;locus_tag=PHA56_RS20190;product=ribonuclease I;protein_id=WP_014228391.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4250424 4250834 . + . ID=gene-PHA56_RS20195;Name=rnk;gbkey=Gene;gene=rnk;gene_biotype=protein_coding;locus_tag=PHA56_RS20195;old_locus_tag=PHA56_20195 NZ_CP116214.1 Protein Homology CDS 4250424 4250834 . + 0 ID=cds-WP_014228390.1;Parent=gene-PHA56_RS20195;Dbxref=Genbank:WP_014228390.1;Name=WP_014228390.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=rnk;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225791.1;locus_tag=PHA56_RS20195;product=nucleoside diphosphate kinase regulator;protein_id=WP_014228390.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4251034 4251462 . + . ID=gene-PHA56_RS20200;Name=uspG;gbkey=Gene;gene=uspG;gene_biotype=protein_coding;locus_tag=PHA56_RS20200;old_locus_tag=PHA56_20200 NZ_CP116214.1 Protein Homology CDS 4251034 4251462 . + 0 ID=cds-WP_004100140.1;Parent=gene-PHA56_RS20200;Dbxref=Genbank:WP_004100140.1;Name=WP_004100140.1;gbkey=CDS;gene=uspG;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225790.1;locus_tag=PHA56_RS20200;product=universal stress protein UspG;protein_id=WP_004100140.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4251539 4253104 . - . ID=gene-PHA56_RS20205;Name=ahpF;gbkey=Gene;gene=ahpF;gene_biotype=protein_coding;locus_tag=PHA56_RS20205;old_locus_tag=PHA56_20205 NZ_CP116214.1 Protein Homology CDS 4251539 4253104 . - 0 ID=cds-WP_004848755.1;Parent=gene-PHA56_RS20205;Dbxref=Genbank:WP_004848755.1;Name=WP_004848755.1;Ontology_term=GO:0006805,GO:0009398,GO:0016668;gbkey=CDS;gene=ahpF;go_function=oxidoreductase activity%2C acting on a sulfur group of donors%2C NAD(P) as acceptor|0016668||IEA;go_process=xenobiotic metabolic process|0006805||IEA,FMN biosynthetic process|0009398||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017455864.1;locus_tag=PHA56_RS20205;product=alkyl hydroperoxide reductase subunit F;protein_id=WP_004848755.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4253274 4253837 . - . ID=gene-PHA56_RS20210;Name=ahpC;gbkey=Gene;gene=ahpC;gene_biotype=protein_coding;locus_tag=PHA56_RS20210;old_locus_tag=PHA56_20210 NZ_CP116214.1 Protein Homology CDS 4253274 4253837 . - 0 ID=cds-WP_002894394.1;Parent=gene-PHA56_RS20210;Dbxref=Genbank:WP_002894394.1;Name=WP_002894394.1;Ontology_term=GO:0006979,GO:0102039;gbkey=CDS;gene=ahpC;go_function=NADH-dependent peroxiredoxin activity|0102039||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003858764.1;locus_tag=PHA56_RS20210;product=alkyl hydroperoxide reductase subunit C;protein_id=WP_002894394.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4254704 4255615 . + . ID=gene-PHA56_RS20215;Name=PHA56_RS20215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS20215;old_locus_tag=PHA56_20215 NZ_CP116214.1 Protein Homology CDS 4254704 4255615 . + 0 ID=cds-WP_014228389.1;Parent=gene-PHA56_RS20215;Dbxref=Genbank:WP_014228389.1;Name=WP_014228389.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014228389.1;locus_tag=PHA56_RS20215;product=LysR family transcriptional regulator;protein_id=WP_014228389.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4255720 4256943 . + . ID=gene-PHA56_RS20220;Name=PHA56_RS20220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS20220;old_locus_tag=PHA56_20220 NZ_CP116214.1 Protein Homology CDS 4255720 4256943 . + 0 ID=cds-WP_119834434.1;Parent=gene-PHA56_RS20220;Dbxref=Genbank:WP_119834434.1;Name=WP_119834434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225785.1;locus_tag=PHA56_RS20220;product=DUF3440 domain-containing protein;protein_id=WP_119834434.1;transl_table=11 NZ_CP116214.1 RefSeq pseudogene 4256928 4257556 . + . ID=gene-PHA56_RS20225;Name=PHA56_RS20225;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS20225;old_locus_tag=PHA56_20225;pseudo=true NZ_CP116214.1 Protein Homology CDS 4256928 4257556 . + 0 ID=cds-PHA56_RS20225;Parent=gene-PHA56_RS20225;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225784.1;locus_tag=PHA56_RS20225;product=ParB/RepB/Spo0J family partition protein;pseudo=true;transl_table=11 NZ_CP116214.1 RefSeq gene 4257557 4258702 . - . ID=gene-PHA56_RS20230;Name=PHA56_RS20230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS20230;old_locus_tag=PHA56_20230 NZ_CP116214.1 Protein Homology CDS 4257557 4258702 . - 0 ID=cds-WP_160742792.1;Parent=gene-PHA56_RS20230;Dbxref=Genbank:WP_160742792.1;Name=WP_160742792.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225783.1;locus_tag=PHA56_RS20230;product=pyridoxal phosphate-dependent aminotransferase;protein_id=WP_160742792.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4258897 4259586 . + . ID=gene-PHA56_RS20235;Name=mtnC;gbkey=Gene;gene=mtnC;gene_biotype=protein_coding;locus_tag=PHA56_RS20235;old_locus_tag=PHA56_20235 NZ_CP116214.1 Protein Homology CDS 4258897 4259586 . + 0 ID=cds-WP_014837800.1;Parent=gene-PHA56_RS20235;Dbxref=Genbank:WP_014837800.1;Name=WP_014837800.1;Ontology_term=GO:0019509,GO:0016791,GO:0016862;gbkey=CDS;gene=mtnC;go_function=phosphatase activity|0016791||IEA,intramolecular oxidoreductase activity%2C interconverting keto- and enol-groups|0016862||IEA;go_process=L-methionine salvage from methylthioadenosine|0019509||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225782.1;locus_tag=PHA56_RS20235;product=acireductone synthase;protein_id=WP_014837800.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4259583 4260125 . + . ID=gene-PHA56_RS20240;Name=PHA56_RS20240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS20240;old_locus_tag=PHA56_20240 NZ_CP116214.1 Protein Homology CDS 4259583 4260125 . + 0 ID=cds-WP_119834431.1;Parent=gene-PHA56_RS20240;Dbxref=Genbank:WP_119834431.1;Name=WP_119834431.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225781.1;locus_tag=PHA56_RS20240;product=acireductone dioxygenase;protein_id=WP_119834431.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4260309 4262618 . - . ID=gene-PHA56_RS20245;Name=PHA56_RS20245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS20245;old_locus_tag=PHA56_20245 NZ_CP116214.1 Protein Homology CDS 4260309 4262618 . - 0 ID=cds-WP_119834432.1;Parent=gene-PHA56_RS20245;Dbxref=Genbank:WP_119834432.1;Name=WP_119834432.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017146364.1;locus_tag=PHA56_RS20245;product=molybdopterin-dependent oxidoreductase;protein_id=WP_119834432.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4263157 4264137 . + . ID=gene-PHA56_RS20250;Name=PHA56_RS20250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS20250;old_locus_tag=PHA56_20250 NZ_CP116214.1 Protein Homology CDS 4263157 4264137 . + 0 ID=cds-WP_004848735.1;Parent=gene-PHA56_RS20250;Dbxref=Genbank:WP_004848735.1;Name=WP_004848735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225779.1;locus_tag=PHA56_RS20250;product=sugar ABC transporter substrate-binding protein;protein_id=WP_004848735.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4264182 4265687 . + . ID=gene-PHA56_RS20255;Name=PHA56_RS20255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS20255;old_locus_tag=PHA56_20255 NZ_CP116214.1 Protein Homology CDS 4264182 4265687 . + 0 ID=cds-WP_047725149.1;Parent=gene-PHA56_RS20255;Dbxref=Genbank:WP_047725149.1;Name=WP_047725149.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016535747.1;locus_tag=PHA56_RS20255;product=sugar ABC transporter ATP-binding protein;protein_id=WP_047725149.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4265684 4266670 . + . ID=gene-PHA56_RS20260;Name=PHA56_RS20260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS20260;old_locus_tag=PHA56_20260 NZ_CP116214.1 Protein Homology CDS 4265684 4266670 . + 0 ID=cds-WP_014228381.1;Parent=gene-PHA56_RS20260;Dbxref=Genbank:WP_014228381.1;Name=WP_014228381.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004100123.1;locus_tag=PHA56_RS20260;product=ABC transporter permease;protein_id=WP_014228381.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4266670 4267671 . + . ID=gene-PHA56_RS20265;Name=PHA56_RS20265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS20265;old_locus_tag=PHA56_20265 NZ_CP116214.1 Protein Homology CDS 4266670 4267671 . + 0 ID=cds-WP_004848729.1;Parent=gene-PHA56_RS20265;Dbxref=Genbank:WP_004848729.1;Name=WP_004848729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225776.1;locus_tag=PHA56_RS20265;product=ABC transporter permease;protein_id=WP_004848729.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4267683 4268627 . + . ID=gene-PHA56_RS20270;Name=PHA56_RS20270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS20270;old_locus_tag=PHA56_20270 NZ_CP116214.1 Protein Homology CDS 4267683 4268627 . + 0 ID=cds-WP_014228380.1;Parent=gene-PHA56_RS20270;Dbxref=Genbank:WP_014228380.1;Name=WP_014228380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004100119.1;locus_tag=PHA56_RS20270;product=sugar kinase;protein_id=WP_014228380.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4268666 4269694 . - . ID=gene-PHA56_RS20275;Name=PHA56_RS20275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS20275;old_locus_tag=PHA56_20275 NZ_CP116214.1 Protein Homology CDS 4268666 4269694 . - 0 ID=cds-WP_004848726.1;Parent=gene-PHA56_RS20275;Dbxref=Genbank:WP_004848726.1;Name=WP_004848726.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225774.1;locus_tag=PHA56_RS20275;product=2-hydroxyacid dehydrogenase;protein_id=WP_004848726.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4269691 4271187 . - . ID=gene-PHA56_RS20280;Name=PHA56_RS20280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS20280;old_locus_tag=PHA56_20280 NZ_CP116214.1 Protein Homology CDS 4269691 4271187 . - 0 ID=cds-WP_014228379.1;Parent=gene-PHA56_RS20280;Dbxref=Genbank:WP_014228379.1;Name=WP_014228379.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017146369.1;locus_tag=PHA56_RS20280;product=carbohydrate kinase;protein_id=WP_014228379.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4271212 4271823 . - . ID=gene-PHA56_RS20285;Name=PHA56_RS20285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS20285;old_locus_tag=PHA56_20285 NZ_CP116214.1 Protein Homology CDS 4271212 4271823 . - 0 ID=cds-WP_014228378.1;Parent=gene-PHA56_RS20285;Dbxref=Genbank:WP_014228378.1;Name=WP_014228378.1;Ontology_term=GO:0019509,GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;go_process=L-methionine salvage from methylthioadenosine|0019509||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014228378.1;locus_tag=PHA56_RS20285;product=methylthioribulose 1-phosphate dehydratase;protein_id=WP_014228378.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4272342 4273604 . + . ID=gene-PHA56_RS20290;Name=codB;gbkey=Gene;gene=codB;gene_biotype=protein_coding;locus_tag=PHA56_RS20290;old_locus_tag=PHA56_20290 NZ_CP116214.1 Protein Homology CDS 4272342 4273604 . + 0 ID=cds-WP_032694340.1;Parent=gene-PHA56_RS20290;Dbxref=Genbank:WP_032694340.1;Name=WP_032694340.1;Ontology_term=GO:0055085,GO:0015209,GO:0016020;gbkey=CDS;gene=codB;go_component=membrane|0016020||IEA;go_function=cytosine transmembrane transporter activity|0015209||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004848719.1;locus_tag=PHA56_RS20290;product=cytosine permease;protein_id=WP_032694340.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4273607 4274842 . + . ID=gene-PHA56_RS20295;Name=PHA56_RS20295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS20295;old_locus_tag=PHA56_20295 NZ_CP116214.1 Protein Homology CDS 4273607 4274842 . + 0 ID=cds-WP_014837790.1;Parent=gene-PHA56_RS20295;Dbxref=Genbank:WP_014837790.1;Name=WP_014837790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225770.1;locus_tag=PHA56_RS20295;product=PucR family transcriptional regulator ligand-binding domain-containing protein;protein_id=WP_014837790.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4274839 4276077 . + . ID=gene-PHA56_RS20300;Name=codA;gbkey=Gene;gene=codA;gene_biotype=protein_coding;locus_tag=PHA56_RS20300;old_locus_tag=PHA56_20300 NZ_CP116214.1 Protein Homology CDS 4274839 4276077 . + 0 ID=cds-WP_032694341.1;Parent=gene-PHA56_RS20300;Dbxref=Genbank:WP_032694341.1;Name=WP_032694341.1;Ontology_term=GO:0016810;gbkey=CDS;gene=codA;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225769.1;locus_tag=PHA56_RS20300;product=cytosine deaminase;protein_id=WP_032694341.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4276223 4277212 . + . ID=gene-PHA56_RS20305;Name=PHA56_RS20305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS20305;old_locus_tag=PHA56_20305 NZ_CP116214.1 Protein Homology CDS 4276223 4277212 . + 0 ID=cds-WP_038424211.1;Parent=gene-PHA56_RS20305;Dbxref=Genbank:WP_038424211.1;Name=WP_038424211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012542476.1;locus_tag=PHA56_RS20305;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_038424211.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4277334 4278143 . + . ID=gene-PHA56_RS20310;Name=PHA56_RS20310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS20310;old_locus_tag=PHA56_20310 NZ_CP116214.1 Protein Homology CDS 4277334 4278143 . + 0 ID=cds-WP_032694342.1;Parent=gene-PHA56_RS20310;Dbxref=Genbank:WP_032694342.1;Name=WP_032694342.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004130365.1;locus_tag=PHA56_RS20310;product=inositol monophosphatase;protein_id=WP_032694342.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4278375 4279736 . + . ID=gene-PHA56_RS20315;Name=PHA56_RS20315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS20315;old_locus_tag=PHA56_20315 NZ_CP116214.1 Protein Homology CDS 4278375 4279736 . + 0 ID=cds-WP_163585691.1;Parent=gene-PHA56_RS20315;Dbxref=Genbank:WP_163585691.1;Name=WP_163585691.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225766.1;locus_tag=PHA56_RS20315;product=MFS transporter;protein_id=WP_163585691.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4279762 4281030 . + . ID=gene-PHA56_RS20320;Name=PHA56_RS20320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS20320;old_locus_tag=PHA56_20320 NZ_CP116214.1 Protein Homology CDS 4279762 4281030 . + 0 ID=cds-WP_032694344.1;Parent=gene-PHA56_RS20320;Dbxref=Genbank:WP_032694344.1;Name=WP_032694344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225765.1;locus_tag=PHA56_RS20320;product=histidine-type phosphatase;protein_id=WP_032694344.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4281076 4282104 . - . ID=gene-PHA56_RS20325;Name=mtnA;gbkey=Gene;gene=mtnA;gene_biotype=protein_coding;locus_tag=PHA56_RS20325;old_locus_tag=PHA56_20325 NZ_CP116214.1 Protein Homology CDS 4281076 4282104 . - 0 ID=cds-WP_014837785.1;Parent=gene-PHA56_RS20325;Dbxref=Genbank:WP_014837785.1;Name=WP_014837785.1;Ontology_term=GO:0019509,GO:0046523;gbkey=CDS;gene=mtnA;go_function=S-methyl-5-thioribose-1-phosphate isomerase activity|0046523||IEA;go_process=L-methionine salvage from methylthioadenosine|0019509||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014837785.1;locus_tag=PHA56_RS20325;product=S-methyl-5-thioribose-1-phosphate isomerase;protein_id=WP_014837785.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4282207 4283406 . + . ID=gene-PHA56_RS20330;Name=mtnK;gbkey=Gene;gene=mtnK;gene_biotype=protein_coding;locus_tag=PHA56_RS20330;old_locus_tag=PHA56_20330 NZ_CP116214.1 Protein Homology CDS 4282207 4283406 . + 0 ID=cds-WP_032694345.1;Parent=gene-PHA56_RS20330;Dbxref=Genbank:WP_032694345.1;Name=WP_032694345.1;Ontology_term=GO:0019509,GO:0046522;gbkey=CDS;gene=mtnK;go_function=S-methyl-5-thioribose kinase activity|0046522||IEA;go_process=L-methionine salvage from methylthioadenosine|0019509||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016808894.1;locus_tag=PHA56_RS20330;product=S-methyl-5-thioribose kinase;protein_id=WP_032694345.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4283534 4284775 . - . ID=gene-PHA56_RS20335;Name=PHA56_RS20335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS20335;old_locus_tag=PHA56_20335 NZ_CP116214.1 Protein Homology CDS 4283534 4284775 . - 0 ID=cds-WP_004848703.1;Parent=gene-PHA56_RS20335;Dbxref=Genbank:WP_004848703.1;Name=WP_004848703.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225760.1;locus_tag=PHA56_RS20335;product=LVIVD repeat-containing protein;protein_id=WP_004848703.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4284772 4285836 . - . ID=gene-PHA56_RS20340;Name=PHA56_RS20340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS20340;old_locus_tag=PHA56_20340 NZ_CP116214.1 Protein Homology CDS 4284772 4285836 . - 0 ID=cds-WP_014228368.1;Parent=gene-PHA56_RS20340;Dbxref=Genbank:WP_014228368.1;Name=WP_014228368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225759.1;locus_tag=PHA56_RS20340;product=sugar ABC transporter substrate-binding protein;protein_id=WP_014228368.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4285981 4286979 . - . ID=gene-PHA56_RS20345;Name=PHA56_RS20345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS20345;old_locus_tag=PHA56_20345 NZ_CP116214.1 Protein Homology CDS 4285981 4286979 . - 0 ID=cds-WP_032694346.1;Parent=gene-PHA56_RS20345;Dbxref=Genbank:WP_032694346.1;Name=WP_032694346.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225758.1;locus_tag=PHA56_RS20345;product=ABC transporter permease;protein_id=WP_032694346.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4286976 4288478 . - . ID=gene-PHA56_RS20350;Name=PHA56_RS20350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS20350;old_locus_tag=PHA56_20350 NZ_CP116214.1 Protein Homology CDS 4286976 4288478 . - 0 ID=cds-WP_014228366.1;Parent=gene-PHA56_RS20350;Dbxref=Genbank:WP_014228366.1;Name=WP_014228366.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225757.1;locus_tag=PHA56_RS20350;product=sugar ABC transporter ATP-binding protein;protein_id=WP_014228366.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4288639 4289727 . + . ID=gene-PHA56_RS20355;Name=PHA56_RS20355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS20355;old_locus_tag=PHA56_20355 NZ_CP116214.1 Protein Homology CDS 4288639 4289727 . + 0 ID=cds-WP_014228365.1;Parent=gene-PHA56_RS20355;Dbxref=Genbank:WP_014228365.1;Name=WP_014228365.1;Ontology_term=GO:0016491,GO:0046872;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014837783.1;locus_tag=PHA56_RS20355;product=oxidoreductase;protein_id=WP_014228365.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4289914 4290207 . + . ID=gene-PHA56_RS20360;Name=PHA56_RS20360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS20360;old_locus_tag=PHA56_20360 NZ_CP116214.1 Protein Homology CDS 4289914 4290207 . + 0 ID=cds-WP_071889425.1;Parent=gene-PHA56_RS20360;Dbxref=Genbank:WP_071889425.1;Name=WP_071889425.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004100085.1;locus_tag=PHA56_RS20360;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_071889425.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4290188 4290592 . + . ID=gene-PHA56_RS20365;Name=PHA56_RS20365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS20365;old_locus_tag=PHA56_20365 NZ_CP116214.1 Protein Homology CDS 4290188 4290592 . + 0 ID=cds-WP_004100084.1;Parent=gene-PHA56_RS20365;Dbxref=Genbank:WP_004100084.1;Name=WP_004100084.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225753.1;locus_tag=PHA56_RS20365;product=helix-turn-helix domain-containing protein;protein_id=WP_004100084.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4290589 4290786 . - . ID=gene-PHA56_RS20370;Name=PHA56_RS20370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS20370;old_locus_tag=PHA56_20370 NZ_CP116214.1 Protein Homology CDS 4290589 4290786 . - 0 ID=cds-WP_004130340.1;Parent=gene-PHA56_RS20370;Dbxref=Genbank:WP_004130340.1;Name=WP_004130340.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904950.1;locus_tag=PHA56_RS20370;product=YbdD/YjiX family protein;protein_id=WP_004130340.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4290842 4292947 . - . ID=gene-PHA56_RS20375;Name=cstA;gbkey=Gene;gene=cstA;gene_biotype=protein_coding;locus_tag=PHA56_RS20375;old_locus_tag=PHA56_20375 NZ_CP116214.1 Protein Homology CDS 4290842 4292947 . - 0 ID=cds-WP_032694348.1;Parent=gene-PHA56_RS20375;Dbxref=Genbank:WP_032694348.1;Name=WP_032694348.1;Ontology_term=GO:0009267;gbkey=CDS;gene=cstA;go_process=cellular response to starvation|0009267||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225751.1;locus_tag=PHA56_RS20375;product=pyruvate/proton symporter CstA;protein_id=WP_032694348.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4293455 4293868 . - . ID=gene-PHA56_RS20380;Name=entH;gbkey=Gene;gene=entH;gene_biotype=protein_coding;locus_tag=PHA56_RS20380;old_locus_tag=PHA56_20380 NZ_CP116214.1 Protein Homology CDS 4293455 4293868 . - 0 ID=cds-WP_032694349.1;Parent=gene-PHA56_RS20380;Dbxref=Genbank:WP_032694349.1;Name=WP_032694349.1;gbkey=CDS;gene=entH;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225750.1;locus_tag=PHA56_RS20380;product=proofreading thioesterase EntH;protein_id=WP_032694349.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4293869 4294624 . - . ID=gene-PHA56_RS20385;Name=entA;gbkey=Gene;gene=entA;gene_biotype=protein_coding;locus_tag=PHA56_RS20385;old_locus_tag=PHA56_20385 NZ_CP116214.1 Protein Homology CDS 4293869 4294624 . - 0 ID=cds-WP_014837779.1;Parent=gene-PHA56_RS20385;Dbxref=Genbank:WP_014837779.1;Name=WP_014837779.1;gbkey=CDS;gene=entA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225749.1;locus_tag=PHA56_RS20385;product=2%2C3-dihydro-2%2C3-dihydroxybenzoate dehydrogenase EntA;protein_id=WP_014837779.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4294624 4295475 . - . ID=gene-PHA56_RS20390;Name=entB;gbkey=Gene;gene=entB;gene_biotype=protein_coding;locus_tag=PHA56_RS20390;old_locus_tag=PHA56_20390 NZ_CP116214.1 Protein Homology CDS 4294624 4295475 . - 0 ID=cds-WP_014228361.1;Parent=gene-PHA56_RS20390;Dbxref=Genbank:WP_014228361.1;Name=WP_014228361.1;gbkey=CDS;gene=entB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225748.1;locus_tag=PHA56_RS20390;product=enterobactin biosynthesis bifunctional isochorismatase/aryl carrier protein EntB;protein_id=WP_014228361.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4295489 4297096 . - . ID=gene-PHA56_RS20395;Name=entE;gbkey=Gene;gene=entE;gene_biotype=protein_coding;locus_tag=PHA56_RS20395;old_locus_tag=PHA56_20395 NZ_CP116214.1 Protein Homology CDS 4295489 4297096 . - 0 ID=cds-WP_042944597.1;Parent=gene-PHA56_RS20395;Dbxref=Genbank:WP_042944597.1;Name=WP_042944597.1;gbkey=CDS;gene=entE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225747.1;locus_tag=PHA56_RS20395;product=(2%2C3-dihydroxybenzoyl)adenylate synthase EntE;protein_id=WP_042944597.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4297106 4298281 . - . ID=gene-PHA56_RS20400;Name=entC;gbkey=Gene;gene=entC;gene_biotype=protein_coding;locus_tag=PHA56_RS20400;old_locus_tag=PHA56_20400 NZ_CP116214.1 Protein Homology CDS 4297106 4298281 . - 0 ID=cds-WP_032694351.1;Parent=gene-PHA56_RS20400;Dbxref=Genbank:WP_032694351.1;Name=WP_032694351.1;Ontology_term=GO:0008909;gbkey=CDS;gene=entC;go_function=isochorismate synthase activity|0008909||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004848677.1;locus_tag=PHA56_RS20400;product=isochorismate synthase EntC;protein_id=WP_032694351.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4298469 4299428 . + . ID=gene-PHA56_RS20405;Name=fepB;gbkey=Gene;gene=fepB;gene_biotype=protein_coding;locus_tag=PHA56_RS20405;old_locus_tag=PHA56_20405 NZ_CP116214.1 Protein Homology CDS 4298469 4299428 . + 0 ID=cds-WP_014837776.1;Parent=gene-PHA56_RS20405;Dbxref=Genbank:WP_014837776.1;Name=WP_014837776.1;gbkey=CDS;gene=fepB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004130329.1;locus_tag=PHA56_RS20405;product=Fe2+-enterobactin ABC transporter substrate-binding protein;protein_id=WP_014837776.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4299658 4301775 . + . ID=gene-PHA56_RS20410;Name=PHA56_RS20410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS20410;old_locus_tag=PHA56_20410 NZ_CP116214.1 Protein Homology CDS 4299658 4301775 . + 0 ID=cds-WP_208787271.1;Parent=gene-PHA56_RS20410;Dbxref=Genbank:WP_208787271.1;Name=WP_208787271.1;Ontology_term=GO:0005975;gbkey=CDS;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004100071.1;locus_tag=PHA56_RS20410;product=glycosyl hydrolase family 18 protein;protein_id=WP_208787271.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4302176 4302382 . - . ID=gene-PHA56_RS20415;Name=PHA56_RS20415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS20415;old_locus_tag=PHA56_20415 NZ_CP116214.1 GeneMarkS-2+ CDS 4302176 4302382 . - 0 ID=cds-WP_158657244.1;Parent=gene-PHA56_RS20415;Dbxref=Genbank:WP_158657244.1;Name=WP_158657244.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PHA56_RS20415;product=hypothetical protein;protein_id=WP_158657244.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4302499 4303740 . - . ID=gene-PHA56_RS20420;Name=entS;gbkey=Gene;gene=entS;gene_biotype=protein_coding;locus_tag=PHA56_RS20420;old_locus_tag=PHA56_20420 NZ_CP116214.1 Protein Homology CDS 4302499 4303740 . - 0 ID=cds-WP_014228354.1;Parent=gene-PHA56_RS20420;Dbxref=Genbank:WP_014228354.1;Name=WP_014228354.1;Ontology_term=GO:0042930,GO:0042931;gbkey=CDS;gene=entS;go_function=enterobactin transmembrane transporter activity|0042931||IEA;go_process=enterobactin transport|0042930||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225744.1;locus_tag=PHA56_RS20420;product=enterobactin transporter EntS;protein_id=WP_014228354.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4303853 4304860 . + . ID=gene-PHA56_RS20425;Name=fepD;gbkey=Gene;gene=fepD;gene_biotype=protein_coding;locus_tag=PHA56_RS20425;old_locus_tag=PHA56_20425 NZ_CP116214.1 Protein Homology CDS 4303853 4304860 . + 0 ID=cds-WP_119834435.1;Parent=gene-PHA56_RS20425;Dbxref=Genbank:WP_119834435.1;Name=WP_119834435.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;gene=fepD;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225743.1;locus_tag=PHA56_RS20425;product=Fe(3+)-siderophore ABC transporter permease;protein_id=WP_119834435.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4304857 4305849 . + . ID=gene-PHA56_RS20430;Name=fepG;gbkey=Gene;gene=fepG;gene_biotype=protein_coding;locus_tag=PHA56_RS20430;old_locus_tag=PHA56_20430 NZ_CP116214.1 Protein Homology CDS 4304857 4305849 . + 0 ID=cds-WP_009653197.1;Parent=gene-PHA56_RS20430;Dbxref=Genbank:WP_009653197.1;Name=WP_009653197.1;Ontology_term=GO:0022857;gbkey=CDS;gene=fepG;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225742.1;locus_tag=PHA56_RS20430;product=iron-enterobactin ABC transporter permease;protein_id=WP_009653197.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4305846 4306640 . + . ID=gene-PHA56_RS20435;Name=fepC;gbkey=Gene;gene=fepC;gene_biotype=protein_coding;locus_tag=PHA56_RS20435;old_locus_tag=PHA56_20435 NZ_CP116214.1 Protein Homology CDS 4305846 4306640 . + 0 ID=cds-WP_014837773.1;Parent=gene-PHA56_RS20435;Dbxref=Genbank:WP_014837773.1;Name=WP_014837773.1;Ontology_term=GO:0005524;gbkey=CDS;gene=fepC;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225741.1;locus_tag=PHA56_RS20435;product=iron-enterobactin ABC transporter ATP-binding protein;protein_id=WP_014837773.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4306739 4310620 . - . ID=gene-PHA56_RS20440;Name=entF;gbkey=Gene;gene=entF;gene_biotype=protein_coding;locus_tag=PHA56_RS20440;old_locus_tag=PHA56_20440 NZ_CP116214.1 Protein Homology CDS 4306739 4310620 . - 0 ID=cds-WP_119834436.1;Parent=gene-PHA56_RS20440;Dbxref=Genbank:WP_119834436.1;Name=WP_119834436.1;Ontology_term=GO:0009058,GO:0003824,GO:0031177;gbkey=CDS;gene=entF;go_function=catalytic activity|0003824||IEA,phosphopantetheine binding|0031177||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225740.1;locus_tag=PHA56_RS20440;product=enterobactin non-ribosomal peptide synthetase EntF;protein_id=WP_119834436.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4310631 4310834 . - . ID=gene-PHA56_RS20445;Name=PHA56_RS20445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS20445;old_locus_tag=PHA56_20445 NZ_CP116214.1 Protein Homology CDS 4310631 4310834 . - 0 ID=cds-WP_004848660.1;Parent=gene-PHA56_RS20445;Dbxref=Genbank:WP_004848660.1;Name=WP_004848660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225739.1;locus_tag=PHA56_RS20445;product=MbtH family NRPS accessory protein;protein_id=WP_004848660.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4310862 4312061 . - . ID=gene-PHA56_RS20450;Name=fes;gbkey=Gene;gene=fes;gene_biotype=protein_coding;locus_tag=PHA56_RS20450;old_locus_tag=PHA56_20450 NZ_CP116214.1 Protein Homology CDS 4310862 4312061 . - 0 ID=cds-WP_032693529.1;Parent=gene-PHA56_RS20450;Dbxref=Genbank:WP_032693529.1;Name=WP_032693529.1;Ontology_term=GO:0005506,GO:0008849;gbkey=CDS;gene=fes;go_function=iron ion binding|0005506||IEA,enterochelin esterase activity|0008849||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004848659.1;locus_tag=PHA56_RS20450;product=enterochelin esterase;protein_id=WP_032693529.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4312334 4314583 . + . ID=gene-PHA56_RS20455;Name=PHA56_RS20455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS20455;old_locus_tag=PHA56_20455 NZ_CP116214.1 Protein Homology CDS 4312334 4314583 . + 0 ID=cds-WP_032693528.1;Parent=gene-PHA56_RS20455;Dbxref=Genbank:WP_032693528.1;Name=WP_032693528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225737.1;locus_tag=PHA56_RS20455;product=TonB-dependent siderophore receptor;protein_id=WP_032693528.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4314652 4315275 . + . ID=gene-PHA56_RS20460;Name=entD;gbkey=Gene;gene=entD;gene_biotype=protein_coding;locus_tag=PHA56_RS20460;old_locus_tag=PHA56_20460 NZ_CP116214.1 Protein Homology CDS 4314652 4315275 . + 0 ID=cds-WP_014228347.1;Parent=gene-PHA56_RS20460;Dbxref=Genbank:WP_014228347.1;Name=WP_014228347.1;Ontology_term=GO:0009239,GO:0000287,GO:0008897,GO:0009366;gbkey=CDS;gene=entD;go_component=enterobactin synthetase complex|0009366||IEA;go_function=magnesium ion binding|0000287||IEA,holo-[acyl-carrier-protein] synthase activity|0008897||IEA;go_process=enterobactin biosynthetic process|0009239||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017146386.1;locus_tag=PHA56_RS20460;product=enterobactin synthase subunit EntD;protein_id=WP_014228347.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4315331 4316266 . - . ID=gene-PHA56_RS20465;Name=PHA56_RS20465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS20465;old_locus_tag=PHA56_20465 NZ_CP116214.1 Protein Homology CDS 4315331 4316266 . - 0 ID=cds-WP_014228346.1;Parent=gene-PHA56_RS20465;Dbxref=Genbank:WP_014228346.1;Name=WP_014228346.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020801572.1;locus_tag=PHA56_RS20465;product=transketolase C-terminal domain-containing protein;protein_id=WP_014228346.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4316259 4317089 . - . ID=gene-PHA56_RS20470;Name=PHA56_RS20470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS20470;old_locus_tag=PHA56_20470 NZ_CP116214.1 Protein Homology CDS 4316259 4317089 . - 0 ID=cds-WP_119834437.1;Parent=gene-PHA56_RS20470;Dbxref=Genbank:WP_119834437.1;Name=WP_119834437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225734.1;locus_tag=PHA56_RS20470;product=transketolase;protein_id=WP_119834437.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4317454 4318404 . + . ID=gene-PHA56_RS20475;Name=PHA56_RS20475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS20475;old_locus_tag=PHA56_20475 NZ_CP116214.1 Protein Homology CDS 4317454 4318404 . + 0 ID=cds-WP_004848649.1;Parent=gene-PHA56_RS20475;Dbxref=Genbank:WP_004848649.1;Name=WP_004848649.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004130309.1;locus_tag=PHA56_RS20475;product=sugar-binding transcriptional regulator;protein_id=WP_004848649.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4318767 4320287 . + . ID=gene-PHA56_RS20480;Name=PHA56_RS20480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS20480;old_locus_tag=PHA56_20480 NZ_CP116214.1 Protein Homology CDS 4318767 4320287 . + 0 ID=cds-WP_032693527.1;Parent=gene-PHA56_RS20480;Dbxref=Genbank:WP_032693527.1;Name=WP_032693527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225732.1;locus_tag=PHA56_RS20480;product=FGGY-family carbohydrate kinase;protein_id=WP_032693527.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4320568 4321503 . + . ID=gene-PHA56_RS20485;Name=PHA56_RS20485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS20485;old_locus_tag=PHA56_20485 NZ_CP116214.1 Protein Homology CDS 4320568 4321503 . + 0 ID=cds-WP_004130307.1;Parent=gene-PHA56_RS20485;Dbxref=Genbank:WP_004130307.1;Name=WP_004130307.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225731.1;locus_tag=PHA56_RS20485;product=D-ribose ABC transporter substrate-binding protein;protein_id=WP_004130307.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4321547 4322167 . + . ID=gene-PHA56_RS20490;Name=PHA56_RS20490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS20490;old_locus_tag=PHA56_20490 NZ_CP116214.1 Protein Homology CDS 4321547 4322167 . + 0 ID=cds-WP_014228344.1;Parent=gene-PHA56_RS20490;Dbxref=Genbank:WP_014228344.1;Name=WP_014228344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225730.1;locus_tag=PHA56_RS20490;product=DUF2291 domain-containing protein;protein_id=WP_014228344.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4322169 4323713 . + . ID=gene-PHA56_RS20495;Name=PHA56_RS20495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS20495;old_locus_tag=PHA56_20495 NZ_CP116214.1 Protein Homology CDS 4322169 4323713 . + 0 ID=cds-WP_014228343.1;Parent=gene-PHA56_RS20495;Dbxref=Genbank:WP_014228343.1;Name=WP_014228343.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225729.1;locus_tag=PHA56_RS20495;product=sugar ABC transporter ATP-binding protein;protein_id=WP_014228343.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4323731 4324786 . + . ID=gene-PHA56_RS20500;Name=PHA56_RS20500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS20500;old_locus_tag=PHA56_20500 NZ_CP116214.1 Protein Homology CDS 4323731 4324786 . + 0 ID=cds-WP_004848640.1;Parent=gene-PHA56_RS20500;Dbxref=Genbank:WP_004848640.1;Name=WP_004848640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225728.1;locus_tag=PHA56_RS20500;product=ABC transporter permease;protein_id=WP_004848640.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4324847 4325644 . + . ID=gene-PHA56_RS20505;Name=PHA56_RS20505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS20505;old_locus_tag=PHA56_20505 NZ_CP116214.1 Protein Homology CDS 4324847 4325644 . + 0 ID=cds-WP_014228342.1;Parent=gene-PHA56_RS20505;Dbxref=Genbank:WP_014228342.1;Name=WP_014228342.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225726.1;locus_tag=PHA56_RS20505;product=SDR family oxidoreductase;protein_id=WP_014228342.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4325824 4326609 . + . ID=gene-PHA56_RS20510;Name=PHA56_RS20510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS20510;old_locus_tag=PHA56_20510 NZ_CP116214.1 Protein Homology CDS 4325824 4326609 . + 0 ID=cds-WP_004130297.1;Parent=gene-PHA56_RS20510;Dbxref=Genbank:WP_004130297.1;Name=WP_004130297.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225725.1;locus_tag=PHA56_RS20510;product=SDR family oxidoreductase;protein_id=WP_004130297.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4326804 4326956 . - . ID=gene-PHA56_RS20515;Name=PHA56_RS20515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS20515;old_locus_tag=PHA56_20515 NZ_CP116214.1 Protein Homology CDS 4326804 4326956 . - 0 ID=cds-WP_004130292.1;Parent=gene-PHA56_RS20515;Dbxref=Genbank:WP_004130292.1;Name=WP_004130292.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311643.1;locus_tag=PHA56_RS20515;product=Hok/Gef family protein;protein_id=WP_004130292.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4327179 4329212 . - . ID=gene-PHA56_RS20520;Name=betT;gbkey=Gene;gene=betT;gene_biotype=protein_coding;locus_tag=PHA56_RS20520;old_locus_tag=PHA56_20520 NZ_CP116214.1 Protein Homology CDS 4327179 4329212 . - 0 ID=cds-WP_025107047.1;Parent=gene-PHA56_RS20520;Dbxref=Genbank:WP_025107047.1;Name=WP_025107047.1;gbkey=CDS;gene=betT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009653175.1;locus_tag=PHA56_RS20520;product=choline BCCT transporter BetT;protein_id=WP_025107047.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4329341 4329934 . + . ID=gene-PHA56_RS20525;Name=betI;gbkey=Gene;gene=betI;gene_biotype=protein_coding;locus_tag=PHA56_RS20525;old_locus_tag=PHA56_20525 NZ_CP116214.1 Protein Homology CDS 4329341 4329934 . + 0 ID=cds-WP_032693526.1;Parent=gene-PHA56_RS20525;Dbxref=Genbank:WP_032693526.1;Name=WP_032693526.1;Ontology_term=GO:0003677;gbkey=CDS;gene=betI;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004848631.1;locus_tag=PHA56_RS20525;product=transcriptional regulator BetI;protein_id=WP_032693526.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4329945 4331417 . + . ID=gene-PHA56_RS20530;Name=betB;gbkey=Gene;gene=betB;gene_biotype=protein_coding;locus_tag=PHA56_RS20530;old_locus_tag=PHA56_20530 NZ_CP116214.1 Protein Homology CDS 4329945 4331417 . + 0 ID=cds-WP_032693525.1;Parent=gene-PHA56_RS20530;Dbxref=Genbank:WP_032693525.1;Name=WP_032693525.1;Ontology_term=GO:0019285,GO:0008802,GO:0046872;gbkey=CDS;gene=betB;go_function=betaine-aldehyde dehydrogenase activity|0008802||IEA,metal ion binding|0046872||IEA;go_process=glycine betaine biosynthetic process from choline|0019285||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225716.1;locus_tag=PHA56_RS20530;product=betaine-aldehyde dehydrogenase;protein_id=WP_032693525.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4331432 4333096 . + . ID=gene-PHA56_RS20535;Name=betA;gbkey=Gene;gene=betA;gene_biotype=protein_coding;locus_tag=PHA56_RS20535;old_locus_tag=PHA56_20535 NZ_CP116214.1 Protein Homology CDS 4331432 4333096 . + 0 ID=cds-WP_014837759.1;Parent=gene-PHA56_RS20535;Dbxref=Genbank:WP_014837759.1;Name=WP_014837759.1;Ontology_term=GO:0019285,GO:0008812;gbkey=CDS;gene=betA;go_function=choline dehydrogenase activity|0008812||IEA;go_process=glycine betaine biosynthetic process from choline|0019285||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225715.1;locus_tag=PHA56_RS20535;product=choline dehydrogenase;protein_id=WP_014837759.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4333148 4333843 . - . ID=gene-PHA56_RS20540;Name=PHA56_RS20540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS20540;old_locus_tag=PHA56_20540 NZ_CP116214.1 Protein Homology CDS 4333148 4333843 . - 0 ID=cds-WP_014228336.1;Parent=gene-PHA56_RS20540;Dbxref=Genbank:WP_014228336.1;Name=WP_014228336.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225714.1;locus_tag=PHA56_RS20540;product=GNAT family protein;protein_id=WP_014228336.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4334053 4335621 . + . ID=gene-PHA56_RS20545;Name=PHA56_RS20545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS20545;old_locus_tag=PHA56_20545 NZ_CP116214.1 Protein Homology CDS 4334053 4335621 . + 0 ID=cds-WP_025107051.1;Parent=gene-PHA56_RS20545;Dbxref=Genbank:WP_025107051.1;Name=WP_025107051.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225713.1;locus_tag=PHA56_RS20545;product=ABC transporter substrate-binding protein;protein_id=WP_025107051.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4335786 4336835 . + . ID=gene-PHA56_RS20550;Name=PHA56_RS20550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS20550;old_locus_tag=PHA56_20550 NZ_CP116214.1 Protein Homology CDS 4335786 4336835 . + 0 ID=cds-WP_223226811.1;Parent=gene-PHA56_RS20550;Dbxref=Genbank:WP_223226811.1;Name=WP_223226811.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014228334.1;locus_tag=PHA56_RS20550;product=ABC transporter permease;protein_id=WP_223226811.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4336835 4337668 . + . ID=gene-PHA56_RS20555;Name=PHA56_RS20555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS20555;old_locus_tag=PHA56_20555 NZ_CP116214.1 Protein Homology CDS 4336835 4337668 . + 0 ID=cds-WP_014228333.1;Parent=gene-PHA56_RS20555;Dbxref=Genbank:WP_014228333.1;Name=WP_014228333.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225711.1;locus_tag=PHA56_RS20555;product=ABC transporter permease;protein_id=WP_014228333.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4337661 4338497 . + . ID=gene-PHA56_RS20560;Name=PHA56_RS20560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS20560;old_locus_tag=PHA56_20560 NZ_CP116214.1 Protein Homology CDS 4337661 4338497 . + 0 ID=cds-WP_032693523.1;Parent=gene-PHA56_RS20560;Dbxref=Genbank:WP_032693523.1;Name=WP_032693523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225710.1;locus_tag=PHA56_RS20560;product=ABC transporter ATP-binding protein;protein_id=WP_032693523.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4338484 4339188 . + . ID=gene-PHA56_RS20565;Name=PHA56_RS20565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS20565;old_locus_tag=PHA56_20565 NZ_CP116214.1 Protein Homology CDS 4338484 4339188 . + 0 ID=cds-WP_032693522.1;Parent=gene-PHA56_RS20565;Dbxref=Genbank:WP_032693522.1;Name=WP_032693522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014228331.1;locus_tag=PHA56_RS20565;product=ABC transporter ATP-binding protein;protein_id=WP_032693522.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4339297 4340634 . - . ID=gene-PHA56_RS20570;Name=PHA56_RS20570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS20570;old_locus_tag=PHA56_20570 NZ_CP116214.1 Protein Homology CDS 4339297 4340634 . - 0 ID=cds-WP_032693521.1;Parent=gene-PHA56_RS20570;Dbxref=Genbank:WP_032693521.1;Name=WP_032693521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225707.1;locus_tag=PHA56_RS20570;product=aspartate aminotransferase family protein;protein_id=WP_032693521.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4340817 4341581 . + . ID=gene-PHA56_RS20575;Name=PHA56_RS20575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS20575;old_locus_tag=PHA56_20575 NZ_CP116214.1 Protein Homology CDS 4340817 4341581 . + 0 ID=cds-WP_014228329.1;Parent=gene-PHA56_RS20575;Dbxref=Genbank:WP_014228329.1;Name=WP_014228329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225706.1;locus_tag=PHA56_RS20575;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_014228329.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4342126 4342887 . - . ID=gene-PHA56_RS20580;Name=PHA56_RS20580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS20580;old_locus_tag=PHA56_20580 NZ_CP116214.1 Protein Homology CDS 4342126 4342887 . - 0 ID=cds-WP_014228328.1;Parent=gene-PHA56_RS20580;Dbxref=Genbank:WP_014228328.1;Name=WP_014228328.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225705.1;locus_tag=PHA56_RS20580;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_014228328.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4342880 4343545 . - . ID=gene-PHA56_RS20585;Name=PHA56_RS20585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS20585;old_locus_tag=PHA56_20585 NZ_CP116214.1 Protein Homology CDS 4342880 4343545 . - 0 ID=cds-WP_032695098.1;Parent=gene-PHA56_RS20585;Dbxref=Genbank:WP_032695098.1;Name=WP_032695098.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004848615.1;locus_tag=PHA56_RS20585;product=amino acid ABC transporter permease;protein_id=WP_032695098.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4343560 4344201 . - . ID=gene-PHA56_RS20590;Name=PHA56_RS20590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS20590;old_locus_tag=PHA56_20590 NZ_CP116214.1 Protein Homology CDS 4343560 4344201 . - 0 ID=cds-WP_004100025.1;Parent=gene-PHA56_RS20590;Dbxref=Genbank:WP_004100025.1;Name=WP_004100025.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225703.1;locus_tag=PHA56_RS20590;product=amino acid ABC transporter permease;protein_id=WP_004100025.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4344250 4345101 . - . ID=gene-PHA56_RS20595;Name=PHA56_RS20595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS20595;old_locus_tag=PHA56_20595 NZ_CP116214.1 Protein Homology CDS 4344250 4345101 . - 0 ID=cds-WP_004848610.1;Parent=gene-PHA56_RS20595;Dbxref=Genbank:WP_004848610.1;Name=WP_004848610.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225702.1;locus_tag=PHA56_RS20595;product=transporter substrate-binding domain-containing protein;protein_id=WP_004848610.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4345336 4346802 . + . ID=gene-PHA56_RS20600;Name=PHA56_RS20600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS20600;old_locus_tag=PHA56_20600 NZ_CP116214.1 Protein Homology CDS 4345336 4346802 . + 0 ID=cds-WP_014228326.1;Parent=gene-PHA56_RS20600;Dbxref=Genbank:WP_014228326.1;Name=WP_014228326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225701.1;locus_tag=PHA56_RS20600;product=PLP-dependent aminotransferase family protein;protein_id=WP_014228326.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4346827 4347468 . - . ID=gene-PHA56_RS20605;Name=PHA56_RS20605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS20605;old_locus_tag=PHA56_20605 NZ_CP116214.1 Protein Homology CDS 4346827 4347468 . - 0 ID=cds-WP_014228325.1;Parent=gene-PHA56_RS20605;Dbxref=Genbank:WP_014228325.1;Name=WP_014228325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014228325.1;locus_tag=PHA56_RS20605;product=LysE family translocator;protein_id=WP_014228325.1;transl_table=11 NZ_CP116214.1 RefSeq pseudogene 4347744 4348160 . - . ID=gene-PHA56_RS20610;Name=PHA56_RS20610;end_range=4348160,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS20610;old_locus_tag=PHA56_20610;partial=true;pseudo=true NZ_CP116214.1 Protein Homology CDS 4347744 4348160 . - 0 ID=cds-PHA56_RS20610;Parent=gene-PHA56_RS20610;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=4348160,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225700.1;locus_tag=PHA56_RS20610;partial=true;product=PLP-dependent aminotransferase family protein;pseudo=true;transl_table=11 NZ_CP116214.1 RefSeq pseudogene 4348170 4348855 . + . ID=gene-PHA56_RS20615;Name=PHA56_RS20615;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS20615;old_locus_tag=PHA56_20615;partial=true;pseudo=true;start_range=.,4348170 NZ_CP116214.1 Protein Homology CDS 4348170 4348855 . + 0 ID=cds-PHA56_RS20615;Parent=gene-PHA56_RS20615;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016831206.1;locus_tag=PHA56_RS20615;partial=true;product=DMT family transporter;pseudo=true;start_range=.,4348170;transl_table=11 NZ_CP116214.1 RefSeq gene 4348845 4349045 . + . ID=gene-PHA56_RS20620;Name=PHA56_RS20620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS20620;old_locus_tag=PHA56_20620 NZ_CP116214.1 GeneMarkS-2+ CDS 4348845 4349045 . + 0 ID=cds-WP_101827190.1;Parent=gene-PHA56_RS20620;Dbxref=Genbank:WP_101827190.1;Name=WP_101827190.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PHA56_RS20620;product=hypothetical protein;protein_id=WP_101827190.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4349673 4350941 . - . ID=gene-PHA56_RS20625;Name=PHA56_RS20625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS20625;old_locus_tag=PHA56_20625 NZ_CP116214.1 Protein Homology CDS 4349673 4350941 . - 0 ID=cds-WP_032695063.1;Parent=gene-PHA56_RS20625;Dbxref=Genbank:WP_032695063.1;Name=WP_032695063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014228322.1;locus_tag=PHA56_RS20625;product=Zn-dependent hydrolase;protein_id=WP_032695063.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4350931 4352115 . - . ID=gene-PHA56_RS20630;Name=PHA56_RS20630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS20630;old_locus_tag=PHA56_20630 NZ_CP116214.1 Protein Homology CDS 4350931 4352115 . - 0 ID=cds-WP_119834439.1;Parent=gene-PHA56_RS20630;Dbxref=Genbank:WP_119834439.1;Name=WP_119834439.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004848598.1;locus_tag=PHA56_RS20630;product=amidase;protein_id=WP_119834439.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4352134 4353144 . - . ID=gene-PHA56_RS20635;Name=PHA56_RS20635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS20635;old_locus_tag=PHA56_20635 NZ_CP116214.1 Protein Homology CDS 4352134 4353144 . - 0 ID=cds-WP_119834440.1;Parent=gene-PHA56_RS20635;Dbxref=Genbank:WP_119834440.1;Name=WP_119834440.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016809134.1;locus_tag=PHA56_RS20635;product=ABC transporter ATP-binding protein;protein_id=WP_119834440.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4353134 4354177 . - . ID=gene-PHA56_RS20640;Name=PHA56_RS20640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS20640;old_locus_tag=PHA56_20640 NZ_CP116214.1 Protein Homology CDS 4353134 4354177 . - 0 ID=cds-WP_004848592.1;Parent=gene-PHA56_RS20640;Dbxref=Genbank:WP_004848592.1;Name=WP_004848592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004130245.1;locus_tag=PHA56_RS20640;product=ABC transporter ATP-binding protein;protein_id=WP_004848592.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4354181 4355074 . - . ID=gene-PHA56_RS20645;Name=PHA56_RS20645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS20645;old_locus_tag=PHA56_20645 NZ_CP116214.1 Protein Homology CDS 4354181 4355074 . - 0 ID=cds-WP_014228319.1;Parent=gene-PHA56_RS20645;Dbxref=Genbank:WP_014228319.1;Name=WP_014228319.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008805546.1;locus_tag=PHA56_RS20645;product=ABC transporter permease;protein_id=WP_014228319.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4355077 4356030 . - . ID=gene-PHA56_RS20650;Name=PHA56_RS20650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS20650;old_locus_tag=PHA56_20650 NZ_CP116214.1 Protein Homology CDS 4355077 4356030 . - 0 ID=cds-WP_014228318.1;Parent=gene-PHA56_RS20650;Dbxref=Genbank:WP_014228318.1;Name=WP_014228318.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012968749.1;locus_tag=PHA56_RS20650;product=ABC transporter permease;protein_id=WP_014228318.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4356049 4357713 . - . ID=gene-PHA56_RS20655;Name=PHA56_RS20655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS20655;old_locus_tag=PHA56_20655 NZ_CP116214.1 Protein Homology CDS 4356049 4357713 . - 0 ID=cds-WP_014228317.1;Parent=gene-PHA56_RS20655;Dbxref=Genbank:WP_014228317.1;Name=WP_014228317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004848585.1;locus_tag=PHA56_RS20655;product=ABC transporter substrate-binding protein;protein_id=WP_014228317.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4358038 4359153 . + . ID=gene-PHA56_RS20660;Name=PHA56_RS20660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS20660;old_locus_tag=PHA56_20660 NZ_CP116214.1 Protein Homology CDS 4358038 4359153 . + 0 ID=cds-WP_119834441.1;Parent=gene-PHA56_RS20660;Dbxref=Genbank:WP_119834441.1;Name=WP_119834441.1;Ontology_term=GO:0042398,GO:0004357;gbkey=CDS;go_function=glutamate-cysteine ligase activity|0004357||IEA;go_process=cellular modified amino acid biosynthetic process|0042398||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225698.1;locus_tag=PHA56_RS20660;product=YbdK family carboxylate-amine ligase;protein_id=WP_119834441.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4359205 4359924 . + . ID=gene-PHA56_RS20665;Name=PHA56_RS20665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS20665;old_locus_tag=PHA56_20665 NZ_CP116214.1 Protein Homology CDS 4359205 4359924 . + 0 ID=cds-WP_119834442.1;Parent=gene-PHA56_RS20665;Dbxref=Genbank:WP_119834442.1;Name=WP_119834442.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014837746.1;locus_tag=PHA56_RS20665;product=phosphodiester glycosidase family protein;protein_id=WP_119834442.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4360568 4363660 . - . ID=gene-PHA56_RS20670;Name=PHA56_RS20670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS20670;old_locus_tag=PHA56_20670 NZ_CP116214.1 Protein Homology CDS 4360568 4363660 . - 0 ID=cds-WP_088168785.1;Parent=gene-PHA56_RS20670;Dbxref=Genbank:WP_088168785.1;Name=WP_088168785.1;Ontology_term=GO:0006810,GO:0015562,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004848581.1;locus_tag=PHA56_RS20670;product=efflux RND transporter permease subunit;protein_id=WP_088168785.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4363671 4364753 . - . ID=gene-PHA56_RS20675;Name=PHA56_RS20675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS20675;old_locus_tag=PHA56_20675 NZ_CP116214.1 Protein Homology CDS 4363671 4364753 . - 0 ID=cds-WP_119834443.1;Parent=gene-PHA56_RS20675;Dbxref=Genbank:WP_119834443.1;Name=WP_119834443.1;Ontology_term=GO:0006810,GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004111175.1;locus_tag=PHA56_RS20675;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_119834443.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4364824 4367547 . - . ID=gene-PHA56_RS20680;Name=PHA56_RS20680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS20680;old_locus_tag=PHA56_20680 NZ_CP116214.1 Protein Homology CDS 4364824 4367547 . - 0 ID=cds-WP_014228313.1;Parent=gene-PHA56_RS20680;Dbxref=Genbank:WP_014228313.1;Name=WP_014228313.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014228313.1;locus_tag=PHA56_RS20680;product=cation-transporting P-type ATPase;protein_id=WP_014228313.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4368042 4368290 . + . ID=gene-PHA56_RS20685;Name=PHA56_RS20685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS20685;old_locus_tag=PHA56_20685 NZ_CP116214.1 Protein Homology CDS 4368042 4368290 . + 0 ID=cds-WP_014228312.1;Parent=gene-PHA56_RS20685;Dbxref=Genbank:WP_014228312.1;Name=WP_014228312.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225690.1;locus_tag=PHA56_RS20685;product=DUF1158 domain-containing protein;protein_id=WP_014228312.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4368219 4369841 . - . ID=gene-PHA56_RS20690;Name=PHA56_RS20690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS20690;old_locus_tag=PHA56_20690 NZ_CP116214.1 Protein Homology CDS 4368219 4369841 . - 0 ID=cds-WP_119834444.1;Parent=gene-PHA56_RS20690;Dbxref=Genbank:WP_119834444.1;Name=WP_119834444.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016809127.1;locus_tag=PHA56_RS20690;product=alpha/beta hydrolase-fold protein;protein_id=WP_119834444.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4369995 4372139 . + . ID=gene-PHA56_RS20695;Name=PHA56_RS20695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS20695;old_locus_tag=PHA56_20695 NZ_CP116214.1 Protein Homology CDS 4369995 4372139 . + 0 ID=cds-WP_119834445.1;Parent=gene-PHA56_RS20695;Dbxref=Genbank:WP_119834445.1;Name=WP_119834445.1;Ontology_term=GO:0015891,GO:0015343,GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;go_function=siderophore-iron transmembrane transporter activity|0015343||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004130223.1;locus_tag=PHA56_RS20695;product=TonB-dependent siderophore receptor;protein_id=WP_119834445.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4372176 4372517 . - . ID=gene-PHA56_RS20700;Name=PHA56_RS20700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS20700;old_locus_tag=PHA56_20700 NZ_CP116214.1 Protein Homology CDS 4372176 4372517 . - 0 ID=cds-WP_004848570.1;Parent=gene-PHA56_RS20700;Dbxref=Genbank:WP_004848570.1;Name=WP_004848570.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225689.1;locus_tag=PHA56_RS20700;product=RamA family antibiotic efflux transcriptional regulator;protein_id=WP_004848570.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4372550 4373650 . - . ID=gene-PHA56_RS20705;Name=PHA56_RS20705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS20705;old_locus_tag=PHA56_20705 NZ_CP116214.1 Protein Homology CDS 4372550 4373650 . - 0 ID=cds-WP_109241137.1;Parent=gene-PHA56_RS20705;Dbxref=Genbank:WP_109241137.1;Name=WP_109241137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002893029.1;locus_tag=PHA56_RS20705;product=MBL fold metallo-hydrolase;protein_id=WP_109241137.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4373841 4374422 . + . ID=gene-PHA56_RS20710;Name=PHA56_RS20710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS20710;old_locus_tag=PHA56_20710 NZ_CP116214.1 Protein Homology CDS 4373841 4374422 . + 0 ID=cds-WP_004848568.1;Parent=gene-PHA56_RS20710;Dbxref=Genbank:WP_004848568.1;Name=WP_004848568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004176968.1;locus_tag=PHA56_RS20710;product=TetR/AcrR family transcriptional regulator;protein_id=WP_004848568.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4374422 4374790 . + . ID=gene-PHA56_RS20715;Name=PHA56_RS20715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS20715;old_locus_tag=PHA56_20715 NZ_CP116214.1 Protein Homology CDS 4374422 4374790 . + 0 ID=cds-WP_032694574.1;Parent=gene-PHA56_RS20715;Dbxref=Genbank:WP_032694574.1;Name=WP_032694574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004848567.1;locus_tag=PHA56_RS20715;product=MmcQ/YjbR family DNA-binding protein;protein_id=WP_032694574.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4374909 4375562 . + . ID=gene-PHA56_RS20720;Name=nfsB;gbkey=Gene;gene=nfsB;gene_biotype=protein_coding;locus_tag=PHA56_RS20720;old_locus_tag=PHA56_20720 NZ_CP116214.1 Protein Homology CDS 4374909 4375562 . + 0 ID=cds-WP_032719567.1;Parent=gene-PHA56_RS20720;Dbxref=Genbank:WP_032719567.1;Name=WP_032719567.1;Ontology_term=GO:0016491;gbkey=CDS;gene=nfsB;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225685.1;locus_tag=PHA56_RS20720;product=oxygen-insensitive NAD(P)H nitroreductase;protein_id=WP_032719567.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4375721 4376563 . - . ID=gene-PHA56_RS20725;Name=PHA56_RS20725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS20725;old_locus_tag=PHA56_20725 NZ_CP116214.1 Protein Homology CDS 4375721 4376563 . - 0 ID=cds-WP_119834446.1;Parent=gene-PHA56_RS20725;Dbxref=Genbank:WP_119834446.1;Name=WP_119834446.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014837743.1;locus_tag=PHA56_RS20725;product=A24 family peptidase;protein_id=WP_119834446.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4376625 4377365 . - . ID=gene-PHA56_RS20730;Name=PHA56_RS20730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS20730;old_locus_tag=PHA56_20730 NZ_CP116214.1 Protein Homology CDS 4376625 4377365 . - 0 ID=cds-WP_119834447.1;Parent=gene-PHA56_RS20730;Dbxref=Genbank:WP_119834447.1;Name=WP_119834447.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013376.2;locus_tag=PHA56_RS20730;product=type II secretion system protein N;protein_id=WP_119834447.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4377355 4377849 . - . ID=gene-PHA56_RS20735;Name=PHA56_RS20735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS20735;old_locus_tag=PHA56_20735 NZ_CP116214.1 Protein Homology CDS 4377355 4377849 . - 0 ID=cds-WP_014228304.1;Parent=gene-PHA56_RS20735;Dbxref=Genbank:WP_014228304.1;Name=WP_014228304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014837741.1;locus_tag=PHA56_RS20735;product=type II secretion system protein M;protein_id=WP_014228304.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4377836 4379041 . - . ID=gene-PHA56_RS20740;Name=gspL;gbkey=Gene;gene=gspL;gene_biotype=protein_coding;locus_tag=PHA56_RS20740;old_locus_tag=PHA56_20740 NZ_CP116214.1 Protein Homology CDS 4377836 4379041 . - 0 ID=cds-WP_119834448.1;Parent=gene-PHA56_RS20740;Dbxref=Genbank:WP_119834448.1;Name=WP_119834448.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspL;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014228303.1;locus_tag=PHA56_RS20740;product=type II secretion system protein GspL;protein_id=WP_119834448.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4379041 4380027 . - . ID=gene-PHA56_RS20745;Name=gspK;gbkey=Gene;gene=gspK;gene_biotype=protein_coding;locus_tag=PHA56_RS20745;old_locus_tag=PHA56_20745 NZ_CP116214.1 Protein Homology CDS 4379041 4380027 . - 0 ID=cds-WP_042944535.1;Parent=gene-PHA56_RS20745;Dbxref=Genbank:WP_042944535.1;Name=WP_042944535.1;Ontology_term=GO:0009306,GO:0016020;gbkey=CDS;gene=gspK;go_component=membrane|0016020||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014228302.1;locus_tag=PHA56_RS20745;product=type II secretion system minor pseudopilin GspK;protein_id=WP_042944535.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4380024 4380623 . - . ID=gene-PHA56_RS20750;Name=gspJ;gbkey=Gene;gene=gspJ;gene_biotype=protein_coding;locus_tag=PHA56_RS20750;old_locus_tag=PHA56_20750 NZ_CP116214.1 Protein Homology CDS 4380024 4380623 . - 0 ID=cds-WP_014228301.1;Parent=gene-PHA56_RS20750;Dbxref=Genbank:WP_014228301.1;Name=WP_014228301.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspJ;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014228301.1;locus_tag=PHA56_RS20750;product=type II secretion system minor pseudopilin GspJ;protein_id=WP_014228301.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4380620 4380985 . - . ID=gene-PHA56_RS20755;Name=gspI;gbkey=Gene;gene=gspI;gene_biotype=protein_coding;locus_tag=PHA56_RS20755;old_locus_tag=PHA56_20755 NZ_CP116214.1 Protein Homology CDS 4380620 4380985 . - 0 ID=cds-WP_119834449.1;Parent=gene-PHA56_RS20755;Dbxref=Genbank:WP_119834449.1;Name=WP_119834449.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspI;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014228300.1;locus_tag=PHA56_RS20755;product=type II secretion system minor pseudopilin GspI;protein_id=WP_119834449.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4380982 4381533 . - . ID=gene-PHA56_RS20760;Name=gspH;gbkey=Gene;gene=gspH;gene_biotype=protein_coding;locus_tag=PHA56_RS20760;old_locus_tag=PHA56_20760 NZ_CP116214.1 Protein Homology CDS 4380982 4381533 . - 0 ID=cds-WP_119834450.1;Parent=gene-PHA56_RS20760;Dbxref=Genbank:WP_119834450.1;Name=WP_119834450.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspH;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014228299.1;locus_tag=PHA56_RS20760;product=type II secretion system minor pseudopilin GspH;protein_id=WP_119834450.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4381533 4381961 . - . ID=gene-PHA56_RS20765;Name=gspG;gbkey=Gene;gene=gspG;gene_biotype=protein_coding;locus_tag=PHA56_RS20765;old_locus_tag=PHA56_20765 NZ_CP116214.1 Protein Homology CDS 4381533 4381961 . - 0 ID=cds-WP_042944533.1;Parent=gene-PHA56_RS20765;Dbxref=Genbank:WP_042944533.1;Name=WP_042944533.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspG;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014228298.1;locus_tag=PHA56_RS20765;product=type II secretion system major pseudopilin GspG;protein_id=WP_042944533.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4381991 4383211 . - . ID=gene-PHA56_RS20770;Name=gspF;gbkey=Gene;gene=gspF;gene_biotype=protein_coding;locus_tag=PHA56_RS20770;old_locus_tag=PHA56_20770 NZ_CP116214.1 Protein Homology CDS 4381991 4383211 . - 0 ID=cds-WP_119834451.1;Parent=gene-PHA56_RS20770;Dbxref=Genbank:WP_119834451.1;Name=WP_119834451.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspF;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014228297.1;locus_tag=PHA56_RS20770;product=type II secretion system inner membrane protein GspF;protein_id=WP_119834451.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4383216 4384721 . - . ID=gene-PHA56_RS20775;Name=gspE;gbkey=Gene;gene=gspE;gene_biotype=protein_coding;locus_tag=PHA56_RS20775;old_locus_tag=PHA56_20775 NZ_CP116214.1 Protein Homology CDS 4383216 4384721 . - 0 ID=cds-WP_014228296.1;Parent=gene-PHA56_RS20775;Dbxref=Genbank:WP_014228296.1;Name=WP_014228296.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspE;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014228296.1;locus_tag=PHA56_RS20775;product=type II secretion system ATPase GspE;protein_id=WP_014228296.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4384721 4386667 . - . ID=gene-PHA56_RS20780;Name=gspD;gbkey=Gene;gene=gspD;gene_biotype=protein_coding;locus_tag=PHA56_RS20780;old_locus_tag=PHA56_20780 NZ_CP116214.1 Protein Homology CDS 4384721 4386667 . - 0 ID=cds-WP_224373472.1;Parent=gene-PHA56_RS20780;Dbxref=Genbank:WP_224373472.1;Name=WP_224373472.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspD;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014228295.1;locus_tag=PHA56_RS20780;product=type II secretion system secretin GspD;protein_id=WP_224373472.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4386701 4387558 . - . ID=gene-PHA56_RS20785;Name=gspC;gbkey=Gene;gene=gspC;gene_biotype=protein_coding;locus_tag=PHA56_RS20785;old_locus_tag=PHA56_20785 NZ_CP116214.1 Protein Homology CDS 4386701 4387558 . - 0 ID=cds-WP_119834453.1;Parent=gene-PHA56_RS20785;Dbxref=Genbank:WP_119834453.1;Name=WP_119834453.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspC;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: protein motif:HMM:TIGR01713.1;locus_tag=PHA56_RS20785;product=type II secretion system protein GspC;protein_id=WP_119834453.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4387839 4390526 . - . ID=gene-PHA56_RS20790;Name=PHA56_RS20790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS20790;old_locus_tag=PHA56_20790 NZ_CP116214.1 Protein Homology CDS 4387839 4390526 . - 0 ID=cds-WP_119834454.1;Parent=gene-PHA56_RS20790;Dbxref=Genbank:WP_119834454.1;Name=WP_119834454.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014228292.1;locus_tag=PHA56_RS20790;product=glycoside hydrolase family 32 protein;protein_id=WP_119834454.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4390658 4391506 . - . ID=gene-PHA56_RS20795;Name=PHA56_RS20795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS20795;old_locus_tag=PHA56_20795 NZ_CP116214.1 Protein Homology CDS 4390658 4391506 . - 0 ID=cds-WP_014228291.1;Parent=gene-PHA56_RS20795;Dbxref=Genbank:WP_014228291.1;Name=WP_014228291.1;Ontology_term=GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014228291.1;locus_tag=PHA56_RS20795;product=mannose/fructose/sorbose PTS transporter subunit IID;protein_id=WP_014228291.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4391518 4392318 . - . ID=gene-PHA56_RS20800;Name=PHA56_RS20800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS20800;old_locus_tag=PHA56_20800 NZ_CP116214.1 Protein Homology CDS 4391518 4392318 . - 0 ID=cds-WP_014228290.1;Parent=gene-PHA56_RS20800;Dbxref=Genbank:WP_014228290.1;Name=WP_014228290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014228290.1;locus_tag=PHA56_RS20800;product=PTS mannose/fructose/sorbose transporter subunit IIC;protein_id=WP_014228290.1;transl_table=11 NZ_CP116214.1 RefSeq pseudogene 4392330 4393239 . - . ID=gene-PHA56_RS20805;Name=PHA56_RS20805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS20805;old_locus_tag=PHA56_20805;pseudo=true NZ_CP116214.1 Protein Homology CDS 4392330 4393239 . - 0 ID=cds-PHA56_RS20805;Parent=gene-PHA56_RS20805;Note=frameshifted;Ontology_term=GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012737897.1;locus_tag=PHA56_RS20805;product=mannose/fructose/sorbose PTS transporter subunit IIB;pseudo=true;transl_table=11 NZ_CP116214.1 RefSeq gene 4393672 4394067 . + . ID=gene-PHA56_RS20810;Name=gspS;gbkey=Gene;gene=gspS;gene_biotype=protein_coding;locus_tag=PHA56_RS20810;old_locus_tag=PHA56_20810 NZ_CP116214.1 Protein Homology CDS 4393672 4394067 . + 0 ID=cds-WP_042934299.1;Parent=gene-PHA56_RS20810;Dbxref=Genbank:WP_042934299.1;Name=WP_042934299.1;gbkey=CDS;gene=gspS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014227983.1;locus_tag=PHA56_RS20810;product=type II secretion system pilot lipoprotein GspS;protein_id=WP_042934299.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4394151 4397027 . - . ID=gene-PHA56_RS20815;Name=PHA56_RS20815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS20815;old_locus_tag=PHA56_20815 NZ_CP116214.1 Protein Homology CDS 4394151 4397027 . - 0 ID=cds-WP_119834455.1;Parent=gene-PHA56_RS20815;Dbxref=Genbank:WP_119834455.1;Name=WP_119834455.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014228286.1;locus_tag=PHA56_RS20815;product=sigma-54-dependent transcriptional regulator;protein_id=WP_119834455.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4397590 4398453 . - . ID=gene-PHA56_RS20820;Name=PHA56_RS20820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS20820;old_locus_tag=PHA56_20820 NZ_CP116214.1 Protein Homology CDS 4397590 4398453 . - 0 ID=cds-WP_042944525.1;Parent=gene-PHA56_RS20820;Dbxref=Genbank:WP_042944525.1;Name=WP_042944525.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014228285.1;locus_tag=PHA56_RS20820;product=helix-turn-helix transcriptional regulator;protein_id=WP_042944525.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4398563 4399990 . + . ID=gene-PHA56_RS20825;Name=PHA56_RS20825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS20825;old_locus_tag=PHA56_20825 NZ_CP116214.1 Protein Homology CDS 4398563 4399990 . + 0 ID=cds-WP_119834456.1;Parent=gene-PHA56_RS20825;Dbxref=Genbank:WP_119834456.1;Name=WP_119834456.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004099971.1;locus_tag=PHA56_RS20825;product=MFS transporter;protein_id=WP_119834456.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4400068 4401312 . + . ID=gene-PHA56_RS20830;Name=PHA56_RS20830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS20830;old_locus_tag=PHA56_20830 NZ_CP116214.1 Protein Homology CDS 4400068 4401312 . + 0 ID=cds-WP_009654157.1;Parent=gene-PHA56_RS20830;Dbxref=Genbank:WP_009654157.1;Name=WP_009654157.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225673.1;locus_tag=PHA56_RS20830;product=mechanosensitive ion channel family protein;protein_id=WP_009654157.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4401318 4402298 . - . ID=gene-PHA56_RS20835;Name=PHA56_RS20835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS20835;old_locus_tag=PHA56_20835 NZ_CP116214.1 Protein Homology CDS 4401318 4402298 . - 0 ID=cds-WP_014228283.1;Parent=gene-PHA56_RS20835;Dbxref=Genbank:WP_014228283.1;Name=WP_014228283.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004135342.1;locus_tag=PHA56_RS20835;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_014228283.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4402510 4402908 . + . ID=gene-PHA56_RS20840;Name=PHA56_RS20840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS20840;old_locus_tag=PHA56_20840 NZ_CP116214.1 Protein Homology CDS 4402510 4402908 . + 0 ID=cds-WP_041165303.1;Parent=gene-PHA56_RS20840;Dbxref=Genbank:WP_041165303.1;Name=WP_041165303.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009654148.1;locus_tag=PHA56_RS20840;product=NUDIX domain-containing protein;protein_id=WP_041165303.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4403590 4404207 . + . ID=gene-PHA56_RS20845;Name=PHA56_RS20845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS20845;old_locus_tag=PHA56_20845 NZ_CP116214.1 Protein Homology CDS 4403590 4404207 . + 0 ID=cds-WP_014837731.1;Parent=gene-PHA56_RS20845;Dbxref=Genbank:WP_014837731.1;Name=WP_014837731.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF012422.2;locus_tag=PHA56_RS20845;product=LuxR C-terminal-related transcriptional regulator;protein_id=WP_014837731.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4404278 4404856 . + . ID=gene-PHA56_RS20850;Name=PHA56_RS20850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS20850;old_locus_tag=PHA56_20850 NZ_CP116214.1 Protein Homology CDS 4404278 4404856 . + 0 ID=cds-WP_014228280.1;Parent=gene-PHA56_RS20850;Dbxref=Genbank:WP_014228280.1;Name=WP_014228280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225668.1;locus_tag=PHA56_RS20850;product=common pilus major fimbrillin subunit EcpA;protein_id=WP_014228280.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4404921 4405598 . + . ID=gene-PHA56_RS20855;Name=PHA56_RS20855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS20855;old_locus_tag=PHA56_20855 NZ_CP116214.1 Protein Homology CDS 4404921 4405598 . + 0 ID=cds-WP_119834457.1;Parent=gene-PHA56_RS20855;Dbxref=Genbank:WP_119834457.1;Name=WP_119834457.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225667.1;locus_tag=PHA56_RS20855;product=hypothetical protein;protein_id=WP_119834457.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4405607 4408144 . + . ID=gene-PHA56_RS20860;Name=PHA56_RS20860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS20860;old_locus_tag=PHA56_20860 NZ_CP116214.1 Protein Homology CDS 4405607 4408144 . + 0 ID=cds-WP_032694584.1;Parent=gene-PHA56_RS20860;Dbxref=Genbank:WP_032694584.1;Name=WP_032694584.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225666.1;locus_tag=PHA56_RS20860;product=TcfC E-set like domain-containing protein;protein_id=WP_032694584.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4408134 4409753 . + . ID=gene-PHA56_RS20865;Name=PHA56_RS20865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS20865;old_locus_tag=PHA56_20865 NZ_CP116214.1 Protein Homology CDS 4408134 4409753 . + 0 ID=cds-WP_014228277.1;Parent=gene-PHA56_RS20865;Dbxref=Genbank:WP_014228277.1;Name=WP_014228277.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225665.1;locus_tag=PHA56_RS20865;product=hypothetical protein;protein_id=WP_014228277.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4409750 4410433 . + . ID=gene-PHA56_RS20870;Name=PHA56_RS20870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS20870;old_locus_tag=PHA56_20870 NZ_CP116214.1 Protein Homology CDS 4409750 4410433 . + 0 ID=cds-WP_032694585.1;Parent=gene-PHA56_RS20870;Dbxref=Genbank:WP_032694585.1;Name=WP_032694585.1;Ontology_term=GO:0071555,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225664.1;locus_tag=PHA56_RS20870;product=fimbria/pilus periplasmic chaperone;protein_id=WP_032694585.1;transl_table=11 NZ_CP116214.1 RefSeq pseudogene 4410440 4411139 . - . ID=gene-PHA56_RS20875;Name=PHA56_RS20875;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS20875;old_locus_tag=PHA56_20875;pseudo=true NZ_CP116214.1 Protein Homology CDS 4410440 4411139 . - 0 ID=cds-PHA56_RS20875;Parent=gene-PHA56_RS20875;Note=frameshifted;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225663.1;locus_tag=PHA56_RS20875;product=LuxR C-terminal-related transcriptional regulator;pseudo=true;transl_table=11 NZ_CP116214.1 RefSeq gene 4411226 4412251 . + . ID=gene-PHA56_RS20880;Name=PHA56_RS20880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS20880;old_locus_tag=PHA56_20880 NZ_CP116214.1 Protein Homology CDS 4411226 4412251 . + 0 ID=cds-WP_040118421.1-4;Parent=gene-PHA56_RS20880;Dbxref=Genbank:WP_040118421.1;Name=WP_040118421.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011144720.1;locus_tag=PHA56_RS20880;product=IS630 family transposase;protein_id=WP_040118421.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4412504 4413412 . - . ID=gene-PHA56_RS20885;Name=PHA56_RS20885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS20885;old_locus_tag=PHA56_20885 NZ_CP116214.1 Protein Homology CDS 4412504 4413412 . - 0 ID=cds-WP_119834458.1;Parent=gene-PHA56_RS20885;Dbxref=Genbank:WP_119834458.1;Name=WP_119834458.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014837728.1;locus_tag=PHA56_RS20885;product=LysR family transcriptional regulator;protein_id=WP_119834458.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4413593 4414342 . + . ID=gene-PHA56_RS20890;Name=PHA56_RS20890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS20890;old_locus_tag=PHA56_20890 NZ_CP116214.1 Protein Homology CDS 4413593 4414342 . + 0 ID=cds-WP_014837727.1;Parent=gene-PHA56_RS20890;Dbxref=Genbank:WP_014837727.1;Name=WP_014837727.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226368.1;locus_tag=PHA56_RS20890;product=SDR family oxidoreductase;protein_id=WP_014837727.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4414470 4414886 . + . ID=gene-PHA56_RS20895;Name=PHA56_RS20895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS20895;old_locus_tag=PHA56_20895 NZ_CP116214.1 Protein Homology CDS 4414470 4414886 . + 0 ID=cds-WP_014228272.1;Parent=gene-PHA56_RS20895;Dbxref=Genbank:WP_014228272.1;Name=WP_014228272.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225661.1;locus_tag=PHA56_RS20895;product=Exc2 family lipoprotein;protein_id=WP_014228272.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4414924 4416075 . - . ID=gene-PHA56_RS20900;Name=PHA56_RS20900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS20900;old_locus_tag=PHA56_20900 NZ_CP116214.1 Protein Homology CDS 4414924 4416075 . - 0 ID=cds-WP_014837726.1;Parent=gene-PHA56_RS20900;Dbxref=Genbank:WP_014837726.1;Name=WP_014837726.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225660.1;locus_tag=PHA56_RS20900;product=Gfo/Idh/MocA family oxidoreductase;protein_id=WP_014837726.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4416072 4417100 . - . ID=gene-PHA56_RS20905;Name=PHA56_RS20905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS20905;old_locus_tag=PHA56_20905 NZ_CP116214.1 Protein Homology CDS 4416072 4417100 . - 0 ID=cds-WP_014837725.1;Parent=gene-PHA56_RS20905;Dbxref=Genbank:WP_014837725.1;Name=WP_014837725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004099952.1;locus_tag=PHA56_RS20905;product=sugar phosphate isomerase/epimerase;protein_id=WP_014837725.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4417117 4418358 . - . ID=gene-PHA56_RS20910;Name=PHA56_RS20910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS20910;old_locus_tag=PHA56_20910 NZ_CP116214.1 Protein Homology CDS 4417117 4418358 . - 0 ID=cds-WP_014228269.1;Parent=gene-PHA56_RS20910;Dbxref=Genbank:WP_014228269.1;Name=WP_014228269.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014228269.1;locus_tag=PHA56_RS20910;product=MFS transporter;protein_id=WP_014228269.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4418509 4419885 . - . ID=gene-PHA56_RS20915;Name=pheP;gbkey=Gene;gene=pheP;gene_biotype=protein_coding;locus_tag=PHA56_RS20915;old_locus_tag=PHA56_20915 NZ_CP116214.1 Protein Homology CDS 4418509 4419885 . - 0 ID=cds-WP_014228268.1;Parent=gene-PHA56_RS20915;Dbxref=Genbank:WP_014228268.1;Name=WP_014228268.1;Ontology_term=GO:0006865;gbkey=CDS;gene=pheP;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225657.1;locus_tag=PHA56_RS20915;product=phenylalanine transporter;protein_id=WP_014228268.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4420153 4422390 . - . ID=gene-PHA56_RS20920;Name=PHA56_RS20920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS20920;old_locus_tag=PHA56_20920 NZ_CP116214.1 Protein Homology CDS 4420153 4422390 . - 0 ID=cds-WP_077255166.1;Parent=gene-PHA56_RS20920;Dbxref=Genbank:WP_077255166.1;Name=WP_077255166.1;Ontology_term=GO:0015891,GO:0015343,GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;go_function=siderophore-iron transmembrane transporter activity|0015343||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014837724.1;locus_tag=PHA56_RS20920;product=TonB-dependent siderophore receptor;protein_id=WP_077255166.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4422733 4423686 . - . ID=gene-PHA56_RS20925;Name=PHA56_RS20925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS20925;old_locus_tag=PHA56_20925 NZ_CP116214.1 Protein Homology CDS 4422733 4423686 . - 0 ID=cds-WP_014228266.1;Parent=gene-PHA56_RS20925;Dbxref=Genbank:WP_014228266.1;Name=WP_014228266.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225642.1;locus_tag=PHA56_RS20925;product=aldo/keto reductase;protein_id=WP_014228266.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4423818 4424594 . - . ID=gene-PHA56_RS20930;Name=PHA56_RS20930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS20930;old_locus_tag=PHA56_20930 NZ_CP116214.1 Protein Homology CDS 4423818 4424594 . - 0 ID=cds-WP_004848539.1;Parent=gene-PHA56_RS20930;Dbxref=Genbank:WP_004848539.1;Name=WP_004848539.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225641.1;locus_tag=PHA56_RS20930;product=ABC transporter substrate-binding protein;protein_id=WP_004848539.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4424614 4425747 . - . ID=gene-PHA56_RS20935;Name=PHA56_RS20935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS20935;old_locus_tag=PHA56_20935 NZ_CP116214.1 Protein Homology CDS 4424614 4425747 . - 0 ID=cds-WP_271292933.1;Parent=gene-PHA56_RS20935;Dbxref=Genbank:WP_271292933.1;Name=WP_271292933.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225640.1;locus_tag=PHA56_RS20935;product=M20 family metallopeptidase;protein_id=WP_271292933.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4425773 4426470 . - . ID=gene-PHA56_RS20940;Name=PHA56_RS20940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS20940;old_locus_tag=PHA56_20940 NZ_CP116214.1 Protein Homology CDS 4426221 4426470 . - 0 ID=cds-WP_223335778.1-3;Parent=gene-PHA56_RS20940;Dbxref=Genbank:WP_223335778.1;Name=WP_223335778.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558260.1;locus_tag=PHA56_RS20940;product=IS1 family transposase;protein_id=WP_223335778.1;transl_table=11 NZ_CP116214.1 Protein Homology CDS 4425773 4426221 . - 2 ID=cds-WP_223335778.1-3;Parent=gene-PHA56_RS20940;Dbxref=Genbank:WP_223335778.1;Name=WP_223335778.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558260.1;locus_tag=PHA56_RS20940;product=IS1 family transposase;protein_id=WP_223335778.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4427011 4427493 . - . ID=gene-PHA56_RS20945;Name=PHA56_RS20945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS20945;old_locus_tag=PHA56_20945 NZ_CP116214.1 Protein Homology CDS 4427011 4427493 . - 0 ID=cds-WP_014228264.1;Parent=gene-PHA56_RS20945;Dbxref=Genbank:WP_014228264.1;Name=WP_014228264.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002892701.1;locus_tag=PHA56_RS20945;product=RcnB family protein;protein_id=WP_014228264.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4427802 4428194 . - . ID=gene-PHA56_RS20950;Name=PHA56_RS20950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS20950;old_locus_tag=PHA56_20950 NZ_CP116214.1 Protein Homology CDS 4427802 4428194 . - 0 ID=cds-WP_004130158.1;Parent=gene-PHA56_RS20950;Dbxref=Genbank:WP_004130158.1;Name=WP_004130158.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225636.1;locus_tag=PHA56_RS20950;product=hypothetical protein;protein_id=WP_004130158.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4428469 4429587 . + . ID=gene-PHA56_RS20955;Name=PHA56_RS20955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS20955;old_locus_tag=PHA56_20955 NZ_CP116214.1 Protein Homology CDS 4428469 4429587 . + 0 ID=cds-WP_009654147.1;Parent=gene-PHA56_RS20955;Dbxref=Genbank:WP_009654147.1;Name=WP_009654147.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225634.1;locus_tag=PHA56_RS20955;product=ABC transporter substrate-binding protein;protein_id=WP_009654147.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4429594 4430676 . + . ID=gene-PHA56_RS20960;Name=PHA56_RS20960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS20960;old_locus_tag=PHA56_20960 NZ_CP116214.1 Protein Homology CDS 4429594 4430676 . + 0 ID=cds-WP_014228263.1;Parent=gene-PHA56_RS20960;Dbxref=Genbank:WP_014228263.1;Name=WP_014228263.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014837720.1;locus_tag=PHA56_RS20960;product=iron ABC transporter permease;protein_id=WP_014228263.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4430673 4431464 . + . ID=gene-PHA56_RS20965;Name=PHA56_RS20965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS20965;old_locus_tag=PHA56_20965 NZ_CP116214.1 Protein Homology CDS 4430673 4431464 . + 0 ID=cds-WP_163585730.1;Parent=gene-PHA56_RS20965;Dbxref=Genbank:WP_163585730.1;Name=WP_163585730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014228262.1;locus_tag=PHA56_RS20965;product=ABC transporter ATP-binding protein;protein_id=WP_163585730.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4431746 4432669 . + . ID=gene-PHA56_RS20970;Name=PHA56_RS20970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS20970;old_locus_tag=PHA56_20970 NZ_CP116214.1 Protein Homology CDS 4431746 4432669 . + 0 ID=cds-WP_014228261.1;Parent=gene-PHA56_RS20970;Dbxref=Genbank:WP_014228261.1;Name=WP_014228261.1;Ontology_term=GO:0016301;gbkey=CDS;go_function=kinase activity|0016301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000992322.1;locus_tag=PHA56_RS20970;product=aminoimidazole riboside kinase;protein_id=WP_014228261.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4432834 4434351 . + . ID=gene-PHA56_RS20975;Name=PHA56_RS20975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS20975;old_locus_tag=PHA56_20975 NZ_CP116214.1 Protein Homology CDS 4432834 4434351 . + 0 ID=cds-WP_014228260.1;Parent=gene-PHA56_RS20975;Dbxref=Genbank:WP_014228260.1;Name=WP_014228260.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225626.1;locus_tag=PHA56_RS20975;product=carbohydrate porin;protein_id=WP_014228260.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4434489 4435859 . + . ID=gene-PHA56_RS20980;Name=PHA56_RS20980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS20980;old_locus_tag=PHA56_20980 NZ_CP116214.1 Protein Homology CDS 4434489 4435859 . + 0 ID=cds-WP_014837718.1;Parent=gene-PHA56_RS20980;Dbxref=Genbank:WP_014837718.1;Name=WP_014837718.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225625.1;locus_tag=PHA56_RS20980;product=sucrose-specific PTS transporter subunit IIBC;protein_id=WP_014837718.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4435859 4437259 . + . ID=gene-PHA56_RS20985;Name=PHA56_RS20985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS20985;old_locus_tag=PHA56_20985 NZ_CP116214.1 Protein Homology CDS 4435859 4437259 . + 0 ID=cds-WP_014837717.1;Parent=gene-PHA56_RS20985;Dbxref=Genbank:WP_014837717.1;Name=WP_014837717.1;Ontology_term=GO:0005975,GO:0004564;gbkey=CDS;go_function=beta-fructofuranosidase activity|0004564||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225624.1;locus_tag=PHA56_RS20985;product=sucrose-6-phosphate hydrolase;protein_id=WP_014837717.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4437290 4438294 . + . ID=gene-PHA56_RS20990;Name=PHA56_RS20990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS20990;old_locus_tag=PHA56_20990 NZ_CP116214.1 Protein Homology CDS 4437290 4438294 . + 0 ID=cds-WP_119834460.1;Parent=gene-PHA56_RS20990;Dbxref=Genbank:WP_119834460.1;Name=WP_119834460.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004859026.1;locus_tag=PHA56_RS20990;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_119834460.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4438441 4438698 . - . ID=gene-PHA56_RS20995;Name=PHA56_RS20995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS20995;old_locus_tag=PHA56_20995 NZ_CP116214.1 GeneMarkS-2+ CDS 4438441 4438698 . - 0 ID=cds-WP_038424184.1;Parent=gene-PHA56_RS20995;Dbxref=Genbank:WP_038424184.1;Name=WP_038424184.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PHA56_RS20995;product=hypothetical protein;protein_id=WP_038424184.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4438685 4439023 . - . ID=gene-PHA56_RS21000;Name=PHA56_RS21000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS21000;old_locus_tag=PHA56_21000 NZ_CP116214.1 Protein Homology CDS 4438685 4439023 . - 0 ID=cds-WP_038424183.1;Parent=gene-PHA56_RS21000;Dbxref=Genbank:WP_038424183.1;Name=WP_038424183.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003863017.1;locus_tag=PHA56_RS21000;product=helix-turn-helix transcriptional regulator;protein_id=WP_038424183.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4439173 4440012 . - . ID=gene-PHA56_RS21005;Name=PHA56_RS21005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS21005;old_locus_tag=PHA56_21005 NZ_CP116214.1 Protein Homology CDS 4439173 4440012 . - 0 ID=cds-WP_014837715.1;Parent=gene-PHA56_RS21005;Dbxref=Genbank:WP_014837715.1;Name=WP_014837715.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014228254.1;locus_tag=PHA56_RS21005;product=PRD domain-containing protein;protein_id=WP_014837715.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4440009 4441433 . - . ID=gene-PHA56_RS21010;Name=PHA56_RS21010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS21010;old_locus_tag=PHA56_21010 NZ_CP116214.1 Protein Homology CDS 4440009 4441433 . - 0 ID=cds-WP_014837714.1;Parent=gene-PHA56_RS21010;Dbxref=Genbank:WP_014837714.1;Name=WP_014837714.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004099893.1;locus_tag=PHA56_RS21010;product=glycoside hydrolase family 1 protein;protein_id=WP_014837714.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4441430 4443310 . - . ID=gene-PHA56_RS21015;Name=PHA56_RS21015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS21015;old_locus_tag=PHA56_21015 NZ_CP116214.1 Protein Homology CDS 4441430 4443310 . - 0 ID=cds-WP_014837713.1;Parent=gene-PHA56_RS21015;Dbxref=Genbank:WP_014837713.1;Name=WP_014837713.1;Ontology_term=GO:0009401,GO:0015759,GO:0015573;gbkey=CDS;go_function=beta-glucoside transmembrane transporter activity|0015573||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,beta-glucoside transport|0015759||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014837713.1;locus_tag=PHA56_RS21015;product=beta-glucoside-specific PTS transporter subunit IIABC;protein_id=WP_014837713.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4443564 4444586 . - . ID=gene-PHA56_RS21020;Name=PHA56_RS21020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS21020;old_locus_tag=PHA56_21020 NZ_CP116214.1 Protein Homology CDS 4443564 4444586 . - 0 ID=cds-WP_170873311.1;Parent=gene-PHA56_RS21020;Dbxref=Genbank:WP_170873311.1;Name=WP_170873311.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225620.1;locus_tag=PHA56_RS21020;product=ABC transporter permease;protein_id=WP_170873311.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4444606 4446090 . - . ID=gene-PHA56_RS21025;Name=PHA56_RS21025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS21025;old_locus_tag=PHA56_21025 NZ_CP116214.1 Protein Homology CDS 4444606 4446090 . - 0 ID=cds-WP_004848509.1;Parent=gene-PHA56_RS21025;Dbxref=Genbank:WP_004848509.1;Name=WP_004848509.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225619.1;locus_tag=PHA56_RS21025;product=sugar ABC transporter ATP-binding protein;protein_id=WP_004848509.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4446115 4447038 . - . ID=gene-PHA56_RS21030;Name=PHA56_RS21030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS21030;old_locus_tag=PHA56_21030 NZ_CP116214.1 Protein Homology CDS 4446115 4447038 . - 0 ID=cds-WP_004848507.1;Parent=gene-PHA56_RS21030;Dbxref=Genbank:WP_004848507.1;Name=WP_004848507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225618.1;locus_tag=PHA56_RS21030;product=sugar ABC transporter substrate-binding protein;protein_id=WP_004848507.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4447488 4448507 . - . ID=gene-PHA56_RS21035;Name=PHA56_RS21035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS21035;old_locus_tag=PHA56_21035 NZ_CP116214.1 Protein Homology CDS 4447488 4448507 . - 0 ID=cds-WP_014228250.1;Parent=gene-PHA56_RS21035;Dbxref=Genbank:WP_014228250.1;Name=WP_014228250.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004210175.1;locus_tag=PHA56_RS21035;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_014228250.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4448612 4449619 . + . ID=gene-PHA56_RS21040;Name=PHA56_RS21040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS21040;old_locus_tag=PHA56_21040 NZ_CP116214.1 Protein Homology CDS 4448612 4449619 . + 0 ID=cds-WP_014837710.1;Parent=gene-PHA56_RS21040;Dbxref=Genbank:WP_014837710.1;Name=WP_014837710.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004137837.1;locus_tag=PHA56_RS21040;product=Gfo/Idh/MocA family oxidoreductase;protein_id=WP_014837710.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4449663 4450694 . - . ID=gene-PHA56_RS21045;Name=PHA56_RS21045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS21045;old_locus_tag=PHA56_21045 NZ_CP116214.1 Protein Homology CDS 4449663 4450694 . - 0 ID=cds-WP_038424180.1;Parent=gene-PHA56_RS21045;Dbxref=Genbank:WP_038424180.1;Name=WP_038424180.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225615.1;locus_tag=PHA56_RS21045;product=Gfo/Idh/MocA family oxidoreductase;protein_id=WP_038424180.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4450857 4451732 . + . ID=gene-PHA56_RS21050;Name=PHA56_RS21050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS21050;old_locus_tag=PHA56_21050 NZ_CP116214.1 Protein Homology CDS 4450857 4451732 . + 0 ID=cds-WP_014228247.1;Parent=gene-PHA56_RS21050;Dbxref=Genbank:WP_014228247.1;Name=WP_014228247.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004137840.1;locus_tag=PHA56_RS21050;product=extended-spectrum class A beta-lactamase OXY-1-1;protein_id=WP_014228247.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4452001 4452345 . - . ID=gene-PHA56_RS21055;Name=PHA56_RS21055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS21055;old_locus_tag=PHA56_21055 NZ_CP116214.1 Protein Homology CDS 4452001 4452345 . - 0 ID=cds-WP_014837707.1;Parent=gene-PHA56_RS21055;Dbxref=Genbank:WP_014837707.1;Name=WP_014837707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004848497.1;locus_tag=PHA56_RS21055;product=hypothetical protein;protein_id=WP_014837707.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4452567 4454084 . - . ID=gene-PHA56_RS21060;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=PHA56_RS21060;old_locus_tag=PHA56_21060 NZ_CP116214.1 Protein Homology CDS 4452567 4454084 . - 0 ID=cds-WP_004848495.1;Parent=gene-PHA56_RS21060;Dbxref=Genbank:WP_004848495.1;Name=WP_004848495.1;Ontology_term=GO:0006430,GO:0004824,GO:0005737;gbkey=CDS;gene=lysS;go_component=cytoplasm|0005737||IEA;go_function=lysine-tRNA ligase activity|0004824||IEA;go_process=lysyl-tRNA aminoacylation|0006430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001740376.1;locus_tag=PHA56_RS21060;product=lysine--tRNA ligase;protein_id=WP_004848495.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4454426 4455901 . - . ID=gene-PHA56_RS21065;Name=dtpD;gbkey=Gene;gene=dtpD;gene_biotype=protein_coding;locus_tag=PHA56_RS21065;old_locus_tag=PHA56_21065 NZ_CP116214.1 Protein Homology CDS 4454426 4455901 . - 0 ID=cds-WP_014228245.1;Parent=gene-PHA56_RS21065;Dbxref=Genbank:WP_014228245.1;Name=WP_014228245.1;Ontology_term=GO:0006857,GO:0055085,GO:1904680,GO:0016020;gbkey=CDS;gene=dtpD;go_component=membrane|0016020||IEA;go_function=peptide transmembrane transporter activity|1904680||IEA;go_process=oligopeptide transport|0006857||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225610.1;locus_tag=PHA56_RS21065;product=dipeptide permease DtpD;protein_id=WP_014228245.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4455961 4458108 . - . ID=gene-PHA56_RS21070;Name=cadA;gbkey=Gene;gene=cadA;gene_biotype=protein_coding;locus_tag=PHA56_RS21070;old_locus_tag=PHA56_21070 NZ_CP116214.1 Protein Homology CDS 4455961 4458108 . - 0 ID=cds-WP_004848492.1;Parent=gene-PHA56_RS21070;Dbxref=Genbank:WP_004848492.1;Name=WP_004848492.1;gbkey=CDS;gene=cadA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225609.1;locus_tag=PHA56_RS21070;product=lysine decarboxylase CadA;protein_id=WP_004848492.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4458190 4459527 . - . ID=gene-PHA56_RS21075;Name=cadB;gbkey=Gene;gene=cadB;gene_biotype=protein_coding;locus_tag=PHA56_RS21075;old_locus_tag=PHA56_21075 NZ_CP116214.1 Protein Homology CDS 4458190 4459527 . - 0 ID=cds-WP_004848490.1;Parent=gene-PHA56_RS21075;Dbxref=Genbank:WP_004848490.1;Name=WP_004848490.1;Ontology_term=GO:0043872;gbkey=CDS;gene=cadB;go_function=lysine:cadaverine antiporter activity|0043872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225608.1;locus_tag=PHA56_RS21075;product=cadaverine/lysine antiporter;protein_id=WP_004848490.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4459892 4461424 . - . ID=gene-PHA56_RS21080;Name=cadC;gbkey=Gene;gene=cadC;gene_biotype=protein_coding;locus_tag=PHA56_RS21080;old_locus_tag=PHA56_21080 NZ_CP116214.1 Protein Homology CDS 4459892 4461424 . - 0 ID=cds-WP_042934040.1;Parent=gene-PHA56_RS21080;Dbxref=Genbank:WP_042934040.1;Name=WP_042934040.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=cadC;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225607.1;locus_tag=PHA56_RS21080;product=lysine decarboxylation/transport transcriptional activator CadC;protein_id=WP_042934040.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4461777 4462643 . + . ID=gene-PHA56_RS21085;Name=PHA56_RS21085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS21085;old_locus_tag=PHA56_21085 NZ_CP116214.1 Protein Homology CDS 4461777 4462643 . + 0 ID=cds-WP_038424177.1;Parent=gene-PHA56_RS21085;Dbxref=Genbank:WP_038424177.1;Name=WP_038424177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225604.1;locus_tag=PHA56_RS21085;product=GNAT family N-acetyltransferase;protein_id=WP_038424177.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4462681 4463556 . - . ID=gene-PHA56_RS21090;Name=PHA56_RS21090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS21090;old_locus_tag=PHA56_21090 NZ_CP116214.1 Protein Homology CDS 4462681 4463556 . - 0 ID=cds-WP_076752509.1;Parent=gene-PHA56_RS21090;Dbxref=Genbank:WP_076752509.1;Name=WP_076752509.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009652615.1;locus_tag=PHA56_RS21090;product=LysR substrate-binding domain-containing protein;protein_id=WP_076752509.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4463694 4464221 . + . ID=gene-PHA56_RS21095;Name=PHA56_RS21095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS21095;old_locus_tag=PHA56_21095 NZ_CP116214.1 Protein Homology CDS 4463694 4464221 . + 0 ID=cds-WP_038424175.1;Parent=gene-PHA56_RS21095;Dbxref=Genbank:WP_038424175.1;Name=WP_038424175.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014837702.1;locus_tag=PHA56_RS21095;product=hypothetical protein;protein_id=WP_038424175.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4464246 4465073 . + . ID=gene-PHA56_RS21100;Name=PHA56_RS21100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS21100;old_locus_tag=PHA56_21100 NZ_CP116214.1 Protein Homology CDS 4464246 4465073 . + 0 ID=cds-WP_038424174.1;Parent=gene-PHA56_RS21100;Dbxref=Genbank:WP_038424174.1;Name=WP_038424174.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014837701.1;locus_tag=PHA56_RS21100;product=MBL fold metallo-hydrolase;protein_id=WP_038424174.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4465258 4467234 . + . ID=gene-PHA56_RS21105;Name=PHA56_RS21105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS21105;old_locus_tag=PHA56_21105 NZ_CP116214.1 Protein Homology CDS 4465258 4467234 . + 0 ID=cds-WP_038424173.1;Parent=gene-PHA56_RS21105;Dbxref=Genbank:WP_038424173.1;Name=WP_038424173.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004111086.1;locus_tag=PHA56_RS21105;product=glycoside hydrolase family 28 protein;protein_id=WP_038424173.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4467458 4468072 . - . ID=gene-PHA56_RS21110;Name=PHA56_RS21110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS21110;old_locus_tag=PHA56_21110 NZ_CP116214.1 Protein Homology CDS 4467458 4468072 . - 0 ID=cds-WP_271292934.1;Parent=gene-PHA56_RS21110;Dbxref=Genbank:WP_271292934.1;Name=WP_271292934.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004130088.1;locus_tag=PHA56_RS21110;product=FMN-binding negative transcriptional regulator;protein_id=WP_271292934.1;transl_table=11 NZ_CP116214.1 RefSeq pseudogene 4468406 4468546 . + . ID=gene-PHA56_RS21115;Name=PHA56_RS21115;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS21115;old_locus_tag=PHA56_21115;partial=true;pseudo=true;start_range=.,4468406 NZ_CP116214.1 Protein Homology CDS 4468406 4468546 . + 0 ID=cds-PHA56_RS21115;Parent=gene-PHA56_RS21115;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017898879.1;locus_tag=PHA56_RS21115;partial=true;product=integrase;pseudo=true;start_range=.,4468406;transl_table=11 NZ_CP116214.1 RefSeq gene 4468565 4468641 . - . ID=gene-PHA56_RS21120;Name=PHA56_RS21120;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA56_RS21120;old_locus_tag=PHA56_21120 NZ_CP116214.1 tRNAscan-SE tRNA 4468565 4468641 . - . ID=rna-PHA56_RS21120;Parent=gene-PHA56_RS21120;anticodon=(pos:complement(4468605..4468607));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS21120;product=tRNA-Arg NZ_CP116214.1 tRNAscan-SE exon 4468565 4468641 . - . ID=exon-PHA56_RS21120-1;Parent=rna-PHA56_RS21120;anticodon=(pos:complement(4468605..4468607));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS21120;product=tRNA-Arg NZ_CP116214.1 RefSeq gene 4468982 4469848 . + . ID=gene-PHA56_RS21125;Name=folD;gbkey=Gene;gene=folD;gene_biotype=protein_coding;locus_tag=PHA56_RS21125;old_locus_tag=PHA56_21125 NZ_CP116214.1 Protein Homology CDS 4468982 4469848 . + 0 ID=cds-WP_038424172.1;Parent=gene-PHA56_RS21125;Dbxref=Genbank:WP_038424172.1;Name=WP_038424172.1;Ontology_term=GO:0004488;gbkey=CDS;gene=folD;go_function=methylenetetrahydrofolate dehydrogenase (NADP+) activity|0004488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225533.1;locus_tag=PHA56_RS21125;product=bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD;protein_id=WP_038424172.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4469850 4470062 . + . ID=gene-PHA56_RS21130;Name=ybcJ;gbkey=Gene;gene=ybcJ;gene_biotype=protein_coding;locus_tag=PHA56_RS21130;old_locus_tag=PHA56_21130 NZ_CP116214.1 Protein Homology CDS 4469850 4470062 . + 0 ID=cds-WP_004099787.1;Parent=gene-PHA56_RS21130;Dbxref=Genbank:WP_004099787.1;Name=WP_004099787.1;gbkey=CDS;gene=ybcJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004099787.1;locus_tag=PHA56_RS21130;product=ribosome-associated protein YbcJ;protein_id=WP_004099787.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4470357 4471742 . - . ID=gene-PHA56_RS21135;Name=cysS;gbkey=Gene;gene=cysS;gene_biotype=protein_coding;locus_tag=PHA56_RS21135;old_locus_tag=PHA56_21135 NZ_CP116214.1 Protein Homology CDS 4470357 4471742 . - 0 ID=cds-WP_038424171.1;Parent=gene-PHA56_RS21135;Dbxref=Genbank:WP_038424171.1;Name=WP_038424171.1;Ontology_term=GO:0006423,GO:0004817,GO:0005737;gbkey=CDS;gene=cysS;go_component=cytoplasm|0005737||IEA;go_function=cysteine-tRNA ligase activity|0004817||IEA;go_process=cysteinyl-tRNA aminoacylation|0006423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125243.1;locus_tag=PHA56_RS21135;product=cysteine--tRNA ligase;protein_id=WP_038424171.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4471916 4472410 . + . ID=gene-PHA56_RS21140;Name=ppiB;gbkey=Gene;gene=ppiB;gene_biotype=protein_coding;locus_tag=PHA56_RS21140;old_locus_tag=PHA56_21140 NZ_CP116214.1 Protein Homology CDS 4471916 4472410 . + 0 ID=cds-WP_004099775.1;Parent=gene-PHA56_RS21140;Dbxref=Genbank:WP_004099775.1;Name=WP_004099775.1;gbkey=CDS;gene=ppiB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465360.1;locus_tag=PHA56_RS21140;product=peptidylprolyl isomerase B;protein_id=WP_004099775.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4472414 4473136 . + . ID=gene-PHA56_RS21145;Name=lpxH;gbkey=Gene;gene=lpxH;gene_biotype=protein_coding;locus_tag=PHA56_RS21145;old_locus_tag=PHA56_21145 NZ_CP116214.1 Protein Homology CDS 4472414 4473136 . + 0 ID=cds-WP_038424170.1;Parent=gene-PHA56_RS21145;Dbxref=Genbank:WP_038424170.1;Name=WP_038424170.1;Ontology_term=GO:0009245,GO:0008758;gbkey=CDS;gene=lpxH;go_function=UDP-2%2C3-diacylglucosamine hydrolase activity|0008758||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225529.1;locus_tag=PHA56_RS21145;product=UDP-2%2C3-diacylglucosamine diphosphatase;protein_id=WP_038424170.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4473409 4473918 . + . ID=gene-PHA56_RS21150;Name=purE;gbkey=Gene;gene=purE;gene_biotype=protein_coding;locus_tag=PHA56_RS21150;old_locus_tag=PHA56_21150 NZ_CP116214.1 Protein Homology CDS 4473409 4473918 . + 0 ID=cds-WP_004130058.1;Parent=gene-PHA56_RS21150;Dbxref=Genbank:WP_004130058.1;Name=WP_004130058.1;Ontology_term=GO:0009152,GO:0004638,GO:0009320;gbkey=CDS;gene=purE;go_component=phosphoribosylaminoimidazole carboxylase complex|0009320||IEA;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225527.1;locus_tag=PHA56_RS21150;product=5-(carboxyamino)imidazole ribonucleotide mutase;protein_id=WP_004130058.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4473915 4474982 . + . ID=gene-PHA56_RS21155;Name=purK;gbkey=Gene;gene=purK;gene_biotype=protein_coding;locus_tag=PHA56_RS21155;old_locus_tag=PHA56_21155 NZ_CP116214.1 Protein Homology CDS 4473915 4474982 . + 0 ID=cds-WP_038424169.1;Parent=gene-PHA56_RS21155;Dbxref=Genbank:WP_038424169.1;Name=WP_038424169.1;Ontology_term=GO:0006189,GO:0004638,GO:0005524,GO:0046872;gbkey=CDS;gene=purK;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225526.1;locus_tag=PHA56_RS21155;product=5-(carboxyamino)imidazole ribonucleotide synthase;protein_id=WP_038424169.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4475250 4476329 . + . ID=gene-PHA56_RS21160;Name=mnmH;gbkey=Gene;gene=mnmH;gene_biotype=protein_coding;locus_tag=PHA56_RS21160;old_locus_tag=PHA56_21160 NZ_CP116214.1 Protein Homology CDS 4475250 4476329 . + 0 ID=cds-WP_032719617.1;Parent=gene-PHA56_RS21160;Dbxref=Genbank:WP_032719617.1;Name=WP_032719617.1;Ontology_term=GO:0002098,GO:0043828;gbkey=CDS;gene=mnmH;go_function=tRNA 2-selenouridine synthase activity|0043828||IEA;go_process=tRNA wobble uridine modification|0002098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004099733.1;locus_tag=PHA56_RS21160;product=tRNA 2-selenouridine(34) synthase MnmH;protein_id=WP_032719617.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4476447 4477592 . - . ID=gene-PHA56_RS21165;Name=PHA56_RS21165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS21165;old_locus_tag=PHA56_21165 NZ_CP116214.1 Protein Homology CDS 4476447 4477592 . - 0 ID=cds-WP_004130005.1;Parent=gene-PHA56_RS21165;Dbxref=Genbank:WP_004130005.1;Name=WP_004130005.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225524.1;locus_tag=PHA56_RS21165;product=porin;protein_id=WP_004130005.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4477802 4478110 . + . ID=gene-PHA56_RS21170;Name=PHA56_RS21170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS21170;old_locus_tag=PHA56_21170 NZ_CP116214.1 Protein Homology CDS 4477802 4478110 . + 0 ID=cds-WP_014228233.1;Parent=gene-PHA56_RS21170;Dbxref=Genbank:WP_014228233.1;Name=WP_014228233.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014228233.1;locus_tag=PHA56_RS21170;product=monooxygenase;protein_id=WP_014228233.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4478234 4480651 . - . ID=gene-PHA56_RS21175;Name=PHA56_RS21175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS21175;old_locus_tag=PHA56_21175 NZ_CP116214.1 Protein Homology CDS 4478234 4480651 . - 0 ID=cds-WP_032694169.1;Parent=gene-PHA56_RS21175;Dbxref=Genbank:WP_032694169.1;Name=WP_032694169.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014837620.1;locus_tag=PHA56_RS21175;product=ABC transporter permease;protein_id=WP_032694169.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4480648 4481334 . - . ID=gene-PHA56_RS21180;Name=PHA56_RS21180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS21180;old_locus_tag=PHA56_21180 NZ_CP116214.1 Protein Homology CDS 4480648 4481334 . - 0 ID=cds-WP_004099723.1;Parent=gene-PHA56_RS21180;Dbxref=Genbank:WP_004099723.1;Name=WP_004099723.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225521.1;locus_tag=PHA56_RS21180;product=ABC transporter ATP-binding protein;protein_id=WP_004099723.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4481305 4481928 . + . ID=gene-PHA56_RS21185;Name=tesA;gbkey=Gene;gene=tesA;gene_biotype=protein_coding;locus_tag=PHA56_RS21185;old_locus_tag=PHA56_21185 NZ_CP116214.1 Protein Homology CDS 4481305 4481928 . + 0 ID=cds-WP_032748323.1;Parent=gene-PHA56_RS21185;Dbxref=Genbank:WP_032748323.1;Name=WP_032748323.1;Ontology_term=GO:0006629,GO:0016298;gbkey=CDS;gene=tesA;go_function=lipase activity|0016298||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225520.1;locus_tag=PHA56_RS21185;product=multifunctional acyl-CoA thioesterase I/protease I/lysophospholipase L1;protein_id=WP_032748323.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4481918 4482727 . + . ID=gene-PHA56_RS21190;Name=PHA56_RS21190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS21190;old_locus_tag=PHA56_21190 NZ_CP116214.1 Protein Homology CDS 4481918 4482727 . + 0 ID=cds-WP_162933641.1;Parent=gene-PHA56_RS21190;Dbxref=Genbank:WP_162933641.1;Name=WP_162933641.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225519.1;locus_tag=PHA56_RS21190;product=SDR family oxidoreductase;protein_id=WP_162933641.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4482789 4483643 . + . ID=gene-PHA56_RS21195;Name=PHA56_RS21195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS21195;old_locus_tag=PHA56_21195 NZ_CP116214.1 Protein Homology CDS 4482789 4483643 . + 0 ID=cds-WP_014228228.1;Parent=gene-PHA56_RS21195;Dbxref=Genbank:WP_014228228.1;Name=WP_014228228.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225518.1;locus_tag=PHA56_RS21195;product=co-chaperone YbbN;protein_id=WP_014228228.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4483752 4484534 . - . ID=gene-PHA56_RS21200;Name=fetB;gbkey=Gene;gene=fetB;gene_biotype=protein_coding;locus_tag=PHA56_RS21200;old_locus_tag=PHA56_21200 NZ_CP116214.1 Protein Homology CDS 4483752 4484534 . - 0 ID=cds-WP_014228227.1;Parent=gene-PHA56_RS21200;Dbxref=Genbank:WP_014228227.1;Name=WP_014228227.1;gbkey=CDS;gene=fetB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004099712.1;locus_tag=PHA56_RS21200;product=iron export ABC transporter permease subunit FetB;protein_id=WP_014228227.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4484521 4485201 . - . ID=gene-PHA56_RS21205;Name=fetA;gbkey=Gene;gene=fetA;gene_biotype=protein_coding;locus_tag=PHA56_RS21205;old_locus_tag=PHA56_21205 NZ_CP116214.1 Protein Homology CDS 4484521 4485201 . - 0 ID=cds-WP_004848402.1;Parent=gene-PHA56_RS21205;Dbxref=Genbank:WP_004848402.1;Name=WP_004848402.1;gbkey=CDS;gene=fetA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225516.1;locus_tag=PHA56_RS21205;product=iron ABC transporter ATP-binding protein FetA;protein_id=WP_004848402.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4485338 4486255 . + . ID=gene-PHA56_RS21210;Name=PHA56_RS21210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS21210;old_locus_tag=PHA56_21210 NZ_CP116214.1 Protein Homology CDS 4485338 4486255 . + 0 ID=cds-WP_004129981.1;Parent=gene-PHA56_RS21210;Dbxref=Genbank:WP_004129981.1;Name=WP_004129981.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225515.1;locus_tag=PHA56_RS21210;product=SPFH/Band 7/PHB domain protein;protein_id=WP_004129981.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4486252 4486710 . + . ID=gene-PHA56_RS21215;Name=PHA56_RS21215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS21215;old_locus_tag=PHA56_21215 NZ_CP116214.1 Protein Homology CDS 4486252 4486710 . + 0 ID=cds-WP_009652651.1;Parent=gene-PHA56_RS21215;Dbxref=Genbank:WP_009652651.1;Name=WP_009652651.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225514.1;locus_tag=PHA56_RS21215;product=NfeD family protein;protein_id=WP_009652651.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4486732 4488900 . + . ID=gene-PHA56_RS21220;Name=PHA56_RS21220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS21220;old_locus_tag=PHA56_21220 NZ_CP116214.1 Protein Homology CDS 4486732 4488900 . + 0 ID=cds-WP_032719624.1;Parent=gene-PHA56_RS21220;Dbxref=Genbank:WP_032719624.1;Name=WP_032719624.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016155891.1;locus_tag=PHA56_RS21220;product=hypothetical protein;protein_id=WP_032719624.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4488870 4489586 . + . ID=gene-PHA56_RS21225;Name=PHA56_RS21225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS21225;old_locus_tag=PHA56_21225 NZ_CP116214.1 Protein Homology CDS 4488870 4489586 . + 0 ID=cds-WP_014228224.1;Parent=gene-PHA56_RS21225;Dbxref=Genbank:WP_014228224.1;Name=WP_014228224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003835804.1;locus_tag=PHA56_RS21225;product=DUF3142 domain-containing protein;protein_id=WP_014228224.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4489583 4489993 . - . ID=gene-PHA56_RS21230;Name=cueR;gbkey=Gene;gene=cueR;gene_biotype=protein_coding;locus_tag=PHA56_RS21230;old_locus_tag=PHA56_21230 NZ_CP116214.1 Protein Homology CDS 4489583 4489993 . - 0 ID=cds-WP_014228223.1;Parent=gene-PHA56_RS21230;Dbxref=Genbank:WP_014228223.1;Name=WP_014228223.1;gbkey=CDS;gene=cueR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004142976.1;locus_tag=PHA56_RS21230;product=Cu(I)-responsive transcriptional regulator;protein_id=WP_014228223.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4490100 4492601 . + . ID=gene-PHA56_RS21235;Name=copA;gbkey=Gene;gene=copA;gene_biotype=protein_coding;locus_tag=PHA56_RS21235;old_locus_tag=PHA56_21235 NZ_CP116214.1 Protein Homology CDS 4490100 4492601 . + 0 ID=cds-WP_032694165.1;Parent=gene-PHA56_RS21235;Dbxref=Genbank:WP_032694165.1;Name=WP_032694165.1;Ontology_term=GO:0006812,GO:0019829;gbkey=CDS;gene=copA;go_function=ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA;go_process=monoatomic cation transport|0006812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459493.1;locus_tag=PHA56_RS21235;product=copper-exporting P-type ATPase CopA;protein_id=WP_032694165.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4492676 4493926 . - . ID=gene-PHA56_RS21240;Name=PHA56_RS21240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS21240;old_locus_tag=PHA56_21240 NZ_CP116214.1 Protein Homology CDS 4492676 4493926 . - 0 ID=cds-WP_014228221.1;Parent=gene-PHA56_RS21240;Dbxref=Genbank:WP_014228221.1;Name=WP_014228221.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014837615.1;locus_tag=PHA56_RS21240;product=phospholipase D-like domain-containing protein;protein_id=WP_014228221.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4493919 4494566 . - . ID=gene-PHA56_RS21245;Name=PHA56_RS21245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS21245;old_locus_tag=PHA56_21245 NZ_CP116214.1 Protein Homology CDS 4493919 4494566 . - 0 ID=cds-WP_004137930.1;Parent=gene-PHA56_RS21245;Dbxref=Genbank:WP_004137930.1;Name=WP_004137930.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004137930.1;locus_tag=PHA56_RS21245;product=MotA/TolQ/ExbB proton channel family protein;protein_id=WP_004137930.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4494586 4496826 . - . ID=gene-PHA56_RS21250;Name=PHA56_RS21250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS21250;old_locus_tag=PHA56_21250 NZ_CP116214.1 Protein Homology CDS 4494586 4496826 . - 0 ID=cds-WP_014837614.1;Parent=gene-PHA56_RS21250;Dbxref=Genbank:WP_014837614.1;Name=WP_014837614.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006323436.1;locus_tag=PHA56_RS21250;product=TonB-dependent receptor;protein_id=WP_014837614.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4496861 4497604 . - . ID=gene-PHA56_RS21255;Name=PHA56_RS21255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS21255;old_locus_tag=PHA56_21255 NZ_CP116214.1 Protein Homology CDS 4496861 4497604 . - 0 ID=cds-WP_032719626.1;Parent=gene-PHA56_RS21255;Dbxref=Genbank:WP_032719626.1;Name=WP_032719626.1;Ontology_term=GO:0006810,GO:0015291;gbkey=CDS;go_function=secondary active transmembrane transporter activity|0015291||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014837613.1;locus_tag=PHA56_RS21255;product=energy transducer TonB;protein_id=WP_032719626.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4497606 4498013 . - . ID=gene-PHA56_RS21260;Name=PHA56_RS21260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS21260;old_locus_tag=PHA56_21260 NZ_CP116214.1 Protein Homology CDS 4497606 4498013 . - 0 ID=cds-WP_004848379.1;Parent=gene-PHA56_RS21260;Dbxref=Genbank:WP_004848379.1;Name=WP_004848379.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009652625.1;locus_tag=PHA56_RS21260;product=biopolymer transporter ExbD;protein_id=WP_004848379.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4498336 4499130 . + . ID=gene-PHA56_RS21265;Name=PHA56_RS21265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS21265;old_locus_tag=PHA56_21265 NZ_CP116214.1 Protein Homology CDS 4498336 4499130 . + 0 ID=cds-WP_025107138.1;Parent=gene-PHA56_RS21265;Dbxref=Genbank:WP_025107138.1;Name=WP_025107138.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225511.1;locus_tag=PHA56_RS21265;product=TraB/GumN family protein;protein_id=WP_025107138.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4499332 4499811 . + . ID=gene-PHA56_RS21270;Name=ybaK;gbkey=Gene;gene=ybaK;gene_biotype=protein_coding;locus_tag=PHA56_RS21270;old_locus_tag=PHA56_21270 NZ_CP116214.1 Protein Homology CDS 4499332 4499811 . + 0 ID=cds-WP_014228216.1;Parent=gene-PHA56_RS21270;Dbxref=Genbank:WP_014228216.1;Name=WP_014228216.1;Ontology_term=GO:0002161;gbkey=CDS;gene=ybaK;go_function=aminoacyl-tRNA editing activity|0002161||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818871.1;locus_tag=PHA56_RS21270;product=Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK;protein_id=WP_014228216.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4499940 4501592 . - . ID=gene-PHA56_RS21275;Name=ushA;gbkey=Gene;gene=ushA;gene_biotype=protein_coding;locus_tag=PHA56_RS21275;old_locus_tag=PHA56_21275 NZ_CP116214.1 Protein Homology CDS 4499940 4501592 . - 0 ID=cds-WP_014228215.1;Parent=gene-PHA56_RS21275;Dbxref=Genbank:WP_014228215.1;Name=WP_014228215.1;Ontology_term=GO:0009166,GO:0000166,GO:0016787,GO:0046872;gbkey=CDS;gene=ushA;go_function=nucleotide binding|0000166||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225509.1;locus_tag=PHA56_RS21275;product=bifunctional UDP-sugar hydrolase/5'-nucleotidase UshA;protein_id=WP_014228215.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4501756 4502976 . + . ID=gene-PHA56_RS21280;Name=PHA56_RS21280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS21280;old_locus_tag=PHA56_21280 NZ_CP116214.1 Protein Homology CDS 4501756 4502976 . + 0 ID=cds-WP_004848370.1;Parent=gene-PHA56_RS21280;Dbxref=Genbank:WP_004848370.1;Name=WP_004848370.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225508.1;locus_tag=PHA56_RS21280;product=MFS transporter;protein_id=WP_004848370.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4503334 4505010 . + . ID=gene-PHA56_RS21285;Name=ybaL;gbkey=Gene;gene=ybaL;gene_biotype=protein_coding;locus_tag=PHA56_RS21285;old_locus_tag=PHA56_21285 NZ_CP116214.1 Protein Homology CDS 4503334 4505010 . + 0 ID=cds-WP_014228214.1;Parent=gene-PHA56_RS21285;Dbxref=Genbank:WP_014228214.1;Name=WP_014228214.1;Ontology_term=GO:0006813,GO:0008324,GO:0051139,GO:0016020;gbkey=CDS;gene=ybaL;go_component=membrane|0016020||IEA;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA,metal cation:proton antiporter activity|0051139||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225505.1;locus_tag=PHA56_RS21285;product=YbaL family putative K(+) efflux transporter;protein_id=WP_014228214.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4505054 4506358 . - . ID=gene-PHA56_RS21290;Name=PHA56_RS21290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS21290;old_locus_tag=PHA56_21290 NZ_CP116214.1 Protein Homology CDS 4505054 4506358 . - 0 ID=cds-WP_076752506.1;Parent=gene-PHA56_RS21290;Dbxref=Genbank:WP_076752506.1;Name=WP_076752506.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225504.1;locus_tag=PHA56_RS21290;product=inosine/guanosine kinase;protein_id=WP_076752506.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4506422 4507384 . - . ID=gene-PHA56_RS21295;Name=hemH;gbkey=Gene;gene=hemH;gene_biotype=protein_coding;locus_tag=PHA56_RS21295;old_locus_tag=PHA56_21295 NZ_CP116214.1 Protein Homology CDS 4506422 4507384 . - 0 ID=cds-WP_014228213.1;Parent=gene-PHA56_RS21295;Dbxref=Genbank:WP_014228213.1;Name=WP_014228213.1;Ontology_term=GO:0006779,GO:0004325;gbkey=CDS;gene=hemH;go_function=ferrochelatase activity|0004325||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225503.1;locus_tag=PHA56_RS21295;product=ferrochelatase;protein_id=WP_014228213.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4507512 4508156 . - . ID=gene-PHA56_RS21300;Name=adk;gbkey=Gene;gene=adk;gene_biotype=protein_coding;locus_tag=PHA56_RS21300;old_locus_tag=PHA56_21300 NZ_CP116214.1 Protein Homology CDS 4507512 4508156 . - 0 ID=cds-WP_004848363.1;Parent=gene-PHA56_RS21300;Dbxref=Genbank:WP_004848363.1;Name=WP_004848363.1;Ontology_term=GO:0006139,GO:0004017,GO:0005524;gbkey=CDS;gene=adk;go_function=adenylate kinase activity|0004017||IEA,ATP binding|0005524||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007706188.1;locus_tag=PHA56_RS21300;product=adenylate kinase;protein_id=WP_004848363.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4508345 4510219 . - . ID=gene-PHA56_RS21305;Name=htpG;gbkey=Gene;gene=htpG;gene_biotype=protein_coding;locus_tag=PHA56_RS21305;old_locus_tag=PHA56_21305 NZ_CP116214.1 Protein Homology CDS 4508345 4510219 . - 0 ID=cds-WP_009653565.1;Parent=gene-PHA56_RS21305;Dbxref=Genbank:WP_009653565.1;Name=WP_009653565.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887,GO:0051082;gbkey=CDS;gene=htpG;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225501.1;locus_tag=PHA56_RS21305;product=molecular chaperone HtpG;protein_id=WP_009653565.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4510331 4510936 . - . ID=gene-PHA56_RS21310;Name=recR;gbkey=Gene;gene=recR;gene_biotype=protein_coding;locus_tag=PHA56_RS21310;old_locus_tag=PHA56_21310 NZ_CP116214.1 Protein Homology CDS 4510331 4510936 . - 0 ID=cds-WP_004129946.1;Parent=gene-PHA56_RS21310;Dbxref=Genbank:WP_004129946.1;Name=WP_004129946.1;Ontology_term=GO:0006281,GO:0006310;gbkey=CDS;gene=recR;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225500.1;locus_tag=PHA56_RS21310;product=recombination mediator RecR;protein_id=WP_004129946.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4510936 4511268 . - . ID=gene-PHA56_RS21315;Name=PHA56_RS21315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS21315;old_locus_tag=PHA56_21315 NZ_CP116214.1 Protein Homology CDS 4510936 4511268 . - 0 ID=cds-WP_004099673.1;Parent=gene-PHA56_RS21315;Dbxref=Genbank:WP_004099673.1;Name=WP_004099673.1;Ontology_term=GO:0008150,GO:0003677,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001364632.1;locus_tag=PHA56_RS21315;product=YbaB/EbfC family nucleoid-associated protein;protein_id=WP_004099673.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4511326 4513233 . - . ID=gene-PHA56_RS21320;Name=dnaX;gbkey=Gene;gene=dnaX;gene_biotype=protein_coding;locus_tag=PHA56_RS21320;old_locus_tag=PHA56_21320 NZ_CP116214.1 Protein Homology CDS 4511326 4513233 . - 0 ID=cds-WP_014228212.1;Parent=gene-PHA56_RS21320;Dbxref=Genbank:WP_014228212.1;Name=WP_014228212.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0005524,GO:0009360;gbkey=CDS;gene=dnaX;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415003.1;locus_tag=PHA56_RS21320;product=DNA polymerase III subunit gamma/tau;protein_id=WP_014228212.1;transl_table=11 NZ_CP116214.1 cmsearch sequence_feature 4511929 4511993 . - . ID=id-PHA56_RS21320;Dbxref=RFAM:RF00382;Note=DnaX frameshifting element;gbkey=misc_feature;gene=dnaX;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA56_RS21320 NZ_CP116214.1 RefSeq gene 4513325 4513876 . - . ID=gene-PHA56_RS21325;Name=apt;gbkey=Gene;gene=apt;gene_biotype=protein_coding;locus_tag=PHA56_RS21325;old_locus_tag=PHA56_21325 NZ_CP116214.1 Protein Homology CDS 4513325 4513876 . - 0 ID=cds-WP_004099669.1;Parent=gene-PHA56_RS21325;Dbxref=Genbank:WP_004099669.1;Name=WP_004099669.1;Ontology_term=GO:0006168,GO:0003999;gbkey=CDS;gene=apt;go_function=adenine phosphoribosyltransferase activity|0003999||IEA;go_process=adenine salvage|0006168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125198.1;locus_tag=PHA56_RS21325;product=adenine phosphoribosyltransferase;protein_id=WP_004099669.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4514027 4514404 . - . ID=gene-PHA56_RS21330;Name=PHA56_RS21330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS21330;old_locus_tag=PHA56_21330 NZ_CP116214.1 Protein Homology CDS 4514027 4514404 . - 0 ID=cds-WP_004848353.1;Parent=gene-PHA56_RS21330;Dbxref=Genbank:WP_004848353.1;Name=WP_004848353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225495.1;locus_tag=PHA56_RS21330;product=DUF454 family protein;protein_id=WP_004848353.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4514474 4515001 . + . ID=gene-PHA56_RS21335;Name=priC;gbkey=Gene;gene=priC;gene_biotype=protein_coding;locus_tag=PHA56_RS21335;old_locus_tag=PHA56_21335 NZ_CP116214.1 Protein Homology CDS 4514474 4515001 . + 0 ID=cds-WP_004848351.1;Parent=gene-PHA56_RS21335;Dbxref=Genbank:WP_004848351.1;Name=WP_004848351.1;gbkey=CDS;gene=priC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225494.1;locus_tag=PHA56_RS21335;product=primosomal replication protein N'';protein_id=WP_004848351.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4515016 4515189 . + . ID=gene-PHA56_RS21340;Name=rsmS;gbkey=Gene;gene=rsmS;gene_biotype=protein_coding;locus_tag=PHA56_RS21340;old_locus_tag=PHA56_21340 NZ_CP116214.1 Protein Homology CDS 4515016 4515189 . + 0 ID=cds-WP_014228211.1;Parent=gene-PHA56_RS21340;Dbxref=Genbank:WP_014228211.1;Name=WP_014228211.1;gbkey=CDS;gene=rsmS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008805442.1;locus_tag=PHA56_RS21340;product=pleiotropic regulatory protein RsmS;protein_id=WP_014228211.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4515256 4516179 . + . ID=gene-PHA56_RS21345;Name=PHA56_RS21345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS21345;old_locus_tag=PHA56_21345 NZ_CP116214.1 Protein Homology CDS 4515256 4516179 . + 0 ID=cds-WP_076752505.1;Parent=gene-PHA56_RS21345;Dbxref=Genbank:WP_076752505.1;Name=WP_076752505.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000440506.1;locus_tag=PHA56_RS21345;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=WP_076752505.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4516215 4519556 . - . ID=gene-PHA56_RS21350;Name=mscK;gbkey=Gene;gene=mscK;gene_biotype=protein_coding;locus_tag=PHA56_RS21350;old_locus_tag=PHA56_21350 NZ_CP116214.1 Protein Homology CDS 4516215 4519556 . - 0 ID=cds-WP_014228209.1;Parent=gene-PHA56_RS21350;Dbxref=Genbank:WP_014228209.1;Name=WP_014228209.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=mscK;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004111041.1;locus_tag=PHA56_RS21350;product=mechanosensitive channel MscK;protein_id=WP_014228209.1;transl_table=11 NZ_CP116214.1 RefSeq pseudogene 4519687 4520338 . - . ID=gene-PHA56_RS21355;Name=acrR;gbkey=Gene;gene=acrR;gene_biotype=pseudogene;locus_tag=PHA56_RS21355;old_locus_tag=PHA56_21355;pseudo=true NZ_CP116214.1 Protein Homology CDS 4519687 4520338 . - 0 ID=cds-PHA56_RS21355;Parent=gene-PHA56_RS21355;Note=frameshifted;gbkey=CDS;gene=acrR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004848342.1;locus_tag=PHA56_RS21355;product=multidrug efflux transporter transcriptional repressor AcrR;pseudo=true;transl_table=11 NZ_CP116214.1 RefSeq gene 4520481 4521674 . + . ID=gene-PHA56_RS21360;Name=acrA;gbkey=Gene;gene=acrA;gene_biotype=protein_coding;locus_tag=PHA56_RS21360;old_locus_tag=PHA56_21360 NZ_CP116214.1 Protein Homology CDS 4520481 4521674 . + 0 ID=cds-WP_004136054.1;Parent=gene-PHA56_RS21360;Dbxref=Genbank:WP_004136054.1;Name=WP_004136054.1;gbkey=CDS;gene=acrA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225489.1;locus_tag=PHA56_RS21360;product=multidrug efflux RND transporter periplasmic adaptor subunit AcrA;protein_id=WP_004136054.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4521697 4524843 . + . ID=gene-PHA56_RS21365;Name=acrB;gbkey=Gene;gene=acrB;gene_biotype=protein_coding;locus_tag=PHA56_RS21365;old_locus_tag=PHA56_21365 NZ_CP116214.1 Protein Homology CDS 4521697 4524843 . + 0 ID=cds-WP_221686856.1;Parent=gene-PHA56_RS21365;Dbxref=Genbank:WP_221686856.1;Name=WP_221686856.1;gbkey=CDS;gene=acrB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225488.1;locus_tag=PHA56_RS21365;product=multidrug efflux RND transporter permease subunit AcrB;protein_id=WP_221686856.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4525324 4525698 . + . ID=gene-PHA56_RS21370;Name=tomB;gbkey=Gene;gene=tomB;gene_biotype=protein_coding;locus_tag=PHA56_RS21370;old_locus_tag=PHA56_21370 NZ_CP116214.1 Protein Homology CDS 4525324 4525698 . + 0 ID=cds-WP_004129911.1;Parent=gene-PHA56_RS21370;Dbxref=Genbank:WP_004129911.1;Name=WP_004129911.1;gbkey=CDS;gene=tomB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001741190.1;locus_tag=PHA56_RS21370;product=Hha toxicity modulator TomB;protein_id=WP_004129911.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4525725 4525943 . + . ID=gene-PHA56_RS21375;Name=PHA56_RS21375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS21375;old_locus_tag=PHA56_21375 NZ_CP116214.1 Protein Homology CDS 4525725 4525943 . + 0 ID=cds-WP_004099646.1;Parent=gene-PHA56_RS21375;Dbxref=Genbank:WP_004099646.1;Name=WP_004099646.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459468.1;locus_tag=PHA56_RS21375;product=HHA domain-containing protein;protein_id=WP_004099646.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4526106 4526672 . + . ID=gene-PHA56_RS21380;Name=maa;gbkey=Gene;gene=maa;gene_biotype=protein_coding;locus_tag=PHA56_RS21380;old_locus_tag=PHA56_21380 NZ_CP116214.1 Protein Homology CDS 4526106 4526672 . + 0 ID=cds-WP_038424164.1;Parent=gene-PHA56_RS21380;Dbxref=Genbank:WP_038424164.1;Name=WP_038424164.1;Ontology_term=GO:0016407;gbkey=CDS;gene=maa;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004129909.1;locus_tag=PHA56_RS21380;product=maltose O-acetyltransferase;protein_id=WP_038424164.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4526644 4526778 . - . ID=gene-PHA56_RS21385;Name=PHA56_RS21385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS21385;old_locus_tag=PHA56_21385 NZ_CP116214.1 Protein Homology CDS 4526644 4526778 . - 0 ID=cds-WP_223226764.1;Parent=gene-PHA56_RS21385;Dbxref=Genbank:WP_223226764.1;Name=WP_223226764.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225484.1;locus_tag=PHA56_RS21385;product=hypothetical protein;protein_id=WP_223226764.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4526799 4527269 . + . ID=gene-PHA56_RS21390;Name=PHA56_RS21390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS21390;old_locus_tag=PHA56_21390 NZ_CP116214.1 Protein Homology CDS 4526799 4527269 . + 0 ID=cds-WP_014228205.1;Parent=gene-PHA56_RS21390;Dbxref=Genbank:WP_014228205.1;Name=WP_014228205.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225483.1;locus_tag=PHA56_RS21390;product=YlaC family protein;protein_id=WP_014228205.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4527244 4528698 . - . ID=gene-PHA56_RS21395;Name=PHA56_RS21395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS21395;old_locus_tag=PHA56_21395 NZ_CP116214.1 Protein Homology CDS 4527244 4528698 . - 0 ID=cds-WP_038424163.1;Parent=gene-PHA56_RS21395;Dbxref=Genbank:WP_038424163.1;Name=WP_038424163.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004099640.1;locus_tag=PHA56_RS21395;product=PLP-dependent aminotransferase family protein;protein_id=WP_038424163.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4528800 4529498 . + . ID=gene-PHA56_RS21400;Name=PHA56_RS21400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS21400;old_locus_tag=PHA56_21400 NZ_CP116214.1 Protein Homology CDS 4528800 4529498 . + 0 ID=cds-WP_014228203.1;Parent=gene-PHA56_RS21400;Dbxref=Genbank:WP_014228203.1;Name=WP_014228203.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017898895.1;locus_tag=PHA56_RS21400;product=GNAT family protein;protein_id=WP_014228203.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4529495 4529635 . - . ID=gene-PHA56_RS21405;Name=ykgO;gbkey=Gene;gene=ykgO;gene_biotype=protein_coding;locus_tag=PHA56_RS21405;old_locus_tag=PHA56_21405 NZ_CP116214.1 Protein Homology CDS 4529495 4529635 . - 0 ID=cds-WP_003859006.1;Parent=gene-PHA56_RS21405;Dbxref=Genbank:WP_003859006.1;Name=WP_003859006.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=ykgO;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459465.1;locus_tag=PHA56_RS21405;product=type B 50S ribosomal protein L36;protein_id=WP_003859006.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4529635 4529898 . - . ID=gene-PHA56_RS21410;Name=PHA56_RS21410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS21410;old_locus_tag=PHA56_21410 NZ_CP116214.1 Protein Homology CDS 4529635 4529898 . - 0 ID=cds-WP_004848323.1;Parent=gene-PHA56_RS21410;Dbxref=Genbank:WP_004848323.1;Name=WP_004848323.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004129897.1;locus_tag=PHA56_RS21410;product=type B 50S ribosomal protein L31;protein_id=WP_004848323.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4530011 4531084 . - . ID=gene-PHA56_RS21415;Name=PHA56_RS21415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS21415;old_locus_tag=PHA56_21415 NZ_CP116214.1 Protein Homology CDS 4530011 4531084 . - 0 ID=cds-WP_014837605.1;Parent=gene-PHA56_RS21415;Dbxref=Genbank:WP_014837605.1;Name=WP_014837605.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225478.1;locus_tag=PHA56_RS21415;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_014837605.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4531354 4532625 . + . ID=gene-PHA56_RS21420;Name=PHA56_RS21420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS21420;old_locus_tag=PHA56_21420 NZ_CP116214.1 Protein Homology CDS 4531354 4532625 . + 0 ID=cds-WP_014228201.1;Parent=gene-PHA56_RS21420;Dbxref=Genbank:WP_014228201.1;Name=WP_014228201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004177240.1;locus_tag=PHA56_RS21420;product=maltoporin;protein_id=WP_014228201.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4532749 4533063 . - . ID=gene-PHA56_RS21425;Name=PHA56_RS21425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS21425;old_locus_tag=PHA56_21425 NZ_CP116214.1 Protein Homology CDS 4532749 4533063 . - 0 ID=cds-WP_014837604.1;Parent=gene-PHA56_RS21425;Dbxref=Genbank:WP_014837604.1;Name=WP_014837604.1;Ontology_term=GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225475.1;locus_tag=PHA56_RS21425;product=glucose PTS transporter subunit EIIB;protein_id=WP_014837604.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4533129 4535186 . - . ID=gene-PHA56_RS21430;Name=PHA56_RS21430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS21430;old_locus_tag=PHA56_21430 NZ_CP116214.1 Protein Homology CDS 4533129 4535186 . - 0 ID=cds-WP_032694157.1;Parent=gene-PHA56_RS21430;Dbxref=Genbank:WP_032694157.1;Name=WP_032694157.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225474.1;locus_tag=PHA56_RS21430;product=beta-galactosidase;protein_id=WP_032694157.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4535218 4536420 . - . ID=gene-PHA56_RS21435;Name=PHA56_RS21435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS21435;old_locus_tag=PHA56_21435 NZ_CP116214.1 Protein Homology CDS 4535218 4536420 . - 0 ID=cds-WP_032694156.1;Parent=gene-PHA56_RS21435;Dbxref=Genbank:WP_032694156.1;Name=WP_032694156.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225473.1;locus_tag=PHA56_RS21435;product=arabinogalactan endo-beta-1%2C4-galactanase;protein_id=WP_032694156.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4536425 4537276 . - . ID=gene-PHA56_RS21440;Name=PHA56_RS21440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS21440;old_locus_tag=PHA56_21440 NZ_CP116214.1 Protein Homology CDS 4536425 4537276 . - 0 ID=cds-WP_014837601.1;Parent=gene-PHA56_RS21440;Dbxref=Genbank:WP_014837601.1;Name=WP_014837601.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225472.1;locus_tag=PHA56_RS21440;product=sugar ABC transporter permease;protein_id=WP_014837601.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4537287 4538594 . - . ID=gene-PHA56_RS21445;Name=PHA56_RS21445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS21445;old_locus_tag=PHA56_21445 NZ_CP116214.1 Protein Homology CDS 4537287 4538594 . - 0 ID=cds-WP_004848312.1;Parent=gene-PHA56_RS21445;Dbxref=Genbank:WP_004848312.1;Name=WP_004848312.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225471.1;locus_tag=PHA56_RS21445;product=sugar ABC transporter permease;protein_id=WP_004848312.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4538651 4539883 . - . ID=gene-PHA56_RS21450;Name=PHA56_RS21450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS21450;old_locus_tag=PHA56_21450 NZ_CP116214.1 Protein Homology CDS 4538651 4539883 . - 0 ID=cds-WP_014837600.1;Parent=gene-PHA56_RS21450;Dbxref=Genbank:WP_014837600.1;Name=WP_014837600.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225470.1;locus_tag=PHA56_RS21450;product=maltodextrin ABC transporter substrate-binding protein;protein_id=WP_014837600.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4540237 4541346 . + . ID=gene-PHA56_RS21455;Name=PHA56_RS21455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS21455;old_locus_tag=PHA56_21455 NZ_CP116214.1 Protein Homology CDS 4540237 4541346 . + 0 ID=cds-WP_038424162.1;Parent=gene-PHA56_RS21455;Dbxref=Genbank:WP_038424162.1;Name=WP_038424162.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016243364.1;locus_tag=PHA56_RS21455;product=ABC transporter ATP-binding protein;protein_id=WP_038424162.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4541590 4543176 . + . ID=gene-PHA56_RS21460;Name=PHA56_RS21460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS21460;old_locus_tag=PHA56_21460 NZ_CP116214.1 Protein Homology CDS 4541590 4543176 . + 0 ID=cds-WP_032719632.1;Parent=gene-PHA56_RS21460;Dbxref=Genbank:WP_032719632.1;Name=WP_032719632.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009653597.1;locus_tag=PHA56_RS21460;product=EAL domain-containing protein;protein_id=WP_032719632.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4543179 4543451 . - . ID=gene-PHA56_RS21465;Name=PHA56_RS21465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS21465;old_locus_tag=PHA56_21465 NZ_CP116214.1 Protein Homology CDS 4543179 4543451 . - 0 ID=cds-WP_004129869.1;Parent=gene-PHA56_RS21465;Dbxref=Genbank:WP_004129869.1;Name=WP_004129869.1;Ontology_term=GO:0006355,GO:0003677,GO:0046872;gbkey=CDS;go_function=DNA binding|0003677||IEA,metal ion binding|0046872||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123385.1;locus_tag=PHA56_RS21465;product=metal-sensing transcriptional repressor;protein_id=WP_004129869.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4543619 4544479 . + . ID=gene-PHA56_RS21470;Name=PHA56_RS21470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS21470;old_locus_tag=PHA56_21470 NZ_CP116214.1 Protein Homology CDS 4543619 4544479 . + 0 ID=cds-WP_271292935.1;Parent=gene-PHA56_RS21470;Dbxref=Genbank:WP_271292935.1;Name=WP_271292935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225465.1;locus_tag=PHA56_RS21470;product=nickel/cobalt efflux protein RcnA;protein_id=WP_271292935.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4544526 4544879 . - . ID=gene-PHA56_RS21475;Name=PHA56_RS21475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS21475;old_locus_tag=PHA56_21475 NZ_CP116214.1 Protein Homology CDS 4544526 4544879 . - 0 ID=cds-WP_004848301.1;Parent=gene-PHA56_RS21475;Dbxref=Genbank:WP_004848301.1;Name=WP_004848301.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308536.1;locus_tag=PHA56_RS21475;product=DUF1428 family protein;protein_id=WP_004848301.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4544972 4545586 . - . ID=gene-PHA56_RS21480;Name=PHA56_RS21480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS21480;old_locus_tag=PHA56_21480 NZ_CP116214.1 Protein Homology CDS 4544972 4545586 . - 0 ID=cds-WP_014228193.1;Parent=gene-PHA56_RS21480;Dbxref=Genbank:WP_014228193.1;Name=WP_014228193.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225464.1;locus_tag=PHA56_RS21480;product=membrane protein;protein_id=WP_014228193.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4545674 4547101 . + . ID=gene-PHA56_RS21485;Name=PHA56_RS21485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS21485;old_locus_tag=PHA56_21485 NZ_CP116214.1 Protein Homology CDS 4545674 4547101 . + 0 ID=cds-WP_014228192.1;Parent=gene-PHA56_RS21485;Dbxref=Genbank:WP_014228192.1;Name=WP_014228192.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225463.1;locus_tag=PHA56_RS21485;product=PLP-dependent aminotransferase family protein;protein_id=WP_014228192.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4547235 4547450 . - . ID=gene-PHA56_RS21490;Name=PHA56_RS21490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS21490;old_locus_tag=PHA56_21490 NZ_CP116214.1 Protein Homology CDS 4547235 4547450 . - 0 ID=cds-WP_004129860.1;Parent=gene-PHA56_RS21490;Dbxref=Genbank:WP_004129860.1;Name=WP_004129860.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225462.1;locus_tag=PHA56_RS21490;product=hypothetical protein;protein_id=WP_004129860.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4547447 4547704 . - . ID=gene-PHA56_RS21495;Name=PHA56_RS21495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS21495;old_locus_tag=PHA56_21495 NZ_CP116214.1 Protein Homology CDS 4547447 4547704 . - 0 ID=cds-WP_004848294.1;Parent=gene-PHA56_RS21495;Dbxref=Genbank:WP_004848294.1;Name=WP_004848294.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225461.1;locus_tag=PHA56_RS21495;product=hypothetical protein;protein_id=WP_004848294.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4548020 4548116 . - . ID=gene-PHA56_RS21500;Name=ffs;gbkey=Gene;gene=ffs;gene_biotype=SRP_RNA;locus_tag=PHA56_RS21500;old_locus_tag=PHA56_21500 NZ_CP116214.1 cmsearch SRP_RNA 4548020 4548116 . - . ID=rna-PHA56_RS21500;Parent=gene-PHA56_RS21500;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA56_RS21500;product=signal recognition particle sRNA small type NZ_CP116214.1 cmsearch exon 4548020 4548116 . - . ID=exon-PHA56_RS21500-1;Parent=rna-PHA56_RS21500;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA56_RS21500;product=signal recognition particle sRNA small type NZ_CP116214.1 RefSeq gene 4548371 4548778 . + . ID=gene-PHA56_RS21505;Name=PHA56_RS21505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS21505;old_locus_tag=PHA56_21505 NZ_CP116214.1 Protein Homology CDS 4548371 4548778 . + 0 ID=cds-WP_014228191.1;Parent=gene-PHA56_RS21505;Dbxref=Genbank:WP_014228191.1;Name=WP_014228191.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004178755.1;locus_tag=PHA56_RS21505;product=hypothetical protein;protein_id=WP_014228191.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4548844 4549155 . + . ID=gene-PHA56_RS21510;Name=PHA56_RS21510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS21510;old_locus_tag=PHA56_21510 NZ_CP116214.1 Protein Homology CDS 4548844 4549155 . + 0 ID=cds-WP_004848290.1;Parent=gene-PHA56_RS21510;Dbxref=Genbank:WP_004848290.1;Name=WP_004848290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225459.1;locus_tag=PHA56_RS21510;product=MGMT family protein;protein_id=WP_004848290.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4549195 4549704 . - . ID=gene-PHA56_RS21515;Name=PHA56_RS21515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS21515;old_locus_tag=PHA56_21515 NZ_CP116214.1 Protein Homology CDS 4549195 4549704 . - 0 ID=cds-WP_004848288.1;Parent=gene-PHA56_RS21515;Dbxref=Genbank:WP_004848288.1;Name=WP_004848288.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004129852.1;locus_tag=PHA56_RS21515;product=YbaY family lipoprotein;protein_id=WP_004848288.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4549925 4550788 . + . ID=gene-PHA56_RS21520;Name=tesB;gbkey=Gene;gene=tesB;gene_biotype=protein_coding;locus_tag=PHA56_RS21520;old_locus_tag=PHA56_21520 NZ_CP116214.1 Protein Homology CDS 4549925 4550788 . + 0 ID=cds-WP_189087284.1;Parent=gene-PHA56_RS21520;Dbxref=Genbank:WP_189087284.1;Name=WP_189087284.1;gbkey=CDS;gene=tesB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225457.1;locus_tag=PHA56_RS21520;product=acyl-CoA thioesterase II;protein_id=WP_189087284.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4550845 4552131 . - . ID=gene-PHA56_RS21525;Name=amtB;gbkey=Gene;gene=amtB;gene_biotype=protein_coding;locus_tag=PHA56_RS21525;old_locus_tag=PHA56_21525 NZ_CP116214.1 Protein Homology CDS 4550845 4552131 . - 0 ID=cds-WP_014837597.1;Parent=gene-PHA56_RS21525;Dbxref=Genbank:WP_014837597.1;Name=WP_014837597.1;Ontology_term=GO:0072488,GO:0008519,GO:0005886;gbkey=CDS;gene=amtB;go_component=plasma membrane|0005886||IEA;go_function=ammonium transmembrane transporter activity|0008519||IEA;go_process=ammonium transmembrane transport|0072488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225456.1;locus_tag=PHA56_RS21525;product=ammonium transporter AmtB;protein_id=WP_014837597.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4552165 4552503 . - . ID=gene-PHA56_RS21530;Name=glnK;gbkey=Gene;gene=glnK;gene_biotype=protein_coding;locus_tag=PHA56_RS21530;old_locus_tag=PHA56_21530 NZ_CP116214.1 Protein Homology CDS 4552165 4552503 . - 0 ID=cds-WP_004099573.1;Parent=gene-PHA56_RS21530;Dbxref=Genbank:WP_004099573.1;Name=WP_004099573.1;Ontology_term=GO:0006808,GO:0030234;gbkey=CDS;gene=glnK;go_function=enzyme regulator activity|0030234||IEA;go_process=regulation of nitrogen utilization|0006808||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015367937.1;locus_tag=PHA56_RS21530;product=P-II family nitrogen regulator;protein_id=WP_004099573.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4552517 4552747 . - . ID=gene-PHA56_RS21535;Name=PHA56_RS21535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS21535;old_locus_tag=PHA56_21535 NZ_CP116214.1 Protein Homology CDS 4552517 4552747 . - 0 ID=cds-WP_014837596.1;Parent=gene-PHA56_RS21535;Dbxref=Genbank:WP_014837596.1;Name=WP_014837596.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009653598.1;locus_tag=PHA56_RS21535;product=hypothetical protein;protein_id=WP_014837596.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4552747 4554525 . - . ID=gene-PHA56_RS21540;Name=PHA56_RS21540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS21540;old_locus_tag=PHA56_21540 NZ_CP116214.1 Protein Homology CDS 4552747 4554525 . - 0 ID=cds-WP_076752503.1;Parent=gene-PHA56_RS21540;Dbxref=Genbank:WP_076752503.1;Name=WP_076752503.1;Ontology_term=GO:0055085,GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225454.1;locus_tag=PHA56_RS21540;product=SmdB family multidrug efflux ABC transporter permease/ATP-binding protein;protein_id=WP_076752503.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4554518 4556290 . - . ID=gene-PHA56_RS21545;Name=PHA56_RS21545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS21545;old_locus_tag=PHA56_21545 NZ_CP116214.1 Protein Homology CDS 4554518 4556290 . - 0 ID=cds-WP_038424159.1;Parent=gene-PHA56_RS21545;Dbxref=Genbank:WP_038424159.1;Name=WP_038424159.1;Ontology_term=GO:0055085,GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014228187.1;locus_tag=PHA56_RS21545;product=SmdA family multidrug ABC transporter permease/ATP-binding protein;protein_id=WP_038424159.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4556333 4556791 . - . ID=gene-PHA56_RS21550;Name=PHA56_RS21550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS21550;old_locus_tag=PHA56_21550 NZ_CP116214.1 Protein Homology CDS 4556333 4556791 . - 0 ID=cds-WP_004135994.1;Parent=gene-PHA56_RS21550;Dbxref=Genbank:WP_004135994.1;Name=WP_004135994.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225452.1;locus_tag=PHA56_RS21550;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_004135994.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4556907 4557959 . + . ID=gene-PHA56_RS21555;Name=PHA56_RS21555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS21555;old_locus_tag=PHA56_21555 NZ_CP116214.1 Protein Homology CDS 4556907 4557959 . + 0 ID=cds-WP_038424158.1;Parent=gene-PHA56_RS21555;Dbxref=Genbank:WP_038424158.1;Name=WP_038424158.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225451.1;locus_tag=PHA56_RS21555;product=PLP-dependent cysteine synthase family protein;protein_id=WP_038424158.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4558006 4558824 . - . ID=gene-PHA56_RS21560;Name=cof;gbkey=Gene;gene=cof;gene_biotype=protein_coding;locus_tag=PHA56_RS21560;old_locus_tag=PHA56_21560 NZ_CP116214.1 Protein Homology CDS 4558006 4558824 . - 0 ID=cds-WP_014228185.1;Parent=gene-PHA56_RS21560;Dbxref=Genbank:WP_014228185.1;Name=WP_014228185.1;Ontology_term=GO:0016818;gbkey=CDS;gene=cof;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225450.1;locus_tag=PHA56_RS21560;product=HMP-PP phosphatase;protein_id=WP_014228185.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4558951 4560651 . + . ID=gene-PHA56_RS21565;Name=PHA56_RS21565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS21565;old_locus_tag=PHA56_21565 NZ_CP116214.1 Protein Homology CDS 4558951 4560651 . + 0 ID=cds-WP_014837592.1;Parent=gene-PHA56_RS21565;Dbxref=Genbank:WP_014837592.1;Name=WP_014837592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009653580.1;locus_tag=PHA56_RS21565;product=SgrR family transcriptional regulator;protein_id=WP_014837592.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4560718 4561413 . + . ID=gene-PHA56_RS21570;Name=queC;gbkey=Gene;gene=queC;gene_biotype=protein_coding;locus_tag=PHA56_RS21570;old_locus_tag=PHA56_21570 NZ_CP116214.1 Protein Homology CDS 4560718 4561413 . + 0 ID=cds-WP_014228183.1;Parent=gene-PHA56_RS21570;Dbxref=Genbank:WP_014228183.1;Name=WP_014228183.1;gbkey=CDS;gene=queC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706338.1;locus_tag=PHA56_RS21570;product=7-cyano-7-deazaguanine synthase QueC;protein_id=WP_014228183.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4561651 4562052 . - . ID=gene-PHA56_RS21575;Name=PHA56_RS21575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS21575;old_locus_tag=PHA56_21575 NZ_CP116214.1 Protein Homology CDS 4561651 4562052 . - 0 ID=cds-WP_004848264.1;Parent=gene-PHA56_RS21575;Dbxref=Genbank:WP_004848264.1;Name=WP_004848264.1;Ontology_term=GO:0047617;gbkey=CDS;go_function=acyl-CoA hydrolase activity|0047617||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225447.1;locus_tag=PHA56_RS21575;product=YbgC/FadM family acyl-CoA thioesterase;protein_id=WP_004848264.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4562163 4562528 . - . ID=gene-PHA56_RS21580;Name=PHA56_RS21580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS21580;old_locus_tag=PHA56_21580 NZ_CP116214.1 Protein Homology CDS 4562163 4562528 . - 0 ID=cds-WP_025107165.1;Parent=gene-PHA56_RS21580;Dbxref=Genbank:WP_025107165.1;Name=WP_025107165.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004223022.1;locus_tag=PHA56_RS21580;product=helix-hairpin-helix domain-containing protein;protein_id=WP_025107165.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4562677 4564551 . - . ID=gene-PHA56_RS21585;Name=ppiD;gbkey=Gene;gene=ppiD;gene_biotype=protein_coding;locus_tag=PHA56_RS21585;old_locus_tag=PHA56_21585 NZ_CP116214.1 Protein Homology CDS 4562677 4564551 . - 0 ID=cds-WP_038424156.1;Parent=gene-PHA56_RS21585;Dbxref=Genbank:WP_038424156.1;Name=WP_038424156.1;Ontology_term=GO:0003755;gbkey=CDS;gene=ppiD;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225445.1;locus_tag=PHA56_RS21585;product=peptidylprolyl isomerase;protein_id=WP_038424156.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4564765 4565037 . - . ID=gene-PHA56_RS21590;Name=hupB;gbkey=Gene;gene=hupB;gene_biotype=protein_coding;locus_tag=PHA56_RS21590;old_locus_tag=PHA56_21590 NZ_CP116214.1 Protein Homology CDS 4564765 4565037 . - 0 ID=cds-WP_002444653.1;Parent=gene-PHA56_RS21590;Dbxref=Genbank:WP_002444653.1;Name=WP_002444653.1;gbkey=CDS;gene=hupB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016535194.1;locus_tag=PHA56_RS21590;product=DNA-binding protein HU-beta;protein_id=WP_002444653.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4565246 4567600 . - . ID=gene-PHA56_RS21595;Name=lon;gbkey=Gene;gene=lon;gene_biotype=protein_coding;locus_tag=PHA56_RS21595;old_locus_tag=PHA56_21595 NZ_CP116214.1 Protein Homology CDS 4565246 4567600 . - 0 ID=cds-WP_004099539.1;Parent=gene-PHA56_RS21595;Dbxref=Genbank:WP_004099539.1;Name=WP_004099539.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0016887,GO:0043565;gbkey=CDS;gene=lon;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA,ATP hydrolysis activity|0016887||IEA,sequence-specific DNA binding|0043565||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001469947.1;locus_tag=PHA56_RS21595;product=endopeptidase La;protein_id=WP_004099539.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4567784 4569058 . - . ID=gene-PHA56_RS21600;Name=clpX;gbkey=Gene;gene=clpX;gene_biotype=protein_coding;locus_tag=PHA56_RS21600;old_locus_tag=PHA56_21600 NZ_CP116214.1 Protein Homology CDS 4567784 4569058 . - 0 ID=cds-WP_004099538.1;Parent=gene-PHA56_RS21600;Dbxref=Genbank:WP_004099538.1;Name=WP_004099538.1;Ontology_term=GO:0006508,GO:0004252,GO:0005524,GO:0051082,GO:0009368;gbkey=CDS;gene=clpX;go_component=endopeptidase Clp complex|0009368||IEA;go_function=serine-type endopeptidase activity|0004252||IEA,ATP binding|0005524||IEA,unfolded protein binding|0051082||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001396736.1;locus_tag=PHA56_RS21600;product=ATP-dependent protease ATP-binding subunit ClpX;protein_id=WP_004099538.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4569191 4569814 . - . ID=gene-PHA56_RS21605;Name=clpP;gbkey=Gene;gene=clpP;gene_biotype=protein_coding;locus_tag=PHA56_RS21605;old_locus_tag=PHA56_21605 NZ_CP116214.1 Protein Homology CDS 4569191 4569814 . - 0 ID=cds-WP_003021624.1;Parent=gene-PHA56_RS21605;Dbxref=Genbank:WP_003021624.1;Name=WP_003021624.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0009368;gbkey=CDS;gene=clpP;go_component=endopeptidase Clp complex|0009368||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006809880.1;locus_tag=PHA56_RS21605;product=ATP-dependent Clp endopeptidase proteolytic subunit ClpP;protein_id=WP_003021624.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4570130 4571428 . - . ID=gene-PHA56_RS21610;Name=tig;gbkey=Gene;gene=tig;gene_biotype=protein_coding;locus_tag=PHA56_RS21610;old_locus_tag=PHA56_21610 NZ_CP116214.1 Protein Homology CDS 4570130 4571428 . - 0 ID=cds-WP_004848255.1;Parent=gene-PHA56_RS21610;Dbxref=Genbank:WP_004848255.1;Name=WP_004848255.1;Ontology_term=GO:0051083,GO:0003755,GO:0051082,GO:0005854;gbkey=CDS;gene=tig;go_component=nascent polypeptide-associated complex|0005854||IEA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,unfolded protein binding|0051082||IEA;go_process='de novo' cotranslational protein folding|0051083||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001716227.1;locus_tag=PHA56_RS21610;product=trigger factor;protein_id=WP_004848255.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4571771 4572205 . - . ID=gene-PHA56_RS21615;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=PHA56_RS21615;old_locus_tag=PHA56_21615 NZ_CP116214.1 Protein Homology CDS 4571771 4572205 . - 0 ID=cds-WP_014228411.1-4;Parent=gene-PHA56_RS21615;Dbxref=Genbank:WP_014228411.1;Name=WP_014228411.1;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000525033.1;locus_tag=PHA56_RS21615;product=IS200/IS605 family transposase;protein_id=WP_014228411.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4572406 4572723 . - . ID=gene-PHA56_RS21620;Name=bolA;gbkey=Gene;gene=bolA;gene_biotype=protein_coding;locus_tag=PHA56_RS21620;old_locus_tag=PHA56_21620 NZ_CP116214.1 Protein Homology CDS 4572406 4572723 . - 0 ID=cds-WP_004133447.1;Parent=gene-PHA56_RS21620;Dbxref=Genbank:WP_004133447.1;Name=WP_004133447.1;gbkey=CDS;gene=bolA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225437.1;locus_tag=PHA56_RS21620;product=transcriptional regulator BolA;protein_id=WP_004133447.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4573029 4573607 . + . ID=gene-PHA56_RS21625;Name=PHA56_RS21625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS21625;old_locus_tag=PHA56_21625 NZ_CP116214.1 Protein Homology CDS 4573029 4573607 . + 0 ID=cds-WP_004848253.1;Parent=gene-PHA56_RS21625;Dbxref=Genbank:WP_004848253.1;Name=WP_004848253.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225436.1;locus_tag=PHA56_RS21625;product=lipoprotein;protein_id=WP_004848253.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4573653 4575128 . + . ID=gene-PHA56_RS21630;Name=ampG;gbkey=Gene;gene=ampG;gene_biotype=protein_coding;locus_tag=PHA56_RS21630;old_locus_tag=PHA56_21630 NZ_CP116214.1 Protein Homology CDS 4573653 4575128 . + 0 ID=cds-WP_014228180.1;Parent=gene-PHA56_RS21630;Dbxref=Genbank:WP_014228180.1;Name=WP_014228180.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=ampG;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225435.1;locus_tag=PHA56_RS21630;product=muropeptide MFS transporter AmpG;protein_id=WP_014228180.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4575609 4576556 . + . ID=gene-PHA56_RS21635;Name=cyoA;gbkey=Gene;gene=cyoA;gene_biotype=protein_coding;locus_tag=PHA56_RS21635;old_locus_tag=PHA56_21635 NZ_CP116214.1 Protein Homology CDS 4575609 4576556 . + 0 ID=cds-WP_014228179.1;Parent=gene-PHA56_RS21635;Dbxref=Genbank:WP_014228179.1;Name=WP_014228179.1;Ontology_term=GO:0022900,GO:0004129;gbkey=CDS;gene=cyoA;go_function=cytochrome-c oxidase activity|0004129||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414966.1;locus_tag=PHA56_RS21635;product=cytochrome o ubiquinol oxidase subunit II;protein_id=WP_014228179.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4576576 4578567 . + . ID=gene-PHA56_RS21640;Name=cyoB;gbkey=Gene;gene=cyoB;gene_biotype=protein_coding;locus_tag=PHA56_RS21640;old_locus_tag=PHA56_21640 NZ_CP116214.1 Protein Homology CDS 4576576 4578567 . + 0 ID=cds-WP_004129794.1;Parent=gene-PHA56_RS21640;Dbxref=Genbank:WP_004129794.1;Name=WP_004129794.1;Ontology_term=GO:0004129;gbkey=CDS;gene=cyoB;go_function=cytochrome-c oxidase activity|0004129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002444673.1;locus_tag=PHA56_RS21640;product=cytochrome o ubiquinol oxidase subunit I;protein_id=WP_004129794.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4578557 4579168 . + . ID=gene-PHA56_RS21645;Name=PHA56_RS21645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS21645;old_locus_tag=PHA56_21645 NZ_CP116214.1 Protein Homology CDS 4578557 4579168 . + 0 ID=cds-WP_004099525.1;Parent=gene-PHA56_RS21645;Dbxref=Genbank:WP_004099525.1;Name=WP_004099525.1;Ontology_term=GO:0022904,GO:0004129;gbkey=CDS;go_function=cytochrome-c oxidase activity|0004129||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414964.1;locus_tag=PHA56_RS21645;product=cytochrome o ubiquinol oxidase subunit III;protein_id=WP_004099525.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4579168 4579497 . + . ID=gene-PHA56_RS21650;Name=PHA56_RS21650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS21650;old_locus_tag=PHA56_21650 NZ_CP116214.1 Protein Homology CDS 4579168 4579497 . + 0 ID=cds-WP_004099523.1;Parent=gene-PHA56_RS21650;Dbxref=Genbank:WP_004099523.1;Name=WP_004099523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225431.1;locus_tag=PHA56_RS21650;product=cytochrome o ubiquinol oxidase subunit IV;protein_id=WP_004099523.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4579509 4580396 . + . ID=gene-PHA56_RS21655;Name=cyoE;gbkey=Gene;gene=cyoE;gene_biotype=protein_coding;locus_tag=PHA56_RS21655;old_locus_tag=PHA56_21655 NZ_CP116214.1 Protein Homology CDS 4579509 4580396 . + 0 ID=cds-WP_014837588.1;Parent=gene-PHA56_RS21655;Dbxref=Genbank:WP_014837588.1;Name=WP_014837588.1;Ontology_term=GO:0048034,GO:0008495,GO:0016020;gbkey=CDS;gene=cyoE;go_component=membrane|0016020||IEA;go_function=protoheme IX farnesyltransferase activity|0008495||IEA;go_process=heme O biosynthetic process|0048034||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225430.1;locus_tag=PHA56_RS21655;product=heme o synthase;protein_id=WP_014837588.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4581453 4581752 . + . ID=gene-PHA56_RS21660;Name=PHA56_RS21660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS21660;old_locus_tag=PHA56_21660 NZ_CP116214.1 Protein Homology CDS 4581453 4581752 . + 0 ID=cds-WP_014228178.1;Parent=gene-PHA56_RS21660;Dbxref=Genbank:WP_014228178.1;Name=WP_014228178.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014837587.1;locus_tag=PHA56_RS21660;product=hypothetical protein;protein_id=WP_014228178.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4581854 4582612 . - . ID=gene-PHA56_RS21665;Name=PHA56_RS21665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS21665;old_locus_tag=PHA56_21665 NZ_CP116214.1 Protein Homology CDS 4581854 4582612 . - 0 ID=cds-WP_014228177.1;Parent=gene-PHA56_RS21665;Dbxref=Genbank:WP_014228177.1;Name=WP_014228177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225428.1;locus_tag=PHA56_RS21665;product=IclR family transcriptional regulator C-terminal domain-containing protein;protein_id=WP_014228177.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4582766 4583587 . + . ID=gene-PHA56_RS21670;Name=PHA56_RS21670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS21670;old_locus_tag=PHA56_21670 NZ_CP116214.1 Protein Homology CDS 4582766 4583587 . + 0 ID=cds-WP_119834562.1;Parent=gene-PHA56_RS21670;Dbxref=Genbank:WP_119834562.1;Name=WP_119834562.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225427.1;locus_tag=PHA56_RS21670;product=shikimate dehydrogenase;protein_id=WP_119834562.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4583584 4585260 . + . ID=gene-PHA56_RS21675;Name=PHA56_RS21675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS21675;old_locus_tag=PHA56_21675 NZ_CP116214.1 Protein Homology CDS 4583584 4585260 . + 0 ID=cds-WP_119834563.1;Parent=gene-PHA56_RS21675;Dbxref=Genbank:WP_119834563.1;Name=WP_119834563.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004129771.1;locus_tag=PHA56_RS21675;product=FAD-dependent oxidoreductase;protein_id=WP_119834563.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4585274 4585594 . + . ID=gene-PHA56_RS21680;Name=PHA56_RS21680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS21680;old_locus_tag=PHA56_21680 NZ_CP116214.1 Protein Homology CDS 4585274 4585594 . + 0 ID=cds-WP_014228174.1;Parent=gene-PHA56_RS21680;Dbxref=Genbank:WP_014228174.1;Name=WP_014228174.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225425.1;locus_tag=PHA56_RS21680;product=NIPSNAP family protein;protein_id=WP_014228174.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4585605 4587308 . + . ID=gene-PHA56_RS21685;Name=PHA56_RS21685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS21685;old_locus_tag=PHA56_21685 NZ_CP116214.1 Protein Homology CDS 4585605 4587308 . + 0 ID=cds-WP_119834564.1;Parent=gene-PHA56_RS21685;Dbxref=Genbank:WP_119834564.1;Name=WP_119834564.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017146500.1;locus_tag=PHA56_RS21685;product=FAD-dependent oxidoreductase;protein_id=WP_119834564.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4587374 4588192 . + . ID=gene-PHA56_RS21690;Name=PHA56_RS21690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS21690;old_locus_tag=PHA56_21690 NZ_CP116214.1 Protein Homology CDS 4587374 4588192 . + 0 ID=cds-WP_119834565.1;Parent=gene-PHA56_RS21690;Dbxref=Genbank:WP_119834565.1;Name=WP_119834565.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225423.1;locus_tag=PHA56_RS21690;product=TIM barrel protein;protein_id=WP_119834565.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4588203 4589567 . + . ID=gene-PHA56_RS21695;Name=PHA56_RS21695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS21695;old_locus_tag=PHA56_21695 NZ_CP116214.1 Protein Homology CDS 4588203 4589567 . + 0 ID=cds-WP_014228171.1;Parent=gene-PHA56_RS21695;Dbxref=Genbank:WP_014228171.1;Name=WP_014228171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014228171.1;locus_tag=PHA56_RS21695;product=aromatic acid/H+ symport family MFS transporter;protein_id=WP_014228171.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4589975 4591375 . + . ID=gene-PHA56_RS21700;Name=PHA56_RS21700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS21700;old_locus_tag=PHA56_21700 NZ_CP116214.1 Protein Homology CDS 4589975 4591375 . + 0 ID=cds-WP_014837581.1;Parent=gene-PHA56_RS21700;Dbxref=Genbank:WP_014837581.1;Name=WP_014837581.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004111005.1;locus_tag=PHA56_RS21700;product=MFS transporter;protein_id=WP_014837581.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4591468 4592646 . + . ID=gene-PHA56_RS21705;Name=PHA56_RS21705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS21705;old_locus_tag=PHA56_21705 NZ_CP116214.1 Protein Homology CDS 4591468 4592646 . + 0 ID=cds-WP_014228169.1;Parent=gene-PHA56_RS21705;Dbxref=Genbank:WP_014228169.1;Name=WP_014228169.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017146503.1;locus_tag=PHA56_RS21705;product=Gfo/Idh/MocA family oxidoreductase;protein_id=WP_014228169.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4592802 4594166 . + . ID=gene-PHA56_RS21710;Name=PHA56_RS21710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS21710;old_locus_tag=PHA56_21710 NZ_CP116214.1 Protein Homology CDS 4592802 4594166 . + 0 ID=cds-WP_014228168.1;Parent=gene-PHA56_RS21710;Dbxref=Genbank:WP_014228168.1;Name=WP_014228168.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225420.1;locus_tag=PHA56_RS21710;product=MFS transporter;protein_id=WP_014228168.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4594270 4594761 . - . ID=gene-PHA56_RS21715;Name=PHA56_RS21715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS21715;old_locus_tag=PHA56_21715 NZ_CP116214.1 Protein Homology CDS 4594270 4594761 . - 0 ID=cds-WP_004129715.1;Parent=gene-PHA56_RS21715;Dbxref=Genbank:WP_004129715.1;Name=WP_004129715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965590.1;locus_tag=PHA56_RS21715;product=YajQ family cyclic di-GMP-binding protein;protein_id=WP_004129715.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4594904 4595815 . + . ID=gene-PHA56_RS21720;Name=panE;gbkey=Gene;gene=panE;gene_biotype=protein_coding;locus_tag=PHA56_RS21720;old_locus_tag=PHA56_21720 NZ_CP116214.1 Protein Homology CDS 4594904 4595815 . + 0 ID=cds-WP_004848223.1;Parent=gene-PHA56_RS21720;Dbxref=Genbank:WP_004848223.1;Name=WP_004848223.1;Ontology_term=GO:0015940,GO:0008677;gbkey=CDS;gene=panE;go_function=2-dehydropantoate 2-reductase activity|0008677||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225418.1;locus_tag=PHA56_RS21720;product=2-dehydropantoate 2-reductase;protein_id=WP_004848223.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4595778 4596368 . + . ID=gene-PHA56_RS21725;Name=yajL;gbkey=Gene;gene=yajL;gene_biotype=protein_coding;locus_tag=PHA56_RS21725;old_locus_tag=PHA56_21725 NZ_CP116214.1 Protein Homology CDS 4595778 4596368 . + 0 ID=cds-WP_014228167.1;Parent=gene-PHA56_RS21725;Dbxref=Genbank:WP_014228167.1;Name=WP_014228167.1;gbkey=CDS;gene=yajL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459428.1;locus_tag=PHA56_RS21725;product=protein deglycase YajL;protein_id=WP_014228167.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4596426 4597874 . - . ID=gene-PHA56_RS21730;Name=thiI;gbkey=Gene;gene=thiI;gene_biotype=protein_coding;locus_tag=PHA56_RS21730;old_locus_tag=PHA56_21730 NZ_CP116214.1 Protein Homology CDS 4596426 4597874 . - 0 ID=cds-WP_014228166.1;Parent=gene-PHA56_RS21730;Dbxref=Genbank:WP_014228166.1;Name=WP_014228166.1;Ontology_term=GO:0006400,GO:0009228,GO:0003824;gbkey=CDS;gene=thiI;go_function=catalytic activity|0003824||IEA;go_process=tRNA modification|0006400||IEA,thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014168857.1;locus_tag=PHA56_RS21730;product=tRNA 4-thiouridine(8) synthase ThiI;protein_id=WP_014228166.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4598073 4598315 . + . ID=gene-PHA56_RS21735;Name=xseB;gbkey=Gene;gene=xseB;gene_biotype=protein_coding;locus_tag=PHA56_RS21735;old_locus_tag=PHA56_21735 NZ_CP116214.1 Protein Homology CDS 4598073 4598315 . + 0 ID=cds-WP_004099468.1;Parent=gene-PHA56_RS21735;Dbxref=Genbank:WP_004099468.1;Name=WP_004099468.1;gbkey=CDS;gene=xseB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225414.1;locus_tag=PHA56_RS21735;product=exodeoxyribonuclease VII small subunit;protein_id=WP_004099468.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4598316 4599215 . + . ID=gene-PHA56_RS21740;Name=ispA;gbkey=Gene;gene=ispA;gene_biotype=protein_coding;locus_tag=PHA56_RS21740;old_locus_tag=PHA56_21740 NZ_CP116214.1 Protein Homology CDS 4598316 4599215 . + 0 ID=cds-WP_004848218.1;Parent=gene-PHA56_RS21740;Dbxref=Genbank:WP_004848218.1;Name=WP_004848218.1;Ontology_term=GO:0008299;gbkey=CDS;gene=ispA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225413.1;locus_tag=PHA56_RS21740;product=(2E%2C6E)-farnesyl diphosphate synthase;protein_id=WP_004848218.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4599234 4601096 . + . ID=gene-PHA56_RS21745;Name=dxs;gbkey=Gene;gene=dxs;gene_biotype=protein_coding;locus_tag=PHA56_RS21745;old_locus_tag=PHA56_21745 NZ_CP116214.1 Protein Homology CDS 4599234 4601096 . + 0 ID=cds-WP_004129698.1;Parent=gene-PHA56_RS21745;Dbxref=Genbank:WP_004129698.1;Name=WP_004129698.1;Ontology_term=GO:0008615,GO:0009228,GO:0009240,GO:0008661,GO:0005737;gbkey=CDS;gene=dxs;go_component=cytoplasm|0005737||IEA;go_function=1-deoxy-D-xylulose-5-phosphate synthase activity|0008661||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA,thiamine biosynthetic process|0009228||IEA,isopentenyl diphosphate biosynthetic process|0009240||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225412.1;locus_tag=PHA56_RS21745;product=1-deoxy-D-xylulose-5-phosphate synthase;protein_id=WP_004129698.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4601157 4602131 . + . ID=gene-PHA56_RS21750;Name=PHA56_RS21750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS21750;old_locus_tag=PHA56_21750 NZ_CP116214.1 Protein Homology CDS 4601157 4602131 . + 0 ID=cds-WP_014837578.1;Parent=gene-PHA56_RS21750;Dbxref=Genbank:WP_014837578.1;Name=WP_014837578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225411.1;locus_tag=PHA56_RS21750;product=aldo/keto reductase;protein_id=WP_014837578.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4602321 4602788 . - . ID=gene-PHA56_RS21755;Name=pgpA;gbkey=Gene;gene=pgpA;gene_biotype=protein_coding;locus_tag=PHA56_RS21755;old_locus_tag=PHA56_21755 NZ_CP116214.1 Protein Homology CDS 4602321 4602788 . - 0 ID=cds-WP_029669799.1;Parent=gene-PHA56_RS21755;Dbxref=Genbank:WP_029669799.1;Name=WP_029669799.1;Ontology_term=GO:0006629,GO:0008962;gbkey=CDS;gene=pgpA;go_function=phosphatidylglycerophosphatase activity|0008962||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014837577.1;locus_tag=PHA56_RS21755;product=phosphatidylglycerophosphatase A;protein_id=WP_029669799.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4602817 4603791 . - . ID=gene-PHA56_RS21760;Name=thiL;gbkey=Gene;gene=thiL;gene_biotype=protein_coding;locus_tag=PHA56_RS21760;old_locus_tag=PHA56_21760 NZ_CP116214.1 Protein Homology CDS 4602817 4603791 . - 0 ID=cds-WP_014228164.1;Parent=gene-PHA56_RS21760;Dbxref=Genbank:WP_014228164.1;Name=WP_014228164.1;Ontology_term=GO:0009228,GO:0009030;gbkey=CDS;gene=thiL;go_function=thiamine-phosphate kinase activity|0009030||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004858626.1;locus_tag=PHA56_RS21760;product=thiamine-phosphate kinase;protein_id=WP_014228164.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4603867 4604286 . - . ID=gene-PHA56_RS21765;Name=nusB;gbkey=Gene;gene=nusB;gene_biotype=protein_coding;locus_tag=PHA56_RS21765;old_locus_tag=PHA56_21765 NZ_CP116214.1 Protein Homology CDS 4603867 4604286 . - 0 ID=cds-WP_004099457.1;Parent=gene-PHA56_RS21765;Dbxref=Genbank:WP_004099457.1;Name=WP_004099457.1;Ontology_term=GO:0006355;gbkey=CDS;gene=nusB;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459413.1;locus_tag=PHA56_RS21765;product=transcription antitermination factor NusB;protein_id=WP_004099457.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4604306 4604776 . - . ID=gene-PHA56_RS21770;Name=ribE;gbkey=Gene;gene=ribE;gene_biotype=protein_coding;locus_tag=PHA56_RS21770;old_locus_tag=PHA56_21770 NZ_CP116214.1 Protein Homology CDS 4604306 4604776 . - 0 ID=cds-WP_004129690.1;Parent=gene-PHA56_RS21770;Dbxref=Genbank:WP_004129690.1;Name=WP_004129690.1;Ontology_term=GO:0000906,GO:0009349;gbkey=CDS;gene=ribE;go_component=riboflavin synthase complex|0009349||IEA;go_function=6%2C7-dimethyl-8-ribityllumazine synthase activity|0000906||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818760.1;locus_tag=PHA56_RS21770;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=WP_004129690.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4604870 4605973 . - . ID=gene-PHA56_RS21775;Name=ribD;gbkey=Gene;gene=ribD;gene_biotype=protein_coding;locus_tag=PHA56_RS21775;old_locus_tag=PHA56_21775 NZ_CP116214.1 Protein Homology CDS 4604870 4605973 . - 0 ID=cds-WP_038424154.1;Parent=gene-PHA56_RS21775;Dbxref=Genbank:WP_038424154.1;Name=WP_038424154.1;Ontology_term=GO:0008270,GO:0008703,GO:0008835,GO:0050661;gbkey=CDS;gene=ribD;go_function=zinc ion binding|0008270||IEA,5-amino-6-(5-phosphoribosylamino)uracil reductase activity|0008703||IEA,diaminohydroxyphosphoribosylaminopyrimidine deaminase activity|0008835||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225406.1;locus_tag=PHA56_RS21775;product=bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD;protein_id=WP_038424154.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4605978 4606427 . - . ID=gene-PHA56_RS21780;Name=nrdR;gbkey=Gene;gene=nrdR;gene_biotype=protein_coding;locus_tag=PHA56_RS21780;old_locus_tag=PHA56_21780 NZ_CP116214.1 Protein Homology CDS 4605978 4606427 . - 0 ID=cds-WP_014228162.1;Parent=gene-PHA56_RS21780;Dbxref=Genbank:WP_014228162.1;Name=WP_014228162.1;Ontology_term=GO:0006355,GO:0140110;gbkey=CDS;gene=nrdR;go_function=transcription regulator activity|0140110||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017458860.1;locus_tag=PHA56_RS21780;product=transcriptional regulator NrdR;protein_id=WP_014228162.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4606575 4607117 . + . ID=gene-PHA56_RS21785;Name=PHA56_RS21785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS21785;old_locus_tag=PHA56_21785 NZ_CP116214.1 Protein Homology CDS 4606575 4607117 . + 0 ID=cds-WP_004848204.1;Parent=gene-PHA56_RS21785;Dbxref=Genbank:WP_004848204.1;Name=WP_004848204.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004848204.1;locus_tag=PHA56_RS21785;product=DUF3251 domain-containing protein;protein_id=WP_004848204.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4607414 4608298 . + . ID=gene-PHA56_RS21790;Name=PHA56_RS21790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS21790;old_locus_tag=PHA56_21790 NZ_CP116214.1 Protein Homology CDS 4607414 4608298 . + 0 ID=cds-WP_004848202.1;Parent=gene-PHA56_RS21790;Dbxref=Genbank:WP_004848202.1;Name=WP_004848202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225403.1;locus_tag=PHA56_RS21790;product=nucleoside-specific channel-forming protein Tsx;protein_id=WP_004848202.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4608342 4609031 . - . ID=gene-PHA56_RS21795;Name=PHA56_RS21795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS21795;old_locus_tag=PHA56_21795 NZ_CP116214.1 Protein Homology CDS 4608342 4609031 . - 0 ID=cds-WP_014228161.1;Parent=gene-PHA56_RS21795;Dbxref=Genbank:WP_014228161.1;Name=WP_014228161.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004133947.1;locus_tag=PHA56_RS21795;product=YafY family protein;protein_id=WP_014228161.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4609046 4609411 . - . ID=gene-PHA56_RS21800;Name=PHA56_RS21800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS21800;old_locus_tag=PHA56_21800 NZ_CP116214.1 Protein Homology CDS 4609046 4609411 . - 0 ID=cds-WP_014837574.1;Parent=gene-PHA56_RS21800;Dbxref=Genbank:WP_014837574.1;Name=WP_014837574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225401.1;locus_tag=PHA56_RS21800;product=VOC family protein;protein_id=WP_014837574.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4609476 4610867 . - . ID=gene-PHA56_RS21805;Name=PHA56_RS21805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS21805;old_locus_tag=PHA56_21805 NZ_CP116214.1 Protein Homology CDS 4609476 4610867 . - 0 ID=cds-WP_014837573.1;Parent=gene-PHA56_RS21805;Dbxref=Genbank:WP_014837573.1;Name=WP_014837573.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004129673.1;locus_tag=PHA56_RS21805;product=M24 family metallopeptidase;protein_id=WP_014837573.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4610984 4611955 . - . ID=gene-PHA56_RS21810;Name=secF;gbkey=Gene;gene=secF;gene_biotype=protein_coding;locus_tag=PHA56_RS21810;old_locus_tag=PHA56_21810 NZ_CP116214.1 Protein Homology CDS 4610984 4611955 . - 0 ID=cds-WP_004848195.1;Parent=gene-PHA56_RS21810;Dbxref=Genbank:WP_004848195.1;Name=WP_004848195.1;Ontology_term=GO:0043952,GO:0015450,GO:0031522;gbkey=CDS;gene=secF;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225400.1;locus_tag=PHA56_RS21810;product=protein translocase subunit SecF;protein_id=WP_004848195.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4611966 4613813 . - . ID=gene-PHA56_RS21815;Name=secD;gbkey=Gene;gene=secD;gene_biotype=protein_coding;locus_tag=PHA56_RS21815;old_locus_tag=PHA56_21815 NZ_CP116214.1 Protein Homology CDS 4611966 4613813 . - 0 ID=cds-WP_071886312.1;Parent=gene-PHA56_RS21815;Dbxref=Genbank:WP_071886312.1;Name=WP_071886312.1;Ontology_term=GO:0043952,GO:0015450,GO:0031522;gbkey=CDS;gene=secD;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125127.1;locus_tag=PHA56_RS21815;product=protein translocase subunit SecD;protein_id=WP_071886312.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4613841 4614173 . - . ID=gene-PHA56_RS21820;Name=yajC;gbkey=Gene;gene=yajC;gene_biotype=protein_coding;locus_tag=PHA56_RS21820;old_locus_tag=PHA56_21820 NZ_CP116214.1 Protein Homology CDS 4613841 4614173 . - 0 ID=cds-WP_004099423.1;Parent=gene-PHA56_RS21820;Dbxref=Genbank:WP_004099423.1;Name=WP_004099423.1;Ontology_term=GO:0009306,GO:0015450,GO:0005886;gbkey=CDS;gene=yajC;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000007628.1;locus_tag=PHA56_RS21820;product=preprotein translocase subunit YajC;protein_id=WP_004099423.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4614196 4615323 . - . ID=gene-PHA56_RS21825;Name=tgt;gbkey=Gene;gene=tgt;gene_biotype=protein_coding;locus_tag=PHA56_RS21825;old_locus_tag=PHA56_21825 NZ_CP116214.1 Protein Homology CDS 4614196 4615323 . - 0 ID=cds-WP_004129667.1;Parent=gene-PHA56_RS21825;Dbxref=Genbank:WP_004129667.1;Name=WP_004129667.1;Ontology_term=GO:0006400,GO:0008479,GO:0005737;gbkey=CDS;gene=tgt;go_component=cytoplasm|0005737||IEA;go_function=queuine tRNA-ribosyltransferase activity|0008479||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904808.1;locus_tag=PHA56_RS21825;product=tRNA guanosine(34) transglycosylase Tgt;protein_id=WP_004129667.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4615433 4616497 . - . ID=gene-PHA56_RS21830;Name=queA;gbkey=Gene;gene=queA;gene_biotype=protein_coding;locus_tag=PHA56_RS21830;old_locus_tag=PHA56_21830 NZ_CP116214.1 Protein Homology CDS 4615433 4616497 . - 0 ID=cds-WP_014837571.1;Parent=gene-PHA56_RS21830;Dbxref=Genbank:WP_014837571.1;Name=WP_014837571.1;Ontology_term=GO:0006400,GO:0008616,GO:0051075,GO:0005737;gbkey=CDS;gene=queA;go_component=cytoplasm|0005737||IEA;go_function=S-adenosylmethionine:tRNA ribosyltransferase-isomerase activity|0051075||IEA;go_process=tRNA modification|0006400||IEA,queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459399.1;locus_tag=PHA56_RS21830;product=tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA;protein_id=WP_014837571.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4616589 4617170 . + . ID=gene-PHA56_RS21835;Name=acpH;gbkey=Gene;gene=acpH;gene_biotype=protein_coding;locus_tag=PHA56_RS21835;old_locus_tag=PHA56_21835 NZ_CP116214.1 Protein Homology CDS 4616589 4617170 . + 0 ID=cds-WP_014228156.1;Parent=gene-PHA56_RS21835;Dbxref=Genbank:WP_014228156.1;Name=WP_014228156.1;Ontology_term=GO:0006633,GO:0008770;gbkey=CDS;gene=acpH;go_function=[acyl-carrier-protein] phosphodiesterase activity|0008770||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225394.1;locus_tag=PHA56_RS21835;product=ACP phosphodiesterase;protein_id=WP_014228156.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4617341 4617943 . + . ID=gene-PHA56_RS21840;Name=PHA56_RS21840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS21840;old_locus_tag=PHA56_21840 NZ_CP116214.1 Protein Homology CDS 4617341 4617943 . + 0 ID=cds-WP_004099418.1;Parent=gene-PHA56_RS21840;Dbxref=Genbank:WP_004099418.1;Name=WP_004099418.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225393.1;locus_tag=PHA56_RS21840;product=peroxiredoxin;protein_id=WP_004099418.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4617991 4619385 . - . ID=gene-PHA56_RS21845;Name=PHA56_RS21845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS21845;old_locus_tag=PHA56_21845 NZ_CP116214.1 Protein Homology CDS 4617991 4619385 . - 0 ID=cds-WP_014837570.1;Parent=gene-PHA56_RS21845;Dbxref=Genbank:WP_014837570.1;Name=WP_014837570.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014837570.1;locus_tag=PHA56_RS21845;product=DUF3999 domain-containing protein;protein_id=WP_014837570.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4619382 4622039 . - . ID=gene-PHA56_RS21850;Name=PHA56_RS21850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS21850;old_locus_tag=PHA56_21850 NZ_CP116214.1 Protein Homology CDS 4619382 4622039 . - 0 ID=cds-WP_038424153.1;Parent=gene-PHA56_RS21850;Dbxref=Genbank:WP_038424153.1;Name=WP_038424153.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006809919.1;locus_tag=PHA56_RS21850;product=DUF2339 domain-containing protein;protein_id=WP_038424153.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4622176 4624044 . - . ID=gene-PHA56_RS21855;Name=PHA56_RS21855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS21855;old_locus_tag=PHA56_21855 NZ_CP116214.1 Protein Homology CDS 4622176 4624044 . - 0 ID=cds-WP_014228153.1;Parent=gene-PHA56_RS21855;Dbxref=Genbank:WP_014228153.1;Name=WP_014228153.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225386.1;locus_tag=PHA56_RS21855;product=amidohydrolase;protein_id=WP_014228153.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4624069 4624614 . - . ID=gene-PHA56_RS21860;Name=PHA56_RS21860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS21860;old_locus_tag=PHA56_21860 NZ_CP116214.1 Protein Homology CDS 4624069 4624614 . - 0 ID=cds-WP_014228152.1;Parent=gene-PHA56_RS21860;Dbxref=Genbank:WP_014228152.1;Name=WP_014228152.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225385.1;locus_tag=PHA56_RS21860;product=antibiotic biosynthesis monooxygenase;protein_id=WP_014228152.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4624751 4625392 . - . ID=gene-PHA56_RS21865;Name=PHA56_RS21865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS21865;old_locus_tag=PHA56_21865 NZ_CP116214.1 Protein Homology CDS 4624751 4625392 . - 0 ID=cds-WP_004848179.1;Parent=gene-PHA56_RS21865;Dbxref=Genbank:WP_004848179.1;Name=WP_004848179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225384.1;locus_tag=PHA56_RS21865;product=hydrolase;protein_id=WP_004848179.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4625684 4626586 . + . ID=gene-PHA56_RS21870;Name=PHA56_RS21870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS21870;old_locus_tag=PHA56_21870 NZ_CP116214.1 Protein Homology CDS 4625684 4626586 . + 0 ID=cds-WP_014228151.1;Parent=gene-PHA56_RS21870;Dbxref=Genbank:WP_014228151.1;Name=WP_014228151.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004129645.1;locus_tag=PHA56_RS21870;product=LysR family transcriptional regulator;protein_id=WP_014228151.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4626583 4628400 . - . ID=gene-PHA56_RS21875;Name=malZ;gbkey=Gene;gene=malZ;gene_biotype=protein_coding;locus_tag=PHA56_RS21875;old_locus_tag=PHA56_21875 NZ_CP116214.1 Protein Homology CDS 4626583 4628400 . - 0 ID=cds-WP_014837567.1;Parent=gene-PHA56_RS21875;Dbxref=Genbank:WP_014837567.1;Name=WP_014837567.1;Ontology_term=GO:0005975,GO:0004558;gbkey=CDS;gene=malZ;go_function=alpha-1%2C4-glucosidase activity|0004558||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225382.1;locus_tag=PHA56_RS21875;product=maltodextrin glucosidase;protein_id=WP_014837567.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4628558 4629928 . - . ID=gene-PHA56_RS21880;Name=proY;gbkey=Gene;gene=proY;gene_biotype=protein_coding;locus_tag=PHA56_RS21880;old_locus_tag=PHA56_21880 NZ_CP116214.1 Protein Homology CDS 4628558 4629928 . - 0 ID=cds-WP_014228149.1;Parent=gene-PHA56_RS21880;Dbxref=Genbank:WP_014228149.1;Name=WP_014228149.1;Ontology_term=GO:0006865,GO:0055085,GO:0016020;gbkey=CDS;gene=proY;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459395.1;locus_tag=PHA56_RS21880;product=proline-specific permease ProY;protein_id=WP_014228149.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4630052 4631371 . - . ID=gene-PHA56_RS21885;Name=brnQ;gbkey=Gene;gene=brnQ;gene_biotype=protein_coding;locus_tag=PHA56_RS21885;old_locus_tag=PHA56_21885 NZ_CP116214.1 Protein Homology CDS 4630052 4631371 . - 0 ID=cds-WP_014228148.1;Parent=gene-PHA56_RS21885;Dbxref=Genbank:WP_014228148.1;Name=WP_014228148.1;gbkey=CDS;gene=brnQ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225380.1;locus_tag=PHA56_RS21885;product=branched-chain amino acid transporter carrier protein BrnQ;protein_id=WP_014228148.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4631790 4633079 . - . ID=gene-PHA56_RS21890;Name=phoR;gbkey=Gene;gene=phoR;gene_biotype=protein_coding;locus_tag=PHA56_RS21890;old_locus_tag=PHA56_21890 NZ_CP116214.1 Protein Homology CDS 4631790 4633079 . - 0 ID=cds-WP_004848171.1;Parent=gene-PHA56_RS21890;Dbxref=Genbank:WP_004848171.1;Name=WP_004848171.1;Ontology_term=GO:0000160,GO:0006355,GO:0016310,GO:0000155,GO:0004721,GO:0016020;gbkey=CDS;gene=phoR;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,phosphoprotein phosphatase activity|0004721||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016808643.1;locus_tag=PHA56_RS21890;product=phosphate regulon sensor histidine kinase PhoR;protein_id=WP_004848171.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4633101 4633790 . - . ID=gene-PHA56_RS21895;Name=phoB;gbkey=Gene;gene=phoB;gene_biotype=protein_coding;locus_tag=PHA56_RS21895;old_locus_tag=PHA56_21895 NZ_CP116214.1 Protein Homology CDS 4633101 4633790 . - 0 ID=cds-WP_004099401.1;Parent=gene-PHA56_RS21895;Dbxref=Genbank:WP_004099401.1;Name=WP_004099401.1;gbkey=CDS;gene=phoB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000113934.1;locus_tag=PHA56_RS21895;product=phosphate response regulator transcription factor PhoB;protein_id=WP_004099401.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4634070 4635272 . + . ID=gene-PHA56_RS21900;Name=sbcD;gbkey=Gene;gene=sbcD;gene_biotype=protein_coding;locus_tag=PHA56_RS21900;old_locus_tag=PHA56_21900 NZ_CP116214.1 Protein Homology CDS 4634070 4635272 . + 0 ID=cds-WP_014228147.1;Parent=gene-PHA56_RS21900;Dbxref=Genbank:WP_014228147.1;Name=WP_014228147.1;Ontology_term=GO:0006259,GO:0008408;gbkey=CDS;gene=sbcD;go_function=3'-5' exonuclease activity|0008408||IEA;go_process=DNA metabolic process|0006259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014228147.1;locus_tag=PHA56_RS21900;product=exonuclease subunit SbcD;protein_id=WP_014228147.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4635269 4638403 . + . ID=gene-PHA56_RS21905;Name=sbcC;gbkey=Gene;gene=sbcC;gene_biotype=protein_coding;locus_tag=PHA56_RS21905;old_locus_tag=PHA56_21905 NZ_CP116214.1 Protein Homology CDS 4635269 4638403 . + 0 ID=cds-WP_038424144.1;Parent=gene-PHA56_RS21905;Dbxref=Genbank:WP_038424144.1;Name=WP_038424144.1;gbkey=CDS;gene=sbcC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004129632.1;locus_tag=PHA56_RS21905;product=exonuclease subunit SbcC;protein_id=WP_038424144.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4638693 4639055 . + . ID=gene-PHA56_RS21910;Name=PHA56_RS21910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS21910;old_locus_tag=PHA56_21910 NZ_CP116214.1 Protein Homology CDS 4638693 4639055 . + 0 ID=cds-WP_038424142.1;Parent=gene-PHA56_RS21910;Dbxref=Genbank:WP_038424142.1;Name=WP_038424142.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004110968.1;locus_tag=PHA56_RS21910;product=NUDIX hydrolase;protein_id=WP_038424142.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4639104 4640009 . - . ID=gene-PHA56_RS21915;Name=mak;gbkey=Gene;gene=mak;gene_biotype=protein_coding;locus_tag=PHA56_RS21915;old_locus_tag=PHA56_21915 NZ_CP116214.1 Protein Homology CDS 4639104 4640009 . - 0 ID=cds-WP_014228144.1;Parent=gene-PHA56_RS21915;Dbxref=Genbank:WP_014228144.1;Name=WP_014228144.1;gbkey=CDS;gene=mak;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020079509.1;locus_tag=PHA56_RS21915;product=fructokinase;protein_id=WP_014228144.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4640100 4641011 . + . ID=gene-PHA56_RS21920;Name=rdgC;gbkey=Gene;gene=rdgC;gene_biotype=protein_coding;locus_tag=PHA56_RS21920;old_locus_tag=PHA56_21920 NZ_CP116214.1 Protein Homology CDS 4640100 4641011 . + 0 ID=cds-WP_004099396.1;Parent=gene-PHA56_RS21920;Dbxref=Genbank:WP_004099396.1;Name=WP_004099396.1;Ontology_term=GO:0006310;gbkey=CDS;gene=rdgC;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120935.1;locus_tag=PHA56_RS21920;product=recombination-associated protein RdgC;protein_id=WP_004099396.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4641054 4641338 . - . ID=gene-PHA56_RS21925;Name=ppnP;gbkey=Gene;gene=ppnP;gene_biotype=protein_coding;locus_tag=PHA56_RS21925;old_locus_tag=PHA56_21925 NZ_CP116214.1 Protein Homology CDS 4641054 4641338 . - 0 ID=cds-WP_004099395.1;Parent=gene-PHA56_RS21925;Dbxref=Genbank:WP_004099395.1;Name=WP_004099395.1;gbkey=CDS;gene=ppnP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225373.1;locus_tag=PHA56_RS21925;product=pyrimidine/purine nucleoside phosphorylase;protein_id=WP_004099395.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4641426 4642106 . - . ID=gene-PHA56_RS21930;Name=PHA56_RS21930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS21930;old_locus_tag=PHA56_21930 NZ_CP116214.1 Protein Homology CDS 4641426 4642106 . - 0 ID=cds-WP_171817009.1;Parent=gene-PHA56_RS21930;Dbxref=Genbank:WP_171817009.1;Name=WP_171817009.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012737484.1;locus_tag=PHA56_RS21930;product=AroM family protein;protein_id=WP_171817009.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4642359 4642550 . - . ID=gene-PHA56_RS21935;Name=PHA56_RS21935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS21935;old_locus_tag=PHA56_21935 NZ_CP116214.1 Protein Homology CDS 4642359 4642550 . - 0 ID=cds-WP_004129622.1;Parent=gene-PHA56_RS21935;Dbxref=Genbank:WP_004129622.1;Name=WP_004129622.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459384.1;locus_tag=PHA56_RS21935;product=YaiA family protein;protein_id=WP_004129622.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4642622 4643149 . - . ID=gene-PHA56_RS21940;Name=aroL;gbkey=Gene;gene=aroL;gene_biotype=protein_coding;locus_tag=PHA56_RS21940;old_locus_tag=PHA56_21940 NZ_CP116214.1 Protein Homology CDS 4642622 4643149 . - 0 ID=cds-WP_004848163.1;Parent=gene-PHA56_RS21940;Dbxref=Genbank:WP_004848163.1;Name=WP_004848163.1;Ontology_term=GO:0009073,GO:0004765;gbkey=CDS;gene=aroL;go_function=shikimate kinase activity|0004765||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004099392.1;locus_tag=PHA56_RS21940;product=shikimate kinase AroL;protein_id=WP_004848163.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4643484 4644182 . + . ID=gene-PHA56_RS21945;Name=PHA56_RS21945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS21945;old_locus_tag=PHA56_21945 NZ_CP116214.1 Protein Homology CDS 4643484 4644182 . + 0 ID=cds-WP_014228142.1;Parent=gene-PHA56_RS21945;Dbxref=Genbank:WP_014228142.1;Name=WP_014228142.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225369.1;locus_tag=PHA56_RS21945;product=DUF2076 domain-containing protein;protein_id=WP_014228142.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4644179 4644637 . - . ID=gene-PHA56_RS21950;Name=PHA56_RS21950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS21950;old_locus_tag=PHA56_21950 NZ_CP116214.1 Protein Homology CDS 4644179 4644637 . - 0 ID=cds-WP_009653579.1;Parent=gene-PHA56_RS21950;Dbxref=Genbank:WP_009653579.1;Name=WP_009653579.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225368.1;locus_tag=PHA56_RS21950;product=YaiI/YqxD family protein;protein_id=WP_009653579.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4644754 4645563 . + . ID=gene-PHA56_RS21955;Name=proC;gbkey=Gene;gene=proC;gene_biotype=protein_coding;locus_tag=PHA56_RS21955;old_locus_tag=PHA56_21955 NZ_CP116214.1 Protein Homology CDS 4644754 4645563 . + 0 ID=cds-WP_004848157.1;Parent=gene-PHA56_RS21955;Dbxref=Genbank:WP_004848157.1;Name=WP_004848157.1;Ontology_term=GO:0006561,GO:0004735;gbkey=CDS;gene=proC;go_function=pyrroline-5-carboxylate reductase activity|0004735||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225367.1;locus_tag=PHA56_RS21955;product=pyrroline-5-carboxylate reductase;protein_id=WP_004848157.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4645610 4645930 . - . ID=gene-PHA56_RS21960;Name=psiF;gbkey=Gene;gene=psiF;gene_biotype=protein_coding;locus_tag=PHA56_RS21960;old_locus_tag=PHA56_21960 NZ_CP116214.1 Protein Homology CDS 4645610 4645930 . - 0 ID=cds-WP_004132478.1;Parent=gene-PHA56_RS21960;Dbxref=Genbank:WP_004132478.1;Name=WP_004132478.1;gbkey=CDS;gene=psiF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017146531.1;locus_tag=PHA56_RS21960;product=phosphate starvation-inducible protein PsiF;protein_id=WP_004132478.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4646021 4647442 . - . ID=gene-PHA56_RS21965;Name=phoA;gbkey=Gene;gene=phoA;gene_biotype=protein_coding;locus_tag=PHA56_RS21965;old_locus_tag=PHA56_21965 NZ_CP116214.1 Protein Homology CDS 4646021 4647442 . - 0 ID=cds-WP_171817015.1;Parent=gene-PHA56_RS21965;Dbxref=Genbank:WP_171817015.1;Name=WP_171817015.1;Ontology_term=GO:0016791;gbkey=CDS;gene=phoA;go_function=phosphatase activity|0016791||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020456719.1;locus_tag=PHA56_RS21965;product=alkaline phosphatase;protein_id=WP_171817015.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4647540 4647800 . - . ID=gene-PHA56_RS21970;Name=iraP;gbkey=Gene;gene=iraP;gene_biotype=protein_coding;locus_tag=PHA56_RS21970;old_locus_tag=PHA56_21970 NZ_CP116214.1 Protein Homology CDS 4647540 4647800 . - 0 ID=cds-WP_014228140.1;Parent=gene-PHA56_RS21970;Dbxref=Genbank:WP_014228140.1;Name=WP_014228140.1;gbkey=CDS;gene=iraP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225364.1;locus_tag=PHA56_RS21970;product=anti-adapter protein IraP;protein_id=WP_014228140.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4648029 4649021 . - . ID=gene-PHA56_RS21975;Name=PHA56_RS21975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS21975;old_locus_tag=PHA56_21975 NZ_CP116214.1 Protein Homology CDS 4648029 4649021 . - 0 ID=cds-WP_014228139.1;Parent=gene-PHA56_RS21975;Dbxref=Genbank:WP_014228139.1;Name=WP_014228139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004099384.1;locus_tag=PHA56_RS21975;product=substrate-binding domain-containing protein;protein_id=WP_014228139.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4649088 4650374 . - . ID=gene-PHA56_RS21980;Name=PHA56_RS21980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS21980;old_locus_tag=PHA56_21980 NZ_CP116214.1 Protein Homology CDS 4649088 4650374 . - 0 ID=cds-WP_032748202.1;Parent=gene-PHA56_RS21980;Dbxref=Genbank:WP_032748202.1;Name=WP_032748202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004099383.1;locus_tag=PHA56_RS21980;product=MFS transporter;protein_id=WP_032748202.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4650469 4651233 . - . ID=gene-PHA56_RS21985;Name=idnO;gbkey=Gene;gene=idnO;gene_biotype=protein_coding;locus_tag=PHA56_RS21985;old_locus_tag=PHA56_21985 NZ_CP116214.1 Protein Homology CDS 4650469 4651233 . - 0 ID=cds-WP_014228137.1;Parent=gene-PHA56_RS21985;Dbxref=Genbank:WP_014228137.1;Name=WP_014228137.1;gbkey=CDS;gene=idnO;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019083539.1;locus_tag=PHA56_RS21985;product=gluconate 5-dehydrogenase;protein_id=WP_014228137.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4651411 4652610 . - . ID=gene-PHA56_RS21990;Name=PHA56_RS21990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS21990;old_locus_tag=PHA56_21990 NZ_CP116214.1 Protein Homology CDS 4651411 4652610 . - 0 ID=cds-WP_014228136.1;Parent=gene-PHA56_RS21990;Dbxref=Genbank:WP_014228136.1;Name=WP_014228136.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225363.1;locus_tag=PHA56_RS21990;product=multidrug efflux MFS transporter;protein_id=WP_014228136.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4652780 4653463 . - . ID=gene-PHA56_RS21995;Name=PHA56_RS21995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS21995;old_locus_tag=PHA56_21995 NZ_CP116214.1 Protein Homology CDS 4652780 4653463 . - 0 ID=cds-WP_014837557.1;Parent=gene-PHA56_RS21995;Dbxref=Genbank:WP_014837557.1;Name=WP_014837557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008805341.1;locus_tag=PHA56_RS21995;product=extensin family protein;protein_id=WP_014837557.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4653565 4654662 . + . ID=gene-PHA56_RS22000;Name=ddlA;gbkey=Gene;gene=ddlA;gene_biotype=protein_coding;locus_tag=PHA56_RS22000;old_locus_tag=PHA56_22000 NZ_CP116214.1 Protein Homology CDS 4653565 4654662 . + 0 ID=cds-WP_014228134.1;Parent=gene-PHA56_RS22000;Dbxref=Genbank:WP_014228134.1;Name=WP_014228134.1;Ontology_term=GO:0008716;gbkey=CDS;gene=ddlA;go_function=D-alanine-D-alanine ligase activity|0008716||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004099379.1;locus_tag=PHA56_RS22000;product=D-alanine--D-alanine ligase;protein_id=WP_014228134.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4654776 4654979 . - . ID=gene-PHA56_RS22005;Name=PHA56_RS22005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS22005;old_locus_tag=PHA56_22005 NZ_CP116214.1 Protein Homology CDS 4654776 4654979 . - 0 ID=cds-WP_004132489.1;Parent=gene-PHA56_RS22005;Dbxref=Genbank:WP_004132489.1;Name=WP_004132489.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225360.1;locus_tag=PHA56_RS22005;product=DUF2754 family protein;protein_id=WP_004132489.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4655235 4655537 . + . ID=gene-PHA56_RS22010;Name=PHA56_RS22010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS22010;old_locus_tag=PHA56_22010 NZ_CP116214.1 Protein Homology CDS 4655235 4655537 . + 0 ID=cds-WP_009653569.1;Parent=gene-PHA56_RS22010;Dbxref=Genbank:WP_009653569.1;Name=WP_009653569.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004177280.1;locus_tag=PHA56_RS22010;product=DUF2755 family protein;protein_id=WP_009653569.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4655534 4656634 . - . ID=gene-PHA56_RS22015;Name=PHA56_RS22015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS22015;old_locus_tag=PHA56_22015 NZ_CP116214.1 Protein Homology CDS 4655534 4656634 . - 0 ID=cds-WP_038424135.1;Parent=gene-PHA56_RS22015;Dbxref=Genbank:WP_038424135.1;Name=WP_038424135.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009653549.1;locus_tag=PHA56_RS22015;product=DUF1615 domain-containing protein;protein_id=WP_038424135.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4656653 4657873 . - . ID=gene-PHA56_RS22020;Name=sbmA;gbkey=Gene;gene=sbmA;gene_biotype=protein_coding;locus_tag=PHA56_RS22020;old_locus_tag=PHA56_22020 NZ_CP116214.1 Protein Homology CDS 4656653 4657873 . - 0 ID=cds-WP_119834566.1;Parent=gene-PHA56_RS22020;Dbxref=Genbank:WP_119834566.1;Name=WP_119834566.1;Ontology_term=GO:0015833,GO:1904680;gbkey=CDS;gene=sbmA;go_function=peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120954.1;locus_tag=PHA56_RS22020;product=peptide antibiotic transporter SbmA;protein_id=WP_119834566.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4657991 4658503 . - . ID=gene-PHA56_RS22025;Name=PHA56_RS22025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS22025;old_locus_tag=PHA56_22025 NZ_CP116214.1 Protein Homology CDS 4657991 4658503 . - 0 ID=cds-WP_162933651.1;Parent=gene-PHA56_RS22025;Dbxref=Genbank:WP_162933651.1;Name=WP_162933651.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225356.1;locus_tag=PHA56_RS22025;product=isochorismatase family protein;protein_id=WP_162933651.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4658724 4659884 . + . ID=gene-PHA56_RS22030;Name=ampH;gbkey=Gene;gene=ampH;gene_biotype=protein_coding;locus_tag=PHA56_RS22030;old_locus_tag=PHA56_22030 NZ_CP116214.1 Protein Homology CDS 4658724 4659884 . + 0 ID=cds-WP_014837555.1;Parent=gene-PHA56_RS22030;Dbxref=Genbank:WP_014837555.1;Name=WP_014837555.1;gbkey=CDS;gene=ampH;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225355.1;locus_tag=PHA56_RS22030;product=D-alanyl-D-alanine-carboxypeptidase/endopeptidase AmpH;protein_id=WP_014837555.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4659991 4660965 . + . ID=gene-PHA56_RS22035;Name=hemB;gbkey=Gene;gene=hemB;gene_biotype=protein_coding;locus_tag=PHA56_RS22035;old_locus_tag=PHA56_22035 NZ_CP116214.1 Protein Homology CDS 4659991 4660965 . + 0 ID=cds-WP_004848143.1;Parent=gene-PHA56_RS22035;Dbxref=Genbank:WP_004848143.1;Name=WP_004848143.1;Ontology_term=GO:0033014,GO:0004655;gbkey=CDS;gene=hemB;go_function=porphobilinogen synthase activity|0004655||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225354.1;locus_tag=PHA56_RS22035;product=porphobilinogen synthase;protein_id=WP_004848143.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4661178 4661669 . + . ID=gene-PHA56_RS22040;Name=PHA56_RS22040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS22040;old_locus_tag=PHA56_22040 NZ_CP116214.1 Protein Homology CDS 4661178 4661669 . + 0 ID=cds-WP_032718987.1;Parent=gene-PHA56_RS22040;Dbxref=Genbank:WP_032718987.1;Name=WP_032718987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004204888.1;locus_tag=PHA56_RS22040;product=transposase;protein_id=WP_032718987.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4661830 4663548 . + . ID=gene-PHA56_RS22045;Name=PHA56_RS22045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS22045;old_locus_tag=PHA56_22045 NZ_CP116214.1 Protein Homology CDS 4661830 4663548 . + 0 ID=cds-WP_014228127.1;Parent=gene-PHA56_RS22045;Dbxref=Genbank:WP_014228127.1;Name=WP_014228127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225353.1;locus_tag=PHA56_RS22045;product=lysophospholipid acyltransferase family protein;protein_id=WP_014228127.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4663713 4664564 . - . ID=gene-PHA56_RS22050;Name=tauD;gbkey=Gene;gene=tauD;gene_biotype=protein_coding;locus_tag=PHA56_RS22050;old_locus_tag=PHA56_22050 NZ_CP116214.1 Protein Homology CDS 4663713 4664564 . - 0 ID=cds-WP_032694131.1;Parent=gene-PHA56_RS22050;Dbxref=Genbank:WP_032694131.1;Name=WP_032694131.1;Ontology_term=GO:0016491;gbkey=CDS;gene=tauD;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308449.1;locus_tag=PHA56_RS22050;product=taurine dioxygenase;protein_id=WP_032694131.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4664561 4665388 . - . ID=gene-PHA56_RS22055;Name=tauC;gbkey=Gene;gene=tauC;gene_biotype=protein_coding;locus_tag=PHA56_RS22055;old_locus_tag=PHA56_22055 NZ_CP116214.1 Protein Homology CDS 4664561 4665388 . - 0 ID=cds-WP_004848136.1;Parent=gene-PHA56_RS22055;Dbxref=Genbank:WP_004848136.1;Name=WP_004848136.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=tauC;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225351.1;locus_tag=PHA56_RS22055;product=taurine ABC transporter permease TauC;protein_id=WP_004848136.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4665385 4666152 . - . ID=gene-PHA56_RS22060;Name=tauB;gbkey=Gene;gene=tauB;gene_biotype=protein_coding;locus_tag=PHA56_RS22060;old_locus_tag=PHA56_22060 NZ_CP116214.1 Protein Homology CDS 4665385 4666152 . - 0 ID=cds-WP_004848135.1;Parent=gene-PHA56_RS22060;Dbxref=Genbank:WP_004848135.1;Name=WP_004848135.1;Ontology_term=GO:0005524,GO:0016020;gbkey=CDS;gene=tauB;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225350.1;locus_tag=PHA56_RS22060;product=taurine ABC transporter ATP-binding subunit;protein_id=WP_004848135.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4666164 4667126 . - . ID=gene-PHA56_RS22065;Name=tauA;gbkey=Gene;gene=tauA;gene_biotype=protein_coding;locus_tag=PHA56_RS22065;old_locus_tag=PHA56_22065 NZ_CP116214.1 Protein Homology CDS 4666164 4667126 . - 0 ID=cds-WP_004099349.1;Parent=gene-PHA56_RS22065;Dbxref=Genbank:WP_004099349.1;Name=WP_004099349.1;Ontology_term=GO:0055085,GO:0022857,GO:0042597,GO:0043190;gbkey=CDS;gene=tauA;go_component=periplasmic space|0042597||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225349.1;locus_tag=PHA56_RS22065;product=taurine ABC transporter substrate-binding protein;protein_id=WP_004099349.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4667468 4668097 . + . ID=gene-PHA56_RS22070;Name=PHA56_RS22070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS22070;old_locus_tag=PHA56_22070 NZ_CP116214.1 Protein Homology CDS 4667468 4668097 . + 0 ID=cds-WP_004099348.1;Parent=gene-PHA56_RS22070;Dbxref=Genbank:WP_004099348.1;Name=WP_004099348.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308445.1;locus_tag=PHA56_RS22070;product=response regulator transcription factor;protein_id=WP_004099348.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4668097 4669638 . + . ID=gene-PHA56_RS22075;Name=PHA56_RS22075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS22075;old_locus_tag=PHA56_22075 NZ_CP116214.1 Protein Homology CDS 4668097 4669638 . + 0 ID=cds-WP_038424133.1;Parent=gene-PHA56_RS22075;Dbxref=Genbank:WP_038424133.1;Name=WP_038424133.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014228123.1;locus_tag=PHA56_RS22075;product=MASE1 domain-containing protein;protein_id=WP_038424133.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4669723 4671018 . + . ID=gene-PHA56_RS22080;Name=uhpC;gbkey=Gene;gene=uhpC;gene_biotype=protein_coding;locus_tag=PHA56_RS22080;old_locus_tag=PHA56_22080 NZ_CP116214.1 Protein Homology CDS 4669723 4671018 . + 0 ID=cds-WP_014228122.1;Parent=gene-PHA56_RS22080;Dbxref=Genbank:WP_014228122.1;Name=WP_014228122.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=uhpC;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016808627.1;locus_tag=PHA56_RS22080;product=MFS transporter family glucose-6-phosphate receptor UhpC;protein_id=WP_014228122.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4671018 4672049 . + . ID=gene-PHA56_RS22085;Name=PHA56_RS22085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS22085;old_locus_tag=PHA56_22085 NZ_CP116214.1 Protein Homology CDS 4671018 4672049 . + 0 ID=cds-WP_004133724.1;Parent=gene-PHA56_RS22085;Dbxref=Genbank:WP_004133724.1;Name=WP_004133724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308442.1;locus_tag=PHA56_RS22085;product=ABC transporter substrate-binding protein;protein_id=WP_004133724.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4672119 4674197 . + . ID=gene-PHA56_RS22090;Name=PHA56_RS22090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS22090;old_locus_tag=PHA56_22090 NZ_CP116214.1 Protein Homology CDS 4672119 4674197 . + 0 ID=cds-WP_025107207.1;Parent=gene-PHA56_RS22090;Dbxref=Genbank:WP_025107207.1;Name=WP_025107207.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308441.1;locus_tag=PHA56_RS22090;product=iron ABC transporter permease;protein_id=WP_025107207.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4674209 4675255 . + . ID=gene-PHA56_RS22095;Name=fbpC;gbkey=Gene;gene=fbpC;gene_biotype=protein_coding;locus_tag=PHA56_RS22095;old_locus_tag=PHA56_22095 NZ_CP116214.1 Protein Homology CDS 4674209 4675255 . + 0 ID=cds-WP_014228120.1;Parent=gene-PHA56_RS22095;Dbxref=Genbank:WP_014228120.1;Name=WP_014228120.1;Ontology_term=GO:0055085,GO:0005524,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=fbpC;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014228120.1;locus_tag=PHA56_RS22095;product=ferric ABC transporter ATP-binding protein;protein_id=WP_014228120.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4675345 4676277 . - . ID=gene-PHA56_RS22100;Name=mmuM;gbkey=Gene;gene=mmuM;gene_biotype=protein_coding;locus_tag=PHA56_RS22100;old_locus_tag=PHA56_22100 NZ_CP116214.1 Protein Homology CDS 4675345 4676277 . - 0 ID=cds-WP_014228119.1;Parent=gene-PHA56_RS22100;Dbxref=Genbank:WP_014228119.1;Name=WP_014228119.1;Ontology_term=GO:0009086,GO:0047150;gbkey=CDS;gene=mmuM;go_function=betaine-homocysteine S-methyltransferase activity|0047150||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225348.1;locus_tag=PHA56_RS22100;product=homocysteine S-methyltransferase;protein_id=WP_014228119.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4676264 4677670 . - . ID=gene-PHA56_RS22105;Name=mmuP;gbkey=Gene;gene=mmuP;gene_biotype=protein_coding;locus_tag=PHA56_RS22105;old_locus_tag=PHA56_22105 NZ_CP116214.1 Protein Homology CDS 4676264 4677670 . - 0 ID=cds-WP_038424132.1;Parent=gene-PHA56_RS22105;Dbxref=Genbank:WP_038424132.1;Name=WP_038424132.1;Ontology_term=GO:0055085;gbkey=CDS;gene=mmuP;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414794.4;locus_tag=PHA56_RS22105;product=S-methylmethionine permease;protein_id=WP_038424132.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4677900 4679282 . + . ID=gene-PHA56_RS22110;Name=PHA56_RS22110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS22110;old_locus_tag=PHA56_22110 NZ_CP116214.1 Protein Homology CDS 4677900 4679282 . + 0 ID=cds-WP_038424131.1;Parent=gene-PHA56_RS22110;Dbxref=Genbank:WP_038424131.1;Name=WP_038424131.1;Ontology_term=GO:0005975,GO:0004650;gbkey=CDS;go_function=polygalacturonase activity|0004650||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014228117.1;locus_tag=PHA56_RS22110;product=glycosyl hydrolase family 28 protein;protein_id=WP_038424131.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4679443 4680822 . + . ID=gene-PHA56_RS22115;Name=eat;gbkey=Gene;gene=eat;gene_biotype=protein_coding;locus_tag=PHA56_RS22115;old_locus_tag=PHA56_22115 NZ_CP116214.1 Protein Homology CDS 4679443 4680822 . + 0 ID=cds-WP_004129501.1;Parent=gene-PHA56_RS22115;Dbxref=Genbank:WP_004129501.1;Name=WP_004129501.1;Ontology_term=GO:0006865,GO:0015171,GO:0016020;gbkey=CDS;gene=eat;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225345.1;locus_tag=PHA56_RS22115;product=ethanolamine permease;protein_id=WP_004129501.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4680834 4682207 . + . ID=gene-PHA56_RS22120;Name=PHA56_RS22120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS22120;old_locus_tag=PHA56_22120 NZ_CP116214.1 Protein Homology CDS 4680834 4682207 . + 0 ID=cds-WP_038424130.1;Parent=gene-PHA56_RS22120;Dbxref=Genbank:WP_038424130.1;Name=WP_038424130.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002435015.1;locus_tag=PHA56_RS22120;product=ethanolamine ammonia-lyase subunit EutB;protein_id=WP_038424130.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4682219 4682995 . + . ID=gene-PHA56_RS22125;Name=eutC;gbkey=Gene;gene=eutC;gene_biotype=protein_coding;locus_tag=PHA56_RS22125;old_locus_tag=PHA56_22125 NZ_CP116214.1 Protein Homology CDS 4682219 4682995 . + 0 ID=cds-WP_004099335.1;Parent=gene-PHA56_RS22125;Dbxref=Genbank:WP_004099335.1;Name=WP_004099335.1;Ontology_term=GO:0006520,GO:0008851;gbkey=CDS;gene=eutC;go_function=ethanolamine ammonia-lyase activity|0008851||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225343.1;locus_tag=PHA56_RS22125;product=ethanolamine ammonia-lyase subunit EutC;protein_id=WP_004099335.1;transl_table=11 NZ_CP116214.1 RefSeq pseudogene 4683256 4683336 . - . ID=gene-PHA56_RS22130;Name=PHA56_RS22130;end_range=4683336,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS22130;old_locus_tag=PHA56_22130;partial=true;pseudo=true NZ_CP116214.1 Protein Homology CDS 4683256 4683336 . - 0 ID=cds-PHA56_RS22130;Parent=gene-PHA56_RS22130;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=4683336,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225342.1;locus_tag=PHA56_RS22130;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP116214.1 RefSeq gene 4683586 4684692 . + . ID=gene-PHA56_RS22135;Name=PHA56_RS22135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS22135;old_locus_tag=PHA56_22135 NZ_CP116214.1 Protein Homology CDS 4683586 4684692 . + 0 ID=cds-WP_024359092.1;Parent=gene-PHA56_RS22135;Dbxref=Genbank:WP_024359092.1;Name=WP_024359092.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225341.1;locus_tag=PHA56_RS22135;product=ABC transporter substrate-binding protein;protein_id=WP_024359092.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4684713 4685612 . + . ID=gene-PHA56_RS22140;Name=PHA56_RS22140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS22140;old_locus_tag=PHA56_22140 NZ_CP116214.1 Protein Homology CDS 4684713 4685612 . + 0 ID=cds-WP_004099333.1;Parent=gene-PHA56_RS22140;Dbxref=Genbank:WP_004099333.1;Name=WP_004099333.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225340.1;locus_tag=PHA56_RS22140;product=branched-chain amino acid ABC transporter permease;protein_id=WP_004099333.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4685612 4686661 . + . ID=gene-PHA56_RS22145;Name=PHA56_RS22145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS22145;old_locus_tag=PHA56_22145 NZ_CP116214.1 Protein Homology CDS 4685612 4686661 . + 0 ID=cds-WP_014228114.1;Parent=gene-PHA56_RS22145;Dbxref=Genbank:WP_014228114.1;Name=WP_014228114.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225339.1;locus_tag=PHA56_RS22145;product=branched-chain amino acid ABC transporter permease;protein_id=WP_014228114.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4686648 4687430 . + . ID=gene-PHA56_RS22150;Name=PHA56_RS22150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS22150;old_locus_tag=PHA56_22150 NZ_CP116214.1 Protein Homology CDS 4686648 4687430 . + 0 ID=cds-WP_014228113.1;Parent=gene-PHA56_RS22150;Dbxref=Genbank:WP_014228113.1;Name=WP_014228113.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225338.1;locus_tag=PHA56_RS22150;product=ABC transporter ATP-binding protein;protein_id=WP_014228113.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4687423 4688118 . + . ID=gene-PHA56_RS22155;Name=PHA56_RS22155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS22155;old_locus_tag=PHA56_22155 NZ_CP116214.1 Protein Homology CDS 4687423 4688118 . + 0 ID=cds-WP_014228112.1;Parent=gene-PHA56_RS22155;Dbxref=Genbank:WP_014228112.1;Name=WP_014228112.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225337.1;locus_tag=PHA56_RS22155;product=ABC transporter ATP-binding protein;protein_id=WP_014228112.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4688226 4688408 . - . ID=gene-PHA56_RS22160;Name=PHA56_RS22160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS22160;old_locus_tag=PHA56_22160 NZ_CP116214.1 Protein Homology CDS 4688226 4688408 . - 0 ID=cds-WP_004129481.1;Parent=gene-PHA56_RS22160;Dbxref=Genbank:WP_004129481.1;Name=WP_004129481.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004858395.1;locus_tag=PHA56_RS22160;product=hypothetical protein;protein_id=WP_004129481.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4689131 4689940 . + . ID=gene-PHA56_RS22165;Name=PHA56_RS22165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS22165;old_locus_tag=PHA56_22165 NZ_CP116214.1 Protein Homology CDS 4689131 4689940 . + 0 ID=cds-WP_014228110.1;Parent=gene-PHA56_RS22165;Dbxref=Genbank:WP_014228110.1;Name=WP_014228110.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225335.1;locus_tag=PHA56_RS22165;product=ABC transporter substrate-binding protein;protein_id=WP_014228110.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4689954 4690772 . + . ID=gene-PHA56_RS22170;Name=PHA56_RS22170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS22170;old_locus_tag=PHA56_22170 NZ_CP116214.1 Protein Homology CDS 4689954 4690772 . + 0 ID=cds-WP_032693224.1;Parent=gene-PHA56_RS22170;Dbxref=Genbank:WP_032693224.1;Name=WP_032693224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004848104.1;locus_tag=PHA56_RS22170;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_032693224.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4690769 4691521 . + . ID=gene-PHA56_RS22175;Name=PHA56_RS22175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS22175;old_locus_tag=PHA56_22175 NZ_CP116214.1 Protein Homology CDS 4690769 4691521 . + 0 ID=cds-WP_014228108.1;Parent=gene-PHA56_RS22175;Dbxref=Genbank:WP_014228108.1;Name=WP_014228108.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225333.1;locus_tag=PHA56_RS22175;product=amino acid ABC transporter permease;protein_id=WP_014228108.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4691511 4692194 . + . ID=gene-PHA56_RS22180;Name=PHA56_RS22180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS22180;old_locus_tag=PHA56_22180 NZ_CP116214.1 Protein Homology CDS 4691511 4692194 . + 0 ID=cds-WP_014228107.1;Parent=gene-PHA56_RS22180;Dbxref=Genbank:WP_014228107.1;Name=WP_014228107.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014837541.1;locus_tag=PHA56_RS22180;product=amino acid ABC transporter permease;protein_id=WP_014228107.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4692222 4692926 . - . ID=gene-PHA56_RS22185;Name=PHA56_RS22185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS22185;old_locus_tag=PHA56_22185 NZ_CP116214.1 Protein Homology CDS 4692222 4692926 . - 0 ID=cds-WP_032693221.1;Parent=gene-PHA56_RS22185;Dbxref=Genbank:WP_032693221.1;Name=WP_032693221.1;Ontology_term=GO:0071555,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014837540.1;locus_tag=PHA56_RS22185;product=fimbria/pilus periplasmic chaperone;protein_id=WP_032693221.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4692895 4694508 . - . ID=gene-PHA56_RS22190;Name=PHA56_RS22190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS22190;old_locus_tag=PHA56_22190 NZ_CP116214.1 Protein Homology CDS 4692895 4694508 . - 0 ID=cds-WP_223226756.1;Parent=gene-PHA56_RS22190;Dbxref=Genbank:WP_223226756.1;Name=WP_223226756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004129471.1;locus_tag=PHA56_RS22190;product=hypothetical protein;protein_id=WP_223226756.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4694528 4697053 . - . ID=gene-PHA56_RS22195;Name=PHA56_RS22195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS22195;old_locus_tag=PHA56_22195 NZ_CP116214.1 Protein Homology CDS 4694528 4697053 . - 0 ID=cds-WP_014228104.1;Parent=gene-PHA56_RS22195;Dbxref=Genbank:WP_014228104.1;Name=WP_014228104.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414825.1;locus_tag=PHA56_RS22195;product=fimbrial biogenesis outer membrane usher protein;protein_id=WP_014228104.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4697079 4697747 . - . ID=gene-PHA56_RS22200;Name=PHA56_RS22200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS22200;old_locus_tag=PHA56_22200 NZ_CP116214.1 Protein Homology CDS 4697079 4697747 . - 0 ID=cds-WP_004848094.1;Parent=gene-PHA56_RS22200;Dbxref=Genbank:WP_004848094.1;Name=WP_004848094.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225328.1;locus_tag=PHA56_RS22200;product=hypothetical protein;protein_id=WP_004848094.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4697807 4698394 . - . ID=gene-PHA56_RS22205;Name=PHA56_RS22205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS22205;old_locus_tag=PHA56_22205 NZ_CP116214.1 Protein Homology CDS 4697807 4698394 . - 0 ID=cds-WP_014228102.1;Parent=gene-PHA56_RS22205;Dbxref=Genbank:WP_014228102.1;Name=WP_014228102.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225327.1;locus_tag=PHA56_RS22205;product=common pilus major fimbrillin subunit EcpA;protein_id=WP_014228102.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4698548 4699090 . - . ID=gene-PHA56_RS22210;Name=PHA56_RS22210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS22210;old_locus_tag=PHA56_22210 NZ_CP116214.1 Protein Homology CDS 4698548 4699090 . - 0 ID=cds-WP_014228101.1;Parent=gene-PHA56_RS22210;Dbxref=Genbank:WP_014228101.1;Name=WP_014228101.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004099317.1;locus_tag=PHA56_RS22210;product=helix-turn-helix transcriptional regulator;protein_id=WP_014228101.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4700017 4700859 . + . ID=gene-PHA56_RS22215;Name=phnC;gbkey=Gene;gene=phnC;gene_biotype=protein_coding;locus_tag=PHA56_RS22215;old_locus_tag=PHA56_22215 NZ_CP116214.1 Protein Homology CDS 4700017 4700859 . + 0 ID=cds-WP_032693217.1;Parent=gene-PHA56_RS22215;Dbxref=Genbank:WP_032693217.1;Name=WP_032693217.1;Ontology_term=GO:0015716,GO:0005524,GO:0015416,GO:0009898,GO:0055052;gbkey=CDS;gene=phnC;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ABC-type phosphonate transporter activity|0015416||IEA;go_process=organic phosphonate transport|0015716||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225325.1;locus_tag=PHA56_RS22215;product=phosphonate ABC transporter ATP-binding protein;protein_id=WP_032693217.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4700883 4701824 . + . ID=gene-PHA56_RS22220;Name=phnD;gbkey=Gene;gene=phnD;gene_biotype=protein_coding;locus_tag=PHA56_RS22220;old_locus_tag=PHA56_22220 NZ_CP116214.1 Protein Homology CDS 4700883 4701824 . + 0 ID=cds-WP_009654530.1;Parent=gene-PHA56_RS22220;Dbxref=Genbank:WP_009654530.1;Name=WP_009654530.1;Ontology_term=GO:0015716,GO:0043190;gbkey=CDS;gene=phnD;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=organic phosphonate transport|0015716||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225324.1;locus_tag=PHA56_RS22220;product=phosphonate ABC transporter substrate-binding protein;protein_id=WP_009654530.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4701893 4702765 . + . ID=gene-PHA56_RS22225;Name=phnE;gbkey=Gene;gene=phnE;gene_biotype=protein_coding;locus_tag=PHA56_RS22225;old_locus_tag=PHA56_22225 NZ_CP116214.1 Protein Homology CDS 4701893 4702765 . + 0 ID=cds-WP_038424128.1;Parent=gene-PHA56_RS22225;Dbxref=Genbank:WP_038424128.1;Name=WP_038424128.1;Ontology_term=GO:0015716,GO:0015416,GO:0005886,GO:0055052;gbkey=CDS;gene=phnE;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type phosphonate transporter activity|0015416||IEA;go_process=organic phosphonate transport|0015716||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225323.1;locus_tag=PHA56_RS22225;product=phosphonate ABC transporter%2C permease protein PhnE;protein_id=WP_038424128.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4702762 4703643 . + . ID=gene-PHA56_RS22230;Name=phnE;gbkey=Gene;gene=phnE;gene_biotype=protein_coding;locus_tag=PHA56_RS22230;old_locus_tag=PHA56_22230 NZ_CP116214.1 Protein Homology CDS 4702762 4703643 . + 0 ID=cds-WP_119834567.1;Parent=gene-PHA56_RS22230;Dbxref=Genbank:WP_119834567.1;Name=WP_119834567.1;Ontology_term=GO:0015716,GO:0015416,GO:0005886,GO:0055052;gbkey=CDS;gene=phnE;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type phosphonate transporter activity|0015416||IEA;go_process=organic phosphonate transport|0015716||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014837534.1;locus_tag=PHA56_RS22230;product=phosphonate ABC transporter%2C permease protein PhnE;protein_id=WP_119834567.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4703743 4704405 . - . ID=gene-PHA56_RS22235;Name=PHA56_RS22235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS22235;old_locus_tag=PHA56_22235 NZ_CP116214.1 Protein Homology CDS 4703743 4704405 . - 0 ID=cds-WP_038424127.1;Parent=gene-PHA56_RS22235;Dbxref=Genbank:WP_038424127.1;Name=WP_038424127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014837533.1;locus_tag=PHA56_RS22235;product=HAD-IB family hydrolase;protein_id=WP_038424127.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4704518 4705327 . - . ID=gene-PHA56_RS22240;Name=PHA56_RS22240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS22240;old_locus_tag=PHA56_22240 NZ_CP116214.1 Protein Homology CDS 4704518 4705327 . - 0 ID=cds-WP_119834568.1;Parent=gene-PHA56_RS22240;Dbxref=Genbank:WP_119834568.1;Name=WP_119834568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009654527.1;locus_tag=PHA56_RS22240;product=sulfite exporter TauE/SafE family protein;protein_id=WP_119834568.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4705428 4706225 . + . ID=gene-PHA56_RS22245;Name=PHA56_RS22245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS22245;old_locus_tag=PHA56_22245 NZ_CP116214.1 Protein Homology CDS 4705428 4706225 . + 0 ID=cds-WP_076752500.1;Parent=gene-PHA56_RS22245;Dbxref=Genbank:WP_076752500.1;Name=WP_076752500.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004848073.1;locus_tag=PHA56_RS22245;product=helix-turn-helix transcriptional regulator;protein_id=WP_076752500.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4706233 4708020 . - . ID=gene-PHA56_RS22250;Name=PHA56_RS22250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS22250;old_locus_tag=PHA56_22250 NZ_CP116214.1 Protein Homology CDS 4706233 4708020 . - 0 ID=cds-WP_038424125.1;Parent=gene-PHA56_RS22250;Dbxref=Genbank:WP_038424125.1;Name=WP_038424125.1;Ontology_term=GO:0004062;gbkey=CDS;go_function=aryl sulfotransferase activity|0004062||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014837531.1;locus_tag=PHA56_RS22250;product=aryl-sulfate sulfotransferase;protein_id=WP_038424125.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4708044 4708787 . - . ID=gene-PHA56_RS22255;Name=PHA56_RS22255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS22255;old_locus_tag=PHA56_22255 NZ_CP116214.1 Protein Homology CDS 4708044 4708787 . - 0 ID=cds-WP_032718975.1;Parent=gene-PHA56_RS22255;Dbxref=Genbank:WP_032718975.1;Name=WP_032718975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004099303.1;locus_tag=PHA56_RS22255;product=ABC transporter ATP-binding protein;protein_id=WP_032718975.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4708784 4710352 . - . ID=gene-PHA56_RS22260;Name=PHA56_RS22260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS22260;old_locus_tag=PHA56_22260 NZ_CP116214.1 Protein Homology CDS 4708784 4710352 . - 0 ID=cds-WP_038424123.1;Parent=gene-PHA56_RS22260;Dbxref=Genbank:WP_038424123.1;Name=WP_038424123.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017146545.1;locus_tag=PHA56_RS22260;product=ABC transporter permease;protein_id=WP_038424123.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4710575 4711642 . + . ID=gene-PHA56_RS22265;Name=PHA56_RS22265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS22265;old_locus_tag=PHA56_22265 NZ_CP116214.1 Protein Homology CDS 4710575 4711642 . + 0 ID=cds-WP_014228091.1;Parent=gene-PHA56_RS22265;Dbxref=Genbank:WP_014228091.1;Name=WP_014228091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014837527.1;locus_tag=PHA56_RS22265;product=ABC transporter substrate-binding protein;protein_id=WP_014228091.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4711639 4712583 . - . ID=gene-PHA56_RS22270;Name=PHA56_RS22270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS22270;old_locus_tag=PHA56_22270 NZ_CP116214.1 Protein Homology CDS 4711639 4712583 . - 0 ID=cds-WP_014228090.1;Parent=gene-PHA56_RS22270;Dbxref=Genbank:WP_014228090.1;Name=WP_014228090.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004129427.1;locus_tag=PHA56_RS22270;product=LysR family transcriptional regulator;protein_id=WP_014228090.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4712914 4713477 . + . ID=gene-PHA56_RS22275;Name=PHA56_RS22275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS22275;old_locus_tag=PHA56_22275 NZ_CP116214.1 Protein Homology CDS 4712914 4713477 . + 0 ID=cds-WP_025107227.1;Parent=gene-PHA56_RS22275;Dbxref=Genbank:WP_025107227.1;Name=WP_025107227.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004848069.1;locus_tag=PHA56_RS22275;product=NlpC/P60 family protein;protein_id=WP_025107227.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4713539 4714591 . - . ID=gene-PHA56_RS22280;Name=phoE;gbkey=Gene;gene=phoE;gene_biotype=protein_coding;locus_tag=PHA56_RS22280;old_locus_tag=PHA56_22280 NZ_CP116214.1 Protein Homology CDS 4713539 4714591 . - 0 ID=cds-WP_004129421.1;Parent=gene-PHA56_RS22280;Dbxref=Genbank:WP_004129421.1;Name=WP_004129421.1;Ontology_term=GO:0034220,GO:0015288,GO:0016020;gbkey=CDS;gene=phoE;go_component=membrane|0016020||IEA;go_function=porin activity|0015288||IEA;go_process=monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225317.1;locus_tag=PHA56_RS22280;product=phosphoporin PhoE;protein_id=WP_004129421.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4714882 4715985 . + . ID=gene-PHA56_RS22285;Name=proB;gbkey=Gene;gene=proB;gene_biotype=protein_coding;locus_tag=PHA56_RS22285;old_locus_tag=PHA56_22285 NZ_CP116214.1 Protein Homology CDS 4714882 4715985 . + 0 ID=cds-WP_004848066.1;Parent=gene-PHA56_RS22285;Dbxref=Genbank:WP_004848066.1;Name=WP_004848066.1;Ontology_term=GO:0006561,GO:0004349;gbkey=CDS;gene=proB;go_function=glutamate 5-kinase activity|0004349||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308296.1;locus_tag=PHA56_RS22285;product=glutamate 5-kinase;protein_id=WP_004848066.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4715996 4717249 . + . ID=gene-PHA56_RS22290;Name=proA;gbkey=Gene;gene=proA;gene_biotype=protein_coding;locus_tag=PHA56_RS22290;old_locus_tag=PHA56_22290 NZ_CP116214.1 Protein Homology CDS 4715996 4717249 . + 0 ID=cds-WP_014228088.1;Parent=gene-PHA56_RS22290;Dbxref=Genbank:WP_014228088.1;Name=WP_014228088.1;Ontology_term=GO:0006561,GO:0004350;gbkey=CDS;gene=proA;go_function=glutamate-5-semialdehyde dehydrogenase activity|0004350||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225314.1;locus_tag=PHA56_RS22290;product=glutamate-5-semialdehyde dehydrogenase;protein_id=WP_014228088.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4717362 4717437 . + . ID=gene-PHA56_RS22295;Name=PHA56_RS22295;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA56_RS22295;old_locus_tag=PHA56_22295 NZ_CP116214.1 tRNAscan-SE tRNA 4717362 4717437 . + . ID=rna-PHA56_RS22295;Parent=gene-PHA56_RS22295;anticodon=(pos:4717395..4717397);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS22295;product=tRNA-Thr NZ_CP116214.1 tRNAscan-SE exon 4717362 4717437 . + . ID=exon-PHA56_RS22295-1;Parent=rna-PHA56_RS22295;anticodon=(pos:4717395..4717397);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS22295;product=tRNA-Thr NZ_CP116214.1 RefSeq gene 4717837 4718964 . - . ID=gene-PHA56_RS22300;Name=PHA56_RS22300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS22300;old_locus_tag=PHA56_22300 NZ_CP116214.1 Protein Homology CDS 4717837 4718964 . - 0 ID=cds-WP_223226753.1;Parent=gene-PHA56_RS22300;Dbxref=Genbank:WP_223226753.1;Name=WP_223226753.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022062.2;locus_tag=PHA56_RS22300;product=AIPR family protein;protein_id=WP_223226753.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4718861 4719565 . - . ID=gene-PHA56_RS22305;Name=PHA56_RS22305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS22305;old_locus_tag=PHA56_22305 NZ_CP116214.1 GeneMarkS-2+ CDS 4718861 4719565 . - 0 ID=cds-WP_223226752.1;Parent=gene-PHA56_RS22305;Dbxref=Genbank:WP_223226752.1;Name=WP_223226752.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PHA56_RS22305;product=hypothetical protein;protein_id=WP_223226752.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4720227 4721129 . + . ID=gene-PHA56_RS22310;Name=PHA56_RS22310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS22310;old_locus_tag=PHA56_22310 NZ_CP116214.1 Protein Homology CDS 4720227 4721129 . + 0 ID=cds-WP_042944361.1;Parent=gene-PHA56_RS22310;Dbxref=Genbank:WP_042944361.1;Name=WP_042944361.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025713.2;locus_tag=PHA56_RS22310;product=abortive infection family protein;protein_id=WP_042944361.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4721253 4721804 . + . ID=gene-PHA56_RS22315;Name=PHA56_RS22315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS22315;old_locus_tag=PHA56_22315 NZ_CP116214.1 GeneMarkS-2+ CDS 4721253 4721804 . + 0 ID=cds-WP_049870904.1;Parent=gene-PHA56_RS22315;Dbxref=Genbank:WP_049870904.1;Name=WP_049870904.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PHA56_RS22315;product=hypothetical protein;protein_id=WP_049870904.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4722107 4723203 . + . ID=gene-PHA56_RS22320;Name=PHA56_RS22320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS22320;old_locus_tag=PHA56_22320 NZ_CP116214.1 Protein Homology CDS 4722107 4722368 . + 0 ID=cds-WP_103433586.1;Parent=gene-PHA56_RS22320;Dbxref=Genbank:WP_103433586.1;Name=WP_103433586.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612267.1;locus_tag=PHA56_RS22320;product=IS3 family transposase;protein_id=WP_103433586.1;transl_table=11 NZ_CP116214.1 Protein Homology CDS 4722368 4723203 . + 2 ID=cds-WP_103433586.1;Parent=gene-PHA56_RS22320;Dbxref=Genbank:WP_103433586.1;Name=WP_103433586.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612267.1;locus_tag=PHA56_RS22320;product=IS3 family transposase;protein_id=WP_103433586.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4723469 4724278 . - . ID=gene-PHA56_RS22325;Name=hutG;gbkey=Gene;gene=hutG;gene_biotype=protein_coding;locus_tag=PHA56_RS22325;old_locus_tag=PHA56_22325 NZ_CP116214.1 Protein Homology CDS 4723469 4724278 . - 0 ID=cds-WP_042944355.1;Parent=gene-PHA56_RS22325;Dbxref=Genbank:WP_042944355.1;Name=WP_042944355.1;Ontology_term=GO:0019557,GO:0050129;gbkey=CDS;gene=hutG;go_function=N-formylglutamate deformylase activity|0050129||IEA;go_process=histidine catabolic process to glutamate and formate|0019557||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009652944.1;locus_tag=PHA56_RS22325;product=N-formylglutamate deformylase;protein_id=WP_042944355.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4724271 4725479 . - . ID=gene-PHA56_RS22330;Name=hutI;gbkey=Gene;gene=hutI;gene_biotype=protein_coding;locus_tag=PHA56_RS22330;old_locus_tag=PHA56_22330 NZ_CP116214.1 Protein Homology CDS 4724271 4725479 . - 0 ID=cds-WP_025107234.1;Parent=gene-PHA56_RS22330;Dbxref=Genbank:WP_025107234.1;Name=WP_025107234.1;Ontology_term=GO:0006548,GO:0050480;gbkey=CDS;gene=hutI;go_function=imidazolonepropionase activity|0050480||IEA;go_process=histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004848034.1;locus_tag=PHA56_RS22330;product=imidazolonepropionase;protein_id=WP_025107234.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4725491 4726885 . - . ID=gene-PHA56_RS22335;Name=PHA56_RS22335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS22335;old_locus_tag=PHA56_22335 NZ_CP116214.1 Protein Homology CDS 4725491 4726885 . - 0 ID=cds-WP_014228069.1;Parent=gene-PHA56_RS22335;Dbxref=Genbank:WP_014228069.1;Name=WP_014228069.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004848032.1;locus_tag=PHA56_RS22335;product=cytosine permease;protein_id=WP_014228069.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4726938 4728614 . - . ID=gene-PHA56_RS22340;Name=hutU;gbkey=Gene;gene=hutU;gene_biotype=protein_coding;locus_tag=PHA56_RS22340;old_locus_tag=PHA56_22340 NZ_CP116214.1 Protein Homology CDS 4726938 4728614 . - 0 ID=cds-WP_014228068.1;Parent=gene-PHA56_RS22340;Dbxref=Genbank:WP_014228068.1;Name=WP_014228068.1;Ontology_term=GO:0006548,GO:0016153;gbkey=CDS;gene=hutU;go_function=urocanate hydratase activity|0016153||IEA;go_process=histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004118875.1;locus_tag=PHA56_RS22340;product=urocanate hydratase;protein_id=WP_014228068.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4729122 4730219 . + . ID=gene-PHA56_RS22345;Name=PHA56_RS22345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS22345;old_locus_tag=PHA56_22345 NZ_CP116214.1 Protein Homology CDS 4729122 4730219 . + 0 ID=cds-WP_032693202.1;Parent=gene-PHA56_RS22345;Dbxref=Genbank:WP_032693202.1;Name=WP_032693202.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004848028.1;locus_tag=PHA56_RS22345;product=ATP-binding cassette domain-containing protein;protein_id=WP_032693202.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4730216 4730860 . + . ID=gene-PHA56_RS22350;Name=PHA56_RS22350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS22350;old_locus_tag=PHA56_22350 NZ_CP116214.1 Protein Homology CDS 4730216 4730860 . + 0 ID=cds-WP_048261320.1;Parent=gene-PHA56_RS22350;Dbxref=Genbank:WP_048261320.1;Name=WP_048261320.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009652946.1;locus_tag=PHA56_RS22350;product=ABC transporter permease subunit;protein_id=WP_048261320.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4730863 4731543 . + . ID=gene-PHA56_RS22355;Name=PHA56_RS22355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS22355;old_locus_tag=PHA56_22355 NZ_CP116214.1 Protein Homology CDS 4730863 4731543 . + 0 ID=cds-WP_119834693.1;Parent=gene-PHA56_RS22355;Dbxref=Genbank:WP_119834693.1;Name=WP_119834693.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004848022.1;locus_tag=PHA56_RS22355;product=ABC transporter permease;protein_id=WP_119834693.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4731574 4732449 . + . ID=gene-PHA56_RS22360;Name=PHA56_RS22360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS22360;old_locus_tag=PHA56_22360 NZ_CP116214.1 Protein Homology CDS 4731574 4732449 . + 0 ID=cds-WP_042944349.1;Parent=gene-PHA56_RS22360;Dbxref=Genbank:WP_042944349.1;Name=WP_042944349.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017900874.1;locus_tag=PHA56_RS22360;product=ABC transporter substrate-binding protein;protein_id=WP_042944349.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4732460 4733992 . + . ID=gene-PHA56_RS22365;Name=PHA56_RS22365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS22365;old_locus_tag=PHA56_22365 NZ_CP116214.1 Protein Homology CDS 4732460 4733992 . + 0 ID=cds-WP_042946170.1;Parent=gene-PHA56_RS22365;Dbxref=Genbank:WP_042946170.1;Name=WP_042946170.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004848018.1;locus_tag=PHA56_RS22365;product=aromatic amino acid ammonia-lyase;protein_id=WP_042946170.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4734026 4734583 . - . ID=gene-PHA56_RS22370;Name=PHA56_RS22370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS22370;old_locus_tag=PHA56_22370 NZ_CP116214.1 Protein Homology CDS 4734026 4734583 . - 0 ID=cds-WP_042944347.1;Parent=gene-PHA56_RS22370;Dbxref=Genbank:WP_042944347.1;Name=WP_042944347.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017900872.1;locus_tag=PHA56_RS22370;product=HutD family protein;protein_id=WP_042944347.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4734580 4735341 . - . ID=gene-PHA56_RS22375;Name=hutC;gbkey=Gene;gene=hutC;gene_biotype=protein_coding;locus_tag=PHA56_RS22375;old_locus_tag=PHA56_22375 NZ_CP116214.1 Protein Homology CDS 4734580 4735341 . - 0 ID=cds-WP_004848014.1;Parent=gene-PHA56_RS22375;Dbxref=Genbank:WP_004848014.1;Name=WP_004848014.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=hutC;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017900871.1;locus_tag=PHA56_RS22375;product=histidine utilization repressor;protein_id=WP_004848014.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4735444 4736811 . + . ID=gene-PHA56_RS22380;Name=PHA56_RS22380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS22380;old_locus_tag=PHA56_22380 NZ_CP116214.1 Protein Homology CDS 4735444 4736811 . + 0 ID=cds-WP_014228062.1;Parent=gene-PHA56_RS22380;Dbxref=Genbank:WP_014228062.1;Name=WP_014228062.1;Ontology_term=GO:0016810;gbkey=CDS;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004848011.1;locus_tag=PHA56_RS22380;product=formimidoylglutamate deiminase;protein_id=WP_014228062.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4736886 4738175 . - . ID=gene-PHA56_RS22385;Name=PHA56_RS22385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS22385;old_locus_tag=PHA56_22385 NZ_CP116214.1 Protein Homology CDS 4736886 4738175 . - 0 ID=cds-WP_042944345.1;Parent=gene-PHA56_RS22385;Dbxref=Genbank:WP_042944345.1;Name=WP_042944345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004848008.1;locus_tag=PHA56_RS22385;product=anaerobic C4-dicarboxylate transporter family protein;protein_id=WP_042944345.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4738291 4739139 . - . ID=gene-PHA56_RS22390;Name=PHA56_RS22390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS22390;old_locus_tag=PHA56_22390 NZ_CP116214.1 Protein Homology CDS 4738291 4739139 . - 0 ID=cds-WP_042944344.1;Parent=gene-PHA56_RS22390;Dbxref=Genbank:WP_042944344.1;Name=WP_042944344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004129310.1;locus_tag=PHA56_RS22390;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_042944344.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4739282 4740211 . - . ID=gene-PHA56_RS22395;Name=PHA56_RS22395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS22395;old_locus_tag=PHA56_22395 NZ_CP116214.1 Protein Homology CDS 4739282 4740211 . - 0 ID=cds-WP_004848004.1;Parent=gene-PHA56_RS22395;Dbxref=Genbank:WP_004848004.1;Name=WP_004848004.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004848004.1;locus_tag=PHA56_RS22395;product=dihydrodipicolinate synthase family protein;protein_id=WP_004848004.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4740463 4741494 . - . ID=gene-PHA56_RS22400;Name=PHA56_RS22400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS22400;old_locus_tag=PHA56_22400 NZ_CP116214.1 Protein Homology CDS 4740463 4741494 . - 0 ID=cds-WP_004848002.1;Parent=gene-PHA56_RS22400;Dbxref=Genbank:WP_004848002.1;Name=WP_004848002.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019106552.1;locus_tag=PHA56_RS22400;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_004848002.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4741932 4743329 . + . ID=gene-PHA56_RS22405;Name=PHA56_RS22405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS22405;old_locus_tag=PHA56_22405 NZ_CP116214.1 Protein Homology CDS 4741932 4743329 . + 0 ID=cds-WP_119834692.1;Parent=gene-PHA56_RS22405;Dbxref=Genbank:WP_119834692.1;Name=WP_119834692.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004848000.1;locus_tag=PHA56_RS22405;product=MFS transporter;protein_id=WP_119834692.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4743452 4744792 . + . ID=gene-PHA56_RS22410;Name=PHA56_RS22410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS22410;old_locus_tag=PHA56_22410 NZ_CP116214.1 Protein Homology CDS 4743452 4744792 . + 0 ID=cds-WP_119834691.1;Parent=gene-PHA56_RS22410;Dbxref=Genbank:WP_119834691.1;Name=WP_119834691.1;Ontology_term=GO:0008643,GO:0015288,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=porin activity|0015288||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009654189.1;locus_tag=PHA56_RS22410;product=carbohydrate porin;protein_id=WP_119834691.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4744930 4745838 . - . ID=gene-PHA56_RS22415;Name=gcvA;gbkey=Gene;gene=gcvA;gene_biotype=protein_coding;locus_tag=PHA56_RS22415;old_locus_tag=PHA56_22415 NZ_CP116214.1 Protein Homology CDS 4744930 4745838 . - 0 ID=cds-WP_119834690.1;Parent=gene-PHA56_RS22415;Dbxref=Genbank:WP_119834690.1;Name=WP_119834690.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=gcvA;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014228058.1;locus_tag=PHA56_RS22415;product=transcriptional regulator GcvA;protein_id=WP_119834690.1;transl_table=11 NZ_CP116214.1 RefSeq pseudogene 4745958 4746871 . + . ID=gene-PHA56_RS22420;Name=PHA56_RS22420;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS22420;old_locus_tag=PHA56_22420;pseudo=true NZ_CP116214.1 Protein Homology CDS 4745958 4746871 . + 0 ID=cds-PHA56_RS22420;Parent=gene-PHA56_RS22420;Note=frameshifted;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014837498.1;locus_tag=PHA56_RS22420;product=EamA family transporter;pseudo=true;transl_table=11 NZ_CP116214.1 RefSeq gene 4746892 4747239 . - . ID=gene-PHA56_RS22425;Name=PHA56_RS22425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS22425;old_locus_tag=PHA56_22425 NZ_CP116214.1 GeneMarkS-2+ CDS 4746892 4747239 . - 0 ID=cds-WP_014837497.1;Parent=gene-PHA56_RS22425;Dbxref=Genbank:WP_014837497.1;Name=WP_014837497.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PHA56_RS22425;product=hypothetical protein;protein_id=WP_014837497.1;transl_table=11 NZ_CP116214.1 RefSeq pseudogene 4747274 4747354 . - . ID=gene-PHA56_RS22430;Name=PHA56_RS22430;end_range=4747354,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS22430;old_locus_tag=PHA56_22430;partial=true;pseudo=true NZ_CP116214.1 Protein Homology CDS 4747274 4747354 . - 0 ID=cds-PHA56_RS22430;Parent=gene-PHA56_RS22430;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=4747354,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229630.1;locus_tag=PHA56_RS22430;partial=true;product=VapC toxin family PIN domain ribonuclease;pseudo=true;transl_table=11 NZ_CP116214.1 RefSeq gene 4747387 4748712 . - . ID=gene-PHA56_RS22435;Name=PHA56_RS22435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS22435;old_locus_tag=PHA56_22435 NZ_CP116214.1 GeneMarkS-2+ CDS 4747387 4748712 . - 0 ID=cds-WP_176394013.1;Parent=gene-PHA56_RS22435;Dbxref=Genbank:WP_176394013.1;Name=WP_176394013.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PHA56_RS22435;product=hypothetical protein;protein_id=WP_176394013.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4749579 4750352 . + . ID=gene-PHA56_RS22440;Name=PHA56_RS22440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS22440;old_locus_tag=PHA56_22440 NZ_CP116214.1 GeneMarkS-2+ CDS 4749579 4750352 . + 0 ID=cds-WP_103433587.1;Parent=gene-PHA56_RS22440;Dbxref=Genbank:WP_103433587.1;Name=WP_103433587.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PHA56_RS22440;product=Zygote formation protein zyg1;protein_id=WP_103433587.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4750663 4751136 . + . ID=gene-PHA56_RS22445;Name=PHA56_RS22445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS22445;old_locus_tag=PHA56_22445 NZ_CP116214.1 GeneMarkS-2+ CDS 4750663 4751136 . + 0 ID=cds-WP_032693194.1;Parent=gene-PHA56_RS22445;Dbxref=Genbank:WP_032693194.1;Name=WP_032693194.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PHA56_RS22445;product=hypothetical protein;protein_id=WP_032693194.1;transl_table=11 NZ_CP116214.1 RefSeq pseudogene 4751405 4751754 . - . ID=gene-PHA56_RS22450;Name=PHA56_RS22450;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS22450;old_locus_tag=PHA56_22450;pseudo=true NZ_CP116214.1 Protein Homology CDS 4751405 4751754 . - 0 ID=cds-PHA56_RS22450;Parent=gene-PHA56_RS22450;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001362712.1;locus_tag=PHA56_RS22450;product=type II toxin-antitoxin system VapC family toxin;pseudo=true;transl_table=11 NZ_CP116214.1 RefSeq pseudogene 4751817 4751975 . - . ID=gene-PHA56_RS22455;Name=PHA56_RS22455;end_range=4751975,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS22455;old_locus_tag=PHA56_22455;partial=true;pseudo=true NZ_CP116214.1 Protein Homology CDS 4751817 4751975 . - 0 ID=cds-PHA56_RS22455;Parent=gene-PHA56_RS22455;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=4751975,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229629.1;locus_tag=PHA56_RS22455;partial=true;product=AbrB/MazE/SpoVT family DNA-binding domain-containing protein;pseudo=true;transl_table=11 NZ_CP116214.1 RefSeq gene 4752009 4752755 . - . ID=gene-PHA56_RS22460;Name=PHA56_RS22460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS22460;old_locus_tag=PHA56_22460 NZ_CP116214.1 Protein Homology CDS 4752009 4752755 . - 0 ID=cds-WP_223226754.1;Parent=gene-PHA56_RS22460;Dbxref=Genbank:WP_223226754.1;Name=WP_223226754.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225286.1;locus_tag=PHA56_RS22460;product=class I SAM-dependent methyltransferase;protein_id=WP_223226754.1;transl_table=11 NZ_CP116214.1 RefSeq pseudogene 4753179 4753541 . - . ID=gene-PHA56_RS22465;Name=PHA56_RS22465;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS22465;old_locus_tag=PHA56_22465;partial=true;pseudo=true;start_range=.,4753179 NZ_CP116214.1 Protein Homology CDS 4753179 4753541 . - 0 ID=cds-PHA56_RS22465;Parent=gene-PHA56_RS22465;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024880.2;locus_tag=PHA56_RS22465;partial=true;product=class I SAM-dependent methyltransferase;pseudo=true;start_range=.,4753179;transl_table=11 NZ_CP116214.1 RefSeq gene 4753655 4754206 . - . ID=gene-PHA56_RS22470;Name=PHA56_RS22470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS22470;old_locus_tag=PHA56_22470 NZ_CP116214.1 Protein Homology CDS 4753655 4754206 . - 0 ID=cds-WP_047684097.1;Parent=gene-PHA56_RS22470;Dbxref=Genbank:WP_047684097.1;Name=WP_047684097.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014837489.1;locus_tag=PHA56_RS22470;product=N-acetyltransferase;protein_id=WP_047684097.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4754217 4754474 . - . ID=gene-PHA56_RS22475;Name=PHA56_RS22475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS22475;old_locus_tag=PHA56_22475 NZ_CP116214.1 Protein Homology CDS 4754217 4754474 . - 0 ID=cds-WP_004110819.1;Parent=gene-PHA56_RS22475;Dbxref=Genbank:WP_004110819.1;Name=WP_004110819.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463360.1;locus_tag=PHA56_RS22475;product=YjhX family toxin;protein_id=WP_004110819.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4755150 4756334 . + . ID=gene-PHA56_RS22480;Name=uxuA;gbkey=Gene;gene=uxuA;gene_biotype=protein_coding;locus_tag=PHA56_RS22480;old_locus_tag=PHA56_22480 NZ_CP116214.1 Protein Homology CDS 4755150 4756334 . + 0 ID=cds-WP_014228054.1;Parent=gene-PHA56_RS22480;Dbxref=Genbank:WP_014228054.1;Name=WP_014228054.1;Ontology_term=GO:0006064,GO:0008927;gbkey=CDS;gene=uxuA;go_function=mannonate dehydratase activity|0008927||IEA;go_process=glucuronate catabolic process|0006064||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709912.2;locus_tag=PHA56_RS22480;product=mannonate dehydratase;protein_id=WP_014228054.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4756408 4757883 . + . ID=gene-PHA56_RS22485;Name=PHA56_RS22485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS22485;old_locus_tag=PHA56_22485 NZ_CP116214.1 Protein Homology CDS 4756408 4757883 . + 0 ID=cds-WP_119834689.1;Parent=gene-PHA56_RS22485;Dbxref=Genbank:WP_119834689.1;Name=WP_119834689.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014228053.1;locus_tag=PHA56_RS22485;product=fructuronate reductase;protein_id=WP_119834689.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4758022 4758798 . + . ID=gene-PHA56_RS22490;Name=uxuR;gbkey=Gene;gene=uxuR;gene_biotype=protein_coding;locus_tag=PHA56_RS22490;old_locus_tag=PHA56_22490 NZ_CP116214.1 Protein Homology CDS 4758022 4758798 . + 0 ID=cds-WP_004847986.1;Parent=gene-PHA56_RS22490;Dbxref=Genbank:WP_004847986.1;Name=WP_004847986.1;gbkey=CDS;gene=uxuR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463366.1;locus_tag=PHA56_RS22490;product=Uxu operon transcriptional regulator;protein_id=WP_004847986.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4758951 4759943 . + . ID=gene-PHA56_RS22495;Name=PHA56_RS22495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS22495;old_locus_tag=PHA56_22495 NZ_CP116214.1 Protein Homology CDS 4758951 4759943 . + 0 ID=cds-WP_014228052.1;Parent=gene-PHA56_RS22495;Dbxref=Genbank:WP_014228052.1;Name=WP_014228052.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004110814.1;locus_tag=PHA56_RS22495;product=AraC family transcriptional regulator;protein_id=WP_014228052.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4760065 4762173 . + . ID=gene-PHA56_RS22500;Name=foxA;gbkey=Gene;gene=foxA;gene_biotype=protein_coding;locus_tag=PHA56_RS22500;old_locus_tag=PHA56_22500 NZ_CP116214.1 Protein Homology CDS 4760065 4762173 . + 0 ID=cds-WP_086073898.1;Parent=gene-PHA56_RS22500;Dbxref=Genbank:WP_086073898.1;Name=WP_086073898.1;gbkey=CDS;gene=foxA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459359.1;locus_tag=PHA56_RS22500;product=ferrioxamine B receptor FoxA;protein_id=WP_086073898.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4762216 4762425 . - . ID=gene-PHA56_RS22505;Name=PHA56_RS22505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS22505;old_locus_tag=PHA56_22505 NZ_CP116214.1 Protein Homology CDS 4762216 4762425 . - 0 ID=cds-WP_014228050.1;Parent=gene-PHA56_RS22505;Dbxref=Genbank:WP_014228050.1;Name=WP_014228050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225294.1;locus_tag=PHA56_RS22505;product=Zn-finger protein;protein_id=WP_014228050.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4762730 4764178 . + . ID=gene-PHA56_RS22510;Name=gabD;gbkey=Gene;gene=gabD;gene_biotype=protein_coding;locus_tag=PHA56_RS22510;old_locus_tag=PHA56_22510 NZ_CP116214.1 Protein Homology CDS 4762730 4764178 . + 0 ID=cds-WP_032748090.1;Parent=gene-PHA56_RS22510;Dbxref=Genbank:WP_032748090.1;Name=WP_032748090.1;Ontology_term=GO:0009450,GO:0009013;gbkey=CDS;gene=gabD;go_function=succinate-semialdehyde dehydrogenase [NAD(P)+] activity|0009013||IEA;go_process=gamma-aminobutyric acid catabolic process|0009450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225282.1;locus_tag=PHA56_RS22510;product=NADP-dependent succinate-semialdehyde dehydrogenase;protein_id=WP_032748090.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4764568 4765365 . + . ID=gene-PHA56_RS22515;Name=PHA56_RS22515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS22515;old_locus_tag=PHA56_22515 NZ_CP116214.1 Protein Homology CDS 4764568 4765365 . + 0 ID=cds-WP_271292987.1;Parent=gene-PHA56_RS22515;Dbxref=Genbank:WP_271292987.1;Name=WP_271292987.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025104.2;locus_tag=PHA56_RS22515;product=hypothetical protein;protein_id=WP_271292987.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4765414 4766439 . + . ID=gene-PHA56_RS22520;Name=PHA56_RS22520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS22520;old_locus_tag=PHA56_22520 NZ_CP116214.1 Protein Homology CDS 4765414 4766439 . + 0 ID=cds-WP_040118421.1-5;Parent=gene-PHA56_RS22520;Dbxref=Genbank:WP_040118421.1;Name=WP_040118421.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011144720.1;locus_tag=PHA56_RS22520;product=IS630 family transposase;protein_id=WP_040118421.1;transl_table=11 NZ_CP116214.1 RefSeq pseudogene 4766452 4767021 . + . ID=gene-PHA56_RS22525;Name=PHA56_RS22525;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS22525;old_locus_tag=PHA56_22525;partial=true;pseudo=true;start_range=.,4766452 NZ_CP116214.1 Protein Homology CDS 4766452 4767021 . + 0 ID=cds-PHA56_RS22525;Parent=gene-PHA56_RS22525;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006260,GO:0032508,GO:0003677,GO:0003678,GO:0005524;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA,DNA duplex unwinding|0032508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016809601.1;locus_tag=PHA56_RS22525;partial=true;product=exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase;pseudo=true;start_range=.,4766452;transl_table=11 NZ_CP116214.1 RefSeq gene 4767011 4768297 . + . ID=gene-PHA56_RS22530;Name=PHA56_RS22530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS22530;old_locus_tag=PHA56_22530 NZ_CP116214.1 Protein Homology CDS 4767011 4768297 . + 0 ID=cds-WP_038424099.1;Parent=gene-PHA56_RS22530;Dbxref=Genbank:WP_038424099.1;Name=WP_038424099.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004133795.1;locus_tag=PHA56_RS22530;product=outer membrane beta-barrel protein;protein_id=WP_038424099.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4768294 4768848 . + . ID=gene-PHA56_RS22535;Name=PHA56_RS22535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS22535;old_locus_tag=PHA56_22535 NZ_CP116214.1 Protein Homology CDS 4768294 4768848 . + 0 ID=cds-WP_004847971.1;Parent=gene-PHA56_RS22535;Dbxref=Genbank:WP_004847971.1;Name=WP_004847971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004847971.1;locus_tag=PHA56_RS22535;product=polysaccharide export protein;protein_id=WP_004847971.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4768850 4770937 . + . ID=gene-PHA56_RS22540;Name=PHA56_RS22540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS22540;old_locus_tag=PHA56_22540 NZ_CP116214.1 Protein Homology CDS 4768850 4770937 . + 0 ID=cds-WP_038424098.1;Parent=gene-PHA56_RS22540;Dbxref=Genbank:WP_038424098.1;Name=WP_038424098.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004099205.1;locus_tag=PHA56_RS22540;product=polysaccharide biosynthesis tyrosine autokinase;protein_id=WP_038424098.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4770943 4772160 . + . ID=gene-PHA56_RS22545;Name=PHA56_RS22545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS22545;old_locus_tag=PHA56_22545 NZ_CP116214.1 Protein Homology CDS 4770943 4772160 . + 0 ID=cds-WP_014228045.1;Parent=gene-PHA56_RS22545;Dbxref=Genbank:WP_014228045.1;Name=WP_014228045.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014837480.1;locus_tag=PHA56_RS22545;product=capsular polysaccharide biosynthesis protein;protein_id=WP_014228045.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4772151 4773533 . + . ID=gene-PHA56_RS22550;Name=PHA56_RS22550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS22550;old_locus_tag=PHA56_22550 NZ_CP116214.1 Protein Homology CDS 4772151 4773533 . + 0 ID=cds-WP_014837479.1;Parent=gene-PHA56_RS22550;Dbxref=Genbank:WP_014837479.1;Name=WP_014837479.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014837479.1;locus_tag=PHA56_RS22550;product=hypothetical protein;protein_id=WP_014837479.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4773526 4774551 . + . ID=gene-PHA56_RS22555;Name=PHA56_RS22555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS22555;old_locus_tag=PHA56_22555 NZ_CP116214.1 Protein Homology CDS 4773526 4774551 . + 0 ID=cds-WP_014837478.1;Parent=gene-PHA56_RS22555;Dbxref=Genbank:WP_014837478.1;Name=WP_014837478.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004133808.1;locus_tag=PHA56_RS22555;product=glycosyltransferase;protein_id=WP_014837478.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4774532 4775746 . + . ID=gene-PHA56_RS22560;Name=PHA56_RS22560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS22560;old_locus_tag=PHA56_22560 NZ_CP116214.1 Protein Homology CDS 4774532 4775746 . + 0 ID=cds-WP_032693186.1;Parent=gene-PHA56_RS22560;Dbxref=Genbank:WP_032693186.1;Name=WP_032693186.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004133809.1;locus_tag=PHA56_RS22560;product=glycosyltransferase family 4 protein;protein_id=WP_032693186.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4775743 4776858 . + . ID=gene-PHA56_RS22565;Name=PHA56_RS22565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS22565;old_locus_tag=PHA56_22565 NZ_CP116214.1 Protein Homology CDS 4775743 4776858 . + 0 ID=cds-WP_014228041.1;Parent=gene-PHA56_RS22565;Dbxref=Genbank:WP_014228041.1;Name=WP_014228041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004099196.1;locus_tag=PHA56_RS22565;product=glycosyltransferase family 4 protein;protein_id=WP_014228041.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4776855 4777265 . + . ID=gene-PHA56_RS22570;Name=PHA56_RS22570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS22570;old_locus_tag=PHA56_22570 NZ_CP116214.1 Protein Homology CDS 4776855 4777265 . + 0 ID=cds-WP_014228040.1;Parent=gene-PHA56_RS22570;Dbxref=Genbank:WP_014228040.1;Name=WP_014228040.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014228040.1;locus_tag=PHA56_RS22570;product=hypothetical protein;protein_id=WP_014228040.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4777268 4778686 . + . ID=gene-PHA56_RS22575;Name=PHA56_RS22575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS22575;old_locus_tag=PHA56_22575 NZ_CP116214.1 Protein Homology CDS 4777268 4778686 . + 0 ID=cds-WP_038424097.1;Parent=gene-PHA56_RS22575;Dbxref=Genbank:WP_038424097.1;Name=WP_038424097.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004099192.1;locus_tag=PHA56_RS22575;product=DUF4832 domain-containing protein;protein_id=WP_038424097.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4778689 4779195 . + . ID=gene-PHA56_RS22580;Name=PHA56_RS22580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS22580;old_locus_tag=PHA56_22580 NZ_CP116214.1 Protein Homology CDS 4778689 4779195 . + 0 ID=cds-WP_014228038.1;Parent=gene-PHA56_RS22580;Dbxref=Genbank:WP_014228038.1;Name=WP_014228038.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014228038.1;locus_tag=PHA56_RS22580;product=serine acetyltransferase;protein_id=WP_014228038.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4779278 4779676 . - . ID=gene-PHA56_RS22585;Name=crl;gbkey=Gene;gene=crl;gene_biotype=protein_coding;locus_tag=PHA56_RS22585;old_locus_tag=PHA56_22585 NZ_CP116214.1 Protein Homology CDS 4779278 4779676 . - 0 ID=cds-WP_004847949.1;Parent=gene-PHA56_RS22585;Dbxref=Genbank:WP_004847949.1;Name=WP_004847949.1;Ontology_term=GO:0045893;gbkey=CDS;gene=crl;go_process=positive regulation of DNA-templated transcription|0045893||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225278.1;locus_tag=PHA56_RS22585;product=sigma factor-binding protein Crl;protein_id=WP_004847949.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4779734 4780978 . - . ID=gene-PHA56_RS22590;Name=frsA;gbkey=Gene;gene=frsA;gene_biotype=protein_coding;locus_tag=PHA56_RS22590;old_locus_tag=PHA56_22590 NZ_CP116214.1 Protein Homology CDS 4779734 4780978 . - 0 ID=cds-WP_014837474.1;Parent=gene-PHA56_RS22590;Dbxref=Genbank:WP_014837474.1;Name=WP_014837474.1;Ontology_term=GO:0016788;gbkey=CDS;gene=frsA;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004847945.1;locus_tag=PHA56_RS22590;product=esterase FrsA;protein_id=WP_014837474.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4781085 4781543 . - . ID=gene-PHA56_RS22595;Name=gpt;gbkey=Gene;gene=gpt;gene_biotype=protein_coding;locus_tag=PHA56_RS22595;old_locus_tag=PHA56_22595 NZ_CP116214.1 Protein Homology CDS 4781085 4781543 . - 0 ID=cds-WP_004129200.1;Parent=gene-PHA56_RS22595;Dbxref=Genbank:WP_004129200.1;Name=WP_004129200.1;Ontology_term=GO:0009116,GO:0000310;gbkey=CDS;gene=gpt;go_function=xanthine phosphoribosyltransferase activity|0000310||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225276.1;locus_tag=PHA56_RS22595;product=xanthine phosphoribosyltransferase;protein_id=WP_004129200.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4781802 4783259 . + . ID=gene-PHA56_RS22600;Name=pepD;gbkey=Gene;gene=pepD;gene_biotype=protein_coding;locus_tag=PHA56_RS22600;old_locus_tag=PHA56_22600 NZ_CP116214.1 Protein Homology CDS 4781802 4783259 . + 0 ID=cds-WP_014837473.1;Parent=gene-PHA56_RS22600;Dbxref=Genbank:WP_014837473.1;Name=WP_014837473.1;Ontology_term=GO:0006508,GO:0016787;gbkey=CDS;gene=pepD;go_function=hydrolase activity|0016787||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225275.1;locus_tag=PHA56_RS22600;product=cytosol nonspecific dipeptidase;protein_id=WP_014837473.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4783362 4783826 . - . ID=gene-PHA56_RS22605;Name=PHA56_RS22605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS22605;old_locus_tag=PHA56_22605 NZ_CP116214.1 Protein Homology CDS 4783362 4783826 . - 0 ID=cds-WP_038424096.1;Parent=gene-PHA56_RS22605;Dbxref=Genbank:WP_038424096.1;Name=WP_038424096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004847939.1;locus_tag=PHA56_RS22605;product=GNAT family N-acetyltransferase;protein_id=WP_038424096.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4783829 4784884 . - . ID=gene-PHA56_RS22610;Name=dinB;gbkey=Gene;gene=dinB;gene_biotype=protein_coding;locus_tag=PHA56_RS22610;old_locus_tag=PHA56_22610 NZ_CP116214.1 Protein Homology CDS 4783829 4784884 . - 0 ID=cds-WP_014228034.1;Parent=gene-PHA56_RS22610;Dbxref=Genbank:WP_014228034.1;Name=WP_014228034.1;Ontology_term=GO:0006281,GO:0003684,GO:0003887;gbkey=CDS;gene=dinB;go_function=damaged DNA binding|0003684||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225273.1;locus_tag=PHA56_RS22610;product=DNA polymerase IV;protein_id=WP_014228034.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4785044 4785901 . + . ID=gene-PHA56_RS22615;Name=PHA56_RS22615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS22615;old_locus_tag=PHA56_22615 NZ_CP116214.1 Protein Homology CDS 4785044 4785901 . + 0 ID=cds-WP_014228033.1;Parent=gene-PHA56_RS22615;Dbxref=Genbank:WP_014228033.1;Name=WP_014228033.1;Ontology_term=GO:0006629,GO:0008081;gbkey=CDS;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004099170.1;locus_tag=PHA56_RS22615;product=glycerophosphodiester phosphodiesterase family protein;protein_id=WP_014228033.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4785934 4786149 . - . ID=gene-PHA56_RS22620;Name=nqrM;gbkey=Gene;gene=nqrM;gene_biotype=protein_coding;locus_tag=PHA56_RS22620;old_locus_tag=PHA56_22620 NZ_CP116214.1 Protein Homology CDS 4785934 4786149 . - 0 ID=cds-WP_004847934.1;Parent=gene-PHA56_RS22620;Dbxref=Genbank:WP_004847934.1;Name=WP_004847934.1;gbkey=CDS;gene=nqrM;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225271.1;locus_tag=PHA56_RS22620;product=(Na+)-NQR maturation NqrM;protein_id=WP_004847934.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4786152 4787375 . - . ID=gene-PHA56_RS22625;Name=nqrF;gbkey=Gene;gene=nqrF;gene_biotype=protein_coding;locus_tag=PHA56_RS22625;old_locus_tag=PHA56_22625 NZ_CP116214.1 Protein Homology CDS 4786152 4787375 . - 0 ID=cds-WP_004847931.1;Parent=gene-PHA56_RS22625;Dbxref=Genbank:WP_004847931.1;Name=WP_004847931.1;Ontology_term=GO:0006814,GO:0016655;gbkey=CDS;gene=nqrF;go_function=oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225270.1;locus_tag=PHA56_RS22625;product=NADH:ubiquinone reductase (Na(+)-transporting) subunit F;protein_id=WP_004847931.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4787387 4787983 . - . ID=gene-PHA56_RS22630;Name=nqrE;gbkey=Gene;gene=nqrE;gene_biotype=protein_coding;locus_tag=PHA56_RS22630;old_locus_tag=PHA56_22630 NZ_CP116214.1 Protein Homology CDS 4787387 4787983 . - 0 ID=cds-WP_004847929.1;Parent=gene-PHA56_RS22630;Dbxref=Genbank:WP_004847929.1;Name=WP_004847929.1;Ontology_term=GO:0006814,GO:0016655;gbkey=CDS;gene=nqrE;go_function=oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225269.1;locus_tag=PHA56_RS22630;product=NADH:ubiquinone reductase (Na(+)-transporting) subunit E;protein_id=WP_004847929.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4787990 4788628 . - . ID=gene-PHA56_RS22635;Name=PHA56_RS22635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS22635;old_locus_tag=PHA56_22635 NZ_CP116214.1 Protein Homology CDS 4787990 4788628 . - 0 ID=cds-WP_004099162.1;Parent=gene-PHA56_RS22635;Dbxref=Genbank:WP_004099162.1;Name=WP_004099162.1;Ontology_term=GO:0016655,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225268.1;locus_tag=PHA56_RS22635;product=NADH:ubiquinone reductase (Na(+)-transporting) subunit D;protein_id=WP_004099162.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4788621 4789415 . - . ID=gene-PHA56_RS22640;Name=PHA56_RS22640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS22640;old_locus_tag=PHA56_22640 NZ_CP116214.1 Protein Homology CDS 4788621 4789415 . - 0 ID=cds-WP_004847924.1;Parent=gene-PHA56_RS22640;Dbxref=Genbank:WP_004847924.1;Name=WP_004847924.1;Ontology_term=GO:0006814,GO:0016655,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225267.1;locus_tag=PHA56_RS22640;product=Na(+)-translocating NADH-quinone reductase subunit C;protein_id=WP_004847924.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4789408 4790646 . - . ID=gene-PHA56_RS22645;Name=PHA56_RS22645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS22645;old_locus_tag=PHA56_22645 NZ_CP116214.1 Protein Homology CDS 4789408 4790646 . - 0 ID=cds-WP_004847922.1;Parent=gene-PHA56_RS22645;Dbxref=Genbank:WP_004847922.1;Name=WP_004847922.1;Ontology_term=GO:0022904,GO:0055085,GO:0010181,GO:0016655,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=FMN binding|0010181||IEA,oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA;go_process=respiratory electron transport chain|0022904||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225266.1;locus_tag=PHA56_RS22645;product=NADH:ubiquinone reductase (Na(+)-transporting) subunit B;protein_id=WP_004847922.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4790650 4791993 . - . ID=gene-PHA56_RS22650;Name=PHA56_RS22650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS22650;old_locus_tag=PHA56_22650 NZ_CP116214.1 Protein Homology CDS 4790650 4791993 . - 0 ID=cds-WP_004847919.1;Parent=gene-PHA56_RS22650;Dbxref=Genbank:WP_004847919.1;Name=WP_004847919.1;Ontology_term=GO:0006814,GO:0016655;gbkey=CDS;go_function=oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225265.1;locus_tag=PHA56_RS22650;product=Na(+)-translocating NADH-quinone reductase subunit A;protein_id=WP_004847919.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4792407 4793147 . + . ID=gene-PHA56_RS22655;Name=dpaA;gbkey=Gene;gene=dpaA;gene_biotype=protein_coding;locus_tag=PHA56_RS22655;old_locus_tag=PHA56_22655 NZ_CP116214.1 Protein Homology CDS 4792407 4793147 . + 0 ID=cds-WP_014228031.1;Parent=gene-PHA56_RS22655;Dbxref=Genbank:WP_014228031.1;Name=WP_014228031.1;gbkey=CDS;gene=dpaA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225264.1;locus_tag=PHA56_RS22655;product=peptidoglycan meso-diaminopimelic acid protein amidase;protein_id=WP_014228031.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4793118 4793885 . - . ID=gene-PHA56_RS22660;Name=PHA56_RS22660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS22660;old_locus_tag=PHA56_22660 NZ_CP116214.1 Protein Homology CDS 4793118 4793885 . - 0 ID=cds-WP_004847917.1;Parent=gene-PHA56_RS22660;Dbxref=Genbank:WP_004847917.1;Name=WP_004847917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225263.1;locus_tag=PHA56_RS22660;product=class II glutamine amidotransferase;protein_id=WP_004847917.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4794035 4794616 . - . ID=gene-PHA56_RS22665;Name=lpcA;gbkey=Gene;gene=lpcA;gene_biotype=protein_coding;locus_tag=PHA56_RS22665;old_locus_tag=PHA56_22665 NZ_CP116214.1 Protein Homology CDS 4794035 4794616 . - 0 ID=cds-WP_014837469.1;Parent=gene-PHA56_RS22665;Dbxref=Genbank:WP_014837469.1;Name=WP_014837469.1;Ontology_term=GO:1901135,GO:0008968;gbkey=CDS;gene=lpcA;go_function=D-sedoheptulose 7-phosphate isomerase activity|0008968||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010981422.1;locus_tag=PHA56_RS22665;product=D-sedoheptulose 7-phosphate isomerase;protein_id=WP_014837469.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4794855 4797299 . + . ID=gene-PHA56_RS22670;Name=fadE;gbkey=Gene;gene=fadE;gene_biotype=protein_coding;locus_tag=PHA56_RS22670;old_locus_tag=PHA56_22670 NZ_CP116214.1 Protein Homology CDS 4794855 4797299 . + 0 ID=cds-WP_014837468.1;Parent=gene-PHA56_RS22670;Dbxref=Genbank:WP_014837468.1;Name=WP_014837468.1;Ontology_term=GO:0033539,GO:0003995,GO:0050660;gbkey=CDS;gene=fadE;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=fatty acid beta-oxidation using acyl-CoA dehydrogenase|0033539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225261.1;locus_tag=PHA56_RS22670;product=acyl-CoA dehydrogenase FadE;protein_id=WP_014837468.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4797484 4798254 . + . ID=gene-PHA56_RS22675;Name=PHA56_RS22675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS22675;old_locus_tag=PHA56_22675 NZ_CP116214.1 Protein Homology CDS 4797484 4798254 . + 0 ID=cds-WP_038424095.1;Parent=gene-PHA56_RS22675;Dbxref=Genbank:WP_038424095.1;Name=WP_038424095.1;Ontology_term=GO:0006807;gbkey=CDS;go_process=nitrogen compound metabolic process|0006807||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004847915.1;locus_tag=PHA56_RS22675;product=amidohydrolase;protein_id=WP_038424095.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4798508 4798584 . - . ID=gene-PHA56_RS22680;Name=PHA56_RS22680;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA56_RS22680;old_locus_tag=PHA56_22680 NZ_CP116214.1 tRNAscan-SE tRNA 4798508 4798584 . - . ID=rna-PHA56_RS22680;Parent=gene-PHA56_RS22680;anticodon=(pos:complement(4798548..4798550));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS22680;product=tRNA-Asp NZ_CP116214.1 tRNAscan-SE exon 4798508 4798584 . - . ID=exon-PHA56_RS22680-1;Parent=rna-PHA56_RS22680;anticodon=(pos:complement(4798548..4798550));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS22680;product=tRNA-Asp NZ_CP116214.1 RefSeq gene 4798717 4799448 . - . ID=gene-PHA56_RS22685;Name=dnaQ;gbkey=Gene;gene=dnaQ;gene_biotype=protein_coding;locus_tag=PHA56_RS22685;old_locus_tag=PHA56_22685 NZ_CP116214.1 Protein Homology CDS 4798717 4799448 . - 0 ID=cds-WP_014228028.1;Parent=gene-PHA56_RS22685;Dbxref=Genbank:WP_014228028.1;Name=WP_014228028.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887;gbkey=CDS;gene=dnaQ;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225257.1;locus_tag=PHA56_RS22685;product=DNA polymerase III subunit epsilon;protein_id=WP_014228028.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4799514 4799981 . + . ID=gene-PHA56_RS22690;Name=rnhA;gbkey=Gene;gene=rnhA;gene_biotype=protein_coding;locus_tag=PHA56_RS22690;old_locus_tag=PHA56_22690 NZ_CP116214.1 Protein Homology CDS 4799514 4799981 . + 0 ID=cds-WP_004129160.1;Parent=gene-PHA56_RS22690;Dbxref=Genbank:WP_004129160.1;Name=WP_004129160.1;Ontology_term=GO:0003676,GO:0004523;gbkey=CDS;gene=rnhA;go_function=nucleic acid binding|0003676||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225256.1;locus_tag=PHA56_RS22690;product=ribonuclease HI;protein_id=WP_004129160.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4799978 4800700 . - . ID=gene-PHA56_RS22695;Name=PHA56_RS22695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS22695;old_locus_tag=PHA56_22695 NZ_CP116214.1 Protein Homology CDS 4799978 4800700 . - 0 ID=cds-WP_014228026.1;Parent=gene-PHA56_RS22695;Dbxref=Genbank:WP_014228026.1;Name=WP_014228026.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008805254.1;locus_tag=PHA56_RS22695;product=class I SAM-dependent methyltransferase;protein_id=WP_014228026.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4800733 4801488 . + . ID=gene-PHA56_RS22700;Name=gloB;gbkey=Gene;gene=gloB;gene_biotype=protein_coding;locus_tag=PHA56_RS22700;old_locus_tag=PHA56_22700 NZ_CP116214.1 Protein Homology CDS 4800733 4801488 . + 0 ID=cds-WP_014228025.1;Parent=gene-PHA56_RS22700;Dbxref=Genbank:WP_014228025.1;Name=WP_014228025.1;Ontology_term=GO:0019243,GO:0004416;gbkey=CDS;gene=gloB;go_function=hydroxyacylglutathione hydrolase activity|0004416||IEA;go_process=methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione|0019243||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225254.1;locus_tag=PHA56_RS22700;product=hydroxyacylglutathione hydrolase;protein_id=WP_014228025.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4801560 4802927 . + . ID=gene-PHA56_RS22705;Name=mltD;gbkey=Gene;gene=mltD;gene_biotype=protein_coding;locus_tag=PHA56_RS22705;old_locus_tag=PHA56_22705 NZ_CP116214.1 Protein Homology CDS 4801560 4802927 . + 0 ID=cds-WP_014228024.1;Parent=gene-PHA56_RS22705;Dbxref=Genbank:WP_014228024.1;Name=WP_014228024.1;Ontology_term=GO:0000270,GO:0008933,GO:0016020;gbkey=CDS;gene=mltD;go_component=membrane|0016020||IEA;go_function=lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308234.1;locus_tag=PHA56_RS22705;product=murein transglycosylase D;protein_id=WP_014228024.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4802985 4803755 . - . ID=gene-PHA56_RS22710;Name=PHA56_RS22710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS22710;old_locus_tag=PHA56_22710 NZ_CP116214.1 Protein Homology CDS 4802985 4803755 . - 0 ID=cds-WP_014228023.1;Parent=gene-PHA56_RS22710;Dbxref=Genbank:WP_014228023.1;Name=WP_014228023.1;Ontology_term=GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225252.1;locus_tag=PHA56_RS22710;product=class I SAM-dependent methyltransferase;protein_id=WP_014228023.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4803841 4804638 . - . ID=gene-PHA56_RS22715;Name=PHA56_RS22715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS22715;old_locus_tag=PHA56_22715 NZ_CP116214.1 Protein Homology CDS 4803841 4804638 . - 0 ID=cds-WP_025108464.1;Parent=gene-PHA56_RS22715;Dbxref=Genbank:WP_025108464.1;Name=WP_025108464.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225251.1;locus_tag=PHA56_RS22715;product=endonuclease/exonuclease/phosphatase family protein;protein_id=WP_025108464.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4804744 4805934 . - . ID=gene-PHA56_RS22720;Name=PHA56_RS22720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS22720;old_locus_tag=PHA56_22720 NZ_CP116214.1 Protein Homology CDS 4804744 4805934 . - 0 ID=cds-WP_014228021.1;Parent=gene-PHA56_RS22720;Dbxref=Genbank:WP_014228021.1;Name=WP_014228021.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225250.1;locus_tag=PHA56_RS22720;product=MFS transporter;protein_id=WP_014228021.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4806039 4806941 . + . ID=gene-PHA56_RS22725;Name=yafC;gbkey=Gene;gene=yafC;gene_biotype=protein_coding;locus_tag=PHA56_RS22725;old_locus_tag=PHA56_22725 NZ_CP116214.1 Protein Homology CDS 4806039 4806941 . + 0 ID=cds-WP_014228020.1;Parent=gene-PHA56_RS22725;Dbxref=Genbank:WP_014228020.1;Name=WP_014228020.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=yafC;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004847906.1;locus_tag=PHA56_RS22725;product=DNA-binding transcriptional regulator YafC;protein_id=WP_014228020.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4806972 4807775 . - . ID=gene-PHA56_RS22730;Name=dkgB;gbkey=Gene;gene=dkgB;gene_biotype=protein_coding;locus_tag=PHA56_RS22730;old_locus_tag=PHA56_22730 NZ_CP116214.1 Protein Homology CDS 4806972 4807775 . - 0 ID=cds-WP_271292936.1;Parent=gene-PHA56_RS22730;Dbxref=Genbank:WP_271292936.1;Name=WP_271292936.1;Ontology_term=GO:0047834;gbkey=CDS;gene=dkgB;go_function=D-threo-aldose 1-dehydrogenase activity|0047834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225248.1;locus_tag=PHA56_RS22730;product=2%2C5-didehydrogluconate reductase DkgB;protein_id=WP_271292936.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4807939 4808015 . - . ID=gene-PHA56_RS22735;Name=PHA56_RS22735;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA56_RS22735;old_locus_tag=PHA56_22735 NZ_CP116214.1 tRNAscan-SE tRNA 4807939 4808015 . - . ID=rna-PHA56_RS22735;Parent=gene-PHA56_RS22735;anticodon=(pos:complement(4807979..4807981));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS22735;product=tRNA-Asp NZ_CP116214.1 tRNAscan-SE exon 4807939 4808015 . - . ID=exon-PHA56_RS22735-1;Parent=rna-PHA56_RS22735;anticodon=(pos:complement(4807979..4807981));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS22735;product=tRNA-Asp NZ_CP116214.1 RefSeq gene 4808071 4808186 . - . ID=gene-PHA56_RS22740;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=PHA56_RS22740;old_locus_tag=PHA56_22740 NZ_CP116214.1 cmsearch rRNA 4808071 4808186 . - . ID=rna-PHA56_RS22740;Parent=gene-PHA56_RS22740;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA56_RS22740;product=5S ribosomal RNA NZ_CP116214.1 cmsearch exon 4808071 4808186 . - . ID=exon-PHA56_RS22740-1;Parent=rna-PHA56_RS22740;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA56_RS22740;product=5S ribosomal RNA NZ_CP116214.1 RefSeq gene 4808291 4811196 . - . ID=gene-PHA56_RS22745;Name=PHA56_RS22745;gbkey=Gene;gene_biotype=rRNA;locus_tag=PHA56_RS22745;old_locus_tag=PHA56_22745 NZ_CP116214.1 cmsearch rRNA 4808291 4811196 . - . ID=rna-PHA56_RS22745;Parent=gene-PHA56_RS22745;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA56_RS22745;product=23S ribosomal RNA NZ_CP116214.1 cmsearch exon 4808291 4811196 . - . ID=exon-PHA56_RS22745-1;Parent=rna-PHA56_RS22745;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA56_RS22745;product=23S ribosomal RNA NZ_CP116214.1 RefSeq gene 4811375 4811450 . - . ID=gene-PHA56_RS22750;Name=PHA56_RS22750;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA56_RS22750;old_locus_tag=PHA56_22750 NZ_CP116214.1 tRNAscan-SE tRNA 4811375 4811450 . - . ID=rna-PHA56_RS22750;Parent=gene-PHA56_RS22750;anticodon=(pos:complement(4811415..4811417));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS22750;product=tRNA-Ala NZ_CP116214.1 tRNAscan-SE exon 4811375 4811450 . - . ID=exon-PHA56_RS22750-1;Parent=rna-PHA56_RS22750;anticodon=(pos:complement(4811415..4811417));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS22750;product=tRNA-Ala NZ_CP116214.1 RefSeq gene 4811558 4811634 . - . ID=gene-PHA56_RS22755;Name=PHA56_RS22755;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA56_RS22755;old_locus_tag=PHA56_22755 NZ_CP116214.1 tRNAscan-SE tRNA 4811558 4811634 . - . ID=rna-PHA56_RS22755;Parent=gene-PHA56_RS22755;anticodon=(pos:complement(4811598..4811600));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS22755;product=tRNA-Ile NZ_CP116214.1 tRNAscan-SE exon 4811558 4811634 . - . ID=exon-PHA56_RS22755-1;Parent=rna-PHA56_RS22755;anticodon=(pos:complement(4811598..4811600));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS22755;product=tRNA-Ile NZ_CP116214.1 RefSeq gene 4811706 4813245 . - . ID=gene-PHA56_RS22760;Name=PHA56_RS22760;gbkey=Gene;gene_biotype=rRNA;locus_tag=PHA56_RS22760;old_locus_tag=PHA56_22760 NZ_CP116214.1 cmsearch rRNA 4811706 4813245 . - . ID=rna-PHA56_RS22760;Parent=gene-PHA56_RS22760;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA56_RS22760;product=16S ribosomal RNA NZ_CP116214.1 cmsearch exon 4811706 4813245 . - . ID=exon-PHA56_RS22760-1;Parent=rna-PHA56_RS22760;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA56_RS22760;product=16S ribosomal RNA NZ_CP116214.1 RefSeq gene 4813615 4814181 . - . ID=gene-PHA56_RS22765;Name=gmhB;gbkey=Gene;gene=gmhB;gene_biotype=protein_coding;locus_tag=PHA56_RS22765;old_locus_tag=PHA56_22765 NZ_CP116214.1 Protein Homology CDS 4813615 4814181 . - 0 ID=cds-WP_014837457.1;Parent=gene-PHA56_RS22765;Dbxref=Genbank:WP_014837457.1;Name=WP_014837457.1;Ontology_term=GO:0005975,GO:0016791;gbkey=CDS;gene=gmhB;go_function=phosphatase activity|0016791||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225247.1;locus_tag=PHA56_RS22765;product=D-glycero-beta-D-manno-heptose 1%2C7-bisphosphate 7-phosphatase;protein_id=WP_014837457.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4814370 4815401 . + . ID=gene-PHA56_RS22770;Name=metN;gbkey=Gene;gene=metN;gene_biotype=protein_coding;locus_tag=PHA56_RS22770;old_locus_tag=PHA56_22770 NZ_CP116214.1 Protein Homology CDS 4814370 4815401 . + 0 ID=cds-WP_004098793.1;Parent=gene-PHA56_RS22770;Dbxref=Genbank:WP_004098793.1;Name=WP_004098793.1;Ontology_term=GO:0048473,GO:0005524,GO:0033232,GO:0009898,GO:0055052;gbkey=CDS;gene=metN;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ABC-type D-methionine transporter activity|0033232||IEA;go_process=D-methionine transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014168731.1;locus_tag=PHA56_RS22770;product=methionine ABC transporter ATP-binding protein MetN;protein_id=WP_004098793.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4815394 4816047 . + . ID=gene-PHA56_RS22775;Name=PHA56_RS22775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS22775;old_locus_tag=PHA56_22775 NZ_CP116214.1 Protein Homology CDS 4815394 4816047 . + 0 ID=cds-WP_004098792.1;Parent=gene-PHA56_RS22775;Dbxref=Genbank:WP_004098792.1;Name=WP_004098792.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132073.1;locus_tag=PHA56_RS22775;product=methionine ABC transporter permease MetI;protein_id=WP_004098792.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4816087 4816902 . + . ID=gene-PHA56_RS22780;Name=metQ;gbkey=Gene;gene=metQ;gene_biotype=protein_coding;locus_tag=PHA56_RS22780;old_locus_tag=PHA56_22780 NZ_CP116214.1 Protein Homology CDS 4816087 4816902 . + 0 ID=cds-WP_004098791.1;Parent=gene-PHA56_RS22780;Dbxref=Genbank:WP_004098791.1;Name=WP_004098791.1;gbkey=CDS;gene=metQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016534993.1;locus_tag=PHA56_RS22780;product=methionine ABC transporter substrate-binding lipoprotein MetQ;protein_id=WP_004098791.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4817011 4817418 . + . ID=gene-PHA56_RS22785;Name=rcsF;gbkey=Gene;gene=rcsF;gene_biotype=protein_coding;locus_tag=PHA56_RS22785;old_locus_tag=PHA56_22785 NZ_CP116214.1 Protein Homology CDS 4817011 4817418 . + 0 ID=cds-WP_004098790.1;Parent=gene-PHA56_RS22785;Dbxref=Genbank:WP_004098790.1;Name=WP_004098790.1;gbkey=CDS;gene=rcsF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414738.1;locus_tag=PHA56_RS22785;product=Rcs stress response system protein RcsF;protein_id=WP_004098790.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4817415 4818122 . + . ID=gene-PHA56_RS22790;Name=tsaA;gbkey=Gene;gene=tsaA;gene_biotype=protein_coding;locus_tag=PHA56_RS22790;old_locus_tag=PHA56_22790 NZ_CP116214.1 Protein Homology CDS 4817415 4818122 . + 0 ID=cds-WP_032748069.1;Parent=gene-PHA56_RS22790;Dbxref=Genbank:WP_032748069.1;Name=WP_032748069.1;Ontology_term=GO:0006400,GO:0008757,GO:0005737;gbkey=CDS;gene=tsaA;go_component=cytoplasm|0005737||IEA;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225242.1;locus_tag=PHA56_RS22790;product=tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO;protein_id=WP_032748069.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4818233 4819951 . + . ID=gene-PHA56_RS22795;Name=proS;gbkey=Gene;gene=proS;gene_biotype=protein_coding;locus_tag=PHA56_RS22795;old_locus_tag=PHA56_22795 NZ_CP116214.1 Protein Homology CDS 4818233 4819951 . + 0 ID=cds-WP_038424094.1;Parent=gene-PHA56_RS22795;Dbxref=Genbank:WP_038424094.1;Name=WP_038424094.1;Ontology_term=GO:0006433,GO:0004827,GO:0005737;gbkey=CDS;gene=proS;go_component=cytoplasm|0005737||IEA;go_function=proline-tRNA ligase activity|0004827||IEA;go_process=prolyl-tRNA aminoacylation|0006433||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133963.1;locus_tag=PHA56_RS22795;product=proline--tRNA ligase;protein_id=WP_038424094.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4820003 4820824 . + . ID=gene-PHA56_RS22800;Name=PHA56_RS22800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS22800;old_locus_tag=PHA56_22800 NZ_CP116214.1 Protein Homology CDS 4820003 4820824 . + 0 ID=cds-WP_038424093.1;Parent=gene-PHA56_RS22800;Dbxref=Genbank:WP_038424093.1;Name=WP_038424093.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004129142.1;locus_tag=PHA56_RS22800;product=YaeF family permuted papain-like enzyme;protein_id=WP_038424093.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4820825 4821526 . - . ID=gene-PHA56_RS22805;Name=nlpE;gbkey=Gene;gene=nlpE;gene_biotype=protein_coding;gene_synonym=cutF;locus_tag=PHA56_RS22805;old_locus_tag=PHA56_22805 NZ_CP116214.1 Protein Homology CDS 4820825 4821526 . - 0 ID=cds-WP_086074134.1;Parent=gene-PHA56_RS22805;Dbxref=Genbank:WP_086074134.1;Name=WP_086074134.1;Note=NlpE%2C an outer membrane lipoprotein%2C interacts directly with CpxA%2C the sensor histidine kinase of the Cpx system for response to envelope stress.;gbkey=CDS;gene=nlpE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014228013.1;locus_tag=PHA56_RS22805;product=envelope stress response activation lipoprotein NlpE;protein_id=WP_086074134.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4821568 4821981 . - . ID=gene-PHA56_RS22810;Name=arfB;gbkey=Gene;gene=arfB;gene_biotype=protein_coding;locus_tag=PHA56_RS22810;old_locus_tag=PHA56_22810 NZ_CP116214.1 Protein Homology CDS 4821568 4821981 . - 0 ID=cds-WP_038424092.1;Parent=gene-PHA56_RS22810;Dbxref=Genbank:WP_038424092.1;Name=WP_038424092.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=arfB;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014228012.1;locus_tag=PHA56_RS22810;product=alternative ribosome rescue aminoacyl-tRNA hydrolase ArfB;protein_id=WP_038424092.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4821978 4822523 . - . ID=gene-PHA56_RS22815;Name=PHA56_RS22815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS22815;old_locus_tag=PHA56_22815 NZ_CP116214.1 Protein Homology CDS 4821978 4822523 . - 0 ID=cds-WP_038424091.1;Parent=gene-PHA56_RS22815;Dbxref=Genbank:WP_038424091.1;Name=WP_038424091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225237.1;locus_tag=PHA56_RS22815;product=YaeQ family protein;protein_id=WP_038424091.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4822720 4822920 . + . ID=gene-PHA56_RS22820;Name=PHA56_RS22820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS22820;old_locus_tag=PHA56_22820 NZ_CP116214.1 Protein Homology CDS 4822720 4822920 . + 0 ID=cds-WP_004098778.1;Parent=gene-PHA56_RS22820;Dbxref=Genbank:WP_004098778.1;Name=WP_004098778.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133967.1;locus_tag=PHA56_RS22820;product=YaeP family protein;protein_id=WP_004098778.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4822907 4823167 . + . ID=gene-PHA56_RS22825;Name=rof;gbkey=Gene;gene=rof;gene_biotype=protein_coding;locus_tag=PHA56_RS22825;old_locus_tag=PHA56_22825 NZ_CP116214.1 Protein Homology CDS 4822907 4823167 . + 0 ID=cds-WP_004098776.1;Parent=gene-PHA56_RS22825;Dbxref=Genbank:WP_004098776.1;Name=WP_004098776.1;gbkey=CDS;gene=rof;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225236.1;locus_tag=PHA56_RS22825;product=Rho-binding antiterminator;protein_id=WP_004098776.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4823183 4824484 . - . ID=gene-PHA56_RS22830;Name=tilS;gbkey=Gene;gene=tilS;gene_biotype=protein_coding;locus_tag=PHA56_RS22830;old_locus_tag=PHA56_22830 NZ_CP116214.1 Protein Homology CDS 4823183 4824484 . - 0 ID=cds-WP_038424944.1;Parent=gene-PHA56_RS22830;Dbxref=Genbank:WP_038424944.1;Name=WP_038424944.1;Ontology_term=GO:0008033,GO:0000166,GO:0005524,GO:0016879;gbkey=CDS;gene=tilS;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA,ligase activity%2C forming carbon-nitrogen bonds|0016879||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015704454.1;locus_tag=PHA56_RS22830;product=tRNA lysidine(34) synthetase TilS;protein_id=WP_038424944.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4824554 4824943 . - . ID=gene-PHA56_RS22835;Name=PHA56_RS22835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS22835;old_locus_tag=PHA56_22835 NZ_CP116214.1 Protein Homology CDS 4824554 4824943 . - 0 ID=cds-WP_004098774.1;Parent=gene-PHA56_RS22835;Dbxref=Genbank:WP_004098774.1;Name=WP_004098774.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225234.1;locus_tag=PHA56_RS22835;product=VOC family protein;protein_id=WP_004098774.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4825006 4827144 . - . ID=gene-PHA56_RS22840;Name=PHA56_RS22840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS22840;old_locus_tag=PHA56_22840 NZ_CP116214.1 Protein Homology CDS 4825006 4827144 . - 0 ID=cds-WP_014228008.1;Parent=gene-PHA56_RS22840;Dbxref=Genbank:WP_014228008.1;Name=WP_014228008.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014228008.1;locus_tag=PHA56_RS22840;product=lysine decarboxylase LdcC;protein_id=WP_014228008.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4827220 4829010 . - . ID=gene-PHA56_RS22845;Name=PHA56_RS22845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS22845;old_locus_tag=PHA56_22845 NZ_CP116214.1 Protein Homology CDS 4827220 4829010 . - 0 ID=cds-WP_014228007.1;Parent=gene-PHA56_RS22845;Dbxref=Genbank:WP_014228007.1;Name=WP_014228007.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459238.1;locus_tag=PHA56_RS22845;product=chitinase;protein_id=WP_014228007.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4829201 4830160 . - . ID=gene-PHA56_RS22850;Name=accA;gbkey=Gene;gene=accA;gene_biotype=protein_coding;locus_tag=PHA56_RS22850;old_locus_tag=PHA56_22850 NZ_CP116214.1 Protein Homology CDS 4829201 4830160 . - 0 ID=cds-WP_004098771.1;Parent=gene-PHA56_RS22850;Dbxref=Genbank:WP_004098771.1;Name=WP_004098771.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accA;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132091.1;locus_tag=PHA56_RS22850;product=acetyl-CoA carboxylase carboxyl transferase subunit alpha;protein_id=WP_004098771.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4830173 4833655 . - . ID=gene-PHA56_RS22855;Name=dnaE;gbkey=Gene;gene=dnaE;gene_biotype=protein_coding;locus_tag=PHA56_RS22855;old_locus_tag=PHA56_22855 NZ_CP116214.1 Protein Homology CDS 4830173 4833655 . - 0 ID=cds-WP_009654544.1;Parent=gene-PHA56_RS22855;Dbxref=Genbank:WP_009654544.1;Name=WP_009654544.1;Ontology_term=GO:0006260,GO:0003676,GO:0008408;gbkey=CDS;gene=dnaE;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225231.1;locus_tag=PHA56_RS22855;product=DNA polymerase III subunit alpha;protein_id=WP_009654544.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4833694 4834290 . - . ID=gene-PHA56_RS22860;Name=rnhB;gbkey=Gene;gene=rnhB;gene_biotype=protein_coding;locus_tag=PHA56_RS22860;old_locus_tag=PHA56_22860 NZ_CP116214.1 Protein Homology CDS 4833694 4834290 . - 0 ID=cds-WP_014228005.1;Parent=gene-PHA56_RS22860;Dbxref=Genbank:WP_014228005.1;Name=WP_014228005.1;Ontology_term=GO:0003723,GO:0004523;gbkey=CDS;gene=rnhB;go_function=RNA binding|0003723||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414725.1;locus_tag=PHA56_RS22860;product=ribonuclease HII;protein_id=WP_014228005.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4834287 4835435 . - . ID=gene-PHA56_RS22865;Name=lpxB;gbkey=Gene;gene=lpxB;gene_biotype=protein_coding;locus_tag=PHA56_RS22865;old_locus_tag=PHA56_22865 NZ_CP116214.1 Protein Homology CDS 4834287 4835435 . - 0 ID=cds-WP_004098764.1;Parent=gene-PHA56_RS22865;Dbxref=Genbank:WP_004098764.1;Name=WP_004098764.1;Ontology_term=GO:0009245,GO:0008915;gbkey=CDS;gene=lpxB;go_function=lipid-A-disaccharide synthase activity|0008915||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001527566.1;locus_tag=PHA56_RS22865;product=lipid-A-disaccharide synthase;protein_id=WP_004098764.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4835435 4836223 . - . ID=gene-PHA56_RS22870;Name=lpxA;gbkey=Gene;gene=lpxA;gene_biotype=protein_coding;locus_tag=PHA56_RS22870;old_locus_tag=PHA56_22870 NZ_CP116214.1 Protein Homology CDS 4835435 4836223 . - 0 ID=cds-WP_004098763.1;Parent=gene-PHA56_RS22870;Dbxref=Genbank:WP_004098763.1;Name=WP_004098763.1;Ontology_term=GO:0008610,GO:0008780;gbkey=CDS;gene=lpxA;go_function=acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity|0008780||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132096.1;locus_tag=PHA56_RS22870;product=acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase;protein_id=WP_004098763.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4836227 4836682 . - . ID=gene-PHA56_RS22875;Name=fabZ;gbkey=Gene;gene=fabZ;gene_biotype=protein_coding;locus_tag=PHA56_RS22875;old_locus_tag=PHA56_22875 NZ_CP116214.1 Protein Homology CDS 4836227 4836682 . - 0 ID=cds-WP_004098761.1;Parent=gene-PHA56_RS22875;Dbxref=Genbank:WP_004098761.1;Name=WP_004098761.1;gbkey=CDS;gene=fabZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000210741.1;locus_tag=PHA56_RS22875;product=3-hydroxyacyl-ACP dehydratase FabZ;protein_id=WP_004098761.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4836785 4837810 . - . ID=gene-PHA56_RS22880;Name=lpxD;gbkey=Gene;gene=lpxD;gene_biotype=protein_coding;locus_tag=PHA56_RS22880;old_locus_tag=PHA56_22880 NZ_CP116214.1 Protein Homology CDS 4836785 4837810 . - 0 ID=cds-WP_014837448.1;Parent=gene-PHA56_RS22880;Dbxref=Genbank:WP_014837448.1;Name=WP_014837448.1;Ontology_term=GO:0009245,GO:0016410;gbkey=CDS;gene=lpxD;go_function=N-acyltransferase activity|0016410||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132101.1;locus_tag=PHA56_RS22880;product=UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase;protein_id=WP_014837448.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4837814 4838299 . - . ID=gene-PHA56_RS22885;Name=skp;gbkey=Gene;gene=skp;gene_biotype=protein_coding;gene_synonym=hlpA,ompH;locus_tag=PHA56_RS22885;old_locus_tag=PHA56_22885 NZ_CP116214.1 Protein Homology CDS 4837814 4838299 . - 0 ID=cds-WP_004098757.1;Parent=gene-PHA56_RS22885;Dbxref=Genbank:WP_004098757.1;Name=WP_004098757.1;gbkey=CDS;gene=skp;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225225.1;locus_tag=PHA56_RS22885;product=molecular chaperone Skp;protein_id=WP_004098757.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4838430 4840859 . - . ID=gene-PHA56_RS22890;Name=bamA;gbkey=Gene;gene=bamA;gene_biotype=protein_coding;locus_tag=PHA56_RS22890;old_locus_tag=PHA56_22890 NZ_CP116214.1 Protein Homology CDS 4838430 4840859 . - 0 ID=cds-WP_032694381.1;Parent=gene-PHA56_RS22890;Dbxref=Genbank:WP_032694381.1;Name=WP_032694381.1;Ontology_term=GO:0009279;gbkey=CDS;gene=bamA;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225224.1;locus_tag=PHA56_RS22890;product=outer membrane protein assembly factor BamA;protein_id=WP_032694381.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4840891 4842243 . - . ID=gene-PHA56_RS22895;Name=rseP;gbkey=Gene;gene=rseP;gene_biotype=protein_coding;locus_tag=PHA56_RS22895;old_locus_tag=PHA56_22895 NZ_CP116214.1 Protein Homology CDS 4840891 4842243 . - 0 ID=cds-WP_014228001.1;Parent=gene-PHA56_RS22895;Dbxref=Genbank:WP_014228001.1;Name=WP_014228001.1;Ontology_term=GO:0006508,GO:0004222,GO:0005515,GO:0016020;gbkey=CDS;gene=rseP;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,protein binding|0005515||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132106.1;locus_tag=PHA56_RS22895;product=sigma E protease regulator RseP;protein_id=WP_014228001.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4842255 4843112 . - . ID=gene-PHA56_RS22900;Name=cdsA;gbkey=Gene;gene=cdsA;gene_biotype=protein_coding;locus_tag=PHA56_RS22900;old_locus_tag=PHA56_22900 NZ_CP116214.1 Protein Homology CDS 4842255 4843112 . - 0 ID=cds-WP_014228000.1;Parent=gene-PHA56_RS22900;Dbxref=Genbank:WP_014228000.1;Name=WP_014228000.1;Ontology_term=GO:0016772;gbkey=CDS;gene=cdsA;go_function=transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225222.1;locus_tag=PHA56_RS22900;product=phosphatidate cytidylyltransferase;protein_id=WP_014228000.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4843125 4843883 . - . ID=gene-PHA56_RS22905;Name=ispU;gbkey=Gene;gene=ispU;gene_biotype=protein_coding;gene_synonym=uppS;locus_tag=PHA56_RS22905;old_locus_tag=PHA56_22905 NZ_CP116214.1 Protein Homology CDS 4843125 4843883 . - 0 ID=cds-WP_004098751.1;Parent=gene-PHA56_RS22905;Dbxref=Genbank:WP_004098751.1;Name=WP_004098751.1;Ontology_term=GO:0043164,GO:0002094,GO:0008834;gbkey=CDS;gene=ispU;go_function=polyprenyltransferase activity|0002094||IEA,di-trans%2Cpoly-cis-decaprenylcistransferase activity|0008834||IEA;go_process=Gram-negative-bacterium-type cell wall biogenesis|0043164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002889316.1;locus_tag=PHA56_RS22905;product=(2E%2C6E)-farnesyl-diphosphate-specific ditrans%2Cpolycis-undecaprenyl-diphosphate synthase;protein_id=WP_004098751.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4844126 4845325 . - . ID=gene-PHA56_RS22910;Name=ispC;gbkey=Gene;gene=ispC;gene_biotype=protein_coding;locus_tag=PHA56_RS22910;old_locus_tag=PHA56_22910 NZ_CP116214.1 Protein Homology CDS 4844126 4845325 . - 0 ID=cds-WP_014227999.1;Parent=gene-PHA56_RS22910;Dbxref=Genbank:WP_014227999.1;Name=WP_014227999.1;Ontology_term=GO:0008299,GO:0005515,GO:0030604,GO:0046872,GO:0070402;gbkey=CDS;gene=ispC;go_function=protein binding|0005515||IEA,1-deoxy-D-xylulose-5-phosphate reductoisomerase activity|0030604||IEA,metal ion binding|0046872||IEA,NADPH binding|0070402||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016807402.1;locus_tag=PHA56_RS22910;product=1-deoxy-D-xylulose-5-phosphate reductoisomerase;protein_id=WP_014227999.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4845552 4846109 . - . ID=gene-PHA56_RS22915;Name=frr;gbkey=Gene;gene=frr;gene_biotype=protein_coding;locus_tag=PHA56_RS22915;old_locus_tag=PHA56_22915 NZ_CP116214.1 Protein Homology CDS 4845552 4846109 . - 0 ID=cds-WP_004098748.1;Parent=gene-PHA56_RS22915;Dbxref=Genbank:WP_004098748.1;Name=WP_004098748.1;Ontology_term=GO:0006412,GO:0008135,GO:0005737;gbkey=CDS;gene=frr;go_component=cytoplasm|0005737||IEA;go_function=translation factor activity%2C RNA binding|0008135||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000622421.1;locus_tag=PHA56_RS22915;product=ribosome recycling factor;protein_id=WP_004098748.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4846315 4847040 . - . ID=gene-PHA56_RS22920;Name=pyrH;gbkey=Gene;gene=pyrH;gene_biotype=protein_coding;locus_tag=PHA56_RS22920;old_locus_tag=PHA56_22920 NZ_CP116214.1 Protein Homology CDS 4846315 4847040 . - 0 ID=cds-WP_004098747.1;Parent=gene-PHA56_RS22920;Dbxref=Genbank:WP_004098747.1;Name=WP_004098747.1;Ontology_term=GO:0015949,GO:0033862;gbkey=CDS;gene=pyrH;go_function=UMP kinase activity|0033862||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000224576.1;locus_tag=PHA56_RS22920;product=UMP kinase;protein_id=WP_004098747.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4847187 4848038 . - . ID=gene-PHA56_RS22925;Name=tsf;gbkey=Gene;gene=tsf;gene_biotype=protein_coding;locus_tag=PHA56_RS22925;old_locus_tag=PHA56_22925 NZ_CP116214.1 Protein Homology CDS 4847187 4848038 . - 0 ID=cds-WP_004098746.1;Parent=gene-PHA56_RS22925;Dbxref=Genbank:WP_004098746.1;Name=WP_004098746.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tsf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132116.1;locus_tag=PHA56_RS22925;product=translation elongation factor Ts;protein_id=WP_004098746.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4848158 4848883 . - . ID=gene-PHA56_RS22930;Name=rpsB;gbkey=Gene;gene=rpsB;gene_biotype=protein_coding;locus_tag=PHA56_RS22930;old_locus_tag=PHA56_22930 NZ_CP116214.1 Protein Homology CDS 4848158 4848883 . - 0 ID=cds-WP_003856207.1;Parent=gene-PHA56_RS22930;Dbxref=Genbank:WP_003856207.1;Name=WP_003856207.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsB;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132117.1;locus_tag=PHA56_RS22930;product=30S ribosomal protein S2;protein_id=WP_003856207.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4849207 4850001 . + . ID=gene-PHA56_RS22935;Name=map;gbkey=Gene;gene=map;gene_biotype=protein_coding;locus_tag=PHA56_RS22935;old_locus_tag=PHA56_22935 NZ_CP116214.1 Protein Homology CDS 4849207 4850001 . + 0 ID=cds-WP_004098745.1;Parent=gene-PHA56_RS22935;Dbxref=Genbank:WP_004098745.1;Name=WP_004098745.1;Ontology_term=GO:0036211;gbkey=CDS;gene=map;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225215.1;locus_tag=PHA56_RS22935;product=type I methionyl aminopeptidase;protein_id=WP_004098745.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4850193 4852856 . + . ID=gene-PHA56_RS22940;Name=glnD;gbkey=Gene;gene=glnD;gene_biotype=protein_coding;locus_tag=PHA56_RS22940;old_locus_tag=PHA56_22940 NZ_CP116214.1 Protein Homology CDS 4850193 4852856 . + 0 ID=cds-WP_032694385.1;Parent=gene-PHA56_RS22940;Dbxref=Genbank:WP_032694385.1;Name=WP_032694385.1;Ontology_term=GO:0006807,GO:0016779;gbkey=CDS;gene=glnD;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=nitrogen compound metabolic process|0006807||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017144947.1;locus_tag=PHA56_RS22940;product=bifunctional uridylyltransferase/uridylyl-removing protein GlnD;protein_id=WP_032694385.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4852890 4853714 . + . ID=gene-PHA56_RS22945;Name=dapD;gbkey=Gene;gene=dapD;gene_biotype=protein_coding;locus_tag=PHA56_RS22945;old_locus_tag=PHA56_22945 NZ_CP116214.1 Protein Homology CDS 4852890 4853714 . + 0 ID=cds-WP_004098743.1;Parent=gene-PHA56_RS22945;Dbxref=Genbank:WP_004098743.1;Name=WP_004098743.1;Ontology_term=GO:0009089,GO:0008666;gbkey=CDS;gene=dapD;go_function=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase activity|0008666||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132123.1;locus_tag=PHA56_RS22945;product=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase;protein_id=WP_004098743.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4853822 4854211 . + . ID=gene-PHA56_RS22950;Name=PHA56_RS22950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS22950;old_locus_tag=PHA56_22950 NZ_CP116214.1 Protein Homology CDS 4853822 4854211 . + 0 ID=cds-WP_004098742.1;Parent=gene-PHA56_RS22950;Dbxref=Genbank:WP_004098742.1;Name=WP_004098742.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004098742.1;locus_tag=PHA56_RS22950;product=DUF3461 family protein;protein_id=WP_004098742.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4854408 4857386 . + . ID=gene-PHA56_RS22955;Name=PHA56_RS22955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS22955;old_locus_tag=PHA56_22955 NZ_CP116214.1 Protein Homology CDS 4854408 4857386 . + 0 ID=cds-WP_038424089.1;Parent=gene-PHA56_RS22955;Dbxref=Genbank:WP_038424089.1;Name=WP_038424089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017144948.1;locus_tag=PHA56_RS22955;product=putative mucin/carbohydrate-binding domain-containing protein;protein_id=WP_038424089.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4857423 4858580 . - . ID=gene-PHA56_RS22960;Name=cdaR;gbkey=Gene;gene=cdaR;gene_biotype=protein_coding;locus_tag=PHA56_RS22960;old_locus_tag=PHA56_22960 NZ_CP116214.1 Protein Homology CDS 4857423 4858580 . - 0 ID=cds-WP_004098741.1;Parent=gene-PHA56_RS22960;Dbxref=Genbank:WP_004098741.1;Name=WP_004098741.1;gbkey=CDS;gene=cdaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459215.1;locus_tag=PHA56_RS22960;product=DNA-binding transcriptional regulator CdaR;protein_id=WP_004098741.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4858772 4860211 . - . ID=gene-PHA56_RS22965;Name=degP;gbkey=Gene;gene=degP;gene_biotype=protein_coding;locus_tag=PHA56_RS22965;old_locus_tag=PHA56_22965 NZ_CP116214.1 Protein Homology CDS 4858772 4860211 . - 0 ID=cds-WP_004098740.1;Parent=gene-PHA56_RS22965;Dbxref=Genbank:WP_004098740.1;Name=WP_004098740.1;gbkey=CDS;gene=degP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459214.1;locus_tag=PHA56_RS22965;product=serine endoprotease DegP;protein_id=WP_004098740.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4860346 4861860 . - . ID=gene-PHA56_RS22970;Name=dgt;gbkey=Gene;gene=dgt;gene_biotype=protein_coding;locus_tag=PHA56_RS22970;old_locus_tag=PHA56_22970 NZ_CP116214.1 Protein Homology CDS 4860346 4861860 . - 0 ID=cds-WP_014227994.1;Parent=gene-PHA56_RS22970;Dbxref=Genbank:WP_014227994.1;Name=WP_014227994.1;Ontology_term=GO:0006203,GO:0000287,GO:0008832;gbkey=CDS;gene=dgt;go_function=magnesium ion binding|0000287||IEA,dGTPase activity|0008832||IEA;go_process=dGTP catabolic process|0006203||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225209.1;locus_tag=PHA56_RS22970;product=dGTPase;protein_id=WP_014227994.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4861945 4862643 . + . ID=gene-PHA56_RS22975;Name=mtnN;gbkey=Gene;gene=mtnN;gene_biotype=protein_coding;locus_tag=PHA56_RS22975;old_locus_tag=PHA56_22975 NZ_CP116214.1 Protein Homology CDS 4861945 4862643 . + 0 ID=cds-WP_014227993.1;Parent=gene-PHA56_RS22975;Dbxref=Genbank:WP_014227993.1;Name=WP_014227993.1;Ontology_term=GO:0019509,GO:0008782,GO:0008930;gbkey=CDS;gene=mtnN;go_function=adenosylhomocysteine nucleosidase activity|0008782||IEA,methylthioadenosine nucleosidase activity|0008930||IEA;go_process=L-methionine salvage from methylthioadenosine|0019509||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459212.1;locus_tag=PHA56_RS22975;product=5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase;protein_id=WP_014227993.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4862636 4863436 . + . ID=gene-PHA56_RS22980;Name=btuF;gbkey=Gene;gene=btuF;gene_biotype=protein_coding;locus_tag=PHA56_RS22980;old_locus_tag=PHA56_22980 NZ_CP116214.1 Protein Homology CDS 4862636 4863436 . + 0 ID=cds-WP_014227992.1;Parent=gene-PHA56_RS22980;Dbxref=Genbank:WP_014227992.1;Name=WP_014227992.1;Ontology_term=GO:0005524;gbkey=CDS;gene=btuF;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225207.1;locus_tag=PHA56_RS22980;product=vitamin B12 ABC transporter substrate-binding protein BtuF;protein_id=WP_014227992.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4863620 4864243 . + . ID=gene-PHA56_RS22985;Name=PHA56_RS22985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS22985;old_locus_tag=PHA56_22985 NZ_CP116214.1 Protein Homology CDS 4863620 4864243 . + 0 ID=cds-WP_009654554.1;Parent=gene-PHA56_RS22985;Dbxref=Genbank:WP_009654554.1;Name=WP_009654554.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225206.1;locus_tag=PHA56_RS22985;product=TRIC cation channel family protein;protein_id=WP_009654554.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4864343 4864687 . - . ID=gene-PHA56_RS22990;Name=erpA;gbkey=Gene;gene=erpA;gene_biotype=protein_coding;locus_tag=PHA56_RS22990;old_locus_tag=PHA56_22990 NZ_CP116214.1 Protein Homology CDS 4864343 4864687 . - 0 ID=cds-WP_004098733.1;Parent=gene-PHA56_RS22990;Dbxref=Genbank:WP_004098733.1;Name=WP_004098733.1;Ontology_term=GO:0016226,GO:0051536;gbkey=CDS;gene=erpA;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001295564.1;locus_tag=PHA56_RS22990;product=iron-sulfur cluster insertion protein ErpA;protein_id=WP_004098733.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4864769 4866187 . - . ID=gene-PHA56_RS22995;Name=clcA;gbkey=Gene;gene=clcA;gene_biotype=protein_coding;locus_tag=PHA56_RS22995;old_locus_tag=PHA56_22995 NZ_CP116214.1 Protein Homology CDS 4864769 4866187 . - 0 ID=cds-WP_032694441.1;Parent=gene-PHA56_RS22995;Dbxref=Genbank:WP_032694441.1;Name=WP_032694441.1;Ontology_term=GO:0006821,GO:0055085,GO:0005247,GO:0005886;gbkey=CDS;gene=clcA;go_component=plasma membrane|0005886||IEA;go_function=voltage-gated chloride channel activity|0005247||IEA;go_process=chloride transport|0006821||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004872045.1;locus_tag=PHA56_RS22995;product=H(+)/Cl(-) exchange transporter ClcA;protein_id=WP_032694441.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4866368 4867648 . + . ID=gene-PHA56_RS23000;Name=hemL;gbkey=Gene;gene=hemL;gene_biotype=protein_coding;locus_tag=PHA56_RS23000;old_locus_tag=PHA56_23000 NZ_CP116214.1 Protein Homology CDS 4866368 4867648 . + 0 ID=cds-WP_025107379.1;Parent=gene-PHA56_RS23000;Dbxref=Genbank:WP_025107379.1;Name=WP_025107379.1;Ontology_term=GO:0006779,GO:0042286,GO:0005737;gbkey=CDS;gene=hemL;go_component=cytoplasm|0005737||IEA;go_function=glutamate-1-semialdehyde 2%2C1-aminomutase activity|0042286||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020233394.1;locus_tag=PHA56_RS23000;product=glutamate-1-semialdehyde 2%2C1-aminomutase;protein_id=WP_025107379.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4867854 4868783 . + . ID=gene-PHA56_RS23005;Name=PHA56_RS23005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS23005;old_locus_tag=PHA56_23005 NZ_CP116214.1 Protein Homology CDS 4867854 4868783 . + 0 ID=cds-WP_038424087.1;Parent=gene-PHA56_RS23005;Dbxref=Genbank:WP_038424087.1;Name=WP_038424087.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014837441.1;locus_tag=PHA56_RS23005;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=WP_038424087.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4868843 4870825 . - . ID=gene-PHA56_RS23010;Name=fhuB;gbkey=Gene;gene=fhuB;gene_biotype=protein_coding;locus_tag=PHA56_RS23010;old_locus_tag=PHA56_23010 NZ_CP116214.1 Protein Homology CDS 4868843 4870825 . - 0 ID=cds-WP_038424086.1;Parent=gene-PHA56_RS23010;Dbxref=Genbank:WP_038424086.1;Name=WP_038424086.1;Ontology_term=GO:0022857;gbkey=CDS;gene=fhuB;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225202.1;locus_tag=PHA56_RS23010;product=Fe(3+)-hydroxamate ABC transporter permease FhuB;protein_id=WP_038424086.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4870822 4871712 . - . ID=gene-PHA56_RS23015;Name=fhuD;gbkey=Gene;gene=fhuD;gene_biotype=protein_coding;locus_tag=PHA56_RS23015;old_locus_tag=PHA56_23015 NZ_CP116214.1 Protein Homology CDS 4870822 4871712 . - 0 ID=cds-WP_014837439.1;Parent=gene-PHA56_RS23015;Dbxref=Genbank:WP_014837439.1;Name=WP_014837439.1;gbkey=CDS;gene=fhuD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225201.1;locus_tag=PHA56_RS23015;product=Fe(3+)-hydroxamate ABC transporter substrate-binding protein FhuD;protein_id=WP_014837439.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4871712 4872509 . - . ID=gene-PHA56_RS23020;Name=fhuC;gbkey=Gene;gene=fhuC;gene_biotype=protein_coding;locus_tag=PHA56_RS23020;old_locus_tag=PHA56_23020 NZ_CP116214.1 Protein Homology CDS 4871712 4872509 . - 0 ID=cds-WP_004098728.1;Parent=gene-PHA56_RS23020;Dbxref=Genbank:WP_004098728.1;Name=WP_004098728.1;Ontology_term=GO:0005524;gbkey=CDS;gene=fhuC;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225200.1;locus_tag=PHA56_RS23020;product=Fe3+-hydroxamate ABC transporter ATP-binding protein FhuC;protein_id=WP_004098728.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4872555 4874759 . - . ID=gene-PHA56_RS23025;Name=fhuA;gbkey=Gene;gene=fhuA;gene_biotype=protein_coding;locus_tag=PHA56_RS23025;old_locus_tag=PHA56_23025 NZ_CP116214.1 Protein Homology CDS 4872555 4874759 . - 0 ID=cds-WP_038424085.1;Parent=gene-PHA56_RS23025;Dbxref=Genbank:WP_038424085.1;Name=WP_038424085.1;Ontology_term=GO:0015891,GO:0015344,GO:0038023,GO:0009279;gbkey=CDS;gene=fhuA;go_component=cell outer membrane|0009279||IEA;go_function=siderophore uptake transmembrane transporter activity|0015344||IEA,signaling receptor activity|0038023||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004204430.1;locus_tag=PHA56_RS23025;product=ferrichrome porin FhuA;protein_id=WP_038424085.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4875034 4877589 . - . ID=gene-PHA56_RS23030;Name=mrcB;gbkey=Gene;gene=mrcB;gene_biotype=protein_coding;locus_tag=PHA56_RS23030;old_locus_tag=PHA56_23030 NZ_CP116214.1 Protein Homology CDS 4875034 4877589 . - 0 ID=cds-WP_014837437.1;Parent=gene-PHA56_RS23030;Dbxref=Genbank:WP_014837437.1;Name=WP_014837437.1;Ontology_term=GO:0009252,GO:0046677,GO:0008658,GO:0008955,GO:0009274;gbkey=CDS;gene=mrcB;go_component=peptidoglycan-based cell wall|0009274||IEA;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,response to antibiotic|0046677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225197.1;locus_tag=PHA56_RS23030;product=bifunctional glycosyl transferase/transpeptidase;protein_id=WP_014837437.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4878162 4878539 . + . ID=gene-PHA56_RS23035;Name=pulS;gbkey=Gene;gene=pulS;gene_biotype=protein_coding;gene_synonym=gspS;locus_tag=PHA56_RS23035;old_locus_tag=PHA56_23035 NZ_CP116214.1 Protein Homology CDS 4878162 4878539 . + 0 ID=cds-WP_004098724.1;Parent=gene-PHA56_RS23035;Dbxref=Genbank:WP_004098724.1;Name=WP_004098724.1;gbkey=CDS;gene=pulS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004872072.1;locus_tag=PHA56_RS23035;product=GspS family T2SS pilot lipoprotein variant PulS;protein_id=WP_004098724.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4878568 4879092 . - . ID=gene-PHA56_RS23040;Name=gspB;gbkey=Gene;gene=gspB;gene_biotype=protein_coding;locus_tag=PHA56_RS23040;old_locus_tag=PHA56_23040 NZ_CP116214.1 Protein Homology CDS 4878568 4879092 . - 0 ID=cds-WP_038424084.1;Parent=gene-PHA56_RS23040;Dbxref=Genbank:WP_038424084.1;Name=WP_038424084.1;gbkey=CDS;gene=gspB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004098723.1;locus_tag=PHA56_RS23040;product=type II secretion system assembly factor GspB;protein_id=WP_038424084.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4879164 4882436 . - . ID=gene-PHA56_RS23045;Name=pulA;gbkey=Gene;gene=pulA;gene_biotype=protein_coding;locus_tag=PHA56_RS23045;old_locus_tag=PHA56_23045 NZ_CP116214.1 Protein Homology CDS 4879164 4882436 . - 0 ID=cds-WP_038424083.1;Parent=gene-PHA56_RS23045;Dbxref=Genbank:WP_038424083.1;Name=WP_038424083.1;Ontology_term=GO:0005983,GO:0051678,GO:0051060;gbkey=CDS;gene=pulA;go_function=pullulanase activity|0051060||IEA;go_process=starch catabolic process|0005983||IEA,pullulan catabolic process|0051678||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016160315.1;locus_tag=PHA56_RS23045;product=pullulanase-type alpha-1%2C6-glucosidase;protein_id=WP_038424083.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4882789 4883625 . + . ID=gene-PHA56_RS23050;Name=gspC;gbkey=Gene;gene=gspC;gene_biotype=protein_coding;locus_tag=PHA56_RS23050;old_locus_tag=PHA56_23050 NZ_CP116214.1 Protein Homology CDS 4882789 4883625 . + 0 ID=cds-WP_076752491.1;Parent=gene-PHA56_RS23050;Dbxref=Genbank:WP_076752491.1;Name=WP_076752491.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspC;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017901152.1;locus_tag=PHA56_RS23050;product=type II secretion system protein GspC;protein_id=WP_076752491.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4883662 4885608 . + . ID=gene-PHA56_RS23055;Name=pulD;gbkey=Gene;gene=pulD;gene_biotype=protein_coding;gene_synonym=gspD;locus_tag=PHA56_RS23055;old_locus_tag=PHA56_23055 NZ_CP116214.1 Protein Homology CDS 4883662 4885608 . + 0 ID=cds-WP_029946937.1;Parent=gene-PHA56_RS23055;Dbxref=Genbank:WP_029946937.1;Name=WP_029946937.1;gbkey=CDS;gene=pulD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004872081.1;locus_tag=PHA56_RS23055;product=GspD family T2SS secretin variant PulD;protein_id=WP_029946937.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4885605 4887098 . + . ID=gene-PHA56_RS23060;Name=gspE;gbkey=Gene;gene=gspE;gene_biotype=protein_coding;locus_tag=PHA56_RS23060;old_locus_tag=PHA56_23060 NZ_CP116214.1 Protein Homology CDS 4885605 4887098 . + 0 ID=cds-WP_025107369.1;Parent=gene-PHA56_RS23060;Dbxref=Genbank:WP_025107369.1;Name=WP_025107369.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspE;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014837431.1;locus_tag=PHA56_RS23060;product=type II secretion system ATPase GspE;protein_id=WP_025107369.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4887100 4888305 . + . ID=gene-PHA56_RS23065;Name=gspF;gbkey=Gene;gene=gspF;gene_biotype=protein_coding;locus_tag=PHA56_RS23065;old_locus_tag=PHA56_23065 NZ_CP116214.1 Protein Homology CDS 4887100 4888305 . + 0 ID=cds-WP_038424081.1;Parent=gene-PHA56_RS23065;Dbxref=Genbank:WP_038424081.1;Name=WP_038424081.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspF;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225185.1;locus_tag=PHA56_RS23065;product=type II secretion system inner membrane protein GspF;protein_id=WP_038424081.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4888326 4888748 . + . ID=gene-PHA56_RS23070;Name=gspG;gbkey=Gene;gene=gspG;gene_biotype=protein_coding;locus_tag=PHA56_RS23070;old_locus_tag=PHA56_23070 NZ_CP116214.1 Protein Homology CDS 4888326 4888748 . + 0 ID=cds-WP_004098709.1;Parent=gene-PHA56_RS23070;Dbxref=Genbank:WP_004098709.1;Name=WP_004098709.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspG;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225184.1;locus_tag=PHA56_RS23070;product=type II secretion system major pseudopilin GspG;protein_id=WP_004098709.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4888748 4889260 . + . ID=gene-PHA56_RS23075;Name=gspH;gbkey=Gene;gene=gspH;gene_biotype=protein_coding;locus_tag=PHA56_RS23075;old_locus_tag=PHA56_23075 NZ_CP116214.1 Protein Homology CDS 4888748 4889260 . + 0 ID=cds-WP_038424080.1;Parent=gene-PHA56_RS23075;Dbxref=Genbank:WP_038424080.1;Name=WP_038424080.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspH;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009654561.1;locus_tag=PHA56_RS23075;product=type II secretion system minor pseudopilin GspH;protein_id=WP_038424080.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4889257 4889622 . + . ID=gene-PHA56_RS23080;Name=gspI;gbkey=Gene;gene=gspI;gene_biotype=protein_coding;locus_tag=PHA56_RS23080;old_locus_tag=PHA56_23080 NZ_CP116214.1 Protein Homology CDS 4889257 4889622 . + 0 ID=cds-WP_009654631.1;Parent=gene-PHA56_RS23080;Dbxref=Genbank:WP_009654631.1;Name=WP_009654631.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspI;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225182.1;locus_tag=PHA56_RS23080;product=type II secretion system minor pseudopilin GspI;protein_id=WP_009654631.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4889619 4890215 . + . ID=gene-PHA56_RS23085;Name=gspJ;gbkey=Gene;gene=gspJ;gene_biotype=protein_coding;locus_tag=PHA56_RS23085;old_locus_tag=PHA56_23085 NZ_CP116214.1 Protein Homology CDS 4889619 4890215 . + 0 ID=cds-WP_014837428.1;Parent=gene-PHA56_RS23085;Dbxref=Genbank:WP_014837428.1;Name=WP_014837428.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspJ;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004151940.1;locus_tag=PHA56_RS23085;product=type II secretion system minor pseudopilin GspJ;protein_id=WP_014837428.1;transl_table=11 NZ_CP116214.1 RefSeq pseudogene 4890212 4890349 . + . ID=gene-PHA56_RS23090;Name=PHA56_RS23090;end_range=4890349,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS23090;old_locus_tag=PHA56_23090;partial=true;pseudo=true NZ_CP116214.1 Protein Homology CDS 4890212 4890349 . + 0 ID=cds-PHA56_RS23090;Parent=gene-PHA56_RS23090;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=4890349,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004894165.1;locus_tag=PHA56_RS23090;partial=true;product=general secretion pathway protein GspK;pseudo=true;transl_table=11 NZ_CP116214.1 RefSeq gene 4890599 4891237 . - . ID=gene-PHA56_RS23095;Name=PHA56_RS23095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS23095;old_locus_tag=PHA56_23095 NZ_CP116214.1 GeneMarkS-2+ CDS 4890599 4891237 . - 0 ID=cds-WP_032751450.1;Parent=gene-PHA56_RS23095;Dbxref=Genbank:WP_032751450.1;Name=WP_032751450.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PHA56_RS23095;product=transcriptional regulator;protein_id=WP_032751450.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4891409 4891633 . + . ID=gene-PHA56_RS23100;Name=PHA56_RS23100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS23100;old_locus_tag=PHA56_23100 NZ_CP116214.1 Protein Homology CDS 4891409 4891633 . + 0 ID=cds-WP_032751971.1;Parent=gene-PHA56_RS23100;Dbxref=Genbank:WP_032751971.1;Name=WP_032751971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001568891.1;locus_tag=PHA56_RS23100;product=helix-turn-helix domain-containing protein;protein_id=WP_032751971.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4891636 4893714 . + . ID=gene-PHA56_RS23105;Name=PHA56_RS23105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS23105;old_locus_tag=PHA56_23105 NZ_CP116214.1 Protein Homology CDS 4891636 4893714 . + 0 ID=cds-WP_032751449.1;Parent=gene-PHA56_RS23105;Dbxref=Genbank:WP_032751449.1;Name=WP_032751449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019704481.1;locus_tag=PHA56_RS23105;product=Mu transposase C-terminal domain-containing protein;protein_id=WP_032751449.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4893750 4894697 . + . ID=gene-PHA56_RS23110;Name=PHA56_RS23110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS23110;old_locus_tag=PHA56_23110 NZ_CP116214.1 Protein Homology CDS 4893750 4894697 . + 0 ID=cds-WP_032751448.1;Parent=gene-PHA56_RS23110;Dbxref=Genbank:WP_032751448.1;Name=WP_032751448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004114537.1;locus_tag=PHA56_RS23110;product=AAA family ATPase;protein_id=WP_032751448.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4894703 4895038 . + . ID=gene-PHA56_RS23115;Name=PHA56_RS23115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS23115;old_locus_tag=PHA56_23115 NZ_CP116214.1 GeneMarkS-2+ CDS 4894703 4895038 . + 0 ID=cds-WP_032751446.1;Parent=gene-PHA56_RS23115;Dbxref=Genbank:WP_032751446.1;Name=WP_032751446.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PHA56_RS23115;product=hypothetical protein;protein_id=WP_032751446.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4895016 4895255 . + . ID=gene-PHA56_RS23120;Name=PHA56_RS23120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS23120;old_locus_tag=PHA56_23120 NZ_CP116214.1 Protein Homology CDS 4895016 4895255 . + 0 ID=cds-WP_032751445.1;Parent=gene-PHA56_RS23120;Dbxref=Genbank:WP_032751445.1;Name=WP_032751445.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016807480.1;locus_tag=PHA56_RS23120;product=hypothetical protein;protein_id=WP_032751445.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4895258 4895545 . + . ID=gene-PHA56_RS23125;Name=PHA56_RS23125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS23125;old_locus_tag=PHA56_23125 NZ_CP116214.1 Protein Homology CDS 4895258 4895545 . + 0 ID=cds-WP_004114541.1;Parent=gene-PHA56_RS23125;Dbxref=Genbank:WP_004114541.1;Name=WP_004114541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004114541.1;locus_tag=PHA56_RS23125;product=HTH domain-containing protein;protein_id=WP_004114541.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4895561 4896178 . + . ID=gene-PHA56_RS23130;Name=PHA56_RS23130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS23130;old_locus_tag=PHA56_23130 NZ_CP116214.1 Protein Homology CDS 4895561 4896178 . + 0 ID=cds-WP_032751444.1;Parent=gene-PHA56_RS23130;Dbxref=Genbank:WP_032751444.1;Name=WP_032751444.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016807477.1;locus_tag=PHA56_RS23130;product=DUF3164 family protein;protein_id=WP_032751444.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4896259 4896753 . + . ID=gene-PHA56_RS23135;Name=PHA56_RS23135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS23135;old_locus_tag=PHA56_23135 NZ_CP116214.1 Protein Homology CDS 4896259 4896753 . + 0 ID=cds-WP_032751970.1;Parent=gene-PHA56_RS23135;Dbxref=Genbank:WP_032751970.1;Name=WP_032751970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004114544.1;locus_tag=PHA56_RS23135;product=hypothetical protein;protein_id=WP_032751970.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4896746 4897045 . + . ID=gene-PHA56_RS23140;Name=PHA56_RS23140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS23140;old_locus_tag=PHA56_23140 NZ_CP116214.1 Protein Homology CDS 4896746 4897045 . + 0 ID=cds-WP_032751443.1;Parent=gene-PHA56_RS23140;Dbxref=Genbank:WP_032751443.1;Name=WP_032751443.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000414650.1;locus_tag=PHA56_RS23140;product=hypothetical protein;protein_id=WP_032751443.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4897042 4897266 . - . ID=gene-PHA56_RS23145;Name=PHA56_RS23145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS23145;old_locus_tag=PHA56_23145 NZ_CP116214.1 Protein Homology CDS 4897042 4897266 . - 0 ID=cds-WP_032751442.1;Parent=gene-PHA56_RS23145;Dbxref=Genbank:WP_032751442.1;Name=WP_032751442.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001280089.1;locus_tag=PHA56_RS23145;product=hypothetical protein;protein_id=WP_032751442.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4897336 4897890 . + . ID=gene-PHA56_RS23150;Name=PHA56_RS23150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS23150;old_locus_tag=PHA56_23150 NZ_CP116214.1 Protein Homology CDS 4897336 4897890 . + 0 ID=cds-WP_032751440.1;Parent=gene-PHA56_RS23150;Dbxref=Genbank:WP_032751440.1;Name=WP_032751440.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004114550.1;locus_tag=PHA56_RS23150;product=regulatory protein GemA;protein_id=WP_032751440.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4897887 4898282 . + . ID=gene-PHA56_RS23155;Name=PHA56_RS23155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS23155;old_locus_tag=PHA56_23155 NZ_CP116214.1 Protein Homology CDS 4897887 4898282 . + 0 ID=cds-WP_032751439.1;Parent=gene-PHA56_RS23155;Dbxref=Genbank:WP_032751439.1;Name=WP_032751439.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019704476.1;locus_tag=PHA56_RS23155;product=Mor transcription activator family protein;protein_id=WP_032751439.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4898286 4898798 . + . ID=gene-PHA56_RS23160;Name=PHA56_RS23160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS23160;old_locus_tag=PHA56_23160 NZ_CP116214.1 Protein Homology CDS 4898286 4898798 . + 0 ID=cds-WP_032751438.1;Parent=gene-PHA56_RS23160;Dbxref=Genbank:WP_032751438.1;Name=WP_032751438.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019704475.1;locus_tag=PHA56_RS23160;product=hypothetical protein;protein_id=WP_032751438.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4898893 4899471 . + . ID=gene-PHA56_RS23165;Name=PHA56_RS23165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS23165;old_locus_tag=PHA56_23165 NZ_CP116214.1 Protein Homology CDS 4898893 4899471 . + 0 ID=cds-WP_032751436.1;Parent=gene-PHA56_RS23165;Dbxref=Genbank:WP_032751436.1;Name=WP_032751436.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016807471.1;locus_tag=PHA56_RS23165;product=N-acetylmuramidase;protein_id=WP_032751436.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4899474 4899692 . + . ID=gene-PHA56_RS23170;Name=PHA56_RS23170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS23170;old_locus_tag=PHA56_23170 NZ_CP116214.1 Protein Homology CDS 4899474 4899692 . + 0 ID=cds-WP_071995746.1;Parent=gene-PHA56_RS23170;Dbxref=Genbank:WP_071995746.1;Name=WP_071995746.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019704473.1;locus_tag=PHA56_RS23170;product=hypothetical protein;protein_id=WP_071995746.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4899685 4900092 . + . ID=gene-PHA56_RS23175;Name=PHA56_RS23175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS23175;old_locus_tag=PHA56_23175 NZ_CP116214.1 Protein Homology CDS 4899685 4900092 . + 0 ID=cds-WP_032751969.1;Parent=gene-PHA56_RS23175;Dbxref=Genbank:WP_032751969.1;Name=WP_032751969.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016807469.1;locus_tag=PHA56_RS23175;product=hypothetical protein;protein_id=WP_032751969.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4900080 4900691 . + . ID=gene-PHA56_RS23180;Name=PHA56_RS23180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS23180;old_locus_tag=PHA56_23180 NZ_CP116214.1 Protein Homology CDS 4900080 4900691 . + 0 ID=cds-WP_032751434.1;Parent=gene-PHA56_RS23180;Dbxref=Genbank:WP_032751434.1;Name=WP_032751434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016807468.1;locus_tag=PHA56_RS23180;product=hypothetical protein;protein_id=WP_032751434.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4900688 4900918 . + . ID=gene-PHA56_RS23185;Name=PHA56_RS23185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS23185;old_locus_tag=PHA56_23185 NZ_CP116214.1 Protein Homology CDS 4900688 4900918 . + 0 ID=cds-WP_032751432.1;Parent=gene-PHA56_RS23185;Dbxref=Genbank:WP_032751432.1;Name=WP_032751432.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004114564.1;locus_tag=PHA56_RS23185;product=TraR/DksA family transcriptional regulator;protein_id=WP_032751432.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4900899 4901201 . + . ID=gene-PHA56_RS23190;Name=PHA56_RS23190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS23190;old_locus_tag=PHA56_23190 NZ_CP116214.1 Protein Homology CDS 4900899 4901201 . + 0 ID=cds-WP_016807466.1;Parent=gene-PHA56_RS23190;Dbxref=Genbank:WP_016807466.1;Name=WP_016807466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016807466.1;locus_tag=PHA56_RS23190;product=DUF2730 domain-containing protein;protein_id=WP_016807466.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4901211 4901498 . + . ID=gene-PHA56_RS23195;Name=PHA56_RS23195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS23195;old_locus_tag=PHA56_23195 NZ_CP116214.1 Protein Homology CDS 4901211 4901498 . + 0 ID=cds-WP_004114568.1;Parent=gene-PHA56_RS23195;Dbxref=Genbank:WP_004114568.1;Name=WP_004114568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002442919.1;locus_tag=PHA56_RS23195;product=hypothetical protein;protein_id=WP_004114568.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4901498 4901785 . + . ID=gene-PHA56_RS23200;Name=PHA56_RS23200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS23200;old_locus_tag=PHA56_23200 NZ_CP116214.1 Protein Homology CDS 4901498 4901785 . + 0 ID=cds-WP_032751429.1;Parent=gene-PHA56_RS23200;Dbxref=Genbank:WP_032751429.1;Name=WP_032751429.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019704467.1;locus_tag=PHA56_RS23200;product=hypothetical protein;protein_id=WP_032751429.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4901775 4902350 . + . ID=gene-PHA56_RS23205;Name=PHA56_RS23205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS23205;old_locus_tag=PHA56_23205 NZ_CP116214.1 Protein Homology CDS 4901775 4902350 . + 0 ID=cds-WP_032751427.1;Parent=gene-PHA56_RS23205;Dbxref=Genbank:WP_032751427.1;Name=WP_032751427.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019704466.1;locus_tag=PHA56_RS23205;product=DUF3486 family protein;protein_id=WP_032751427.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4902347 4903933 . + . ID=gene-PHA56_RS23210;Name=PHA56_RS23210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS23210;old_locus_tag=PHA56_23210 NZ_CP116214.1 Protein Homology CDS 4902347 4903933 . + 0 ID=cds-WP_032751425.1;Parent=gene-PHA56_RS23210;Dbxref=Genbank:WP_032751425.1;Name=WP_032751425.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002442926.1;locus_tag=PHA56_RS23210;product=terminase family protein;protein_id=WP_032751425.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4903933 4905504 . + . ID=gene-PHA56_RS23215;Name=PHA56_RS23215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS23215;old_locus_tag=PHA56_23215 NZ_CP116214.1 Protein Homology CDS 4903933 4905504 . + 0 ID=cds-WP_032751423.1;Parent=gene-PHA56_RS23215;Dbxref=Genbank:WP_032751423.1;Name=WP_032751423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016807462.1;locus_tag=PHA56_RS23215;product=DUF935 domain-containing protein;protein_id=WP_032751423.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4905497 4906339 . + . ID=gene-PHA56_RS23220;Name=PHA56_RS23220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS23220;old_locus_tag=PHA56_23220 NZ_CP116214.1 Protein Homology CDS 4905497 4906339 . + 0 ID=cds-WP_032751422.1;Parent=gene-PHA56_RS23220;Dbxref=Genbank:WP_032751422.1;Name=WP_032751422.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004114577.1;locus_tag=PHA56_RS23220;product=phage minor head protein;protein_id=WP_032751422.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4906573 4907544 . + . ID=gene-PHA56_RS23225;Name=PHA56_RS23225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS23225;old_locus_tag=PHA56_23225 NZ_CP116214.1 Protein Homology CDS 4906573 4907544 . + 0 ID=cds-WP_032751420.1;Parent=gene-PHA56_RS23225;Dbxref=Genbank:WP_032751420.1;Name=WP_032751420.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019704462.1;locus_tag=PHA56_RS23225;product=phage protease;protein_id=WP_032751420.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4907547 4908449 . + . ID=gene-PHA56_RS23230;Name=PHA56_RS23230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS23230;old_locus_tag=PHA56_23230 NZ_CP116214.1 Protein Homology CDS 4907547 4908449 . + 0 ID=cds-WP_076752593.1;Parent=gene-PHA56_RS23230;Dbxref=Genbank:WP_076752593.1;Name=WP_076752593.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000501477.1;locus_tag=PHA56_RS23230;product=Mu-like prophage major head subunit gpT family protein;protein_id=WP_076752593.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4908523 4909029 . + . ID=gene-PHA56_RS23235;Name=PHA56_RS23235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS23235;old_locus_tag=PHA56_23235 NZ_CP116214.1 Protein Homology CDS 4908523 4909029 . + 0 ID=cds-WP_032751416.1;Parent=gene-PHA56_RS23235;Dbxref=Genbank:WP_032751416.1;Name=WP_032751416.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004114583.1;locus_tag=PHA56_RS23235;product=hypothetical protein;protein_id=WP_032751416.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4909029 4909469 . + . ID=gene-PHA56_RS23240;Name=PHA56_RS23240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS23240;old_locus_tag=PHA56_23240 NZ_CP116214.1 Protein Homology CDS 4909029 4909469 . + 0 ID=cds-WP_032751414.1;Parent=gene-PHA56_RS23240;Dbxref=Genbank:WP_032751414.1;Name=WP_032751414.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016807456.1;locus_tag=PHA56_RS23240;product=DUF1320 domain-containing protein;protein_id=WP_032751414.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4909469 4910011 . + . ID=gene-PHA56_RS23245;Name=PHA56_RS23245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS23245;old_locus_tag=PHA56_23245 NZ_CP116214.1 Protein Homology CDS 4909469 4910011 . + 0 ID=cds-WP_032751412.1;Parent=gene-PHA56_RS23245;Dbxref=Genbank:WP_032751412.1;Name=WP_032751412.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004114586.1;locus_tag=PHA56_RS23245;product=phage virion morphogenesis protein;protein_id=WP_032751412.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4910008 4910619 . + . ID=gene-PHA56_RS23250;Name=PHA56_RS23250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS23250;old_locus_tag=PHA56_23250 NZ_CP116214.1 Protein Homology CDS 4910008 4910619 . + 0 ID=cds-WP_032751410.1;Parent=gene-PHA56_RS23250;Dbxref=Genbank:WP_032751410.1;Name=WP_032751410.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019704458.1;locus_tag=PHA56_RS23250;product=hypothetical protein;protein_id=WP_032751410.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4910622 4910831 . + . ID=gene-PHA56_RS23255;Name=PHA56_RS23255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS23255;old_locus_tag=PHA56_23255 NZ_CP116214.1 Protein Homology CDS 4910622 4910831 . + 0 ID=cds-WP_032751409.1;Parent=gene-PHA56_RS23255;Dbxref=Genbank:WP_032751409.1;Name=WP_032751409.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019704457.1;locus_tag=PHA56_RS23255;product=DUF2635 domain-containing protein;protein_id=WP_032751409.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4910833 4912314 . + . ID=gene-PHA56_RS23260;Name=PHA56_RS23260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS23260;old_locus_tag=PHA56_23260 NZ_CP116214.1 Protein Homology CDS 4910833 4912314 . + 0 ID=cds-WP_032751407.1;Parent=gene-PHA56_RS23260;Dbxref=Genbank:WP_032751407.1;Name=WP_032751407.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004114590.1;locus_tag=PHA56_RS23260;product=phage tail sheath subtilisin-like domain-containing protein;protein_id=WP_032751407.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4912324 4912677 . + . ID=gene-PHA56_RS23265;Name=PHA56_RS23265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS23265;old_locus_tag=PHA56_23265 NZ_CP116214.1 Protein Homology CDS 4912324 4912677 . + 0 ID=cds-WP_032751406.1;Parent=gene-PHA56_RS23265;Dbxref=Genbank:WP_032751406.1;Name=WP_032751406.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002442949.1;locus_tag=PHA56_RS23265;product=phage tail tube protein;protein_id=WP_032751406.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4912681 4913064 . + . ID=gene-PHA56_RS23270;Name=PHA56_RS23270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS23270;old_locus_tag=PHA56_23270 NZ_CP116214.1 Protein Homology CDS 4912681 4913064 . + 0 ID=cds-WP_032751403.1;Parent=gene-PHA56_RS23270;Dbxref=Genbank:WP_032751403.1;Name=WP_032751403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016807450.1;locus_tag=PHA56_RS23270;product=phage tail assembly protein;protein_id=WP_032751403.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4913163 4915016 . + . ID=gene-PHA56_RS23275;Name=PHA56_RS23275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS23275;old_locus_tag=PHA56_23275 NZ_CP116214.1 Protein Homology CDS 4913163 4915016 . + 0 ID=cds-WP_032751402.1;Parent=gene-PHA56_RS23275;Dbxref=Genbank:WP_032751402.1;Name=WP_032751402.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000190547.1;locus_tag=PHA56_RS23275;product=phage tail tape measure protein;protein_id=WP_032751402.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4915016 4916275 . + . ID=gene-PHA56_RS23280;Name=PHA56_RS23280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS23280;old_locus_tag=PHA56_23280 NZ_CP116214.1 Protein Homology CDS 4915016 4916275 . + 0 ID=cds-WP_032751401.1;Parent=gene-PHA56_RS23280;Dbxref=Genbank:WP_032751401.1;Name=WP_032751401.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002442954.1;locus_tag=PHA56_RS23280;product=DNA circularization N-terminal domain-containing protein;protein_id=WP_032751401.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4916268 4917359 . + . ID=gene-PHA56_RS23285;Name=PHA56_RS23285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS23285;old_locus_tag=PHA56_23285 NZ_CP116214.1 Protein Homology CDS 4916268 4917359 . + 0 ID=cds-WP_032751400.1;Parent=gene-PHA56_RS23285;Dbxref=Genbank:WP_032751400.1;Name=WP_032751400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016807447.1;locus_tag=PHA56_RS23285;product=contractile injection system protein%2C VgrG/Pvc8 family;protein_id=WP_032751400.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4917350 4917889 . + . ID=gene-PHA56_RS23290;Name=PHA56_RS23290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS23290;old_locus_tag=PHA56_23290 NZ_CP116214.1 Protein Homology CDS 4917350 4917889 . + 0 ID=cds-WP_032751398.1;Parent=gene-PHA56_RS23290;Dbxref=Genbank:WP_032751398.1;Name=WP_032751398.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019704450.1;locus_tag=PHA56_RS23290;product=phage baseplate assembly protein V;protein_id=WP_032751398.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4917886 4918338 . + . ID=gene-PHA56_RS23295;Name=PHA56_RS23295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS23295;old_locus_tag=PHA56_23295 NZ_CP116214.1 Protein Homology CDS 4917886 4918338 . + 0 ID=cds-WP_016807445.1;Parent=gene-PHA56_RS23295;Dbxref=Genbank:WP_016807445.1;Name=WP_016807445.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019704449.1;locus_tag=PHA56_RS23295;product=phage GP46 family protein;protein_id=WP_016807445.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4918325 4919401 . + . ID=gene-PHA56_RS23300;Name=PHA56_RS23300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS23300;old_locus_tag=PHA56_23300 NZ_CP116214.1 Protein Homology CDS 4918325 4919401 . + 0 ID=cds-WP_032751397.1;Parent=gene-PHA56_RS23300;Dbxref=Genbank:WP_032751397.1;Name=WP_032751397.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019704448.1;locus_tag=PHA56_RS23300;product=baseplate J/gp47 family protein;protein_id=WP_032751397.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4919386 4919970 . + . ID=gene-PHA56_RS23305;Name=PHA56_RS23305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS23305;old_locus_tag=PHA56_23305 NZ_CP116214.1 Protein Homology CDS 4919386 4919970 . + 0 ID=cds-WP_016807443.1;Parent=gene-PHA56_RS23305;Dbxref=Genbank:WP_016807443.1;Name=WP_016807443.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004114605.1;locus_tag=PHA56_RS23305;product=YmfQ family protein;protein_id=WP_016807443.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4919973 4920785 . + . ID=gene-PHA56_RS23310;Name=PHA56_RS23310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS23310;old_locus_tag=PHA56_23310 NZ_CP116214.1 Protein Homology CDS 4919973 4920785 . + 0 ID=cds-WP_032751396.1;Parent=gene-PHA56_RS23310;Dbxref=Genbank:WP_032751396.1;Name=WP_032751396.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016807442.1;locus_tag=PHA56_RS23310;product=phage tail protein;protein_id=WP_032751396.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4920785 4921660 . + . ID=gene-PHA56_RS23315;Name=PHA56_RS23315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS23315;old_locus_tag=PHA56_23315 NZ_CP116214.1 Protein Homology CDS 4920785 4921660 . + 0 ID=cds-WP_032751395.1;Parent=gene-PHA56_RS23315;Dbxref=Genbank:WP_032751395.1;Name=WP_032751395.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004114607.1;locus_tag=PHA56_RS23315;product=tail fiber assembly protein;protein_id=WP_032751395.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4921670 4923628 . + . ID=gene-PHA56_RS23320;Name=PHA56_RS23320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS23320;old_locus_tag=PHA56_23320 NZ_CP116214.1 Protein Homology CDS 4921670 4923628 . + 0 ID=cds-WP_050597590.1;Parent=gene-PHA56_RS23320;Dbxref=Genbank:WP_050597590.1;Name=WP_050597590.1;Ontology_term=GO:0005975,GO:0004650;gbkey=CDS;go_function=polygalacturonase activity|0004650||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004114608.1;locus_tag=PHA56_RS23320;product=glycosyl hydrolase family 28 protein;protein_id=WP_050597590.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4923636 4923884 . + . ID=gene-PHA56_RS23325;Name=PHA56_RS23325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS23325;old_locus_tag=PHA56_23325 NZ_CP116214.1 GeneMarkS-2+ CDS 4923636 4923884 . + 0 ID=cds-WP_032751394.1;Parent=gene-PHA56_RS23325;Dbxref=Genbank:WP_032751394.1;Name=WP_032751394.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PHA56_RS23325;product=hypothetical protein;protein_id=WP_032751394.1;transl_table=11 NZ_CP116214.1 RefSeq pseudogene 4924050 4924910 . + . ID=gene-PHA56_RS23330;Name=gspK;gbkey=Gene;gene=gspK;gene_biotype=pseudogene;locus_tag=PHA56_RS23330;old_locus_tag=PHA56_23330;partial=true;pseudo=true;start_range=.,4924050 NZ_CP116214.1 Protein Homology CDS 4924050 4924910 . + 0 ID=cds-PHA56_RS23330;Parent=gene-PHA56_RS23330;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0009306,GO:0016020;gbkey=CDS;gene=gspK;go_component=membrane|0016020||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014227974.1;locus_tag=PHA56_RS23330;partial=true;product=type II secretion system minor pseudopilin GspK;pseudo=true;start_range=.,4924050;transl_table=11 NZ_CP116214.1 RefSeq gene 4924903 4926096 . + . ID=gene-PHA56_RS23335;Name=gspL;gbkey=Gene;gene=gspL;gene_biotype=protein_coding;locus_tag=PHA56_RS23335;old_locus_tag=PHA56_23335 NZ_CP116214.1 Protein Homology CDS 4924903 4926096 . + 0 ID=cds-WP_032720564.1;Parent=gene-PHA56_RS23335;Dbxref=Genbank:WP_032720564.1;Name=WP_032720564.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspL;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004098701.1;locus_tag=PHA56_RS23335;product=type II secretion system protein GspL;protein_id=WP_032720564.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4926089 4926574 . + . ID=gene-PHA56_RS23340;Name=PHA56_RS23340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS23340;old_locus_tag=PHA56_23340 NZ_CP116214.1 Protein Homology CDS 4926089 4926574 . + 0 ID=cds-WP_038424078.1;Parent=gene-PHA56_RS23340;Dbxref=Genbank:WP_038424078.1;Name=WP_038424078.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014227972.1;locus_tag=PHA56_RS23340;product=type II secretion system protein M;protein_id=WP_038424078.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4926564 4927322 . + . ID=gene-PHA56_RS23345;Name=PHA56_RS23345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS23345;old_locus_tag=PHA56_23345 NZ_CP116214.1 Protein Homology CDS 4926564 4927322 . + 0 ID=cds-WP_038424077.1;Parent=gene-PHA56_RS23345;Dbxref=Genbank:WP_038424077.1;Name=WP_038424077.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004110653.1;locus_tag=PHA56_RS23345;product=type II secretion system protein N;protein_id=WP_038424077.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4927325 4928122 . + . ID=gene-PHA56_RS23350;Name=PHA56_RS23350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS23350;old_locus_tag=PHA56_23350 NZ_CP116214.1 Protein Homology CDS 4927325 4928122 . + 0 ID=cds-WP_032694399.1;Parent=gene-PHA56_RS23350;Dbxref=Genbank:WP_032694399.1;Name=WP_032694399.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017144963.1;locus_tag=PHA56_RS23350;product=A24 family peptidase;protein_id=WP_032694399.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4928220 4930649 . - . ID=gene-PHA56_RS23355;Name=hrpB;gbkey=Gene;gene=hrpB;gene_biotype=protein_coding;locus_tag=PHA56_RS23355;old_locus_tag=PHA56_23355 NZ_CP116214.1 Protein Homology CDS 4928220 4930649 . - 0 ID=cds-WP_038424076.1;Parent=gene-PHA56_RS23355;Dbxref=Genbank:WP_038424076.1;Name=WP_038424076.1;Ontology_term=GO:0004386,GO:0005524;gbkey=CDS;gene=hrpB;go_function=helicase activity|0004386||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225175.1;locus_tag=PHA56_RS23355;product=ATP-dependent helicase HrpB;protein_id=WP_038424076.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4930722 4931258 . + . ID=gene-PHA56_RS23360;Name=thpR;gbkey=Gene;gene=thpR;gene_biotype=protein_coding;locus_tag=PHA56_RS23360;old_locus_tag=PHA56_23360 NZ_CP116214.1 Protein Homology CDS 4930722 4931258 . + 0 ID=cds-WP_014227968.1;Parent=gene-PHA56_RS23360;Dbxref=Genbank:WP_014227968.1;Name=WP_014227968.1;Ontology_term=GO:0004113,GO:0008664;gbkey=CDS;gene=thpR;go_function=2'%2C3'-cyclic-nucleotide 3'-phosphodiesterase activity|0004113||IEA,2'-5'-RNA ligase activity|0008664||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225174.1;locus_tag=PHA56_RS23360;product=RNA 2'%2C3'-cyclic phosphodiesterase;protein_id=WP_014227968.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4931258 4931974 . + . ID=gene-PHA56_RS23365;Name=sfsA;gbkey=Gene;gene=sfsA;gene_biotype=protein_coding;locus_tag=PHA56_RS23365;old_locus_tag=PHA56_23365 NZ_CP116214.1 Protein Homology CDS 4931258 4931974 . + 0 ID=cds-WP_014227967.1;Parent=gene-PHA56_RS23365;Dbxref=Genbank:WP_014227967.1;Name=WP_014227967.1;Ontology_term=GO:0000023,GO:0003677;gbkey=CDS;gene=sfsA;go_function=DNA binding|0003677||IEA;go_process=maltose metabolic process|0000023||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225173.1;locus_tag=PHA56_RS23365;product=DNA/RNA nuclease SfsA;protein_id=WP_014227967.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4932139 4932594 . + . ID=gene-PHA56_RS23370;Name=dksA;gbkey=Gene;gene=dksA;gene_biotype=protein_coding;locus_tag=PHA56_RS23370;old_locus_tag=PHA56_23370 NZ_CP116214.1 Protein Homology CDS 4932139 4932594 . + 0 ID=cds-WP_004098689.1;Parent=gene-PHA56_RS23370;Dbxref=Genbank:WP_004098689.1;Name=WP_004098689.1;gbkey=CDS;gene=dksA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209354.1;locus_tag=PHA56_RS23370;product=RNA polymerase-binding protein DksA;protein_id=WP_004098689.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4932655 4933536 . + . ID=gene-PHA56_RS23375;Name=gluQRS;gbkey=Gene;gene=gluQRS;gene_biotype=protein_coding;locus_tag=PHA56_RS23375;old_locus_tag=PHA56_23375 NZ_CP116214.1 Protein Homology CDS 4932655 4933536 . + 0 ID=cds-WP_014227966.1;Parent=gene-PHA56_RS23375;Dbxref=Genbank:WP_014227966.1;Name=WP_014227966.1;Ontology_term=GO:0006400,GO:0043039,GO:0000166,GO:0004812,GO:0005524;gbkey=CDS;gene=gluQRS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,ATP binding|0005524||IEA;go_process=tRNA modification|0006400||IEA,tRNA aminoacylation|0043039||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225171.1;locus_tag=PHA56_RS23375;product=tRNA glutamyl-Q(34) synthetase GluQRS;protein_id=WP_014227966.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4933588 4934985 . + . ID=gene-PHA56_RS23380;Name=pcnB;gbkey=Gene;gene=pcnB;gene_biotype=protein_coding;locus_tag=PHA56_RS23380;old_locus_tag=PHA56_23380 NZ_CP116214.1 Protein Homology CDS 4933588 4934985 . + 0 ID=cds-WP_071881716.1;Parent=gene-PHA56_RS23380;Dbxref=Genbank:WP_071881716.1;Name=WP_071881716.1;Ontology_term=GO:0006378,GO:0003723,GO:0004652;gbkey=CDS;gene=pcnB;go_function=RNA binding|0003723||IEA,polynucleotide adenylyltransferase activity|0004652||IEA;go_process=mRNA polyadenylation|0006378||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414685.4;locus_tag=PHA56_RS23380;product=polynucleotide adenylyltransferase PcnB;protein_id=WP_071881716.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4934982 4935461 . + . ID=gene-PHA56_RS23385;Name=folK;gbkey=Gene;gene=folK;gene_biotype=protein_coding;locus_tag=PHA56_RS23385;old_locus_tag=PHA56_23385 NZ_CP116214.1 Protein Homology CDS 4934982 4935461 . + 0 ID=cds-WP_014227964.1;Parent=gene-PHA56_RS23385;Dbxref=Genbank:WP_014227964.1;Name=WP_014227964.1;gbkey=CDS;gene=folK;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225169.1;locus_tag=PHA56_RS23385;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase;protein_id=WP_014227964.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4935581 4936372 . + . ID=gene-PHA56_RS23390;Name=panB;gbkey=Gene;gene=panB;gene_biotype=protein_coding;locus_tag=PHA56_RS23390;old_locus_tag=PHA56_23390 NZ_CP116214.1 Protein Homology CDS 4935581 4936372 . + 0 ID=cds-WP_014227963.1;Parent=gene-PHA56_RS23390;Dbxref=Genbank:WP_014227963.1;Name=WP_014227963.1;Ontology_term=GO:0015940,GO:0003864;gbkey=CDS;gene=panB;go_function=3-methyl-2-oxobutanoate hydroxymethyltransferase activity|0003864||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000805487.1;locus_tag=PHA56_RS23390;product=3-methyl-2-oxobutanoate hydroxymethyltransferase;protein_id=WP_014227963.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4936384 4937238 . + . ID=gene-PHA56_RS23395;Name=panC;gbkey=Gene;gene=panC;gene_biotype=protein_coding;locus_tag=PHA56_RS23395;old_locus_tag=PHA56_23395 NZ_CP116214.1 Protein Homology CDS 4936384 4937238 . + 0 ID=cds-WP_014227962.1;Parent=gene-PHA56_RS23395;Dbxref=Genbank:WP_014227962.1;Name=WP_014227962.1;Ontology_term=GO:0015940,GO:0004592;gbkey=CDS;gene=panC;go_function=pantoate-beta-alanine ligase activity|0004592||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225167.1;locus_tag=PHA56_RS23395;product=pantoate--beta-alanine ligase;protein_id=WP_014227962.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4937332 4937712 . + . ID=gene-PHA56_RS23400;Name=panD;gbkey=Gene;gene=panD;gene_biotype=protein_coding;locus_tag=PHA56_RS23400;old_locus_tag=PHA56_23400 NZ_CP116214.1 Protein Homology CDS 4937332 4937712 . + 0 ID=cds-WP_004098675.1;Parent=gene-PHA56_RS23400;Dbxref=Genbank:WP_004098675.1;Name=WP_004098675.1;Ontology_term=GO:0015940,GO:0004068;gbkey=CDS;gene=panD;go_function=aspartate 1-decarboxylase activity|0004068||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124704.1;locus_tag=PHA56_RS23400;product=aspartate 1-decarboxylase;protein_id=WP_004098675.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4938029 4938634 . + . ID=gene-PHA56_RS23405;Name=PHA56_RS23405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS23405;old_locus_tag=PHA56_23405 NZ_CP116214.1 Protein Homology CDS 4938029 4938634 . + 0 ID=cds-WP_014227961.1;Parent=gene-PHA56_RS23405;Dbxref=Genbank:WP_014227961.1;Name=WP_014227961.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014837422.1;locus_tag=PHA56_RS23405;product=fimbrial protein;protein_id=WP_014227961.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4938698 4939420 . + . ID=gene-PHA56_RS23410;Name=PHA56_RS23410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS23410;old_locus_tag=PHA56_23410 NZ_CP116214.1 Protein Homology CDS 4938698 4939420 . + 0 ID=cds-WP_032720400.1;Parent=gene-PHA56_RS23410;Dbxref=Genbank:WP_032720400.1;Name=WP_032720400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017144968.1;locus_tag=PHA56_RS23410;product=fimbrial chaperone;protein_id=WP_032720400.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4939466 4942021 . + . ID=gene-PHA56_RS23415;Name=PHA56_RS23415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS23415;old_locus_tag=PHA56_23415 NZ_CP116214.1 Protein Homology CDS 4939466 4942021 . + 0 ID=cds-WP_032720398.1;Parent=gene-PHA56_RS23415;Dbxref=Genbank:WP_032720398.1;Name=WP_032720398.1;Ontology_term=GO:0009297,GO:0005515,GO:0015473,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein binding|0005515||IEA,fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004108017.1;locus_tag=PHA56_RS23415;product=outer membrane usher protein;protein_id=WP_032720398.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4942046 4942627 . + . ID=gene-PHA56_RS23420;Name=PHA56_RS23420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS23420;old_locus_tag=PHA56_23420 NZ_CP116214.1 Protein Homology CDS 4942046 4942627 . + 0 ID=cds-WP_014227958.1;Parent=gene-PHA56_RS23420;Dbxref=Genbank:WP_014227958.1;Name=WP_014227958.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004110627.1;locus_tag=PHA56_RS23420;product=fimbrial protein;protein_id=WP_014227958.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4942650 4943207 . + . ID=gene-PHA56_RS23425;Name=PHA56_RS23425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS23425;old_locus_tag=PHA56_23425 NZ_CP116214.1 Protein Homology CDS 4942650 4943207 . + 0 ID=cds-WP_014227957.1;Parent=gene-PHA56_RS23425;Dbxref=Genbank:WP_014227957.1;Name=WP_014227957.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014227957.1;locus_tag=PHA56_RS23425;product=fimbrial protein;protein_id=WP_014227957.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4943304 4943855 . + . ID=gene-PHA56_RS23430;Name=PHA56_RS23430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS23430;old_locus_tag=PHA56_23430 NZ_CP116214.1 Protein Homology CDS 4943304 4943855 . + 0 ID=cds-WP_014227956.1;Parent=gene-PHA56_RS23430;Dbxref=Genbank:WP_014227956.1;Name=WP_014227956.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014227956.1;locus_tag=PHA56_RS23430;product=fimbrial-like protein;protein_id=WP_014227956.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4943870 4944949 . + . ID=gene-PHA56_RS23435;Name=PHA56_RS23435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS23435;old_locus_tag=PHA56_23435 NZ_CP116214.1 Protein Homology CDS 4943870 4944949 . + 0 ID=cds-WP_032720397.1;Parent=gene-PHA56_RS23435;Dbxref=Genbank:WP_032720397.1;Name=WP_032720397.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014227955.1;locus_tag=PHA56_RS23435;product=fimbrial protein;protein_id=WP_032720397.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4944951 4946204 . - . ID=gene-PHA56_RS23440;Name=PHA56_RS23440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS23440;old_locus_tag=PHA56_23440 NZ_CP116214.1 Protein Homology CDS 4944951 4946204 . - 0 ID=cds-WP_038423355.1;Parent=gene-PHA56_RS23440;Dbxref=Genbank:WP_038423355.1;Name=WP_038423355.1;Ontology_term=GO:0005975,GO:0016810;gbkey=CDS;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225165.1;locus_tag=PHA56_RS23440;product=polysaccharide deacetylase family protein;protein_id=WP_038423355.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4946262 4946702 . - . ID=gene-PHA56_RS23445;Name=PHA56_RS23445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS23445;old_locus_tag=PHA56_23445 NZ_CP116214.1 Protein Homology CDS 4946262 4946702 . - 0 ID=cds-WP_038424074.1;Parent=gene-PHA56_RS23445;Dbxref=Genbank:WP_038424074.1;Name=WP_038424074.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225164.1;locus_tag=PHA56_RS23445;product=PTS sugar transporter subunit IIA;protein_id=WP_038424074.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4946824 4947594 . - . ID=gene-PHA56_RS23450;Name=PHA56_RS23450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS23450;old_locus_tag=PHA56_23450 NZ_CP116214.1 Protein Homology CDS 4946824 4947594 . - 0 ID=cds-WP_004098668.1;Parent=gene-PHA56_RS23450;Dbxref=Genbank:WP_004098668.1;Name=WP_004098668.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001747261.1;locus_tag=PHA56_RS23450;product=ABC transporter permease;protein_id=WP_004098668.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4947591 4948517 . - . ID=gene-PHA56_RS23455;Name=PHA56_RS23455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS23455;old_locus_tag=PHA56_23455 NZ_CP116214.1 Protein Homology CDS 4947591 4948517 . - 0 ID=cds-WP_014227952.1;Parent=gene-PHA56_RS23455;Dbxref=Genbank:WP_014227952.1;Name=WP_014227952.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225162.1;locus_tag=PHA56_RS23455;product=ABC transporter ATP-binding protein;protein_id=WP_014227952.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4948625 4949287 . + . ID=gene-PHA56_RS23460;Name=can;gbkey=Gene;gene=can;gene_biotype=protein_coding;locus_tag=PHA56_RS23460;old_locus_tag=PHA56_23460 NZ_CP116214.1 Protein Homology CDS 4948625 4949287 . + 0 ID=cds-WP_004098666.1;Parent=gene-PHA56_RS23460;Dbxref=Genbank:WP_004098666.1;Name=WP_004098666.1;Ontology_term=GO:0015976,GO:0004089,GO:0008270;gbkey=CDS;gene=can;go_function=carbonate dehydratase activity|0004089||IEA,zinc ion binding|0008270||IEA;go_process=carbon utilization|0015976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414668.1;locus_tag=PHA56_RS23460;product=carbonate dehydratase;protein_id=WP_004098666.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4949339 4949875 . - . ID=gene-PHA56_RS23465;Name=hpt;gbkey=Gene;gene=hpt;gene_biotype=protein_coding;locus_tag=PHA56_RS23465;old_locus_tag=PHA56_23465 NZ_CP116214.1 Protein Homology CDS 4949339 4949875 . - 0 ID=cds-WP_014227950.1;Parent=gene-PHA56_RS23465;Dbxref=Genbank:WP_014227950.1;Name=WP_014227950.1;Ontology_term=GO:0006166;gbkey=CDS;gene=hpt;go_process=purine ribonucleoside salvage|0006166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004204384.1;locus_tag=PHA56_RS23465;product=hypoxanthine phosphoribosyltransferase;protein_id=WP_014227950.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4950079 4952469 . + . ID=gene-PHA56_RS23470;Name=PHA56_RS23470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS23470;old_locus_tag=PHA56_23470 NZ_CP116214.1 Protein Homology CDS 4950079 4952469 . + 0 ID=cds-WP_014227949.1;Parent=gene-PHA56_RS23470;Dbxref=Genbank:WP_014227949.1;Name=WP_014227949.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225158.1;locus_tag=PHA56_RS23470;product=glucose/quinate/shikimate family membrane-bound PQQ-dependent dehydrogenase;protein_id=WP_014227949.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4952570 4954171 . - . ID=gene-PHA56_RS23475;Name=cueO;gbkey=Gene;gene=cueO;gene_biotype=protein_coding;locus_tag=PHA56_RS23475;old_locus_tag=PHA56_23475 NZ_CP116214.1 Protein Homology CDS 4952570 4954171 . - 0 ID=cds-WP_014227948.1;Parent=gene-PHA56_RS23475;Dbxref=Genbank:WP_014227948.1;Name=WP_014227948.1;Ontology_term=GO:0005507,GO:0016491;gbkey=CDS;gene=cueO;go_function=copper ion binding|0005507||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225157.1;locus_tag=PHA56_RS23475;product=multicopper oxidase CueO;protein_id=WP_014227948.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4954318 4954665 . + . ID=gene-PHA56_RS23480;Name=PHA56_RS23480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS23480;old_locus_tag=PHA56_23480 NZ_CP116214.1 Protein Homology CDS 4954318 4954665 . + 0 ID=cds-WP_014227947.1;Parent=gene-PHA56_RS23480;Dbxref=Genbank:WP_014227947.1;Name=WP_014227947.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414664.4;locus_tag=PHA56_RS23480;product=YacC family pilotin-like protein;protein_id=WP_014227947.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4955011 4955430 . + . ID=gene-PHA56_RS23485;Name=PHA56_RS23485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS23485;old_locus_tag=PHA56_23485 NZ_CP116214.1 Protein Homology CDS 4955011 4955430 . + 0 ID=cds-WP_032694409.1;Parent=gene-PHA56_RS23485;Dbxref=Genbank:WP_032694409.1;Name=WP_032694409.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020324423.1;locus_tag=PHA56_RS23485;product=hypothetical protein;protein_id=WP_032694409.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4955427 4957190 . + . ID=gene-PHA56_RS23490;Name=PHA56_RS23490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS23490;old_locus_tag=PHA56_23490 NZ_CP116214.1 Protein Homology CDS 4955427 4957190 . + 0 ID=cds-WP_014227946.1;Parent=gene-PHA56_RS23490;Dbxref=Genbank:WP_014227946.1;Name=WP_014227946.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017144976.1;locus_tag=PHA56_RS23490;product=FKBP-type peptidyl-prolyl cis-trans isomerase N-terminal domain-containing protein;protein_id=WP_014227946.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4957356 4958219 . + . ID=gene-PHA56_RS23495;Name=speE;gbkey=Gene;gene=speE;gene_biotype=protein_coding;locus_tag=PHA56_RS23495;old_locus_tag=PHA56_23495 NZ_CP116214.1 Protein Homology CDS 4957356 4958219 . + 0 ID=cds-WP_014227945.1;Parent=gene-PHA56_RS23495;Dbxref=Genbank:WP_014227945.1;Name=WP_014227945.1;gbkey=CDS;gene=speE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004872131.1;locus_tag=PHA56_RS23495;product=polyamine aminopropyltransferase;protein_id=WP_014227945.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4958234 4959028 . + . ID=gene-PHA56_RS23500;Name=speD;gbkey=Gene;gene=speD;gene_biotype=protein_coding;locus_tag=PHA56_RS23500;old_locus_tag=PHA56_23500 NZ_CP116214.1 Protein Homology CDS 4958234 4959028 . + 0 ID=cds-WP_004098656.1;Parent=gene-PHA56_RS23500;Dbxref=Genbank:WP_004098656.1;Name=WP_004098656.1;Ontology_term=GO:0008295,GO:0004014;gbkey=CDS;gene=speD;go_function=adenosylmethionine decarboxylase activity|0004014||IEA;go_process=spermidine biosynthetic process|0008295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225147.1;locus_tag=PHA56_RS23500;product=adenosylmethionine decarboxylase;protein_id=WP_004098656.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4959052 4959822 . - . ID=gene-PHA56_RS23505;Name=PHA56_RS23505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS23505;old_locus_tag=PHA56_23505 NZ_CP116214.1 Protein Homology CDS 4959052 4959822 . - 0 ID=cds-WP_014227944.1;Parent=gene-PHA56_RS23505;Dbxref=Genbank:WP_014227944.1;Name=WP_014227944.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004098653.1;locus_tag=PHA56_RS23505;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_014227944.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4959832 4960815 . - . ID=gene-PHA56_RS23510;Name=PHA56_RS23510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS23510;old_locus_tag=PHA56_23510 NZ_CP116214.1 Protein Homology CDS 4959832 4960815 . - 0 ID=cds-WP_014227943.1;Parent=gene-PHA56_RS23510;Dbxref=Genbank:WP_014227943.1;Name=WP_014227943.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459168.1;locus_tag=PHA56_RS23510;product=D-threonate 4-phosphate dehydrogenase;protein_id=WP_014227943.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4960805 4962076 . - . ID=gene-PHA56_RS23515;Name=PHA56_RS23515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS23515;old_locus_tag=PHA56_23515 NZ_CP116214.1 Protein Homology CDS 4960805 4962076 . - 0 ID=cds-WP_014227942.1;Parent=gene-PHA56_RS23515;Dbxref=Genbank:WP_014227942.1;Name=WP_014227942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459167.1;locus_tag=PHA56_RS23515;product=D-threonate kinase;protein_id=WP_014227942.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4962073 4963026 . - . ID=gene-PHA56_RS23520;Name=PHA56_RS23520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS23520;old_locus_tag=PHA56_23520 NZ_CP116214.1 Protein Homology CDS 4962073 4963026 . - 0 ID=cds-WP_014227941.1;Parent=gene-PHA56_RS23520;Dbxref=Genbank:WP_014227941.1;Name=WP_014227941.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459166.1;locus_tag=PHA56_RS23520;product=2-keto-3-deoxygluconate permease 1;protein_id=WP_014227941.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4963208 4963570 . - . ID=gene-PHA56_RS23525;Name=yacL;gbkey=Gene;gene=yacL;gene_biotype=protein_coding;locus_tag=PHA56_RS23525;old_locus_tag=PHA56_23525 NZ_CP116214.1 Protein Homology CDS 4963208 4963570 . - 0 ID=cds-WP_038424073.1;Parent=gene-PHA56_RS23525;Dbxref=Genbank:WP_038424073.1;Name=WP_038424073.1;gbkey=CDS;gene=yacL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459165.1;locus_tag=PHA56_RS23525;product=protein YacL;protein_id=WP_038424073.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4963746 4966343 . - . ID=gene-PHA56_RS23530;Name=acnB;gbkey=Gene;gene=acnB;gene_biotype=protein_coding;locus_tag=PHA56_RS23530;old_locus_tag=PHA56_23530 NZ_CP116214.1 Protein Homology CDS 4963746 4966343 . - 0 ID=cds-WP_004098644.1;Parent=gene-PHA56_RS23530;Dbxref=Genbank:WP_004098644.1;Name=WP_004098644.1;Ontology_term=GO:0006099,GO:0003994;gbkey=CDS;gene=acnB;go_function=aconitate hydratase activity|0003994||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459163.1;locus_tag=PHA56_RS23530;product=bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase;protein_id=WP_004098644.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4966699 4968294 . + . ID=gene-PHA56_RS23535;Name=PHA56_RS23535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS23535;old_locus_tag=PHA56_23535 NZ_CP116214.1 Protein Homology CDS 4966699 4968294 . + 0 ID=cds-WP_038424071.1;Parent=gene-PHA56_RS23535;Dbxref=Genbank:WP_038424071.1;Name=WP_038424071.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225143.1;locus_tag=PHA56_RS23535;product=DUF3300 domain-containing protein;protein_id=WP_038424071.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4968305 4969105 . + . ID=gene-PHA56_RS23540;Name=PHA56_RS23540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS23540;old_locus_tag=PHA56_23540 NZ_CP116214.1 Protein Homology CDS 4968305 4969105 . + 0 ID=cds-WP_038424070.1;Parent=gene-PHA56_RS23540;Dbxref=Genbank:WP_038424070.1;Name=WP_038424070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004098640.1;locus_tag=PHA56_RS23540;product=DUF2950 family protein;protein_id=WP_038424070.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4969156 4969440 . - . ID=gene-PHA56_RS23545;Name=PHA56_RS23545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS23545;old_locus_tag=PHA56_23545 NZ_CP116214.1 Protein Homology CDS 4969156 4969440 . - 0 ID=cds-WP_014227938.1;Parent=gene-PHA56_RS23545;Dbxref=Genbank:WP_014227938.1;Name=WP_014227938.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225141.1;locus_tag=PHA56_RS23545;product=hypothetical protein;protein_id=WP_014227938.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4969604 4971028 . - . ID=gene-PHA56_RS23550;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=PHA56_RS23550;old_locus_tag=PHA56_23550 NZ_CP116214.1 Protein Homology CDS 4969604 4971028 . - 0 ID=cds-WP_004098637.1;Parent=gene-PHA56_RS23550;Dbxref=Genbank:WP_004098637.1;Name=WP_004098637.1;Ontology_term=GO:0006096,GO:0045454,GO:0051068,GO:0004148;gbkey=CDS;gene=lpdA;go_function=dihydrolipoyl dehydrogenase activity|0004148||IEA;go_process=glycolytic process|0006096||IEA,cell redox homeostasis|0045454||IEA,dihydrolipoamide metabolic process|0051068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001738005.1;locus_tag=PHA56_RS23550;product=dihydrolipoyl dehydrogenase;protein_id=WP_004098637.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4971236 4973125 . - . ID=gene-PHA56_RS23555;Name=aceF;gbkey=Gene;gene=aceF;gene_biotype=protein_coding;locus_tag=PHA56_RS23555;old_locus_tag=PHA56_23555 NZ_CP116214.1 Protein Homology CDS 4971236 4973125 . - 0 ID=cds-WP_014227937.1;Parent=gene-PHA56_RS23555;Dbxref=Genbank:WP_014227937.1;Name=WP_014227937.1;Ontology_term=GO:0006096,GO:0004742,GO:0045254;gbkey=CDS;gene=aceF;go_component=pyruvate dehydrogenase complex|0045254||IEA;go_function=dihydrolipoyllysine-residue acetyltransferase activity|0004742||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225139.1;locus_tag=PHA56_RS23555;product=pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase;protein_id=WP_014227937.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4973140 4975803 . - . ID=gene-PHA56_RS23560;Name=aceE;gbkey=Gene;gene=aceE;gene_biotype=protein_coding;locus_tag=PHA56_RS23560;old_locus_tag=PHA56_23560 NZ_CP116214.1 Protein Homology CDS 4973140 4975803 . - 0 ID=cds-WP_004098634.1;Parent=gene-PHA56_RS23560;Dbxref=Genbank:WP_004098634.1;Name=WP_004098634.1;Ontology_term=GO:0006086,GO:0004738,GO:0045250;gbkey=CDS;gene=aceE;go_component=cytosolic pyruvate dehydrogenase complex|0045250||IEA;go_function=pyruvate dehydrogenase activity|0004738||IEA;go_process=acetyl-CoA biosynthetic process from pyruvate|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008814576.1;locus_tag=PHA56_RS23560;product=pyruvate dehydrogenase (acetyl-transferring)%2C homodimeric type;protein_id=WP_004098634.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4976045 4976824 . - . ID=gene-PHA56_RS23565;Name=pdhR;gbkey=Gene;gene=pdhR;gene_biotype=protein_coding;locus_tag=PHA56_RS23565;old_locus_tag=PHA56_23565 NZ_CP116214.1 Protein Homology CDS 4976045 4976824 . - 0 ID=cds-WP_004098632.1;Parent=gene-PHA56_RS23565;Dbxref=Genbank:WP_004098632.1;Name=WP_004098632.1;gbkey=CDS;gene=pdhR;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225137.1;locus_tag=PHA56_RS23565;product=pyruvate dehydrogenase complex transcriptional repressor PdhR;protein_id=WP_004098632.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4977478 4978848 . + . ID=gene-PHA56_RS23570;Name=aroP;gbkey=Gene;gene=aroP;gene_biotype=protein_coding;locus_tag=PHA56_RS23570;old_locus_tag=PHA56_23570 NZ_CP116214.1 Protein Homology CDS 4977478 4978848 . + 0 ID=cds-WP_086544283.1;Parent=gene-PHA56_RS23570;Dbxref=Genbank:WP_086544283.1;Name=WP_086544283.1;Ontology_term=GO:0006865;gbkey=CDS;gene=aroP;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414654.1;locus_tag=PHA56_RS23570;product=aromatic amino acid transporter AroP;protein_id=WP_086544283.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4979025 4980431 . + . ID=gene-PHA56_RS23575;Name=PHA56_RS23575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS23575;old_locus_tag=PHA56_23575 NZ_CP116214.1 Protein Homology CDS 4979025 4980431 . + 0 ID=cds-WP_014227935.1;Parent=gene-PHA56_RS23575;Dbxref=Genbank:WP_014227935.1;Name=WP_014227935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225134.1;locus_tag=PHA56_RS23575;product=MFS transporter;protein_id=WP_014227935.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4980431 4981381 . + . ID=gene-PHA56_RS23580;Name=PHA56_RS23580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS23580;old_locus_tag=PHA56_23580 NZ_CP116214.1 Protein Homology CDS 4980431 4981381 . + 0 ID=cds-WP_038424069.1;Parent=gene-PHA56_RS23580;Dbxref=Genbank:WP_038424069.1;Name=WP_038424069.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004098629.1;locus_tag=PHA56_RS23580;product=family 43 glycosylhydrolase;protein_id=WP_038424069.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4981412 4982266 . - . ID=gene-PHA56_RS23585;Name=ampE;gbkey=Gene;gene=ampE;gene_biotype=protein_coding;locus_tag=PHA56_RS23585;old_locus_tag=PHA56_23585 NZ_CP116214.1 Protein Homology CDS 4981412 4982266 . - 0 ID=cds-WP_014227933.1;Parent=gene-PHA56_RS23585;Dbxref=Genbank:WP_014227933.1;Name=WP_014227933.1;gbkey=CDS;gene=ampE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225132.1;locus_tag=PHA56_RS23585;product=beta-lactamase regulator AmpE;protein_id=WP_014227933.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4982276 4982827 . - . ID=gene-PHA56_RS23590;Name=ampD;gbkey=Gene;gene=ampD;gene_biotype=protein_coding;locus_tag=PHA56_RS23590;old_locus_tag=PHA56_23590 NZ_CP116214.1 Protein Homology CDS 4982276 4982827 . - 0 ID=cds-WP_014227932.1;Parent=gene-PHA56_RS23590;Dbxref=Genbank:WP_014227932.1;Name=WP_014227932.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=ampD;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004108091.1;locus_tag=PHA56_RS23590;product=1%2C6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD;protein_id=WP_014227932.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4983028 4983921 . + . ID=gene-PHA56_RS23595;Name=nadC;gbkey=Gene;gene=nadC;gene_biotype=protein_coding;locus_tag=PHA56_RS23595;old_locus_tag=PHA56_23595 NZ_CP116214.1 Protein Homology CDS 4983028 4983921 . + 0 ID=cds-WP_014227931.1;Parent=gene-PHA56_RS23595;Dbxref=Genbank:WP_014227931.1;Name=WP_014227931.1;Ontology_term=GO:0019363,GO:0004514;gbkey=CDS;gene=nadC;go_function=nicotinate-nucleotide diphosphorylase (carboxylating) activity|0004514||IEA;go_process=pyridine nucleotide biosynthetic process|0019363||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225130.1;locus_tag=PHA56_RS23595;product=carboxylating nicotinate-nucleotide diphosphorylase;protein_id=WP_014227931.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4984104 4984535 . + . ID=gene-PHA56_RS23600;Name=ppdD;gbkey=Gene;gene=ppdD;gene_biotype=protein_coding;locus_tag=PHA56_RS23600;old_locus_tag=PHA56_23600 NZ_CP116214.1 Protein Homology CDS 4984104 4984535 . + 0 ID=cds-WP_014227930.1;Parent=gene-PHA56_RS23600;Dbxref=Genbank:WP_014227930.1;Name=WP_014227930.1;gbkey=CDS;gene=ppdD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020079603.1;locus_tag=PHA56_RS23600;product=prepilin peptidase-dependent pilin;protein_id=WP_014227930.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4984546 4985931 . + . ID=gene-PHA56_RS23605;Name=gspE;gbkey=Gene;gene=gspE;gene_biotype=protein_coding;locus_tag=PHA56_RS23605;old_locus_tag=PHA56_23605 NZ_CP116214.1 Protein Homology CDS 4984546 4985931 . + 0 ID=cds-WP_014227929.1;Parent=gene-PHA56_RS23605;Dbxref=Genbank:WP_014227929.1;Name=WP_014227929.1;gbkey=CDS;gene=gspE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225128.1;locus_tag=PHA56_RS23605;product=type II secretion system protein GspE;protein_id=WP_014227929.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4985921 4987126 . + . ID=gene-PHA56_RS23610;Name=hofC;gbkey=Gene;gene=hofC;gene_biotype=protein_coding;locus_tag=PHA56_RS23610;old_locus_tag=PHA56_23610 NZ_CP116214.1 Protein Homology CDS 4985921 4987126 . + 0 ID=cds-WP_014227928.1;Parent=gene-PHA56_RS23610;Dbxref=Genbank:WP_014227928.1;Name=WP_014227928.1;Ontology_term=GO:0004827;gbkey=CDS;gene=hofC;go_function=proline-tRNA ligase activity|0004827||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016946231.1;locus_tag=PHA56_RS23610;product=protein transport protein HofC;protein_id=WP_014227928.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4987156 4988199 . - . ID=gene-PHA56_RS23615;Name=PHA56_RS23615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS23615;old_locus_tag=PHA56_23615 NZ_CP116214.1 Protein Homology CDS 4987156 4988199 . - 0 ID=cds-WP_009654638.1;Parent=gene-PHA56_RS23615;Dbxref=Genbank:WP_009654638.1;Name=WP_009654638.1;Ontology_term=GO:0009117,GO:0003920;gbkey=CDS;go_function=GMP reductase activity|0003920||IEA;go_process=nucleotide metabolic process|0009117||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008461816.1;locus_tag=PHA56_RS23615;product=GMP reductase;protein_id=WP_009654638.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4988548 4989168 . + . ID=gene-PHA56_RS23620;Name=coaE;gbkey=Gene;gene=coaE;gene_biotype=protein_coding;locus_tag=PHA56_RS23620;old_locus_tag=PHA56_23620 NZ_CP116214.1 Protein Homology CDS 4988548 4989168 . + 0 ID=cds-WP_004098610.1;Parent=gene-PHA56_RS23620;Dbxref=Genbank:WP_004098610.1;Name=WP_004098610.1;Note=Dephospho-CoA kinase (CoaE) performs the final step in coenzyme A biosynthesis.;Ontology_term=GO:0015937,GO:0004140,GO:0005737;gbkey=CDS;gene=coaE;go_component=cytoplasm|0005737||IEA;go_function=dephospho-CoA kinase activity|0004140||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459145.1;locus_tag=PHA56_RS23620;product=dephospho-CoA kinase;protein_id=WP_004098610.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4989168 4989911 . + . ID=gene-PHA56_RS23625;Name=zapD;gbkey=Gene;gene=zapD;gene_biotype=protein_coding;locus_tag=PHA56_RS23625;old_locus_tag=PHA56_23625 NZ_CP116214.1 Protein Homology CDS 4989168 4989911 . + 0 ID=cds-WP_014227927.1;Parent=gene-PHA56_RS23625;Dbxref=Genbank:WP_014227927.1;Name=WP_014227927.1;gbkey=CDS;gene=zapD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225123.1;locus_tag=PHA56_RS23625;product=cell division protein ZapD;protein_id=WP_014227927.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4989921 4990115 . + . ID=gene-PHA56_RS23630;Name=yacG;gbkey=Gene;gene=yacG;gene_biotype=protein_coding;locus_tag=PHA56_RS23630;old_locus_tag=PHA56_23630 NZ_CP116214.1 Protein Homology CDS 4989921 4990115 . + 0 ID=cds-WP_014227926.1;Parent=gene-PHA56_RS23630;Dbxref=Genbank:WP_014227926.1;Name=WP_014227926.1;Ontology_term=GO:0006355,GO:0008270;gbkey=CDS;gene=yacG;go_function=zinc ion binding|0008270||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004098607.1;locus_tag=PHA56_RS23630;product=DNA gyrase inhibitor YacG;protein_id=WP_014227926.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4990172 4990573 . - . ID=gene-PHA56_RS23635;Name=mutT;gbkey=Gene;gene=mutT;gene_biotype=protein_coding;locus_tag=PHA56_RS23635;old_locus_tag=PHA56_23635 NZ_CP116214.1 Protein Homology CDS 4990172 4990573 . - 0 ID=cds-WP_014227925.1;Parent=gene-PHA56_RS23635;Dbxref=Genbank:WP_014227925.1;Name=WP_014227925.1;Ontology_term=GO:0006281,GO:0008413;gbkey=CDS;gene=mutT;go_function=8-oxo-7%2C8-dihydroguanosine triphosphate pyrophosphatase activity|0008413||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004128968.1;locus_tag=PHA56_RS23635;product=8-oxo-dGTP diphosphatase MutT;protein_id=WP_014227925.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4990635 4993340 . - . ID=gene-PHA56_RS23640;Name=secA;gbkey=Gene;gene=secA;gene_biotype=protein_coding;locus_tag=PHA56_RS23640;old_locus_tag=PHA56_23640 NZ_CP116214.1 Protein Homology CDS 4990635 4993340 . - 0 ID=cds-WP_038424068.1;Parent=gene-PHA56_RS23640;Dbxref=Genbank:WP_038424068.1;Name=WP_038424068.1;Ontology_term=GO:0006605,GO:0006886,GO:0017038,GO:0005524;gbkey=CDS;gene=secA;go_function=ATP binding|0005524||IEA;go_process=protein targeting|0006605||IEA,intracellular protein transport|0006886||IEA,protein import|0017038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015704405.1;locus_tag=PHA56_RS23640;product=preprotein translocase subunit SecA;protein_id=WP_038424068.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4993403 4993912 . - . ID=gene-PHA56_RS23645;Name=secM;gbkey=Gene;gene=secM;gene_biotype=protein_coding;locus_tag=PHA56_RS23645;old_locus_tag=PHA56_23645 NZ_CP116214.1 Protein Homology CDS 4993403 4993912 . - 0 ID=cds-WP_014837406.1;Parent=gene-PHA56_RS23645;Dbxref=Genbank:WP_014837406.1;Name=WP_014837406.1;Ontology_term=GO:0045182;gbkey=CDS;gene=secM;go_function=translation regulator activity|0045182||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000014335.1;locus_tag=PHA56_RS23645;product=secA translation cis-regulator SecM;protein_id=WP_014837406.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4994160 4995077 . - . ID=gene-PHA56_RS23650;Name=lpxC;gbkey=Gene;gene=lpxC;gene_biotype=protein_coding;locus_tag=PHA56_RS23650;old_locus_tag=PHA56_23650 NZ_CP116214.1 Protein Homology CDS 4994160 4995077 . - 0 ID=cds-WP_004098599.1;Parent=gene-PHA56_RS23650;Dbxref=Genbank:WP_004098599.1;Name=WP_004098599.1;Ontology_term=GO:0009245,GO:0008759;gbkey=CDS;gene=lpxC;go_function=UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity|0008759||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308127.1;locus_tag=PHA56_RS23650;product=UDP-3-O-acyl-N-acetylglucosamine deacetylase;protein_id=WP_004098599.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4995178 4996329 . - . ID=gene-PHA56_RS23655;Name=ftsZ;gbkey=Gene;gene=ftsZ;gene_biotype=protein_coding;locus_tag=PHA56_RS23655;old_locus_tag=PHA56_23655 NZ_CP116214.1 Protein Homology CDS 4995178 4996329 . - 0 ID=cds-WP_004098597.1;Parent=gene-PHA56_RS23655;Dbxref=Genbank:WP_004098597.1;Name=WP_004098597.1;Ontology_term=GO:0000910,GO:0003924;gbkey=CDS;gene=ftsZ;go_function=GTPase activity|0003924||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965916.1;locus_tag=PHA56_RS23655;product=cell division protein FtsZ;protein_id=WP_004098597.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4996392 4997648 . - . ID=gene-PHA56_RS23660;Name=ftsA;gbkey=Gene;gene=ftsA;gene_biotype=protein_coding;locus_tag=PHA56_RS23660;old_locus_tag=PHA56_23660 NZ_CP116214.1 Protein Homology CDS 4996392 4997648 . - 0 ID=cds-WP_004098594.1;Parent=gene-PHA56_RS23660;Dbxref=Genbank:WP_004098594.1;Name=WP_004098594.1;Ontology_term=GO:0051301,GO:0005515;gbkey=CDS;gene=ftsA;go_function=protein binding|0005515||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225115.1;locus_tag=PHA56_RS23660;product=cell division protein FtsA;protein_id=WP_004098594.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4997645 4998478 . - . ID=gene-PHA56_RS23665;Name=ftsQ;gbkey=Gene;gene=ftsQ;gene_biotype=protein_coding;locus_tag=PHA56_RS23665;old_locus_tag=PHA56_23665 NZ_CP116214.1 Protein Homology CDS 4997645 4998478 . - 0 ID=cds-WP_014227923.1;Parent=gene-PHA56_RS23665;Dbxref=Genbank:WP_014227923.1;Name=WP_014227923.1;Ontology_term=GO:0090529;gbkey=CDS;gene=ftsQ;go_process=cell septum assembly|0090529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459136.1;locus_tag=PHA56_RS23665;product=cell division protein FtsQ;protein_id=WP_014227923.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4998480 4999400 . - . ID=gene-PHA56_RS23670;Name=PHA56_RS23670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS23670;old_locus_tag=PHA56_23670 NZ_CP116214.1 Protein Homology CDS 4998480 4999400 . - 0 ID=cds-WP_014227922.1;Parent=gene-PHA56_RS23670;Dbxref=Genbank:WP_014227922.1;Name=WP_014227922.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225113.1;locus_tag=PHA56_RS23670;product=D-alanine--D-alanine ligase;protein_id=WP_014227922.1;transl_table=11 NZ_CP116214.1 RefSeq gene 4999393 5000868 . - . ID=gene-PHA56_RS23675;Name=murC;gbkey=Gene;gene=murC;gene_biotype=protein_coding;locus_tag=PHA56_RS23675;old_locus_tag=PHA56_23675 NZ_CP116214.1 Protein Homology CDS 4999393 5000868 . - 0 ID=cds-WP_014227921.1;Parent=gene-PHA56_RS23675;Dbxref=Genbank:WP_014227921.1;Name=WP_014227921.1;Ontology_term=GO:0009252,GO:0008763;gbkey=CDS;gene=murC;go_function=UDP-N-acetylmuramate-L-alanine ligase activity|0008763||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459134.1;locus_tag=PHA56_RS23675;product=UDP-N-acetylmuramate--L-alanine ligase;protein_id=WP_014227921.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5000916 5001986 . - . ID=gene-PHA56_RS23680;Name=murG;gbkey=Gene;gene=murG;gene_biotype=protein_coding;locus_tag=PHA56_RS23680;old_locus_tag=PHA56_23680 NZ_CP116214.1 Protein Homology CDS 5000916 5001986 . - 0 ID=cds-WP_119834533.1;Parent=gene-PHA56_RS23680;Dbxref=Genbank:WP_119834533.1;Name=WP_119834533.1;Ontology_term=GO:0009252,GO:0050511;gbkey=CDS;gene=murG;go_function=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity|0050511||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225110.1;locus_tag=PHA56_RS23680;product=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase;protein_id=WP_119834533.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5001983 5003242 . - . ID=gene-PHA56_RS23685;Name=ftsW;gbkey=Gene;gene=ftsW;gene_biotype=protein_coding;locus_tag=PHA56_RS23685;old_locus_tag=PHA56_23685 NZ_CP116214.1 Protein Homology CDS 5001983 5003242 . - 0 ID=cds-WP_004098587.1;Parent=gene-PHA56_RS23685;Dbxref=Genbank:WP_004098587.1;Name=WP_004098587.1;Ontology_term=GO:0051301;gbkey=CDS;gene=ftsW;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225109.1;locus_tag=PHA56_RS23685;product=cell division protein FtsW;protein_id=WP_004098587.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5003242 5004558 . - . ID=gene-PHA56_RS23690;Name=murD;gbkey=Gene;gene=murD;gene_biotype=protein_coding;locus_tag=PHA56_RS23690;old_locus_tag=PHA56_23690 NZ_CP116214.1 Protein Homology CDS 5003242 5004558 . - 0 ID=cds-WP_014837404.1;Parent=gene-PHA56_RS23690;Dbxref=Genbank:WP_014837404.1;Name=WP_014837404.1;Ontology_term=GO:0009252,GO:0008764;gbkey=CDS;gene=murD;go_function=UDP-N-acetylmuramoylalanine-D-glutamate ligase activity|0008764||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124612.1;locus_tag=PHA56_RS23690;product=UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase;protein_id=WP_014837404.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5004561 5005643 . - . ID=gene-PHA56_RS23695;Name=mraY;gbkey=Gene;gene=mraY;gene_biotype=protein_coding;locus_tag=PHA56_RS23695;old_locus_tag=PHA56_23695 NZ_CP116214.1 Protein Homology CDS 5004561 5005643 . - 0 ID=cds-WP_004098585.1;Parent=gene-PHA56_RS23695;Dbxref=Genbank:WP_004098585.1;Name=WP_004098585.1;Ontology_term=GO:0009252,GO:0008963;gbkey=CDS;gene=mraY;go_function=phospho-N-acetylmuramoyl-pentapeptide-transferase activity|0008963||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124610.1;locus_tag=PHA56_RS23695;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;protein_id=WP_004098585.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5005637 5006995 . - . ID=gene-PHA56_RS23700;Name=murF;gbkey=Gene;gene=murF;gene_biotype=protein_coding;locus_tag=PHA56_RS23700;old_locus_tag=PHA56_23700 NZ_CP116214.1 Protein Homology CDS 5005637 5006995 . - 0 ID=cds-WP_014837403.1;Parent=gene-PHA56_RS23700;Dbxref=Genbank:WP_014837403.1;Name=WP_014837403.1;Ontology_term=GO:0009058,GO:0071555,GO:0005524,GO:0047480;gbkey=CDS;gene=murF;go_function=ATP binding|0005524||IEA,UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity|0047480||IEA;go_process=biosynthetic process|0009058||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225106.1;locus_tag=PHA56_RS23700;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;protein_id=WP_014837403.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5006992 5008479 . - . ID=gene-PHA56_RS23705;Name=murE;gbkey=Gene;gene=murE;gene_biotype=protein_coding;locus_tag=PHA56_RS23705;old_locus_tag=PHA56_23705 NZ_CP116214.1 Protein Homology CDS 5006992 5008479 . - 0 ID=cds-WP_014837402.1;Parent=gene-PHA56_RS23705;Dbxref=Genbank:WP_014837402.1;Name=WP_014837402.1;Ontology_term=GO:0008360,GO:0009058,GO:0051301,GO:0005524,GO:0016881;gbkey=CDS;gene=murE;go_function=ATP binding|0005524||IEA,acid-amino acid ligase activity|0016881||IEA;go_process=regulation of cell shape|0008360||IEA,biosynthetic process|0009058||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225105.1;locus_tag=PHA56_RS23705;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-diaminopimelate ligase;protein_id=WP_014837402.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5008466 5010232 . - . ID=gene-PHA56_RS23710;Name=PHA56_RS23710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS23710;old_locus_tag=PHA56_23710 NZ_CP116214.1 Protein Homology CDS 5008466 5010232 . - 0 ID=cds-WP_004098582.1;Parent=gene-PHA56_RS23710;Dbxref=Genbank:WP_004098582.1;Name=WP_004098582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000642204.1;locus_tag=PHA56_RS23710;product=peptidoglycan glycosyltransferase FtsI;protein_id=WP_004098582.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5010248 5010613 . - . ID=gene-PHA56_RS23715;Name=ftsL;gbkey=Gene;gene=ftsL;gene_biotype=protein_coding;locus_tag=PHA56_RS23715;old_locus_tag=PHA56_23715 NZ_CP116214.1 Protein Homology CDS 5010248 5010613 . - 0 ID=cds-WP_002888550.1;Parent=gene-PHA56_RS23715;Dbxref=Genbank:WP_002888550.1;Name=WP_002888550.1;gbkey=CDS;gene=ftsL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000625658.1;locus_tag=PHA56_RS23715;product=cell division protein FtsL;protein_id=WP_002888550.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5010610 5011551 . - . ID=gene-PHA56_RS23720;Name=rsmH;gbkey=Gene;gene=rsmH;gene_biotype=protein_coding;locus_tag=PHA56_RS23720;old_locus_tag=PHA56_23720 NZ_CP116214.1 Protein Homology CDS 5010610 5011551 . - 0 ID=cds-WP_004098579.1;Parent=gene-PHA56_RS23720;Dbxref=Genbank:WP_004098579.1;Name=WP_004098579.1;Ontology_term=GO:0016434;gbkey=CDS;gene=rsmH;go_function=rRNA (cytosine) methyltransferase activity|0016434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124563.1;locus_tag=PHA56_RS23720;product=16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH;protein_id=WP_004098579.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5011553 5012011 . - . ID=gene-PHA56_RS23725;Name=mraZ;gbkey=Gene;gene=mraZ;gene_biotype=protein_coding;locus_tag=PHA56_RS23725;old_locus_tag=PHA56_23725 NZ_CP116214.1 Protein Homology CDS 5011553 5012011 . - 0 ID=cds-WP_009654608.1;Parent=gene-PHA56_RS23725;Dbxref=Genbank:WP_009654608.1;Name=WP_009654608.1;Ontology_term=GO:0051302,GO:0043565;gbkey=CDS;gene=mraZ;go_function=sequence-specific DNA binding|0043565||IEA;go_process=regulation of cell division|0051302||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020325403.1;locus_tag=PHA56_RS23725;product=division/cell wall cluster transcriptional repressor MraZ;protein_id=WP_009654608.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5012638 5013642 . - . ID=gene-PHA56_RS23730;Name=cra;gbkey=Gene;gene=cra;gene_biotype=protein_coding;locus_tag=PHA56_RS23730;old_locus_tag=PHA56_23730 NZ_CP116214.1 Protein Homology CDS 5012638 5013642 . - 0 ID=cds-WP_004098577.1;Parent=gene-PHA56_RS23730;Dbxref=Genbank:WP_004098577.1;Name=WP_004098577.1;Ontology_term=GO:0006355,GO:0009750,GO:0003677;gbkey=CDS;gene=cra;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,response to fructose|0009750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225100.1;locus_tag=PHA56_RS23730;product=catabolite repressor/activator;protein_id=WP_004098577.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5013823 5014314 . - . ID=gene-PHA56_RS23735;Name=ilvN;gbkey=Gene;gene=ilvN;gene_biotype=protein_coding;locus_tag=PHA56_RS23735;old_locus_tag=PHA56_23735 NZ_CP116214.1 Protein Homology CDS 5013823 5014314 . - 0 ID=cds-WP_004098573.1;Parent=gene-PHA56_RS23735;Dbxref=Genbank:WP_004098573.1;Name=WP_004098573.1;Ontology_term=GO:0009082,GO:1990610;gbkey=CDS;gene=ilvN;go_function=acetolactate synthase regulator activity|1990610||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001563086.1;locus_tag=PHA56_RS23735;product=acetolactate synthase small subunit;protein_id=WP_004098573.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5014317 5016041 . - . ID=gene-PHA56_RS23740;Name=ilvI;gbkey=Gene;gene=ilvI;gene_biotype=protein_coding;locus_tag=PHA56_RS23740;old_locus_tag=PHA56_23740 NZ_CP116214.1 Protein Homology CDS 5014317 5016041 . - 0 ID=cds-WP_025106489.1;Parent=gene-PHA56_RS23740;Dbxref=Genbank:WP_025106489.1;Name=WP_025106489.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvI;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020079613.1;locus_tag=PHA56_RS23740;product=acetolactate synthase 3 large subunit;protein_id=WP_025106489.1;transl_table=11 NZ_CP116214.1 RefSeq pseudogene 5016433 5017401 . - . ID=gene-PHA56_RS23745;Name=leuO;gbkey=Gene;gene=leuO;gene_biotype=pseudogene;locus_tag=PHA56_RS23745;old_locus_tag=PHA56_23745;pseudo=true NZ_CP116214.1 Protein Homology CDS 5016433 5017401 . - 0 ID=cds-PHA56_RS23745;Parent=gene-PHA56_RS23745;Note=internal stop;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=leuO;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225097.1;locus_tag=PHA56_RS23745;product=transcriptional regulator LeuO;pseudo=true;transl_table=11 NZ_CP116214.1 RefSeq gene 5018187 5019758 . + . ID=gene-PHA56_RS23750;Name=leuA;gbkey=Gene;gene=leuA;gene_biotype=protein_coding;locus_tag=PHA56_RS23750;old_locus_tag=PHA56_23750 NZ_CP116214.1 Protein Homology CDS 5018187 5019758 . + 0 ID=cds-WP_004098567.1;Parent=gene-PHA56_RS23750;Dbxref=Genbank:WP_004098567.1;Name=WP_004098567.1;Ontology_term=GO:0019752,GO:0003852;gbkey=CDS;gene=leuA;go_function=2-isopropylmalate synthase activity|0003852||IEA;go_process=carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016831521.1;locus_tag=PHA56_RS23750;product=2-isopropylmalate synthase;protein_id=WP_004098567.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5019758 5020849 . + . ID=gene-PHA56_RS23755;Name=leuB;gbkey=Gene;gene=leuB;gene_biotype=protein_coding;locus_tag=PHA56_RS23755;old_locus_tag=PHA56_23755 NZ_CP116214.1 Protein Homology CDS 5019758 5020849 . + 0 ID=cds-WP_004098566.1;Parent=gene-PHA56_RS23755;Dbxref=Genbank:WP_004098566.1;Name=WP_004098566.1;Ontology_term=GO:0009098,GO:0003862;gbkey=CDS;gene=leuB;go_function=3-isopropylmalate dehydrogenase activity|0003862||IEA;go_process=leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124544.1;locus_tag=PHA56_RS23755;product=3-isopropylmalate dehydrogenase;protein_id=WP_004098566.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5020852 5022252 . + . ID=gene-PHA56_RS23760;Name=leuC;gbkey=Gene;gene=leuC;gene_biotype=protein_coding;locus_tag=PHA56_RS23760;old_locus_tag=PHA56_23760 NZ_CP116214.1 Protein Homology CDS 5020852 5022252 . + 0 ID=cds-WP_014227914.1;Parent=gene-PHA56_RS23760;Dbxref=Genbank:WP_014227914.1;Name=WP_014227914.1;Ontology_term=GO:0009098,GO:0003861,GO:0009316;gbkey=CDS;gene=leuC;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225093.1;locus_tag=PHA56_RS23760;product=3-isopropylmalate dehydratase large subunit;protein_id=WP_014227914.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5022263 5022868 . + . ID=gene-PHA56_RS23765;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;locus_tag=PHA56_RS23765;old_locus_tag=PHA56_23765 NZ_CP116214.1 Protein Homology CDS 5022263 5022868 . + 0 ID=cds-WP_014227913.1;Parent=gene-PHA56_RS23765;Dbxref=Genbank:WP_014227913.1;Name=WP_014227913.1;Ontology_term=GO:0009098,GO:0003861,GO:0009316;gbkey=CDS;gene=leuD;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225092.1;locus_tag=PHA56_RS23765;product=3-isopropylmalate dehydratase small subunit;protein_id=WP_014227913.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5023271 5025304 . + . ID=gene-PHA56_RS23770;Name=PHA56_RS23770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS23770;old_locus_tag=PHA56_23770 NZ_CP116214.1 Protein Homology CDS 5023271 5025304 . + 0 ID=cds-WP_014227912.1;Parent=gene-PHA56_RS23770;Dbxref=Genbank:WP_014227912.1;Name=WP_014227912.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225091.1;locus_tag=PHA56_RS23770;product=FAD-dependent oxidoreductase;protein_id=WP_014227912.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5025315 5026178 . + . ID=gene-PHA56_RS23775;Name=PHA56_RS23775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS23775;old_locus_tag=PHA56_23775 NZ_CP116214.1 Protein Homology CDS 5025315 5026178 . + 0 ID=cds-WP_014227911.1;Parent=gene-PHA56_RS23775;Dbxref=Genbank:WP_014227911.1;Name=WP_014227911.1;Ontology_term=GO:0019632,GO:0004764,GO:0050661;gbkey=CDS;go_function=shikimate 3-dehydrogenase (NADP+) activity|0004764||IEA,NADP binding|0050661||IEA;go_process=shikimate metabolic process|0019632||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225090.1;locus_tag=PHA56_RS23775;product=shikimate dehydrogenase;protein_id=WP_014227911.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5026190 5027404 . + . ID=gene-PHA56_RS23780;Name=PHA56_RS23780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS23780;old_locus_tag=PHA56_23780 NZ_CP116214.1 Protein Homology CDS 5026190 5027404 . + 0 ID=cds-WP_014227910.1;Parent=gene-PHA56_RS23780;Dbxref=Genbank:WP_014227910.1;Name=WP_014227910.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225089.1;locus_tag=PHA56_RS23780;product=MFS transporter;protein_id=WP_014227910.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5027438 5028193 . + . ID=gene-PHA56_RS23785;Name=aroD;gbkey=Gene;gene=aroD;gene_biotype=protein_coding;locus_tag=PHA56_RS23785;old_locus_tag=PHA56_23785 NZ_CP116214.1 Protein Homology CDS 5027438 5028193 . + 0 ID=cds-WP_014837399.1;Parent=gene-PHA56_RS23785;Dbxref=Genbank:WP_014837399.1;Name=WP_014837399.1;Ontology_term=GO:0009423,GO:0003855;gbkey=CDS;gene=aroD;go_function=3-dehydroquinate dehydratase activity|0003855||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225088.1;locus_tag=PHA56_RS23785;product=type I 3-dehydroquinate dehydratase;protein_id=WP_014837399.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5028232 5029128 . - . ID=gene-PHA56_RS23790;Name=PHA56_RS23790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS23790;old_locus_tag=PHA56_23790 NZ_CP116214.1 Protein Homology CDS 5028232 5029128 . - 0 ID=cds-WP_014837398.1;Parent=gene-PHA56_RS23790;Dbxref=Genbank:WP_014837398.1;Name=WP_014837398.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014837398.1;locus_tag=PHA56_RS23790;product=LysR family transcriptional regulator;protein_id=WP_014837398.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5029359 5030672 . + . ID=gene-PHA56_RS23795;Name=PHA56_RS23795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS23795;old_locus_tag=PHA56_23795 NZ_CP116214.1 Protein Homology CDS 5029359 5030672 . + 0 ID=cds-WP_271292937.1;Parent=gene-PHA56_RS23795;Dbxref=Genbank:WP_271292937.1;Name=WP_271292937.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014837397.1;locus_tag=PHA56_RS23795;product=MFS transporter;protein_id=WP_271292937.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5030720 5031904 . - . ID=gene-PHA56_RS23800;Name=PHA56_RS23800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS23800;old_locus_tag=PHA56_23800 NZ_CP116214.1 Protein Homology CDS 5030720 5031904 . - 0 ID=cds-WP_009654594.1;Parent=gene-PHA56_RS23800;Dbxref=Genbank:WP_009654594.1;Name=WP_009654594.1;Ontology_term=GO:0008643,GO:0005351;gbkey=CDS;go_function=carbohydrate:proton symporter activity|0005351||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225085.1;locus_tag=PHA56_RS23800;product=sugar efflux transporter;protein_id=WP_009654594.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5032133 5032285 . - . ID=gene-PHA56_RS23805;Name=PHA56_RS23805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS23805;old_locus_tag=PHA56_23805 NZ_CP116214.1 Protein Homology CDS 5032133 5032285 . - 0 ID=cds-WP_004098552.1;Parent=gene-PHA56_RS23805;Dbxref=Genbank:WP_004098552.1;Name=WP_004098552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225083.1;locus_tag=PHA56_RS23805;product=glucose uptake inhibitor SgrT;protein_id=WP_004098552.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5032373 5034028 . + . ID=gene-PHA56_RS23810;Name=sgrR;gbkey=Gene;gene=sgrR;gene_biotype=protein_coding;locus_tag=PHA56_RS23810;old_locus_tag=PHA56_23810 NZ_CP116214.1 Protein Homology CDS 5032373 5034028 . + 0 ID=cds-WP_014227906.1;Parent=gene-PHA56_RS23810;Dbxref=Genbank:WP_014227906.1;Name=WP_014227906.1;gbkey=CDS;gene=sgrR;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225082.1;locus_tag=PHA56_RS23810;product=HTH-type transcriptional regulator SgrR;protein_id=WP_014227906.1;transl_table=11 NZ_CP116214.1 cmsearch riboswitch 5034066 5034228 . + . ID=id-NZ_CP116214.1:5034066..5034228;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NZ_CP116214.1 RefSeq gene 5034260 5035243 . + . ID=gene-PHA56_RS23815;Name=thiB;gbkey=Gene;gene=thiB;gene_biotype=protein_coding;locus_tag=PHA56_RS23815;old_locus_tag=PHA56_23815 NZ_CP116214.1 Protein Homology CDS 5034260 5035243 . + 0 ID=cds-WP_014837396.1;Parent=gene-PHA56_RS23815;Dbxref=Genbank:WP_014837396.1;Name=WP_014837396.1;Ontology_term=GO:0015888,GO:0030974,GO:0030975,GO:0030976,GO:0048502,GO:0009897,GO:0030288,GO:0055052;gbkey=CDS;gene=thiB;go_component=external side of plasma membrane|0009897||IEA,outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=thiamine binding|0030975||IEA,thiamine pyrophosphate binding|0030976||IEA,ABC-type thiamine transporter activity|0048502||IEA;go_process=thiamine transport|0015888||IEA,thiamine pyrophosphate transmembrane transport|0030974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225081.1;locus_tag=PHA56_RS23815;product=thiamine ABC transporter substrate binding subunit;protein_id=WP_014837396.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5035219 5036829 . + . ID=gene-PHA56_RS23820;Name=thiP;gbkey=Gene;gene=thiP;gene_biotype=protein_coding;locus_tag=PHA56_RS23820;old_locus_tag=PHA56_23820 NZ_CP116214.1 Protein Homology CDS 5035219 5036829 . + 0 ID=cds-WP_014837395.1;Parent=gene-PHA56_RS23820;Dbxref=Genbank:WP_014837395.1;Name=WP_014837395.1;gbkey=CDS;gene=thiP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225080.1;locus_tag=PHA56_RS23820;product=thiamine/thiamine pyrophosphate ABC transporter permease ThiP;protein_id=WP_014837395.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5036813 5037514 . + . ID=gene-PHA56_RS23825;Name=thiQ;gbkey=Gene;gene=thiQ;gene_biotype=protein_coding;locus_tag=PHA56_RS23825;old_locus_tag=PHA56_23825 NZ_CP116214.1 Protein Homology CDS 5036813 5037514 . + 0 ID=cds-WP_014837394.1;Parent=gene-PHA56_RS23825;Dbxref=Genbank:WP_014837394.1;Name=WP_014837394.1;gbkey=CDS;gene=thiQ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225079.1;locus_tag=PHA56_RS23825;product=thiamine ABC transporter ATP-binding protein ThiQ;protein_id=WP_014837394.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5037501 5038268 . - . ID=gene-PHA56_RS23830;Name=PHA56_RS23830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS23830;old_locus_tag=PHA56_23830 NZ_CP116214.1 Protein Homology CDS 5037501 5038268 . - 0 ID=cds-WP_014227902.1;Parent=gene-PHA56_RS23830;Dbxref=Genbank:WP_014227902.1;Name=WP_014227902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225078.1;locus_tag=PHA56_RS23830;product=DedA family protein;protein_id=WP_014227902.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5038397 5039242 . - . ID=gene-PHA56_RS23835;Name=araC;gbkey=Gene;gene=araC;gene_biotype=protein_coding;locus_tag=PHA56_RS23835;old_locus_tag=PHA56_23835 NZ_CP116214.1 Protein Homology CDS 5038397 5039242 . - 0 ID=cds-WP_004098545.1;Parent=gene-PHA56_RS23835;Dbxref=Genbank:WP_004098545.1;Name=WP_004098545.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=araC;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225077.1;locus_tag=PHA56_RS23835;product=arabinose operon transcriptional regulator AraC;protein_id=WP_004098545.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5039580 5041289 . + . ID=gene-PHA56_RS23840;Name=araB;gbkey=Gene;gene=araB;gene_biotype=protein_coding;locus_tag=PHA56_RS23840;old_locus_tag=PHA56_23840 NZ_CP116214.1 Protein Homology CDS 5039580 5041289 . + 0 ID=cds-WP_038424065.1;Parent=gene-PHA56_RS23840;Dbxref=Genbank:WP_038424065.1;Name=WP_038424065.1;Ontology_term=GO:0019568,GO:0008741;gbkey=CDS;gene=araB;go_function=ribulokinase activity|0008741||IEA;go_process=arabinose catabolic process|0019568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225075.1;locus_tag=PHA56_RS23840;product=ribulokinase;protein_id=WP_038424065.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5041300 5042802 . + . ID=gene-PHA56_RS23845;Name=araA;gbkey=Gene;gene=araA;gene_biotype=protein_coding;locus_tag=PHA56_RS23845;old_locus_tag=PHA56_23845 NZ_CP116214.1 Protein Homology CDS 5041300 5042802 . + 0 ID=cds-WP_014837391.1;Parent=gene-PHA56_RS23845;Dbxref=Genbank:WP_014837391.1;Name=WP_014837391.1;Ontology_term=GO:0005996,GO:0008733;gbkey=CDS;gene=araA;go_function=L-arabinose isomerase activity|0008733||IEA;go_process=monosaccharide metabolic process|0005996||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225074.1;locus_tag=PHA56_RS23845;product=L-arabinose isomerase;protein_id=WP_014837391.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5042876 5043571 . + . ID=gene-PHA56_RS23850;Name=araD;gbkey=Gene;gene=araD;gene_biotype=protein_coding;locus_tag=PHA56_RS23850;old_locus_tag=PHA56_23850 NZ_CP116214.1 Protein Homology CDS 5042876 5043571 . + 0 ID=cds-WP_014227900.1;Parent=gene-PHA56_RS23850;Dbxref=Genbank:WP_014227900.1;Name=WP_014227900.1;Ontology_term=GO:0019568,GO:0008742;gbkey=CDS;gene=araD;go_function=L-ribulose-phosphate 4-epimerase activity|0008742||IEA;go_process=arabinose catabolic process|0019568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225073.1;locus_tag=PHA56_RS23850;product=L-ribulose-5-phosphate 4-epimerase;protein_id=WP_014227900.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5043729 5046086 . + . ID=gene-PHA56_RS23855;Name=polB;gbkey=Gene;gene=polB;gene_biotype=protein_coding;locus_tag=PHA56_RS23855;old_locus_tag=PHA56_23855 NZ_CP116214.1 Protein Homology CDS 5043729 5046086 . + 0 ID=cds-WP_038424064.1;Parent=gene-PHA56_RS23855;Dbxref=Genbank:WP_038424064.1;Name=WP_038424064.1;Ontology_term=GO:0003677,GO:0003887;gbkey=CDS;gene=polB;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225072.1;locus_tag=PHA56_RS23855;product=DNA polymerase II;protein_id=WP_038424064.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5046274 5049180 . + . ID=gene-PHA56_RS23860;Name=rapA;gbkey=Gene;gene=rapA;gene_biotype=protein_coding;locus_tag=PHA56_RS23860;old_locus_tag=PHA56_23860 NZ_CP116214.1 Protein Homology CDS 5046274 5049180 . + 0 ID=cds-WP_189087270.1;Parent=gene-PHA56_RS23860;Dbxref=Genbank:WP_189087270.1;Name=WP_189087270.1;Ontology_term=GO:0006355,GO:0005524,GO:0016817,GO:0140658;gbkey=CDS;gene=rapA;go_function=ATP binding|0005524||IEA,hydrolase activity%2C acting on acid anhydrides|0016817||IEA,ATP-dependent chromatin remodeler activity|0140658||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001117023.1;locus_tag=PHA56_RS23860;product=RNA polymerase-associated protein RapA;protein_id=WP_189087270.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5049193 5049852 . + . ID=gene-PHA56_RS23865;Name=rluA;gbkey=Gene;gene=rluA;gene_biotype=protein_coding;locus_tag=PHA56_RS23865;old_locus_tag=PHA56_23865 NZ_CP116214.1 Protein Homology CDS 5049193 5049852 . + 0 ID=cds-WP_014837390.1;Parent=gene-PHA56_RS23865;Dbxref=Genbank:WP_014837390.1;Name=WP_014837390.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=rluA;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225070.1;locus_tag=PHA56_RS23865;product=bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA;protein_id=WP_014837390.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5049934 5050473 . - . ID=gene-PHA56_RS23870;Name=citX;gbkey=Gene;gene=citX;gene_biotype=protein_coding;locus_tag=PHA56_RS23870;old_locus_tag=PHA56_23870 NZ_CP116214.1 Protein Homology CDS 5049934 5050473 . - 0 ID=cds-WP_004098536.1;Parent=gene-PHA56_RS23870;Dbxref=Genbank:WP_004098536.1;Name=WP_004098536.1;Ontology_term=GO:0051191,GO:0050519;gbkey=CDS;gene=citX;go_function=holo-citrate lyase synthase activity|0050519||IEA;go_process=prosthetic group biosynthetic process|0051191||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225069.1;locus_tag=PHA56_RS23870;product=citrate lyase holo-[acyl-carrier protein] synthase;protein_id=WP_004098536.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5050642 5051997 . - . ID=gene-PHA56_RS23875;Name=PHA56_RS23875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS23875;old_locus_tag=PHA56_23875 NZ_CP116214.1 Protein Homology CDS 5050642 5051997 . - 0 ID=cds-WP_004098535.1;Parent=gene-PHA56_RS23875;Dbxref=Genbank:WP_004098535.1;Name=WP_004098535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225067.1;locus_tag=PHA56_RS23875;product=2-hydroxycarboxylate transporter family protein;protein_id=WP_004098535.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5052320 5053945 . + . ID=gene-PHA56_RS23880;Name=PHA56_RS23880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS23880;old_locus_tag=PHA56_23880 NZ_CP116214.1 Protein Homology CDS 5052320 5053945 . + 0 ID=cds-WP_014837388.1;Parent=gene-PHA56_RS23880;Dbxref=Genbank:WP_014837388.1;Name=WP_014837388.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004872236.1;locus_tag=PHA56_RS23880;product=sensor histidine kinase;protein_id=WP_014837388.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5053935 5054633 . + . ID=gene-PHA56_RS23885;Name=PHA56_RS23885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS23885;old_locus_tag=PHA56_23885 NZ_CP116214.1 Protein Homology CDS 5053935 5054633 . + 0 ID=cds-WP_025106473.1;Parent=gene-PHA56_RS23885;Dbxref=Genbank:WP_025106473.1;Name=WP_025106473.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225065.1;locus_tag=PHA56_RS23885;product=response regulator;protein_id=WP_025106473.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5054664 5055491 . - . ID=gene-PHA56_RS23890;Name=djlA;gbkey=Gene;gene=djlA;gene_biotype=protein_coding;locus_tag=PHA56_RS23890;old_locus_tag=PHA56_23890 NZ_CP116214.1 Protein Homology CDS 5054664 5055491 . - 0 ID=cds-WP_014837387.1;Parent=gene-PHA56_RS23890;Dbxref=Genbank:WP_014837387.1;Name=WP_014837387.1;Ontology_term=GO:0051087;gbkey=CDS;gene=djlA;go_function=chaperone binding|0051087||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225064.1;locus_tag=PHA56_RS23890;product=co-chaperone DjlA;protein_id=WP_014837387.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5055736 5058078 . + . ID=gene-PHA56_RS23895;Name=lptD;gbkey=Gene;gene=lptD;gene_biotype=protein_coding;locus_tag=PHA56_RS23895;old_locus_tag=PHA56_23895 NZ_CP116214.1 Protein Homology CDS 5055736 5058078 . + 0 ID=cds-WP_014227893.1;Parent=gene-PHA56_RS23895;Dbxref=Genbank:WP_014227893.1;Name=WP_014227893.1;Ontology_term=GO:0010033,GO:0015920,GO:0043165,GO:0019867;gbkey=CDS;gene=lptD;go_component=outer membrane|0019867||IEA;go_process=response to organic substance|0010033||IEA,lipopolysaccharide transport|0015920||IEA,Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414596.1;locus_tag=PHA56_RS23895;product=LPS assembly protein LptD;protein_id=WP_014227893.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5058132 5059418 . + . ID=gene-PHA56_RS23900;Name=surA;gbkey=Gene;gene=surA;gene_biotype=protein_coding;locus_tag=PHA56_RS23900;old_locus_tag=PHA56_23900 NZ_CP116214.1 Protein Homology CDS 5058132 5059418 . + 0 ID=cds-WP_004098530.1;Parent=gene-PHA56_RS23900;Dbxref=Genbank:WP_004098530.1;Name=WP_004098530.1;Ontology_term=GO:0006457,GO:0043165,GO:0050821,GO:0060274,GO:0003755,GO:0042277,GO:0051082,GO:0030288;gbkey=CDS;gene=surA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,peptide binding|0042277||IEA,unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA,Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA,protein stabilization|0050821||IEA,maintenance of stationary phase|0060274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225062.1;locus_tag=PHA56_RS23900;product=peptidylprolyl isomerase SurA;protein_id=WP_004098530.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5059531 5060520 . + . ID=gene-PHA56_RS23905;Name=pdxA;gbkey=Gene;gene=pdxA;gene_biotype=protein_coding;locus_tag=PHA56_RS23905;old_locus_tag=PHA56_23905 NZ_CP116214.1 Protein Homology CDS 5059531 5060520 . + 0 ID=cds-WP_032720371.1;Parent=gene-PHA56_RS23905;Dbxref=Genbank:WP_032720371.1;Name=WP_032720371.1;Ontology_term=GO:0008615,GO:0050570;gbkey=CDS;gene=pdxA;go_function=4-hydroxythreonine-4-phosphate dehydrogenase activity|0050570||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012968953.1;locus_tag=PHA56_RS23905;product=4-hydroxythreonine-4-phosphate dehydrogenase PdxA;protein_id=WP_032720371.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5060517 5061338 . + . ID=gene-PHA56_RS23910;Name=rsmA;gbkey=Gene;gene=rsmA;gene_biotype=protein_coding;locus_tag=PHA56_RS23910;old_locus_tag=PHA56_23910 NZ_CP116214.1 Protein Homology CDS 5060517 5061338 . + 0 ID=cds-WP_004098527.1;Parent=gene-PHA56_RS23910;Dbxref=Genbank:WP_004098527.1;Name=WP_004098527.1;Ontology_term=GO:0000179;gbkey=CDS;gene=rsmA;go_function=rRNA (adenine-N6%2CN6-)-dimethyltransferase activity|0000179||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225060.1;locus_tag=PHA56_RS23910;product=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA;protein_id=WP_004098527.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5061341 5061718 . + . ID=gene-PHA56_RS23915;Name=apaG;gbkey=Gene;gene=apaG;gene_biotype=protein_coding;locus_tag=PHA56_RS23915;old_locus_tag=PHA56_23915 NZ_CP116214.1 Protein Homology CDS 5061341 5061718 . + 0 ID=cds-WP_004098526.1;Parent=gene-PHA56_RS23915;Dbxref=Genbank:WP_004098526.1;Name=WP_004098526.1;gbkey=CDS;gene=apaG;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225059.1;locus_tag=PHA56_RS23915;product=Co2+/Mg2+ efflux protein ApaG;protein_id=WP_004098526.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5061722 5062570 . + . ID=gene-PHA56_RS23920;Name=apaH;gbkey=Gene;gene=apaH;gene_biotype=protein_coding;locus_tag=PHA56_RS23920;old_locus_tag=PHA56_23920 NZ_CP116214.1 Protein Homology CDS 5061722 5062570 . + 0 ID=cds-WP_014227890.1;Parent=gene-PHA56_RS23920;Dbxref=Genbank:WP_014227890.1;Name=WP_014227890.1;Ontology_term=GO:0006139,GO:0008803;gbkey=CDS;gene=apaH;go_function=bis(5'-nucleosyl)-tetraphosphatase (symmetrical) activity|0008803||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225058.1;locus_tag=PHA56_RS23920;product=bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH;protein_id=WP_014227890.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5062611 5063090 . - . ID=gene-PHA56_RS23925;Name=folA;gbkey=Gene;gene=folA;gene_biotype=protein_coding;locus_tag=PHA56_RS23925;old_locus_tag=PHA56_23925 NZ_CP116214.1 Protein Homology CDS 5062611 5063090 . - 0 ID=cds-WP_004098524.1;Parent=gene-PHA56_RS23925;Dbxref=Genbank:WP_004098524.1;Name=WP_004098524.1;Ontology_term=GO:0046654,GO:0004146;gbkey=CDS;gene=folA;go_function=dihydrofolate reductase activity|0004146||IEA;go_process=tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020456510.1;locus_tag=PHA56_RS23925;product=type 3 dihydrofolate reductase;protein_id=WP_004098524.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5063288 5065153 . - . ID=gene-PHA56_RS23930;Name=kefC;gbkey=Gene;gene=kefC;gene_biotype=protein_coding;locus_tag=PHA56_RS23930;old_locus_tag=PHA56_23930 NZ_CP116214.1 Protein Homology CDS 5063288 5065153 . - 0 ID=cds-WP_014227889.1;Parent=gene-PHA56_RS23930;Dbxref=Genbank:WP_014227889.1;Name=WP_014227889.1;Ontology_term=GO:0006813,GO:0015503;gbkey=CDS;gene=kefC;go_function=glutathione-regulated potassium exporter activity|0015503||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225056.1;locus_tag=PHA56_RS23930;product=glutathione-regulated potassium-efflux system protein KefC;protein_id=WP_014227889.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5065146 5065679 . - . ID=gene-PHA56_RS23935;Name=kefF;gbkey=Gene;gene=kefF;gene_biotype=protein_coding;locus_tag=PHA56_RS23935;old_locus_tag=PHA56_23935 NZ_CP116214.1 Protein Homology CDS 5065146 5065679 . - 0 ID=cds-WP_004098522.1;Parent=gene-PHA56_RS23935;Dbxref=Genbank:WP_004098522.1;Name=WP_004098522.1;Ontology_term=GO:0006813;gbkey=CDS;gene=kefF;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225055.1;locus_tag=PHA56_RS23935;product=glutathione-regulated potassium-efflux system oxidoreductase KefF;protein_id=WP_004098522.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5065829 5066062 . - . ID=gene-PHA56_RS23940;Name=PHA56_RS23940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS23940;old_locus_tag=PHA56_23940 NZ_CP116214.1 Protein Homology CDS 5065829 5066062 . - 0 ID=cds-WP_014227888.1;Parent=gene-PHA56_RS23940;Dbxref=Genbank:WP_014227888.1;Name=WP_014227888.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007864168.1;locus_tag=PHA56_RS23940;product=YgdI/YgdR family lipoprotein;protein_id=WP_014227888.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5066450 5069674 . - . ID=gene-PHA56_RS23945;Name=carB;gbkey=Gene;gene=carB;gene_biotype=protein_coding;locus_tag=PHA56_RS23945;old_locus_tag=PHA56_23945 NZ_CP116214.1 Protein Homology CDS 5066450 5069674 . - 0 ID=cds-WP_014837385.1;Parent=gene-PHA56_RS23945;Dbxref=Genbank:WP_014837385.1;Name=WP_014837385.1;Ontology_term=GO:0006807,GO:0005524,GO:0046872;gbkey=CDS;gene=carB;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=nitrogen compound metabolic process|0006807||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225053.1;locus_tag=PHA56_RS23945;product=carbamoyl-phosphate synthase large subunit;protein_id=WP_014837385.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5069833 5070981 . - . ID=gene-PHA56_RS23950;Name=carA;gbkey=Gene;gene=carA;gene_biotype=protein_coding;locus_tag=PHA56_RS23950;old_locus_tag=PHA56_23950 NZ_CP116214.1 Protein Homology CDS 5069833 5070981 . - 0 ID=cds-WP_038424063.1;Parent=gene-PHA56_RS23950;Dbxref=Genbank:WP_038424063.1;Name=WP_038424063.1;Ontology_term=GO:0009220,GO:0004088,GO:0005951;gbkey=CDS;gene=carA;go_component=carbamoyl-phosphate synthase complex|0005951||IEA;go_function=carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity|0004088||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225052.1;locus_tag=PHA56_RS23950;product=glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit;protein_id=WP_038424063.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5071439 5072260 . - . ID=gene-PHA56_RS23955;Name=dapB;gbkey=Gene;gene=dapB;gene_biotype=protein_coding;locus_tag=PHA56_RS23955;old_locus_tag=PHA56_23955 NZ_CP116214.1 Protein Homology CDS 5071439 5072260 . - 0 ID=cds-WP_004098517.1;Parent=gene-PHA56_RS23955;Dbxref=Genbank:WP_004098517.1;Name=WP_004098517.1;Ontology_term=GO:0009089,GO:0008839;gbkey=CDS;gene=dapB;go_function=4-hydroxy-tetrahydrodipicolinate reductase|0008839||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225049.1;locus_tag=PHA56_RS23955;product=4-hydroxy-tetrahydrodipicolinate reductase;protein_id=WP_004098517.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5072506 5073414 . - . ID=gene-PHA56_RS23960;Name=citG;gbkey=Gene;gene=citG;gene_biotype=protein_coding;locus_tag=PHA56_RS23960;old_locus_tag=PHA56_23960 NZ_CP116214.1 Protein Homology CDS 5072506 5073414 . - 0 ID=cds-WP_014227884.1;Parent=gene-PHA56_RS23960;Dbxref=Genbank:WP_014227884.1;Name=WP_014227884.1;Ontology_term=GO:0019361,GO:0046917;gbkey=CDS;gene=citG;go_function=triphosphoribosyl-dephospho-CoA synthase activity|0046917||IEA;go_process=2'-(5''-triphosphoribosyl)-3'-dephospho-CoA biosynthetic process|0019361||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004098516.1;locus_tag=PHA56_RS23960;product=triphosphoribosyl-dephospho-CoA synthase CitG;protein_id=WP_014227884.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5073434 5074960 . - . ID=gene-PHA56_RS23965;Name=citF;gbkey=Gene;gene=citF;gene_biotype=protein_coding;locus_tag=PHA56_RS23965;old_locus_tag=PHA56_23965 NZ_CP116214.1 Protein Homology CDS 5073434 5074960 . - 0 ID=cds-WP_014227883.1;Parent=gene-PHA56_RS23965;Dbxref=Genbank:WP_014227883.1;Name=WP_014227883.1;Ontology_term=GO:0006113,GO:0008814,GO:0008815,GO:0009346;gbkey=CDS;gene=citF;go_component=ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate CoA-transferase activity|0008814||IEA,citrate (pro-3S)-lyase activity|0008815||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009654627.1;locus_tag=PHA56_RS23965;product=citrate lyase subunit alpha;protein_id=WP_014227883.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5074971 5075840 . - . ID=gene-PHA56_RS23970;Name=citE;gbkey=Gene;gene=citE;gene_biotype=protein_coding;locus_tag=PHA56_RS23970;old_locus_tag=PHA56_23970 NZ_CP116214.1 Protein Homology CDS 5074971 5075840 . - 0 ID=cds-WP_014227882.1;Parent=gene-PHA56_RS23970;Dbxref=Genbank:WP_014227882.1;Name=WP_014227882.1;Ontology_term=GO:0006113,GO:0008815,GO:0009346;gbkey=CDS;gene=citE;go_component=ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate (pro-3S)-lyase activity|0008815||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225046.1;locus_tag=PHA56_RS23970;product=citrate (pro-3S)-lyase subunit beta;protein_id=WP_014227882.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5075837 5076130 . - . ID=gene-PHA56_RS23975;Name=citD;gbkey=Gene;gene=citD;gene_biotype=protein_coding;locus_tag=PHA56_RS23975;old_locus_tag=PHA56_23975 NZ_CP116214.1 Protein Homology CDS 5075837 5076130 . - 0 ID=cds-WP_014227881.1;Parent=gene-PHA56_RS23975;Dbxref=Genbank:WP_014227881.1;Name=WP_014227881.1;Ontology_term=GO:0006113,GO:0008815,GO:0009346;gbkey=CDS;gene=citD;go_component=ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate (pro-3S)-lyase activity|0008815||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225045.1;locus_tag=PHA56_RS23975;product=citrate lyase acyl carrier protein;protein_id=WP_014227881.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5076160 5077188 . - . ID=gene-PHA56_RS23980;Name=citC;gbkey=Gene;gene=citC;gene_biotype=protein_coding;locus_tag=PHA56_RS23980;old_locus_tag=PHA56_23980 NZ_CP116214.1 Protein Homology CDS 5076160 5077188 . - 0 ID=cds-WP_025106466.1;Parent=gene-PHA56_RS23980;Dbxref=Genbank:WP_025106466.1;Name=WP_025106466.1;Ontology_term=GO:0006101,GO:0008771;gbkey=CDS;gene=citC;go_function=[citrate (pro-3S)-lyase] ligase activity|0008771||IEA;go_process=citrate metabolic process|0006101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225044.1;locus_tag=PHA56_RS23980;product=[citrate (pro-3S)-lyase] ligase;protein_id=WP_025106466.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5077594 5078934 . + . ID=gene-PHA56_RS23985;Name=citS;gbkey=Gene;gene=citS;gene_biotype=protein_coding;locus_tag=PHA56_RS23985;old_locus_tag=PHA56_23985 NZ_CP116214.1 Protein Homology CDS 5077594 5078934 . + 0 ID=cds-WP_014837380.1;Parent=gene-PHA56_RS23985;Dbxref=Genbank:WP_014837380.1;Name=WP_014837380.1;gbkey=CDS;gene=citS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225043.1;locus_tag=PHA56_RS23985;product=citrate/sodium symporter CitS;protein_id=WP_014837380.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5079095 5079343 . + . ID=gene-PHA56_RS23990;Name=PHA56_RS23990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS23990;old_locus_tag=PHA56_23990 NZ_CP116214.1 Protein Homology CDS 5079095 5079343 . + 0 ID=cds-WP_014837379.1;Parent=gene-PHA56_RS23990;Dbxref=Genbank:WP_014837379.1;Name=WP_014837379.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459746.1;locus_tag=PHA56_RS23990;product=oxaloacetate decarboxylase subunit gamma;protein_id=WP_014837379.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5079359 5081128 . + . ID=gene-PHA56_RS23995;Name=oadA;gbkey=Gene;gene=oadA;gene_biotype=protein_coding;locus_tag=PHA56_RS23995;old_locus_tag=PHA56_23995 NZ_CP116214.1 Protein Homology CDS 5079359 5081128 . + 0 ID=cds-WP_014837378.1;Parent=gene-PHA56_RS23995;Dbxref=Genbank:WP_014837378.1;Name=WP_014837378.1;Ontology_term=GO:0006814,GO:0008948,GO:0015081;gbkey=CDS;gene=oadA;go_function=oxaloacetate decarboxylase activity|0008948||IEA,sodium ion transmembrane transporter activity|0015081||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225041.1;locus_tag=PHA56_RS23995;product=sodium-extruding oxaloacetate decarboxylase subunit alpha;protein_id=WP_014837378.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5081144 5082445 . + . ID=gene-PHA56_RS24000;Name=PHA56_RS24000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS24000;old_locus_tag=PHA56_24000 NZ_CP116214.1 Protein Homology CDS 5081144 5082445 . + 0 ID=cds-WP_014839646.1;Parent=gene-PHA56_RS24000;Dbxref=Genbank:WP_014839646.1;Name=WP_014839646.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225040.1;locus_tag=PHA56_RS24000;product=oxaloacetate decarboxylase subunit beta;protein_id=WP_014839646.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5082675 5084303 . + . ID=gene-PHA56_RS24005;Name=PHA56_RS24005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS24005;old_locus_tag=PHA56_24005 NZ_CP116214.1 Protein Homology CDS 5082675 5084303 . + 0 ID=cds-WP_014227876.1;Parent=gene-PHA56_RS24005;Dbxref=Genbank:WP_014227876.1;Name=WP_014227876.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016529045.1;locus_tag=PHA56_RS24005;product=sensor histidine kinase;protein_id=WP_014227876.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5084296 5084994 . + . ID=gene-PHA56_RS24010;Name=PHA56_RS24010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS24010;old_locus_tag=PHA56_24010 NZ_CP116214.1 Protein Homology CDS 5084296 5084994 . + 0 ID=cds-WP_004098499.1;Parent=gene-PHA56_RS24010;Dbxref=Genbank:WP_004098499.1;Name=WP_004098499.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004128800.1;locus_tag=PHA56_RS24010;product=response regulator;protein_id=WP_004098499.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5085040 5085669 . - . ID=gene-PHA56_RS24015;Name=PHA56_RS24015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS24015;old_locus_tag=PHA56_24015 NZ_CP116214.1 Protein Homology CDS 5085040 5085669 . - 0 ID=cds-WP_014227875.1;Parent=gene-PHA56_RS24015;Dbxref=Genbank:WP_014227875.1;Name=WP_014227875.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004128797.1;locus_tag=PHA56_RS24015;product=hypothetical protein;protein_id=WP_014227875.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5085762 5086706 . + . ID=gene-PHA56_RS24020;Name=PHA56_RS24020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS24020;old_locus_tag=PHA56_24020 NZ_CP116214.1 Protein Homology CDS 5085762 5086706 . + 0 ID=cds-WP_014837375.1;Parent=gene-PHA56_RS24020;Dbxref=Genbank:WP_014837375.1;Name=WP_014837375.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009654572.1;locus_tag=PHA56_RS24020;product=LysR family transcriptional regulator;protein_id=WP_014837375.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5086773 5089061 . - . ID=gene-PHA56_RS24025;Name=PHA56_RS24025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS24025;old_locus_tag=PHA56_24025 NZ_CP116214.1 Protein Homology CDS 5086773 5089061 . - 0 ID=cds-WP_014227873.1;Parent=gene-PHA56_RS24025;Dbxref=Genbank:WP_014227873.1;Name=WP_014227873.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004110487.1;locus_tag=PHA56_RS24025;product=hydratase;protein_id=WP_014227873.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5089131 5090390 . - . ID=gene-PHA56_RS24030;Name=PHA56_RS24030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS24030;old_locus_tag=PHA56_24030 NZ_CP116214.1 Protein Homology CDS 5089131 5090390 . - 0 ID=cds-WP_014837374.1;Parent=gene-PHA56_RS24030;Dbxref=Genbank:WP_014837374.1;Name=WP_014837374.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004098492.1;locus_tag=PHA56_RS24030;product=SLC13 family permease;protein_id=WP_014837374.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5090499 5091932 . - . ID=gene-PHA56_RS24035;Name=PHA56_RS24035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS24035;old_locus_tag=PHA56_24035 NZ_CP116214.1 Protein Homology CDS 5090499 5091932 . - 0 ID=cds-WP_038424061.1;Parent=gene-PHA56_RS24035;Dbxref=Genbank:WP_038424061.1;Name=WP_038424061.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004108306.1;locus_tag=PHA56_RS24035;product=anion permease;protein_id=WP_038424061.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5092041 5093096 . - . ID=gene-PHA56_RS24040;Name=PHA56_RS24040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS24040;old_locus_tag=PHA56_24040 NZ_CP116214.1 Protein Homology CDS 5092041 5093096 . - 0 ID=cds-WP_014837372.1;Parent=gene-PHA56_RS24040;Dbxref=Genbank:WP_014837372.1;Name=WP_014837372.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014837372.1;locus_tag=PHA56_RS24040;product=4-oxalomesaconate tautomerase;protein_id=WP_014837372.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5093377 5094315 . + . ID=gene-PHA56_RS24045;Name=PHA56_RS24045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS24045;old_locus_tag=PHA56_24045 NZ_CP116214.1 Protein Homology CDS 5093377 5094315 . + 0 ID=cds-WP_014227868.1;Parent=gene-PHA56_RS24045;Dbxref=Genbank:WP_014227868.1;Name=WP_014227868.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004098489.1;locus_tag=PHA56_RS24045;product=LysR family transcriptional regulator;protein_id=WP_014227868.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5094344 5095258 . - . ID=gene-PHA56_RS24050;Name=rihC;gbkey=Gene;gene=rihC;gene_biotype=protein_coding;locus_tag=PHA56_RS24050;old_locus_tag=PHA56_24050 NZ_CP116214.1 Protein Homology CDS 5094344 5095258 . - 0 ID=cds-WP_014837371.1;Parent=gene-PHA56_RS24050;Dbxref=Genbank:WP_014837371.1;Name=WP_014837371.1;Ontology_term=GO:0016799;gbkey=CDS;gene=rihC;go_function=hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225035.1;locus_tag=PHA56_RS24050;product=ribonucleoside hydrolase RihC;protein_id=WP_014837371.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5095324 5096274 . - . ID=gene-PHA56_RS24055;Name=ispH;gbkey=Gene;gene=ispH;gene_biotype=protein_coding;gene_synonym=lytB;locus_tag=PHA56_RS24055;old_locus_tag=PHA56_24055 NZ_CP116214.1 Protein Homology CDS 5095324 5096274 . - 0 ID=cds-WP_014227866.1;Parent=gene-PHA56_RS24055;Dbxref=Genbank:WP_014227866.1;Name=WP_014227866.1;Ontology_term=GO:0019288,GO:0050992,GO:0046872,GO:0051745;gbkey=CDS;gene=ispH;go_function=metal ion binding|0046872||IEA,4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity|0051745||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA,dimethylallyl diphosphate biosynthetic process|0050992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124087.1;locus_tag=PHA56_RS24055;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;protein_id=WP_014227866.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5096276 5096725 . - . ID=gene-PHA56_RS24060;Name=fkpB;gbkey=Gene;gene=fkpB;gene_biotype=protein_coding;locus_tag=PHA56_RS24060;old_locus_tag=PHA56_24060 NZ_CP116214.1 Protein Homology CDS 5096276 5096725 . - 0 ID=cds-WP_038424059.1;Parent=gene-PHA56_RS24060;Dbxref=Genbank:WP_038424059.1;Name=WP_038424059.1;Ontology_term=GO:0003755;gbkey=CDS;gene=fkpB;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225033.1;locus_tag=PHA56_RS24060;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_038424059.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5096777 5097277 . - . ID=gene-PHA56_RS24065;Name=lspA;gbkey=Gene;gene=lspA;gene_biotype=protein_coding;locus_tag=PHA56_RS24065;old_locus_tag=PHA56_24065 NZ_CP116214.1 Protein Homology CDS 5096777 5097277 . - 0 ID=cds-WP_004098485.1;Parent=gene-PHA56_RS24065;Dbxref=Genbank:WP_004098485.1;Name=WP_004098485.1;Ontology_term=GO:0006508,GO:0009306,GO:0004190,GO:0005886;gbkey=CDS;gene=lspA;go_component=plasma membrane|0005886||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=proteolysis|0006508||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459052.1;locus_tag=PHA56_RS24065;product=signal peptidase II;protein_id=WP_004098485.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5097277 5100093 . - . ID=gene-PHA56_RS24070;Name=ileS;gbkey=Gene;gene=ileS;gene_biotype=protein_coding;locus_tag=PHA56_RS24070;old_locus_tag=PHA56_24070 NZ_CP116214.1 Protein Homology CDS 5097277 5100093 . - 0 ID=cds-WP_038424943.1;Parent=gene-PHA56_RS24070;Dbxref=Genbank:WP_038424943.1;Name=WP_038424943.1;Ontology_term=GO:0006428,GO:0004822,GO:0005737;gbkey=CDS;gene=ileS;go_component=cytoplasm|0005737||IEA;go_function=isoleucine-tRNA ligase activity|0004822||IEA;go_process=isoleucyl-tRNA aminoacylation|0006428||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124083.1;locus_tag=PHA56_RS24070;product=isoleucine--tRNA ligase;protein_id=WP_038424943.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5100138 5101076 . - . ID=gene-PHA56_RS24075;Name=ribF;gbkey=Gene;gene=ribF;gene_biotype=protein_coding;locus_tag=PHA56_RS24075;old_locus_tag=PHA56_24075 NZ_CP116214.1 Protein Homology CDS 5100138 5101076 . - 0 ID=cds-WP_004098483.1;Parent=gene-PHA56_RS24075;Dbxref=Genbank:WP_004098483.1;Name=WP_004098483.1;Ontology_term=GO:0003919;gbkey=CDS;gene=ribF;go_function=FMN adenylyltransferase activity|0003919||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004204236.1;locus_tag=PHA56_RS24075;product=bifunctional riboflavin kinase/FAD synthetase;protein_id=WP_004098483.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5101407 5101670 . + . ID=gene-PHA56_RS24080;Name=rpsT;gbkey=Gene;gene=rpsT;gene_biotype=protein_coding;locus_tag=PHA56_RS24080;old_locus_tag=PHA56_24080 NZ_CP116214.1 Protein Homology CDS 5101407 5101670 . + 0 ID=cds-WP_003018940.1;Parent=gene-PHA56_RS24080;Dbxref=Genbank:WP_003018940.1;Name=WP_003018940.1;Ontology_term=GO:0006412,GO:0003735,GO:0000312,GO:0022627;gbkey=CDS;gene=rpsT;go_component=plastid small ribosomal subunit|0000312||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006117633.1;locus_tag=PHA56_RS24080;product=30S ribosomal protein S20;protein_id=WP_003018940.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5101837 5102736 . - . ID=gene-PHA56_RS24085;Name=nhaR;gbkey=Gene;gene=nhaR;gene_biotype=protein_coding;locus_tag=PHA56_RS24085;old_locus_tag=PHA56_24085 NZ_CP116214.1 Protein Homology CDS 5101837 5102736 . - 0 ID=cds-WP_014227863.1;Parent=gene-PHA56_RS24085;Dbxref=Genbank:WP_014227863.1;Name=WP_014227863.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=nhaR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004128775.1;locus_tag=PHA56_RS24085;product=transcriptional activator NhaR;protein_id=WP_014227863.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5102789 5103964 . - . ID=gene-PHA56_RS24090;Name=nhaA;gbkey=Gene;gene=nhaA;gene_biotype=protein_coding;locus_tag=PHA56_RS24090;old_locus_tag=PHA56_24090 NZ_CP116214.1 Protein Homology CDS 5102789 5103964 . - 0 ID=cds-WP_014227862.1;Parent=gene-PHA56_RS24090;Dbxref=Genbank:WP_014227862.1;Name=WP_014227862.1;Ontology_term=GO:0006814,GO:1902600,GO:0015385;gbkey=CDS;gene=nhaA;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014227862.1;locus_tag=PHA56_RS24090;product=Na+/H+ antiporter NhaA;protein_id=WP_014227862.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5104432 5105124 . - . ID=gene-PHA56_RS24095;Name=PHA56_RS24095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS24095;old_locus_tag=PHA56_24095 NZ_CP116214.1 Protein Homology CDS 5104432 5105124 . - 0 ID=cds-WP_032694608.1;Parent=gene-PHA56_RS24095;Dbxref=Genbank:WP_032694608.1;Name=WP_032694608.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015704343.1;locus_tag=PHA56_RS24095;product=winged helix-turn-helix transcriptional regulator;protein_id=WP_032694608.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5105452 5108511 . - . ID=gene-PHA56_RS24100;Name=PHA56_RS24100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS24100;old_locus_tag=PHA56_24100 NZ_CP116214.1 Protein Homology CDS 5105452 5108511 . - 0 ID=cds-WP_032694609.1;Parent=gene-PHA56_RS24100;Dbxref=Genbank:WP_032694609.1;Name=WP_032694609.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016810133.1;locus_tag=PHA56_RS24100;product=chitinase;protein_id=WP_032694609.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5108602 5110701 . - . ID=gene-PHA56_RS24105;Name=PHA56_RS24105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS24105;old_locus_tag=PHA56_24105 NZ_CP116214.1 Protein Homology CDS 5108602 5110701 . - 0 ID=cds-WP_042944266.1;Parent=gene-PHA56_RS24105;Dbxref=Genbank:WP_042944266.1;Name=WP_042944266.1;Ontology_term=GO:0005975;gbkey=CDS;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017145029.1;locus_tag=PHA56_RS24105;product=glycosyl hydrolase family 18 protein;protein_id=WP_042944266.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5111087 5111530 . + . ID=gene-PHA56_RS24110;Name=PHA56_RS24110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS24110;old_locus_tag=PHA56_24110 NZ_CP116214.1 Protein Homology CDS 5111087 5111530 . + 0 ID=cds-WP_014227858.1;Parent=gene-PHA56_RS24110;Dbxref=Genbank:WP_014227858.1;Name=WP_014227858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459022.1;locus_tag=PHA56_RS24110;product=transcriptional regulator;protein_id=WP_014227858.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5111547 5112080 . + . ID=gene-PHA56_RS24115;Name=PHA56_RS24115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS24115;old_locus_tag=PHA56_24115 NZ_CP116214.1 Protein Homology CDS 5111547 5112080 . + 0 ID=cds-WP_032719260.1;Parent=gene-PHA56_RS24115;Dbxref=Genbank:WP_032719260.1;Name=WP_032719260.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014227857.1;locus_tag=PHA56_RS24115;product=glycoside hydrolase family 108 protein;protein_id=WP_032719260.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5112158 5112505 . - . ID=gene-PHA56_RS24120;Name=PHA56_RS24120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS24120;old_locus_tag=PHA56_24120 NZ_CP116214.1 Protein Homology CDS 5112158 5112505 . - 0 ID=cds-WP_014227856.1;Parent=gene-PHA56_RS24120;Dbxref=Genbank:WP_014227856.1;Name=WP_014227856.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004108395.1;locus_tag=PHA56_RS24120;product=phage holin family protein;protein_id=WP_014227856.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5112630 5113577 . - . ID=gene-PHA56_RS24125;Name=PHA56_RS24125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS24125;old_locus_tag=PHA56_24125 NZ_CP116214.1 Protein Homology CDS 5112630 5113577 . - 0 ID=cds-WP_014227855.1;Parent=gene-PHA56_RS24125;Dbxref=Genbank:WP_014227855.1;Name=WP_014227855.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001538891.1;locus_tag=PHA56_RS24125;product=LysR family transcriptional regulator;protein_id=WP_014227855.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5113745 5114881 . - . ID=gene-PHA56_RS24130;Name=dnaJ;gbkey=Gene;gene=dnaJ;gene_biotype=protein_coding;locus_tag=PHA56_RS24130;old_locus_tag=PHA56_24130 NZ_CP116214.1 Protein Homology CDS 5113745 5114881 . - 0 ID=cds-WP_014837364.1;Parent=gene-PHA56_RS24130;Dbxref=Genbank:WP_014837364.1;Name=WP_014837364.1;Ontology_term=GO:0006457,GO:0009408,GO:0005515;gbkey=CDS;gene=dnaJ;go_function=protein binding|0005515||IEA;go_process=protein folding|0006457||IEA,response to heat|0009408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225025.1;locus_tag=PHA56_RS24130;product=molecular chaperone DnaJ;protein_id=WP_014837364.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5114969 5116885 . - . ID=gene-PHA56_RS24135;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;locus_tag=PHA56_RS24135;old_locus_tag=PHA56_24135 NZ_CP116214.1 Protein Homology CDS 5114969 5116885 . - 0 ID=cds-WP_004128758.1;Parent=gene-PHA56_RS24135;Dbxref=Genbank:WP_004128758.1;Name=WP_004128758.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887;gbkey=CDS;gene=dnaK;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001737966.1;locus_tag=PHA56_RS24135;product=molecular chaperone DnaK;protein_id=WP_004128758.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5117272 5117676 . + . ID=gene-PHA56_RS24140;Name=PHA56_RS24140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS24140;old_locus_tag=PHA56_24140 NZ_CP116214.1 Protein Homology CDS 5117272 5117676 . + 0 ID=cds-WP_014227853.1;Parent=gene-PHA56_RS24140;Dbxref=Genbank:WP_014227853.1;Name=WP_014227853.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225023.1;locus_tag=PHA56_RS24140;product=DUF2541 family protein;protein_id=WP_014227853.1;transl_table=11 NZ_CP116214.1 RefSeq pseudogene 5117704 5118452 . + . ID=gene-PHA56_RS24145;Name=msyB;gbkey=Gene;gene=msyB;gene_biotype=pseudogene;locus_tag=PHA56_RS24145;old_locus_tag=PHA56_24145;pseudo=true NZ_CP116214.1 Protein Homology CDS 5117704 5118452 . + 0 ID=cds-PHA56_RS24145;Parent=gene-PHA56_RS24145;Note=frameshifted;gbkey=CDS;gene=msyB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225022.1;locus_tag=PHA56_RS24145;product=acidic protein MsyB;pseudo=true;transl_table=11 NZ_CP116214.1 RefSeq gene 5118541 5119107 . + . ID=gene-PHA56_RS24150;Name=satP;gbkey=Gene;gene=satP;gene_biotype=protein_coding;locus_tag=PHA56_RS24150;old_locus_tag=PHA56_24150 NZ_CP116214.1 Protein Homology CDS 5118541 5119107 . + 0 ID=cds-WP_014227851.1;Parent=gene-PHA56_RS24150;Dbxref=Genbank:WP_014227851.1;Name=WP_014227851.1;Ontology_term=GO:0016020;gbkey=CDS;gene=satP;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459014.1;locus_tag=PHA56_RS24150;product=acetate uptake transporter;protein_id=WP_014227851.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5119154 5120464 . - . ID=gene-PHA56_RS24155;Name=PHA56_RS24155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS24155;old_locus_tag=PHA56_24155 NZ_CP116214.1 Protein Homology CDS 5119154 5120464 . - 0 ID=cds-WP_014837363.1;Parent=gene-PHA56_RS24155;Dbxref=Genbank:WP_014837363.1;Name=WP_014837363.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004098460.1;locus_tag=PHA56_RS24155;product=MFS transporter;protein_id=WP_014837363.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5120585 5121172 . - . ID=gene-PHA56_RS24160;Name=mog;gbkey=Gene;gene=mog;gene_biotype=protein_coding;locus_tag=PHA56_RS24160;old_locus_tag=PHA56_24160 NZ_CP116214.1 Protein Homology CDS 5120585 5121172 . - 0 ID=cds-WP_004098459.1;Parent=gene-PHA56_RS24160;Dbxref=Genbank:WP_004098459.1;Name=WP_004098459.1;Ontology_term=GO:0006777;gbkey=CDS;gene=mog;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225019.1;locus_tag=PHA56_RS24160;product=molybdopterin adenylyltransferase;protein_id=WP_004098459.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5121272 5122225 . - . ID=gene-PHA56_RS24165;Name=tal;gbkey=Gene;gene=tal;gene_biotype=protein_coding;locus_tag=PHA56_RS24165;old_locus_tag=PHA56_24165 NZ_CP116214.1 Protein Homology CDS 5121272 5122225 . - 0 ID=cds-WP_004098458.1;Parent=gene-PHA56_RS24165;Dbxref=Genbank:WP_004098458.1;Name=WP_004098458.1;Ontology_term=GO:0006098,GO:0004801;gbkey=CDS;gene=tal;go_function=transaldolase activity|0004801||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225018.1;locus_tag=PHA56_RS24165;product=transaldolase;protein_id=WP_004098458.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5122429 5123859 . + . ID=gene-PHA56_RS24170;Name=PHA56_RS24170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS24170;old_locus_tag=PHA56_24170 NZ_CP116214.1 Protein Homology CDS 5122429 5123859 . + 0 ID=cds-WP_032692978.1;Parent=gene-PHA56_RS24170;Dbxref=Genbank:WP_032692978.1;Name=WP_032692978.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225017.1;locus_tag=PHA56_RS24170;product=sodium:alanine symporter family protein;protein_id=WP_032692978.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5123937 5124710 . + . ID=gene-PHA56_RS24175;Name=yaaA;gbkey=Gene;gene=yaaA;gene_biotype=protein_coding;locus_tag=PHA56_RS24175;old_locus_tag=PHA56_24175 NZ_CP116214.1 Protein Homology CDS 5123937 5124710 . + 0 ID=cds-WP_004098454.1;Parent=gene-PHA56_RS24175;Dbxref=Genbank:WP_004098454.1;Name=WP_004098454.1;gbkey=CDS;gene=yaaA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225016.1;locus_tag=PHA56_RS24175;product=peroxide stress protein YaaA;protein_id=WP_004098454.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5124762 5126042 . - . ID=gene-PHA56_RS24180;Name=thrC;gbkey=Gene;gene=thrC;gene_biotype=protein_coding;locus_tag=PHA56_RS24180;old_locus_tag=PHA56_24180 NZ_CP116214.1 Protein Homology CDS 5124762 5126042 . - 0 ID=cds-WP_038424054.1;Parent=gene-PHA56_RS24180;Dbxref=Genbank:WP_038424054.1;Name=WP_038424054.1;Ontology_term=GO:0009088,GO:0004795;gbkey=CDS;gene=thrC;go_function=threonine synthase activity|0004795||IEA;go_process=threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225014.1;locus_tag=PHA56_RS24180;product=threonine synthase;protein_id=WP_038424054.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5126046 5126975 . - . ID=gene-PHA56_RS24185;Name=thrB;gbkey=Gene;gene=thrB;gene_biotype=protein_coding;locus_tag=PHA56_RS24185;old_locus_tag=PHA56_24185 NZ_CP116214.1 Protein Homology CDS 5126046 5126975 . - 0 ID=cds-WP_038424053.1;Parent=gene-PHA56_RS24185;Dbxref=Genbank:WP_038424053.1;Name=WP_038424053.1;Ontology_term=GO:0009088,GO:0004413;gbkey=CDS;gene=thrB;go_function=homoserine kinase activity|0004413||IEA;go_process=threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225013.1;locus_tag=PHA56_RS24185;product=homoserine kinase;protein_id=WP_038424053.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5126977 5129439 . - . ID=gene-PHA56_RS24190;Name=thrA;gbkey=Gene;gene=thrA;gene_biotype=protein_coding;locus_tag=PHA56_RS24190;old_locus_tag=PHA56_24190 NZ_CP116214.1 Protein Homology CDS 5126977 5129439 . - 0 ID=cds-WP_032692979.1;Parent=gene-PHA56_RS24190;Dbxref=Genbank:WP_032692979.1;Name=WP_032692979.1;Ontology_term=GO:0008652,GO:0009067,GO:0004072,GO:0004412,GO:0050661;gbkey=CDS;gene=thrA;go_function=aspartate kinase activity|0004072||IEA,homoserine dehydrogenase activity|0004412||IEA,NADP binding|0050661||IEA;go_process=amino acid biosynthetic process|0008652||IEA,aspartate family amino acid biosynthetic process|0009067||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124053.1;locus_tag=PHA56_RS24190;product=bifunctional aspartate kinase/homoserine dehydrogenase I;protein_id=WP_032692979.1;transl_table=11 NZ_CP116214.1 cmsearch sequence_feature 5129465 5129582 . - . ID=id-NZ_CP116214.1:5129465..5129582;Dbxref=RFAM:RF00506;Note=Thr leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.1 NZ_CP116214.1 RefSeq gene 5129521 5129589 . - . ID=gene-PHA56_RS24195;Name=thrL;gbkey=Gene;gene=thrL;gene_biotype=protein_coding;locus_tag=PHA56_RS24195;old_locus_tag=PHA56_24195 NZ_CP116214.1 Protein Homology CDS 5129521 5129589 . - 0 ID=cds-WP_004222578.1;Parent=gene-PHA56_RS24195;Dbxref=Genbank:WP_004222578.1;Name=WP_004222578.1;Ontology_term=GO:0031554,GO:0031556;gbkey=CDS;gene=thrL;go_process=regulation of termination of DNA-templated transcription|0031554||IEA,transcriptional attenuation by ribosome|0031556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004222578.1;locus_tag=PHA56_RS24195;product=thr operon leader peptide;protein_id=WP_004222578.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5129802 5130488 . - . ID=gene-PHA56_RS24200;Name=PHA56_RS24200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS24200;old_locus_tag=PHA56_24200 NZ_CP116214.1 Protein Homology CDS 5129802 5130488 . - 0 ID=cds-WP_032692980.1;Parent=gene-PHA56_RS24200;Dbxref=Genbank:WP_032692980.1;Name=WP_032692980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009653675.1;locus_tag=PHA56_RS24200;product=tRNA/rRNA methyltransferase;protein_id=WP_032692980.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5130886 5131026 . - . ID=gene-PHA56_RS24205;Name=yjjY;gbkey=Gene;gene=yjjY;gene_biotype=protein_coding;locus_tag=PHA56_RS24205;old_locus_tag=PHA56_24205 NZ_CP116214.1 Protein Homology CDS 5130886 5131026 . - 0 ID=cds-WP_001541509.1;Parent=gene-PHA56_RS24205;Dbxref=Genbank:WP_001541509.1;Name=WP_001541509.1;gbkey=CDS;gene=yjjY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463455.1;locus_tag=PHA56_RS24205;product=protein YjjY;protein_id=WP_001541509.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5131122 5131838 . + . ID=gene-PHA56_RS24210;Name=arcA;gbkey=Gene;gene=arcA;gene_biotype=protein_coding;locus_tag=PHA56_RS24210;old_locus_tag=PHA56_24210 NZ_CP116214.1 Protein Homology CDS 5131122 5131838 . + 0 ID=cds-WP_002887843.1;Parent=gene-PHA56_RS24210;Dbxref=Genbank:WP_002887843.1;Name=WP_002887843.1;gbkey=CDS;gene=arcA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003621071.1;locus_tag=PHA56_RS24210;product=two-component system response regulator ArcA;protein_id=WP_002887843.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5131892 5133250 . - . ID=gene-PHA56_RS24215;Name=creD;gbkey=Gene;gene=creD;gene_biotype=protein_coding;locus_tag=PHA56_RS24215;old_locus_tag=PHA56_24215 NZ_CP116214.1 Protein Homology CDS 5131892 5133250 . - 0 ID=cds-WP_032692981.1;Parent=gene-PHA56_RS24215;Dbxref=Genbank:WP_032692981.1;Name=WP_032692981.1;gbkey=CDS;gene=creD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014837359.1;locus_tag=PHA56_RS24215;product=cell envelope integrity protein CreD;protein_id=WP_032692981.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5133308 5134732 . - . ID=gene-PHA56_RS24220;Name=creC;gbkey=Gene;gene=creC;gene_biotype=protein_coding;locus_tag=PHA56_RS24220;old_locus_tag=PHA56_24220 NZ_CP116214.1 Protein Homology CDS 5133308 5134732 . - 0 ID=cds-WP_014227844.1;Parent=gene-PHA56_RS24220;Dbxref=Genbank:WP_014227844.1;Name=WP_014227844.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=creC;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225007.1;locus_tag=PHA56_RS24220;product=two-component system sensor histidine kinase CreC;protein_id=WP_014227844.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5134732 5135421 . - . ID=gene-PHA56_RS24225;Name=creB;gbkey=Gene;gene=creB;gene_biotype=protein_coding;locus_tag=PHA56_RS24225;old_locus_tag=PHA56_24225 NZ_CP116214.1 Protein Homology CDS 5134732 5135421 . - 0 ID=cds-WP_038424052.1;Parent=gene-PHA56_RS24225;Dbxref=Genbank:WP_038424052.1;Name=WP_038424052.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=creB;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014227843.1;locus_tag=PHA56_RS24225;product=two-component system response regulator CreB;protein_id=WP_038424052.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5135434 5135907 . - . ID=gene-PHA56_RS24230;Name=creA;gbkey=Gene;gene=creA;gene_biotype=protein_coding;locus_tag=PHA56_RS24230;old_locus_tag=PHA56_24230 NZ_CP116214.1 Protein Homology CDS 5135434 5135907 . - 0 ID=cds-WP_004098425.1;Parent=gene-PHA56_RS24230;Dbxref=Genbank:WP_004098425.1;Name=WP_004098425.1;gbkey=CDS;gene=creA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225005.1;locus_tag=PHA56_RS24230;product=protein CreA;protein_id=WP_004098425.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5136117 5136986 . + . ID=gene-PHA56_RS24235;Name=robA;gbkey=Gene;gene=robA;gene_biotype=protein_coding;locus_tag=PHA56_RS24235;old_locus_tag=PHA56_24235 NZ_CP116214.1 Protein Homology CDS 5136117 5136986 . + 0 ID=cds-WP_014227841.1;Parent=gene-PHA56_RS24235;Dbxref=Genbank:WP_014227841.1;Name=WP_014227841.1;gbkey=CDS;gene=robA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225004.1;locus_tag=PHA56_RS24235;product=MDR efflux pump AcrAB transcriptional activator RobA;protein_id=WP_014227841.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5136983 5137630 . - . ID=gene-PHA56_RS24240;Name=gpmB;gbkey=Gene;gene=gpmB;gene_biotype=protein_coding;locus_tag=PHA56_RS24240;old_locus_tag=PHA56_24240 NZ_CP116214.1 Protein Homology CDS 5136983 5137630 . - 0 ID=cds-WP_014227840.1;Parent=gene-PHA56_RS24240;Dbxref=Genbank:WP_014227840.1;Name=WP_014227840.1;Ontology_term=GO:0006096,GO:0004619;gbkey=CDS;gene=gpmB;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225003.1;locus_tag=PHA56_RS24240;product=2%2C3-diphosphoglycerate-dependent phosphoglycerate mutase GpmB;protein_id=WP_014227840.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5137745 5138260 . + . ID=gene-PHA56_RS24245;Name=yjjX;gbkey=Gene;gene=yjjX;gene_biotype=protein_coding;locus_tag=PHA56_RS24245;old_locus_tag=PHA56_24245 NZ_CP116214.1 Protein Homology CDS 5137745 5138260 . + 0 ID=cds-WP_014227839.1;Parent=gene-PHA56_RS24245;Dbxref=Genbank:WP_014227839.1;Name=WP_014227839.1;gbkey=CDS;gene=yjjX;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225002.1;locus_tag=PHA56_RS24245;product=inosine/xanthosine triphosphatase;protein_id=WP_014227839.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5138247 5138579 . - . ID=gene-PHA56_RS24250;Name=trpR;gbkey=Gene;gene=trpR;gene_biotype=protein_coding;locus_tag=PHA56_RS24250;old_locus_tag=PHA56_24250 NZ_CP116214.1 Protein Homology CDS 5138247 5138579 . - 0 ID=cds-WP_004098417.1;Parent=gene-PHA56_RS24250;Dbxref=Genbank:WP_004098417.1;Name=WP_004098417.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=trpR;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225001.1;locus_tag=PHA56_RS24250;product=trp operon repressor;protein_id=WP_004098417.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5138697 5140634 . - . ID=gene-PHA56_RS24255;Name=sltY;gbkey=Gene;gene=sltY;gene_biotype=protein_coding;locus_tag=PHA56_RS24255;old_locus_tag=PHA56_24255 NZ_CP116214.1 Protein Homology CDS 5138697 5140634 . - 0 ID=cds-WP_014227838.1;Parent=gene-PHA56_RS24255;Dbxref=Genbank:WP_014227838.1;Name=WP_014227838.1;Ontology_term=GO:0000270,GO:0004553,GO:0008933,GO:0016020,GO:0042597;gbkey=CDS;gene=sltY;go_component=membrane|0016020||IEA,periplasmic space|0042597||IEA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225000.1;locus_tag=PHA56_RS24255;product=murein transglycosylase;protein_id=WP_014227838.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5140908 5142575 . + . ID=gene-PHA56_RS24260;Name=ettA;gbkey=Gene;gene=ettA;gene_biotype=protein_coding;locus_tag=PHA56_RS24260;old_locus_tag=PHA56_24260 NZ_CP116214.1 Protein Homology CDS 5140908 5142575 . + 0 ID=cds-WP_038424942.1;Parent=gene-PHA56_RS24260;Dbxref=Genbank:WP_038424942.1;Name=WP_038424942.1;Ontology_term=GO:0045900,GO:0005524;gbkey=CDS;gene=ettA;go_function=ATP binding|0005524||IEA;go_process=negative regulation of translational elongation|0045900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017145039.1;locus_tag=PHA56_RS24260;product=energy-dependent translational throttle protein EttA;protein_id=WP_038424942.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5142684 5143916 . - . ID=gene-PHA56_RS24265;Name=nadR;gbkey=Gene;gene=nadR;gene_biotype=protein_coding;locus_tag=PHA56_RS24265;old_locus_tag=PHA56_24265 NZ_CP116214.1 Protein Homology CDS 5142684 5143916 . - 0 ID=cds-WP_004098414.1;Parent=gene-PHA56_RS24265;Dbxref=Genbank:WP_004098414.1;Name=WP_004098414.1;Ontology_term=GO:0009058,GO:0000309,GO:0003677,GO:0050262;gbkey=CDS;gene=nadR;go_function=nicotinamide-nucleotide adenylyltransferase activity|0000309||IEA,DNA binding|0003677||IEA,ribosylnicotinamide kinase activity|0050262||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224998.1;locus_tag=PHA56_RS24265;product=multifunctional transcriptional regulator/nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase NadR;protein_id=WP_004098414.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5143938 5145320 . - . ID=gene-PHA56_RS24270;Name=radA;gbkey=Gene;gene=radA;gene_biotype=protein_coding;locus_tag=PHA56_RS24270;old_locus_tag=PHA56_24270 NZ_CP116214.1 Protein Homology CDS 5143938 5145320 . - 0 ID=cds-WP_004098408.1;Parent=gene-PHA56_RS24270;Dbxref=Genbank:WP_004098408.1;Name=WP_004098408.1;Ontology_term=GO:0006281,GO:0005524;gbkey=CDS;gene=radA;go_function=ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001399683.1;locus_tag=PHA56_RS24270;product=DNA repair protein RadA;protein_id=WP_004098408.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5145330 5146301 . - . ID=gene-PHA56_RS24275;Name=serB;gbkey=Gene;gene=serB;gene_biotype=protein_coding;locus_tag=PHA56_RS24275;old_locus_tag=PHA56_24275 NZ_CP116214.1 Protein Homology CDS 5145330 5146301 . - 0 ID=cds-WP_014227836.1;Parent=gene-PHA56_RS24275;Dbxref=Genbank:WP_014227836.1;Name=WP_014227836.1;Ontology_term=GO:0006564,GO:0036424;gbkey=CDS;gene=serB;go_function=L-phosphoserine phosphatase activity|0036424||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224996.1;locus_tag=PHA56_RS24275;product=phosphoserine phosphatase;protein_id=WP_014227836.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5146406 5147047 . + . ID=gene-PHA56_RS24280;Name=PHA56_RS24280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS24280;old_locus_tag=PHA56_24280 NZ_CP116214.1 Protein Homology CDS 5146406 5147047 . + 0 ID=cds-WP_014227835.1;Parent=gene-PHA56_RS24280;Dbxref=Genbank:WP_014227835.1;Name=WP_014227835.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004128710.1;locus_tag=PHA56_RS24280;product=YtjB family periplasmic protein;protein_id=WP_014227835.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5147058 5148074 . + . ID=gene-PHA56_RS24285;Name=lplA;gbkey=Gene;gene=lplA;gene_biotype=protein_coding;locus_tag=PHA56_RS24285;old_locus_tag=PHA56_24285 NZ_CP116214.1 Protein Homology CDS 5147058 5148074 . + 0 ID=cds-WP_038424941.1;Parent=gene-PHA56_RS24285;Dbxref=Genbank:WP_038424941.1;Name=WP_038424941.1;gbkey=CDS;gene=lplA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418803.1;locus_tag=PHA56_RS24285;product=lipoate--protein ligase LplA;protein_id=WP_038424941.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5148124 5148846 . - . ID=gene-PHA56_RS24290;Name=deoD;gbkey=Gene;gene=deoD;gene_biotype=protein_coding;locus_tag=PHA56_RS24290;old_locus_tag=PHA56_24290 NZ_CP116214.1 Protein Homology CDS 5148124 5148846 . - 0 ID=cds-WP_004098401.1;Parent=gene-PHA56_RS24290;Dbxref=Genbank:WP_004098401.1;Name=WP_004098401.1;Ontology_term=GO:0043096,GO:0004731;gbkey=CDS;gene=deoD;go_function=purine-nucleoside phosphorylase activity|0004731||IEA;go_process=purine nucleobase salvage|0043096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224993.1;locus_tag=PHA56_RS24290;product=purine-nucleoside phosphorylase;protein_id=WP_004098401.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5148940 5150163 . - . ID=gene-PHA56_RS24295;Name=deoB;gbkey=Gene;gene=deoB;gene_biotype=protein_coding;locus_tag=PHA56_RS24295;old_locus_tag=PHA56_24295 NZ_CP116214.1 Protein Homology CDS 5148940 5150163 . - 0 ID=cds-WP_014837353.1;Parent=gene-PHA56_RS24295;Dbxref=Genbank:WP_014837353.1;Name=WP_014837353.1;Ontology_term=GO:0006139,GO:0008973;gbkey=CDS;gene=deoB;go_function=phosphopentomutase activity|0008973||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463425.1;locus_tag=PHA56_RS24295;product=phosphopentomutase;protein_id=WP_014837353.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5150216 5151538 . - . ID=gene-PHA56_RS24300;Name=deoA;gbkey=Gene;gene=deoA;gene_biotype=protein_coding;locus_tag=PHA56_RS24300;old_locus_tag=PHA56_24300 NZ_CP116214.1 Protein Homology CDS 5150216 5151538 . - 0 ID=cds-WP_014227832.1;Parent=gene-PHA56_RS24300;Dbxref=Genbank:WP_014227832.1;Name=WP_014227832.1;Ontology_term=GO:0006139,GO:0009032;gbkey=CDS;gene=deoA;go_function=thymidine phosphorylase activity|0009032||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224991.1;locus_tag=PHA56_RS24300;product=thymidine phosphorylase;protein_id=WP_014227832.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5151617 5152396 . - . ID=gene-PHA56_RS24305;Name=deoC;gbkey=Gene;gene=deoC;gene_biotype=protein_coding;locus_tag=PHA56_RS24305;old_locus_tag=PHA56_24305 NZ_CP116214.1 Protein Homology CDS 5151617 5152396 . - 0 ID=cds-WP_014837351.1;Parent=gene-PHA56_RS24305;Dbxref=Genbank:WP_014837351.1;Name=WP_014837351.1;Ontology_term=GO:0009264,GO:0004139;gbkey=CDS;gene=deoC;go_function=deoxyribose-phosphate aldolase activity|0004139||IEA;go_process=deoxyribonucleotide catabolic process|0009264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005097947.1;locus_tag=PHA56_RS24305;product=deoxyribose-phosphate aldolase;protein_id=WP_014837351.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5152813 5154090 . - . ID=gene-PHA56_RS24310;Name=PHA56_RS24310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS24310;old_locus_tag=PHA56_24310 NZ_CP116214.1 Protein Homology CDS 5152813 5154090 . - 0 ID=cds-WP_004098395.1;Parent=gene-PHA56_RS24310;Dbxref=Genbank:WP_004098395.1;Name=WP_004098395.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224989.1;locus_tag=PHA56_RS24310;product=NupC/NupG family nucleoside CNT transporter;protein_id=WP_004098395.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5154237 5155016 . - . ID=gene-PHA56_RS24315;Name=PHA56_RS24315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS24315;old_locus_tag=PHA56_24315 NZ_CP116214.1 Protein Homology CDS 5154237 5155016 . - 0 ID=cds-WP_038424051.1;Parent=gene-PHA56_RS24315;Dbxref=Genbank:WP_038424051.1;Name=WP_038424051.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026291.2;locus_tag=PHA56_RS24315;product=metal-dependent hydrolase;protein_id=WP_038424051.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5155013 5156086 . - . ID=gene-PHA56_RS24320;Name=PHA56_RS24320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS24320;old_locus_tag=PHA56_24320 NZ_CP116214.1 Protein Homology CDS 5155013 5156086 . - 0 ID=cds-WP_004128693.1;Parent=gene-PHA56_RS24320;Dbxref=Genbank:WP_004128693.1;Name=WP_004128693.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224987.1;locus_tag=PHA56_RS24320;product=patatin family protein;protein_id=WP_004128693.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5156207 5156368 . - . ID=gene-PHA56_RS24325;Name=PHA56_RS24325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS24325;old_locus_tag=PHA56_24325 NZ_CP116214.1 Protein Homology CDS 5156207 5156368 . - 0 ID=cds-WP_003856556.1;Parent=gene-PHA56_RS24325;Dbxref=Genbank:WP_003856556.1;Name=WP_003856556.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002887716.1;locus_tag=PHA56_RS24325;product=DUF1328 domain-containing protein;protein_id=WP_003856556.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5156493 5157104 . - . ID=gene-PHA56_RS24330;Name=osmY;gbkey=Gene;gene=osmY;gene_biotype=protein_coding;locus_tag=PHA56_RS24330;old_locus_tag=PHA56_24330 NZ_CP116214.1 Protein Homology CDS 5156493 5157104 . - 0 ID=cds-WP_014227828.1;Parent=gene-PHA56_RS24330;Dbxref=Genbank:WP_014227828.1;Name=WP_014227828.1;gbkey=CDS;gene=osmY;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224985.1;locus_tag=PHA56_RS24330;product=molecular chaperone OsmY;protein_id=WP_014227828.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5157322 5158911 . - . ID=gene-PHA56_RS24335;Name=prfC;gbkey=Gene;gene=prfC;gene_biotype=protein_coding;locus_tag=PHA56_RS24335;old_locus_tag=PHA56_24335 NZ_CP116214.1 Protein Homology CDS 5157322 5158911 . - 0 ID=cds-WP_004098388.1;Parent=gene-PHA56_RS24335;Dbxref=Genbank:WP_004098388.1;Name=WP_004098388.1;Ontology_term=GO:0006415,GO:0003747,GO:0005525;gbkey=CDS;gene=prfC;go_function=translation release factor activity|0003747||IEA,GTP binding|0005525||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123889.1;locus_tag=PHA56_RS24335;product=peptide chain release factor 3;protein_id=WP_004098388.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5159004 5159681 . - . ID=gene-PHA56_RS24340;Name=yjjG;gbkey=Gene;gene=yjjG;gene_biotype=protein_coding;locus_tag=PHA56_RS24340;old_locus_tag=PHA56_24340 NZ_CP116214.1 Protein Homology CDS 5159004 5159681 . - 0 ID=cds-WP_038424050.1;Parent=gene-PHA56_RS24340;Dbxref=Genbank:WP_038424050.1;Name=WP_038424050.1;Ontology_term=GO:0008253;gbkey=CDS;gene=yjjG;go_function=5'-nucleotidase activity|0008253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224983.1;locus_tag=PHA56_RS24340;product=pyrimidine 5'-nucleotidase;protein_id=WP_038424050.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5159696 5160142 . - . ID=gene-PHA56_RS24345;Name=rimI;gbkey=Gene;gene=rimI;gene_biotype=protein_coding;locus_tag=PHA56_RS24345;old_locus_tag=PHA56_24345 NZ_CP116214.1 Protein Homology CDS 5159696 5160142 . - 0 ID=cds-WP_004098383.1;Parent=gene-PHA56_RS24345;Dbxref=Genbank:WP_004098383.1;Name=WP_004098383.1;Ontology_term=GO:0006474,GO:0008080;gbkey=CDS;gene=rimI;go_function=N-acetyltransferase activity|0008080||IEA;go_process=N-terminal protein amino acid acetylation|0006474||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224982.1;locus_tag=PHA56_RS24345;product=ribosomal protein S18-alanine N-acetyltransferase;protein_id=WP_004098383.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5160111 5160524 . - . ID=gene-PHA56_RS24350;Name=PHA56_RS24350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS24350;old_locus_tag=PHA56_24350 NZ_CP116214.1 Protein Homology CDS 5160111 5160524 . - 0 ID=cds-WP_014837349.1;Parent=gene-PHA56_RS24350;Dbxref=Genbank:WP_014837349.1;Name=WP_014837349.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224981.1;locus_tag=PHA56_RS24350;product=DNA polymerase III subunit psi;protein_id=WP_014837349.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5160683 5161711 . + . ID=gene-PHA56_RS24355;Name=rsmC;gbkey=Gene;gene=rsmC;gene_biotype=protein_coding;locus_tag=PHA56_RS24355;old_locus_tag=PHA56_24355 NZ_CP116214.1 Protein Homology CDS 5160683 5161711 . + 0 ID=cds-WP_014227826.1;Parent=gene-PHA56_RS24355;Dbxref=Genbank:WP_014227826.1;Name=WP_014227826.1;Ontology_term=GO:0006364,GO:0003676,GO:0008990;gbkey=CDS;gene=rsmC;go_function=nucleic acid binding|0003676||IEA,rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224980.1;locus_tag=PHA56_RS24355;product=16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC;protein_id=WP_014227826.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5161880 5161966 . + . ID=gene-PHA56_RS24360;Name=PHA56_RS24360;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA56_RS24360;old_locus_tag=PHA56_24360 NZ_CP116214.1 tRNAscan-SE tRNA 5161880 5161966 . + . ID=rna-PHA56_RS24360;Parent=gene-PHA56_RS24360;anticodon=(pos:5161914..5161916);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS24360;product=tRNA-Leu NZ_CP116214.1 tRNAscan-SE exon 5161880 5161966 . + . ID=exon-PHA56_RS24360-1;Parent=rna-PHA56_RS24360;anticodon=(pos:5161914..5161916);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS24360;product=tRNA-Leu NZ_CP116214.1 RefSeq gene 5161995 5162081 . + . ID=gene-PHA56_RS24365;Name=PHA56_RS24365;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA56_RS24365;old_locus_tag=PHA56_24365 NZ_CP116214.1 tRNAscan-SE tRNA 5161995 5162081 . + . ID=rna-PHA56_RS24365;Parent=gene-PHA56_RS24365;anticodon=(pos:5162029..5162031);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS24365;product=tRNA-Leu NZ_CP116214.1 tRNAscan-SE exon 5161995 5162081 . + . ID=exon-PHA56_RS24365-1;Parent=rna-PHA56_RS24365;anticodon=(pos:5162029..5162031);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS24365;product=tRNA-Leu NZ_CP116214.1 RefSeq gene 5162113 5162199 . + . ID=gene-PHA56_RS24370;Name=PHA56_RS24370;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA56_RS24370;old_locus_tag=PHA56_24370 NZ_CP116214.1 tRNAscan-SE tRNA 5162113 5162199 . + . ID=rna-PHA56_RS24370;Parent=gene-PHA56_RS24370;anticodon=(pos:5162147..5162149);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS24370;product=tRNA-Leu NZ_CP116214.1 tRNAscan-SE exon 5162113 5162199 . + . ID=exon-PHA56_RS24370-1;Parent=rna-PHA56_RS24370;anticodon=(pos:5162147..5162149);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS24370;product=tRNA-Leu NZ_CP116214.1 RefSeq gene 5162219 5162458 . - . ID=gene-PHA56_RS24375;Name=PHA56_RS24375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS24375;old_locus_tag=PHA56_24375 NZ_CP116214.1 Protein Homology CDS 5162219 5162458 . - 0 ID=cds-WP_014227825.1;Parent=gene-PHA56_RS24375;Dbxref=Genbank:WP_014227825.1;Name=WP_014227825.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002887654.1;locus_tag=PHA56_RS24375;product=DUF1435 domain-containing protein;protein_id=WP_014227825.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5162723 5163769 . + . ID=gene-PHA56_RS24380;Name=PHA56_RS24380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS24380;old_locus_tag=PHA56_24380 NZ_CP116214.1 Protein Homology CDS 5162723 5163769 . + 0 ID=cds-WP_014227824.1;Parent=gene-PHA56_RS24380;Dbxref=Genbank:WP_014227824.1;Name=WP_014227824.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224977.1;locus_tag=PHA56_RS24380;product=GGDEF domain-containing protein;protein_id=WP_014227824.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5163878 5164666 . + . ID=gene-PHA56_RS24385;Name=fhuF;gbkey=Gene;gene=fhuF;gene_biotype=protein_coding;locus_tag=PHA56_RS24385;old_locus_tag=PHA56_24385 NZ_CP116214.1 Protein Homology CDS 5163878 5164666 . + 0 ID=cds-WP_038424048.1;Parent=gene-PHA56_RS24385;Dbxref=Genbank:WP_038424048.1;Name=WP_038424048.1;Ontology_term=GO:0051537;gbkey=CDS;gene=fhuF;go_function=2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224976.1;locus_tag=PHA56_RS24385;product=siderophore-iron reductase FhuF;protein_id=WP_038424048.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5164713 5166056 . - . ID=gene-PHA56_RS24390;Name=PHA56_RS24390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS24390;old_locus_tag=PHA56_24390 NZ_CP116214.1 Protein Homology CDS 5164713 5166056 . - 0 ID=cds-WP_014227822.1;Parent=gene-PHA56_RS24390;Dbxref=Genbank:WP_014227822.1;Name=WP_014227822.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224975.1;locus_tag=PHA56_RS24390;product=PTS sugar transporter subunit IIC;protein_id=WP_014227822.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5166397 5166855 . + . ID=gene-PHA56_RS24395;Name=PHA56_RS24395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS24395;old_locus_tag=PHA56_24395 NZ_CP116214.1 Protein Homology CDS 5166397 5166855 . + 0 ID=cds-WP_014227821.1;Parent=gene-PHA56_RS24395;Dbxref=Genbank:WP_014227821.1;Name=WP_014227821.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224974.1;locus_tag=PHA56_RS24395;product=YbaK/EbsC family protein;protein_id=WP_014227821.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5166869 5167549 . - . ID=gene-PHA56_RS24400;Name=bglJ;gbkey=Gene;gene=bglJ;gene_biotype=protein_coding;locus_tag=PHA56_RS24400;old_locus_tag=PHA56_24400 NZ_CP116214.1 Protein Homology CDS 5166869 5167549 . - 0 ID=cds-WP_038424046.1;Parent=gene-PHA56_RS24400;Dbxref=Genbank:WP_038424046.1;Name=WP_038424046.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=bglJ;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004128669.1;locus_tag=PHA56_RS24400;product=DNA-binding transcriptional activator BglJ;protein_id=WP_038424046.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5167510 5168232 . - . ID=gene-PHA56_RS24405;Name=PHA56_RS24405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS24405;old_locus_tag=PHA56_24405 NZ_CP116214.1 Protein Homology CDS 5167510 5168232 . - 0 ID=cds-WP_014227819.1;Parent=gene-PHA56_RS24405;Dbxref=Genbank:WP_014227819.1;Name=WP_014227819.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008807539.1;locus_tag=PHA56_RS24405;product=LuxR C-terminal-related transcriptional regulator;protein_id=WP_014227819.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5168511 5169380 . - . ID=gene-PHA56_RS24410;Name=PHA56_RS24410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS24410;old_locus_tag=PHA56_24410 NZ_CP116214.1 Protein Homology CDS 5168511 5169380 . - 0 ID=cds-WP_014227817.1;Parent=gene-PHA56_RS24410;Dbxref=Genbank:WP_014227817.1;Name=WP_014227817.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004098369.1;locus_tag=PHA56_RS24410;product=helix-turn-helix domain-containing protein;protein_id=WP_014227817.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5169403 5170587 . - . ID=gene-PHA56_RS24415;Name=pobA;gbkey=Gene;gene=pobA;gene_biotype=protein_coding;locus_tag=PHA56_RS24415;old_locus_tag=PHA56_24415 NZ_CP116214.1 Protein Homology CDS 5169403 5170587 . - 0 ID=cds-WP_038424045.1;Parent=gene-PHA56_RS24415;Dbxref=Genbank:WP_038424045.1;Name=WP_038424045.1;Ontology_term=GO:0018874,GO:0018659;gbkey=CDS;gene=pobA;go_function=4-hydroxybenzoate 3-monooxygenase activity|0018659||IEA;go_process=benzoate metabolic process|0018874||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224970.1;locus_tag=PHA56_RS24415;product=4-hydroxybenzoate 3-monooxygenase;protein_id=WP_038424045.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5170871 5171647 . + . ID=gene-PHA56_RS24420;Name=PHA56_RS24420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS24420;old_locus_tag=PHA56_24420 NZ_CP116214.1 Protein Homology CDS 5170871 5171647 . + 0 ID=cds-WP_025106875.1;Parent=gene-PHA56_RS24420;Dbxref=Genbank:WP_025106875.1;Name=WP_025106875.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224968.1;locus_tag=PHA56_RS24420;product=threonine/serine exporter ThrE family protein;protein_id=WP_025106875.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5171638 5172111 . + . ID=gene-PHA56_RS24425;Name=PHA56_RS24425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS24425;old_locus_tag=PHA56_24425 NZ_CP116214.1 Protein Homology CDS 5171638 5172111 . + 0 ID=cds-WP_004098364.1;Parent=gene-PHA56_RS24425;Dbxref=Genbank:WP_004098364.1;Name=WP_004098364.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224967.1;locus_tag=PHA56_RS24425;product=threonine/serine exporter;protein_id=WP_004098364.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5172220 5172759 . + . ID=gene-PHA56_RS24430;Name=dnaT;gbkey=Gene;gene=dnaT;gene_biotype=protein_coding;locus_tag=PHA56_RS24430;old_locus_tag=PHA56_24430 NZ_CP116214.1 Protein Homology CDS 5172220 5172759 . + 0 ID=cds-WP_032692989.1;Parent=gene-PHA56_RS24430;Dbxref=Genbank:WP_032692989.1;Name=WP_032692989.1;gbkey=CDS;gene=dnaT;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224966.1;locus_tag=PHA56_RS24430;product=primosomal protein DnaT;protein_id=WP_032692989.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5172762 5173499 . + . ID=gene-PHA56_RS24435;Name=dnaC;gbkey=Gene;gene=dnaC;gene_biotype=protein_coding;locus_tag=PHA56_RS24435;old_locus_tag=PHA56_24435 NZ_CP116214.1 Protein Homology CDS 5172762 5173499 . + 0 ID=cds-WP_014227813.1;Parent=gene-PHA56_RS24435;Dbxref=Genbank:WP_014227813.1;Name=WP_014227813.1;gbkey=CDS;gene=dnaC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224965.1;locus_tag=PHA56_RS24435;product=DNA replication protein DnaC;protein_id=WP_014227813.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5173565 5174059 . + . ID=gene-PHA56_RS24440;Name=PHA56_RS24440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS24440;old_locus_tag=PHA56_24440 NZ_CP116214.1 Protein Homology CDS 5173565 5174059 . + 0 ID=cds-WP_014227812.1;Parent=gene-PHA56_RS24440;Dbxref=Genbank:WP_014227812.1;Name=WP_014227812.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014227812.1;locus_tag=PHA56_RS24440;product=DUF2501 domain-containing protein;protein_id=WP_014227812.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5174317 5176608 . + . ID=gene-PHA56_RS24445;Name=opgB;gbkey=Gene;gene=opgB;gene_biotype=protein_coding;locus_tag=PHA56_RS24445;old_locus_tag=PHA56_24445 NZ_CP116214.1 Protein Homology CDS 5174317 5176608 . + 0 ID=cds-WP_014227811.1;Parent=gene-PHA56_RS24445;Dbxref=Genbank:WP_014227811.1;Name=WP_014227811.1;Ontology_term=GO:0008484;gbkey=CDS;gene=opgB;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224963.1;locus_tag=PHA56_RS24445;product=phosphatidylglycerol--membrane-oligosaccharide glycerophosphotransferase;protein_id=WP_014227811.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5176662 5177600 . - . ID=gene-PHA56_RS24450;Name=PHA56_RS24450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS24450;old_locus_tag=PHA56_24450 NZ_CP116214.1 Protein Homology CDS 5176662 5177600 . - 0 ID=cds-WP_032692991.1;Parent=gene-PHA56_RS24450;Dbxref=Genbank:WP_032692991.1;Name=WP_032692991.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017145046.1;locus_tag=PHA56_RS24450;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=WP_032692991.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5177740 5178750 . - . ID=gene-PHA56_RS24455;Name=PHA56_RS24455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS24455;old_locus_tag=PHA56_24455 NZ_CP116214.1 Protein Homology CDS 5177740 5178750 . - 0 ID=cds-WP_025106878.1;Parent=gene-PHA56_RS24455;Dbxref=Genbank:WP_025106878.1;Name=WP_025106878.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224961.1;locus_tag=PHA56_RS24455;product=SIS domain-containing protein;protein_id=WP_025106878.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5178768 5179829 . - . ID=gene-PHA56_RS24460;Name=PHA56_RS24460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS24460;old_locus_tag=PHA56_24460 NZ_CP116214.1 Protein Homology CDS 5178768 5179829 . - 0 ID=cds-WP_014227808.1;Parent=gene-PHA56_RS24460;Dbxref=Genbank:WP_014227808.1;Name=WP_014227808.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224960.1;locus_tag=PHA56_RS24460;product=SIS domain-containing protein;protein_id=WP_014227808.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5179842 5180693 . - . ID=gene-PHA56_RS24465;Name=PHA56_RS24465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS24465;old_locus_tag=PHA56_24465 NZ_CP116214.1 Protein Homology CDS 5179842 5180693 . - 0 ID=cds-WP_014227807.1;Parent=gene-PHA56_RS24465;Dbxref=Genbank:WP_014227807.1;Name=WP_014227807.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224959.1;locus_tag=PHA56_RS24465;product=PTS system mannose/fructose/sorbose family transporter subunit IID;protein_id=WP_014227807.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5180671 5181450 . - . ID=gene-PHA56_RS24470;Name=PHA56_RS24470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS24470;old_locus_tag=PHA56_24470 NZ_CP116214.1 Protein Homology CDS 5180671 5181450 . - 0 ID=cds-WP_025106880.1;Parent=gene-PHA56_RS24470;Dbxref=Genbank:WP_025106880.1;Name=WP_025106880.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224958.1;locus_tag=PHA56_RS24470;product=PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC;protein_id=WP_025106880.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5181469 5181939 . - . ID=gene-PHA56_RS24475;Name=PHA56_RS24475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS24475;old_locus_tag=PHA56_24475 NZ_CP116214.1 Protein Homology CDS 5181469 5181939 . - 0 ID=cds-WP_025106881.1;Parent=gene-PHA56_RS24475;Dbxref=Genbank:WP_025106881.1;Name=WP_025106881.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224957.1;locus_tag=PHA56_RS24475;product=PTS sugar transporter subunit IIB;protein_id=WP_025106881.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5181954 5182376 . - . ID=gene-PHA56_RS24480;Name=PHA56_RS24480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS24480;old_locus_tag=PHA56_24480 NZ_CP116214.1 Protein Homology CDS 5181954 5182376 . - 0 ID=cds-WP_038424043.1;Parent=gene-PHA56_RS24480;Dbxref=Genbank:WP_038424043.1;Name=WP_038424043.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224956.1;locus_tag=PHA56_RS24480;product=PTS sugar transporter subunit IIA;protein_id=WP_038424043.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5182476 5185241 . - . ID=gene-PHA56_RS24485;Name=PHA56_RS24485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS24485;old_locus_tag=PHA56_24485 NZ_CP116214.1 Protein Homology CDS 5182476 5185241 . - 0 ID=cds-WP_076752480.1;Parent=gene-PHA56_RS24485;Dbxref=Genbank:WP_076752480.1;Name=WP_076752480.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224955.1;locus_tag=PHA56_RS24485;product=sigma-54-dependent transcriptional regulator;protein_id=WP_076752480.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5185376 5186821 . - . ID=gene-PHA56_RS24490;Name=PHA56_RS24490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS24490;old_locus_tag=PHA56_24490 NZ_CP116214.1 Protein Homology CDS 5185376 5186821 . - 0 ID=cds-WP_038424041.1;Parent=gene-PHA56_RS24490;Dbxref=Genbank:WP_038424041.1;Name=WP_038424041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224954.1;locus_tag=PHA56_RS24490;product=tagaturonate reductase;protein_id=WP_038424041.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5186833 5187855 . - . ID=gene-PHA56_RS24495;Name=PHA56_RS24495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS24495;old_locus_tag=PHA56_24495 NZ_CP116214.1 Protein Homology CDS 5186833 5187855 . - 0 ID=cds-WP_014227801.1;Parent=gene-PHA56_RS24495;Dbxref=Genbank:WP_014227801.1;Name=WP_014227801.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224953.1;locus_tag=PHA56_RS24495;product=zinc-binding alcohol dehydrogenase family protein;protein_id=WP_014227801.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5187994 5188908 . + . ID=gene-PHA56_RS24500;Name=PHA56_RS24500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS24500;old_locus_tag=PHA56_24500 NZ_CP116214.1 Protein Homology CDS 5187994 5188908 . + 0 ID=cds-WP_014227800.1;Parent=gene-PHA56_RS24500;Dbxref=Genbank:WP_014227800.1;Name=WP_014227800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224952.1;locus_tag=PHA56_RS24500;product=GntR family transcriptional regulator;protein_id=WP_014227800.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5189088 5190449 . + . ID=gene-PHA56_RS24505;Name=PHA56_RS24505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS24505;old_locus_tag=PHA56_24505 NZ_CP116214.1 Protein Homology CDS 5189088 5190449 . + 0 ID=cds-WP_038424040.1;Parent=gene-PHA56_RS24505;Dbxref=Genbank:WP_038424040.1;Name=WP_038424040.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016809288.1;locus_tag=PHA56_RS24505;product=MFS transporter;protein_id=WP_038424040.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5190453 5191289 . - . ID=gene-PHA56_RS24510;Name=PHA56_RS24510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS24510;old_locus_tag=PHA56_24510 NZ_CP116214.1 Protein Homology CDS 5190453 5191289 . - 0 ID=cds-WP_038424039.1;Parent=gene-PHA56_RS24510;Dbxref=Genbank:WP_038424039.1;Name=WP_038424039.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014227798.1;locus_tag=PHA56_RS24510;product=GNAT family N-acetyltransferase;protein_id=WP_038424039.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5191322 5191855 . + . ID=gene-PHA56_RS24515;Name=PHA56_RS24515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS24515;old_locus_tag=PHA56_24515 NZ_CP116214.1 Protein Homology CDS 5191322 5191855 . + 0 ID=cds-WP_038424038.1;Parent=gene-PHA56_RS24515;Dbxref=Genbank:WP_038424038.1;Name=WP_038424038.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004146075.1;locus_tag=PHA56_RS24515;product=GNAT family N-acetyltransferase;protein_id=WP_038424038.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5191926 5192789 . + . ID=gene-PHA56_RS24520;Name=PHA56_RS24520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS24520;old_locus_tag=PHA56_24520 NZ_CP116214.1 Protein Homology CDS 5191926 5192789 . + 0 ID=cds-WP_014227796.1;Parent=gene-PHA56_RS24520;Dbxref=Genbank:WP_014227796.1;Name=WP_014227796.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224948.1;locus_tag=PHA56_RS24520;product=MurR/RpiR family transcriptional regulator;protein_id=WP_014227796.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5192786 5193388 . - . ID=gene-PHA56_RS24525;Name=PHA56_RS24525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS24525;old_locus_tag=PHA56_24525 NZ_CP116214.1 Protein Homology CDS 5192786 5193388 . - 0 ID=cds-WP_014227795.1;Parent=gene-PHA56_RS24525;Dbxref=Genbank:WP_014227795.1;Name=WP_014227795.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016809287.1;locus_tag=PHA56_RS24525;product=2-dehydro-3-deoxy-6-phosphogalactonate aldolase;protein_id=WP_014227795.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5193375 5194247 . - . ID=gene-PHA56_RS24530;Name=PHA56_RS24530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS24530;old_locus_tag=PHA56_24530 NZ_CP116214.1 Protein Homology CDS 5193375 5194247 . - 0 ID=cds-WP_038424037.1;Parent=gene-PHA56_RS24530;Dbxref=Genbank:WP_038424037.1;Name=WP_038424037.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020801833.1;locus_tag=PHA56_RS24530;product=2-dehydro-3-deoxygalactonokinase;protein_id=WP_038424037.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5194244 5195728 . - . ID=gene-PHA56_RS24535;Name=PHA56_RS24535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS24535;old_locus_tag=PHA56_24535 NZ_CP116214.1 Protein Homology CDS 5194244 5195728 . - 0 ID=cds-WP_271292938.1;Parent=gene-PHA56_RS24535;Dbxref=Genbank:WP_271292938.1;Name=WP_271292938.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004098323.1;locus_tag=PHA56_RS24535;product=sodium:solute symporter family protein;protein_id=WP_271292938.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5195832 5196224 . - . ID=gene-PHA56_RS24540;Name=PHA56_RS24540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS24540;old_locus_tag=PHA56_24540 NZ_CP116214.1 Protein Homology CDS 5195832 5196224 . - 0 ID=cds-WP_038424036.1;Parent=gene-PHA56_RS24540;Dbxref=Genbank:WP_038424036.1;Name=WP_038424036.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004098320.1;locus_tag=PHA56_RS24540;product=RidA family protein;protein_id=WP_038424036.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5196235 5197674 . - . ID=gene-PHA56_RS24545;Name=PHA56_RS24545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS24545;old_locus_tag=PHA56_24545 NZ_CP116214.1 Protein Homology CDS 5196235 5197674 . - 0 ID=cds-WP_038424035.1;Parent=gene-PHA56_RS24545;Dbxref=Genbank:WP_038424035.1;Name=WP_038424035.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224943.1;locus_tag=PHA56_RS24545;product=D-aminoacylase;protein_id=WP_038424035.1;transl_table=11 NZ_CP116214.1 RefSeq pseudogene 5197652 5197778 . + . ID=gene-PHA56_RS24550;Name=PHA56_RS24550;end_range=5197778,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS24550;old_locus_tag=PHA56_24550;partial=true;pseudo=true NZ_CP116214.1 Protein Homology CDS 5197652 5197778 . + 0 ID=cds-PHA56_RS24550;Parent=gene-PHA56_RS24550;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=5197778,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224942.1;locus_tag=PHA56_RS24550;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP116214.1 RefSeq gene 5197876 5199090 . + . ID=gene-PHA56_RS24555;Name=PHA56_RS24555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS24555;old_locus_tag=PHA56_24555 NZ_CP116214.1 Protein Homology CDS 5197876 5199090 . + 0 ID=cds-WP_038424034.1;Parent=gene-PHA56_RS24555;Dbxref=Genbank:WP_038424034.1;Name=WP_038424034.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224941.1;locus_tag=PHA56_RS24555;product=amino acid deaminase;protein_id=WP_038424034.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5199212 5199649 . - . ID=gene-PHA56_RS24560;Name=hpaR;gbkey=Gene;gene=hpaR;gene_biotype=protein_coding;locus_tag=PHA56_RS24560;old_locus_tag=PHA56_24560 NZ_CP116214.1 Protein Homology CDS 5199212 5199649 . - 0 ID=cds-WP_014227790.1;Parent=gene-PHA56_RS24560;Dbxref=Genbank:WP_014227790.1;Name=WP_014227790.1;Ontology_term=GO:0045892,GO:0003700;gbkey=CDS;gene=hpaR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004133165.1;locus_tag=PHA56_RS24560;product=homoprotocatechuate degradation operon regulator HpaR;protein_id=WP_014227790.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5199935 5200567 . + . ID=gene-PHA56_RS24565;Name=PHA56_RS24565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS24565;old_locus_tag=PHA56_24565 NZ_CP116214.1 Protein Homology CDS 5199935 5200567 . + 0 ID=cds-WP_014227789.1;Parent=gene-PHA56_RS24565;Dbxref=Genbank:WP_014227789.1;Name=WP_014227789.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224935.1;locus_tag=PHA56_RS24565;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_014227789.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5200564 5201328 . + . ID=gene-PHA56_RS24570;Name=PHA56_RS24570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS24570;old_locus_tag=PHA56_24570 NZ_CP116214.1 Protein Homology CDS 5200564 5201328 . + 0 ID=cds-WP_014837337.1;Parent=gene-PHA56_RS24570;Dbxref=Genbank:WP_014837337.1;Name=WP_014837337.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004894503.1;locus_tag=PHA56_RS24570;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_014837337.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5201325 5202791 . + . ID=gene-PHA56_RS24575;Name=hpaE;gbkey=Gene;gene=hpaE;gene_biotype=protein_coding;locus_tag=PHA56_RS24575;old_locus_tag=PHA56_24575 NZ_CP116214.1 Protein Homology CDS 5201325 5202791 . + 0 ID=cds-WP_014227787.1;Parent=gene-PHA56_RS24575;Dbxref=Genbank:WP_014227787.1;Name=WP_014227787.1;Ontology_term=GO:1901023,GO:0018480;gbkey=CDS;gene=hpaE;go_function=5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase activity|0018480||IEA;go_process=4-hydroxyphenylacetate catabolic process|1901023||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224933.1;locus_tag=PHA56_RS24575;product=5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase;protein_id=WP_014227787.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5202793 5203650 . + . ID=gene-PHA56_RS24580;Name=hpaD;gbkey=Gene;gene=hpaD;gene_biotype=protein_coding;locus_tag=PHA56_RS24580;old_locus_tag=PHA56_24580 NZ_CP116214.1 Protein Homology CDS 5202793 5203650 . + 0 ID=cds-WP_004098307.1;Parent=gene-PHA56_RS24580;Dbxref=Genbank:WP_004098307.1;Name=WP_004098307.1;Ontology_term=GO:0006725,GO:0008198,GO:0008687;gbkey=CDS;gene=hpaD;go_function=ferrous iron binding|0008198||IEA,3%2C4-dihydroxyphenylacetate 2%2C3-dioxygenase activity|0008687||IEA;go_process=cellular aromatic compound metabolic process|0006725||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224932.1;locus_tag=PHA56_RS24580;product=3%2C4-dihydroxyphenylacetate 2%2C3-dioxygenase;protein_id=WP_004098307.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5203663 5204043 . + . ID=gene-PHA56_RS24585;Name=PHA56_RS24585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS24585;old_locus_tag=PHA56_24585 NZ_CP116214.1 Protein Homology CDS 5203663 5204043 . + 0 ID=cds-WP_004098305.1;Parent=gene-PHA56_RS24585;Dbxref=Genbank:WP_004098305.1;Name=WP_004098305.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460077.1;locus_tag=PHA56_RS24585;product=5-carboxymethyl-2-hydroxymuconate Delta-isomerase;protein_id=WP_004098305.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5204143 5204946 . + . ID=gene-PHA56_RS24590;Name=hpaH;gbkey=Gene;gene=hpaH;gene_biotype=protein_coding;locus_tag=PHA56_RS24590;old_locus_tag=PHA56_24590 NZ_CP116214.1 Protein Homology CDS 5204143 5204946 . + 0 ID=cds-WP_004098303.1;Parent=gene-PHA56_RS24590;Dbxref=Genbank:WP_004098303.1;Name=WP_004098303.1;Ontology_term=GO:0018817;gbkey=CDS;gene=hpaH;go_function=2-oxo-hept-3-ene-1%2C7-dioate hydratase activity|0018817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460078.1;locus_tag=PHA56_RS24590;product=2-oxo-hepta-3-ene-1%2C7-dioic acid hydratase;protein_id=WP_004098303.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5204957 5205748 . + . ID=gene-PHA56_RS24595;Name=hpaI;gbkey=Gene;gene=hpaI;gene_biotype=protein_coding;locus_tag=PHA56_RS24595;old_locus_tag=PHA56_24595 NZ_CP116214.1 Protein Homology CDS 5204957 5205748 . + 0 ID=cds-WP_038424032.1;Parent=gene-PHA56_RS24595;Dbxref=Genbank:WP_038424032.1;Name=WP_038424032.1;Ontology_term=GO:0018802;gbkey=CDS;gene=hpaI;go_function=2%2C4-dihydroxyhept-2-ene-1%2C7-dioate aldolase activity|0018802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460079.1;locus_tag=PHA56_RS24595;product=4-hydroxy-2-oxoheptanedioate aldolase;protein_id=WP_038424032.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5205792 5207168 . + . ID=gene-PHA56_RS24600;Name=hpaX;gbkey=Gene;gene=hpaX;gene_biotype=protein_coding;locus_tag=PHA56_RS24600;old_locus_tag=PHA56_24600 NZ_CP116214.1 Protein Homology CDS 5205792 5207168 . + 0 ID=cds-WP_014227785.1;Parent=gene-PHA56_RS24600;Dbxref=Genbank:WP_014227785.1;Name=WP_014227785.1;Ontology_term=GO:0055085,GO:1900754,GO:1901241;gbkey=CDS;gene=hpaX;go_function=4-hydroxyphenylacetate transmembrane transporter activity|1901241||IEA;go_process=transmembrane transport|0055085||IEA,4-hydroxyphenylacetate transport|1900754||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460080.1;locus_tag=PHA56_RS24600;product=4-hydroxyphenylacetate permease;protein_id=WP_014227785.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5207178 5208068 . + . ID=gene-PHA56_RS24605;Name=hpaA;gbkey=Gene;gene=hpaA;gene_biotype=protein_coding;locus_tag=PHA56_RS24605;old_locus_tag=PHA56_24605 NZ_CP116214.1 Protein Homology CDS 5207178 5208068 . + 0 ID=cds-WP_009652862.1;Parent=gene-PHA56_RS24605;Dbxref=Genbank:WP_009652862.1;Name=WP_009652862.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=hpaA;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224927.1;locus_tag=PHA56_RS24605;product=4-hydroxyphenylacetate catabolism regulatory protein HpaA;protein_id=WP_009652862.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5208431 5209993 . + . ID=gene-PHA56_RS24610;Name=hpaB;gbkey=Gene;gene=hpaB;gene_biotype=protein_coding;locus_tag=PHA56_RS24610;old_locus_tag=PHA56_24610 NZ_CP116214.1 Protein Homology CDS 5208431 5209993 . + 0 ID=cds-WP_032719290.1;Parent=gene-PHA56_RS24610;Dbxref=Genbank:WP_032719290.1;Name=WP_032719290.1;gbkey=CDS;gene=hpaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000801462.1;locus_tag=PHA56_RS24610;product=4-hydroxyphenylacetate 3-monooxygenase%2C oxygenase component;protein_id=WP_032719290.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5210013 5210525 . + . ID=gene-PHA56_RS24615;Name=PHA56_RS24615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS24615;old_locus_tag=PHA56_24615 NZ_CP116214.1 Protein Homology CDS 5210013 5210525 . + 0 ID=cds-WP_004098296.1;Parent=gene-PHA56_RS24615;Dbxref=Genbank:WP_004098296.1;Name=WP_004098296.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014837333.1;locus_tag=PHA56_RS24615;product=4-hydroxyphenylacetate 3-monooxygenase reductase subunit;protein_id=WP_004098296.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5210823 5212973 . + . ID=gene-PHA56_RS24620;Name=btsT;gbkey=Gene;gene=btsT;gene_biotype=protein_coding;locus_tag=PHA56_RS24620;old_locus_tag=PHA56_24620 NZ_CP116214.1 Protein Homology CDS 5210823 5212973 . + 0 ID=cds-WP_014227784.1;Parent=gene-PHA56_RS24620;Dbxref=Genbank:WP_014227784.1;Name=WP_014227784.1;gbkey=CDS;gene=btsT;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224922.1;locus_tag=PHA56_RS24620;product=pyruvate/proton symporter BtsT;protein_id=WP_014227784.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5213083 5213286 . + . ID=gene-PHA56_RS24625;Name=PHA56_RS24625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS24625;old_locus_tag=PHA56_24625 NZ_CP116214.1 Protein Homology CDS 5213083 5213286 . + 0 ID=cds-WP_004098292.1;Parent=gene-PHA56_RS24625;Dbxref=Genbank:WP_004098292.1;Name=WP_004098292.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224921.1;locus_tag=PHA56_RS24625;product=YbdD/YjiX family protein;protein_id=WP_004098292.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5213298 5214254 . + . ID=gene-PHA56_RS24630;Name=yjiA;gbkey=Gene;gene=yjiA;gene_biotype=protein_coding;locus_tag=PHA56_RS24630;old_locus_tag=PHA56_24630 NZ_CP116214.1 Protein Homology CDS 5213298 5214254 . + 0 ID=cds-WP_032693006.1;Parent=gene-PHA56_RS24630;Dbxref=Genbank:WP_032693006.1;Name=WP_032693006.1;gbkey=CDS;gene=yjiA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224920.1;locus_tag=PHA56_RS24630;product=GTPase;protein_id=WP_032693006.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5214603 5215148 . + . ID=gene-PHA56_RS24635;Name=PHA56_RS24635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS24635;old_locus_tag=PHA56_24635 NZ_CP116214.1 Protein Homology CDS 5214603 5215148 . + 0 ID=cds-WP_004098290.1;Parent=gene-PHA56_RS24635;Dbxref=Genbank:WP_004098290.1;Name=WP_004098290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224919.1;locus_tag=PHA56_RS24635;product=YfaZ family outer membrane protein;protein_id=WP_004098290.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5215148 5215468 . + . ID=gene-PHA56_RS24640;Name=PHA56_RS24640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS24640;old_locus_tag=PHA56_24640 NZ_CP116214.1 Protein Homology CDS 5215148 5215468 . + 0 ID=cds-WP_004098289.1;Parent=gene-PHA56_RS24640;Dbxref=Genbank:WP_004098289.1;Name=WP_004098289.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004098289.1;locus_tag=PHA56_RS24640;product=hypothetical protein;protein_id=WP_004098289.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5215513 5216883 . - . ID=gene-PHA56_RS24645;Name=PHA56_RS24645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS24645;old_locus_tag=PHA56_24645 NZ_CP116214.1 Protein Homology CDS 5215513 5216883 . - 0 ID=cds-WP_038424031.1;Parent=gene-PHA56_RS24645;Dbxref=Genbank:WP_038424031.1;Name=WP_038424031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224918.1;locus_tag=PHA56_RS24645;product=NAD-dependent succinate-semialdehyde dehydrogenase;protein_id=WP_038424031.1;transl_table=11 NZ_CP116214.1 RefSeq pseudogene 5217062 5217544 . - . ID=gene-PHA56_RS24650;Name=PHA56_RS24650;end_range=5217544,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS24650;old_locus_tag=PHA56_24650;partial=true;pseudo=true NZ_CP116214.1 Protein Homology CDS 5217062 5217544 . - 0 ID=cds-PHA56_RS24650;Parent=gene-PHA56_RS24650;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=5217544,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224917.1;locus_tag=PHA56_RS24650;partial=true;product=Rpn family recombination-promoting nuclease/putative transposase;pseudo=true;transl_table=11 NZ_CP116214.1 RefSeq gene 5217586 5218401 . + . ID=gene-PHA56_RS24655;Name=PHA56_RS24655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS24655;old_locus_tag=PHA56_24655 NZ_CP116214.1 Protein Homology CDS 5217586 5218401 . + 0 ID=cds-WP_014227779.1;Parent=gene-PHA56_RS24655;Dbxref=Genbank:WP_014227779.1;Name=WP_014227779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004108585.1;locus_tag=PHA56_RS24655;product=AraC family transcriptional regulator;protein_id=WP_014227779.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5218448 5219089 . + . ID=gene-PHA56_RS24660;Name=PHA56_RS24660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS24660;old_locus_tag=PHA56_24660 NZ_CP116214.1 Protein Homology CDS 5218448 5219089 . + 0 ID=cds-WP_032693010.1;Parent=gene-PHA56_RS24660;Dbxref=Genbank:WP_032693010.1;Name=WP_032693010.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001727645.1;locus_tag=PHA56_RS24660;product=LysE family translocator;protein_id=WP_032693010.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5219179 5219613 . - . ID=gene-PHA56_RS24665;Name=PHA56_RS24665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS24665;old_locus_tag=PHA56_24665 NZ_CP116214.1 Protein Homology CDS 5219179 5219613 . - 0 ID=cds-WP_032693011.1;Parent=gene-PHA56_RS24665;Dbxref=Genbank:WP_032693011.1;Name=WP_032693011.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004133187.1;locus_tag=PHA56_RS24665;product=hypothetical protein;protein_id=WP_032693011.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5219914 5221203 . + . ID=gene-PHA56_RS24670;Name=PHA56_RS24670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS24670;old_locus_tag=PHA56_24670 NZ_CP116214.1 Protein Homology CDS 5219914 5221203 . + 0 ID=cds-WP_014227777.1;Parent=gene-PHA56_RS24670;Dbxref=Genbank:WP_014227777.1;Name=WP_014227777.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004098278.1;locus_tag=PHA56_RS24670;product=DUF445 domain-containing protein;protein_id=WP_014227777.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5221367 5222608 . + . ID=gene-PHA56_RS24675;Name=mdtM;gbkey=Gene;gene=mdtM;gene_biotype=protein_coding;locus_tag=PHA56_RS24675;old_locus_tag=PHA56_24675 NZ_CP116214.1 Protein Homology CDS 5221367 5222608 . + 0 ID=cds-WP_032719294.1;Parent=gene-PHA56_RS24675;Dbxref=Genbank:WP_032719294.1;Name=WP_032719294.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mdtM;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014837327.1;locus_tag=PHA56_RS24675;product=multidrug efflux MFS transporter MdtM;protein_id=WP_032719294.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5222618 5223244 . - . ID=gene-PHA56_RS24680;Name=PHA56_RS24680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS24680;old_locus_tag=PHA56_24680 NZ_CP116214.1 Protein Homology CDS 5222618 5223244 . - 0 ID=cds-WP_014227775.1;Parent=gene-PHA56_RS24680;Dbxref=Genbank:WP_014227775.1;Name=WP_014227775.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014837326.1;locus_tag=PHA56_RS24680;product=ParB/RepB/Spo0J family partition protein;protein_id=WP_014227775.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5223244 5224455 . - . ID=gene-PHA56_RS24685;Name=PHA56_RS24685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS24685;old_locus_tag=PHA56_24685 NZ_CP116214.1 Protein Homology CDS 5223244 5224455 . - 0 ID=cds-WP_032693014.1;Parent=gene-PHA56_RS24685;Dbxref=Genbank:WP_032693014.1;Name=WP_032693014.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014837325.1;locus_tag=PHA56_RS24685;product=DUF3440 domain-containing protein;protein_id=WP_032693014.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5224830 5225069 . + . ID=gene-PHA56_RS24690;Name=PHA56_RS24690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS24690;old_locus_tag=PHA56_24690 NZ_CP116214.1 Protein Homology CDS 5224830 5225069 . + 0 ID=cds-WP_009652824.1;Parent=gene-PHA56_RS24690;Dbxref=Genbank:WP_009652824.1;Name=WP_009652824.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224912.1;locus_tag=PHA56_RS24690;product=DUF2164 domain-containing protein;protein_id=WP_009652824.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5225152 5226303 . + . ID=gene-PHA56_RS24695;Name=PHA56_RS24695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS24695;old_locus_tag=PHA56_24695 NZ_CP116214.1 Protein Homology CDS 5225152 5226303 . + 0 ID=cds-WP_032693016.1;Parent=gene-PHA56_RS24695;Dbxref=Genbank:WP_032693016.1;Name=WP_032693016.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224911.1;locus_tag=PHA56_RS24695;product=double-cubane-cluster-containing anaerobic reductase;protein_id=WP_032693016.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5226312 5227079 . + . ID=gene-PHA56_RS24700;Name=yjiL;gbkey=Gene;gene=yjiL;gene_biotype=protein_coding;locus_tag=PHA56_RS24700;old_locus_tag=PHA56_24700 NZ_CP116214.1 Protein Homology CDS 5226312 5227079 . + 0 ID=cds-WP_119834589.1;Parent=gene-PHA56_RS24700;Dbxref=Genbank:WP_119834589.1;Name=WP_119834589.1;Note=YjiL%2C as found in Escherichia coli%2C is a homolog of the activator ATPases of enzymes such as lactoyl-CoA dehydratase%2C (R)-phenyllactate dehydratase%2C and 2-hydroxyisocaproyl-CoA dehydratase. The typical substrate of those enzymes is acyl-CoA with an OH at the beta-position. YjiL is the putative activator for the cognate protein YjiM%2C a putative 2-hydroxyacyl-CoA dehydratase with unknown specificity%2C encoded by the adjacent gene.;gbkey=CDS;gene=yjiL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_218363047.1;locus_tag=PHA56_RS24700;product=putative 2-hydroxyacyl-CoA dehydratase activator YjiL;protein_id=WP_119834589.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5227076 5227330 . + . ID=gene-PHA56_RS24705;Name=PHA56_RS24705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS24705;old_locus_tag=PHA56_24705 NZ_CP116214.1 Protein Homology CDS 5227076 5227330 . + 0 ID=cds-WP_014227770.1;Parent=gene-PHA56_RS24705;Dbxref=Genbank:WP_014227770.1;Name=WP_014227770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014227770.1;locus_tag=PHA56_RS24705;product=DUF3343 domain-containing protein;protein_id=WP_014227770.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5227390 5228493 . - . ID=gene-PHA56_RS24710;Name=PHA56_RS24710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS24710;old_locus_tag=PHA56_24710 NZ_CP116214.1 Protein Homology CDS 5227390 5228493 . - 0 ID=cds-WP_032719298.1;Parent=gene-PHA56_RS24710;Dbxref=Genbank:WP_032719298.1;Name=WP_032719298.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014837322.1;locus_tag=PHA56_RS24710;product=M20 peptidase aminoacylase family protein;protein_id=WP_032719298.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5228514 5228981 . - . ID=gene-PHA56_RS24715;Name=PHA56_RS24715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS24715;old_locus_tag=PHA56_24715 NZ_CP116214.1 Protein Homology CDS 5228514 5228981 . - 0 ID=cds-WP_004128539.1;Parent=gene-PHA56_RS24715;Dbxref=Genbank:WP_004128539.1;Name=WP_004128539.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004098268.1;locus_tag=PHA56_RS24715;product=YjiG family protein;protein_id=WP_004128539.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5228974 5229657 . - . ID=gene-PHA56_RS24720;Name=PHA56_RS24720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS24720;old_locus_tag=PHA56_24720 NZ_CP116214.1 Protein Homology CDS 5228974 5229657 . - 0 ID=cds-WP_014227768.1;Parent=gene-PHA56_RS24720;Dbxref=Genbank:WP_014227768.1;Name=WP_014227768.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020456431.1;locus_tag=PHA56_RS24720;product=nucleoside recognition domain-containing protein;protein_id=WP_014227768.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5229970 5230884 . + . ID=gene-PHA56_RS24725;Name=PHA56_RS24725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS24725;old_locus_tag=PHA56_24725 NZ_CP116214.1 Protein Homology CDS 5229970 5230884 . + 0 ID=cds-WP_004098266.1;Parent=gene-PHA56_RS24725;Dbxref=Genbank:WP_004098266.1;Name=WP_004098266.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004098266.1;locus_tag=PHA56_RS24725;product=LysR substrate-binding domain-containing protein;protein_id=WP_004098266.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5230887 5231951 . - . ID=gene-PHA56_RS24730;Name=PHA56_RS24730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS24730;old_locus_tag=PHA56_24730 NZ_CP116214.1 Protein Homology CDS 5230887 5231951 . - 0 ID=cds-WP_004098265.1;Parent=gene-PHA56_RS24730;Dbxref=Genbank:WP_004098265.1;Name=WP_004098265.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224908.1;locus_tag=PHA56_RS24730;product=DUF2955 domain-containing protein;protein_id=WP_004098265.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5231941 5233008 . - . ID=gene-PHA56_RS24735;Name=PHA56_RS24735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS24735;old_locus_tag=PHA56_24735 NZ_CP116214.1 Protein Homology CDS 5231941 5233008 . - 0 ID=cds-WP_004098264.1;Parent=gene-PHA56_RS24735;Dbxref=Genbank:WP_004098264.1;Name=WP_004098264.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224907.1;locus_tag=PHA56_RS24735;product=HlyD family secretion protein;protein_id=WP_004098264.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5233015 5233479 . - . ID=gene-PHA56_RS24740;Name=PHA56_RS24740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS24740;old_locus_tag=PHA56_24740 NZ_CP116214.1 Protein Homology CDS 5233015 5233479 . - 0 ID=cds-WP_014227766.1;Parent=gene-PHA56_RS24740;Dbxref=Genbank:WP_014227766.1;Name=WP_014227766.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224906.1;locus_tag=PHA56_RS24740;product=MarR family transcriptional regulator;protein_id=WP_014227766.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5233783 5233947 . - . ID=gene-PHA56_RS24745;Name=PHA56_RS24745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS24745;old_locus_tag=PHA56_24745 NZ_CP116214.1 Protein Homology CDS 5233783 5233947 . - 0 ID=cds-WP_004098259.1;Parent=gene-PHA56_RS24745;Dbxref=Genbank:WP_004098259.1;Name=WP_004098259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224905.1;locus_tag=PHA56_RS24745;product=DUF1127 domain-containing protein;protein_id=WP_004098259.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5234125 5235549 . + . ID=gene-PHA56_RS24750;Name=PHA56_RS24750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS24750;old_locus_tag=PHA56_24750 NZ_CP116214.1 Protein Homology CDS 5234125 5235549 . + 0 ID=cds-WP_042944220.1;Parent=gene-PHA56_RS24750;Dbxref=Genbank:WP_042944220.1;Name=WP_042944220.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004098258.1;locus_tag=PHA56_RS24750;product=PLP-dependent aminotransferase family protein;protein_id=WP_042944220.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5235644 5236612 . - . ID=gene-PHA56_RS24755;Name=PHA56_RS24755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS24755;old_locus_tag=PHA56_24755 NZ_CP116214.1 Protein Homology CDS 5235644 5236612 . - 0 ID=cds-WP_042944218.1;Parent=gene-PHA56_RS24755;Dbxref=Genbank:WP_042944218.1;Name=WP_042944218.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017441751.1;locus_tag=PHA56_RS24755;product=hypothetical protein;protein_id=WP_042944218.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5236754 5239183 . + . ID=gene-PHA56_RS24760;Name=PHA56_RS24760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS24760;old_locus_tag=PHA56_24760 NZ_CP116214.1 Protein Homology CDS 5236754 5239183 . + 0 ID=cds-WP_119834587.1;Parent=gene-PHA56_RS24760;Dbxref=Genbank:WP_119834587.1;Name=WP_119834587.1;Ontology_term=GO:0003677,GO:0005524,GO:0016787;gbkey=CDS;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313335.1;locus_tag=PHA56_RS24760;product=DEAD/DEAH box helicase family protein;protein_id=WP_119834587.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5239258 5240727 . + . ID=gene-PHA56_RS24765;Name=PHA56_RS24765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS24765;old_locus_tag=PHA56_24765 NZ_CP116214.1 Protein Homology CDS 5239258 5240727 . + 0 ID=cds-WP_119834586.1;Parent=gene-PHA56_RS24765;Dbxref=Genbank:WP_119834586.1;Name=WP_119834586.1;Ontology_term=GO:0006306,GO:0003677,GO:0008170;gbkey=CDS;go_function=DNA binding|0003677||IEA,N-methyltransferase activity|0008170||IEA;go_process=DNA methylation|0006306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313334.2;locus_tag=PHA56_RS24765;product=N-6 DNA methylase;protein_id=WP_119834586.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5240727 5242451 . + . ID=gene-PHA56_RS24770;Name=PHA56_RS24770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS24770;old_locus_tag=PHA56_24770 NZ_CP116214.1 Protein Homology CDS 5240727 5242451 . + 0 ID=cds-WP_119834585.1;Parent=gene-PHA56_RS24770;Dbxref=Genbank:WP_119834585.1;Name=WP_119834585.1;Ontology_term=GO:0006304,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000110082.1;locus_tag=PHA56_RS24770;product=restriction endonuclease subunit S;protein_id=WP_119834585.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5242668 5243003 . + . ID=gene-PHA56_RS24775;Name=symE;gbkey=Gene;gene=symE;gene_biotype=protein_coding;locus_tag=PHA56_RS24775;old_locus_tag=PHA56_24775 NZ_CP116214.1 Protein Homology CDS 5242668 5243003 . + 0 ID=cds-WP_032719937.1;Parent=gene-PHA56_RS24775;Dbxref=Genbank:WP_032719937.1;Name=WP_032719937.1;gbkey=CDS;gene=symE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014227760.1;locus_tag=PHA56_RS24775;product=endoribonuclease SymE;protein_id=WP_032719937.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5243458 5244369 . + . ID=gene-PHA56_RS24780;Name=PHA56_RS24780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS24780;old_locus_tag=PHA56_24780 NZ_CP116214.1 Protein Homology CDS 5243458 5244369 . + 0 ID=cds-WP_119834584.1;Parent=gene-PHA56_RS24780;Dbxref=Genbank:WP_119834584.1;Name=WP_119834584.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014227759.1;locus_tag=PHA56_RS24780;product=acetamidase/formamidase family protein;protein_id=WP_119834584.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5244366 5245709 . + . ID=gene-PHA56_RS24785;Name=PHA56_RS24785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS24785;old_locus_tag=PHA56_24785 NZ_CP116214.1 Protein Homology CDS 5244366 5245709 . + 0 ID=cds-WP_119834583.1;Parent=gene-PHA56_RS24785;Dbxref=Genbank:WP_119834583.1;Name=WP_119834583.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017145060.1;locus_tag=PHA56_RS24785;product=APC family permease;protein_id=WP_119834583.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5245831 5246133 . - . ID=gene-PHA56_RS24790;Name=PHA56_RS24790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS24790;old_locus_tag=PHA56_24790 NZ_CP116214.1 Protein Homology CDS 5245831 5246133 . - 0 ID=cds-WP_014837314.1;Parent=gene-PHA56_RS24790;Dbxref=Genbank:WP_014837314.1;Name=WP_014837314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463388.1;locus_tag=PHA56_RS24790;product=BrnA antitoxin family protein;protein_id=WP_014837314.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5246120 5246407 . - . ID=gene-PHA56_RS24795;Name=PHA56_RS24795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS24795;old_locus_tag=PHA56_24795 NZ_CP116214.1 Protein Homology CDS 5246120 5246407 . - 0 ID=cds-WP_042933975.1;Parent=gene-PHA56_RS24795;Dbxref=Genbank:WP_042933975.1;Name=WP_042933975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463387.1;locus_tag=PHA56_RS24795;product=BrnT family toxin;protein_id=WP_042933975.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5246657 5247100 . - . ID=gene-PHA56_RS24800;Name=PHA56_RS24800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS24800;old_locus_tag=PHA56_24800 NZ_CP116214.1 Protein Homology CDS 5246657 5247100 . - 0 ID=cds-WP_014837312.1;Parent=gene-PHA56_RS24800;Dbxref=Genbank:WP_014837312.1;Name=WP_014837312.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004108641.1;locus_tag=PHA56_RS24800;product=FosA family fosfomycin resistance glutathione transferase;protein_id=WP_014837312.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5247094 5248002 . - . ID=gene-PHA56_RS24805;Name=PHA56_RS24805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS24805;old_locus_tag=PHA56_24805 NZ_CP116214.1 Protein Homology CDS 5247094 5248002 . - 0 ID=cds-WP_119834582.1;Parent=gene-PHA56_RS24805;Dbxref=Genbank:WP_119834582.1;Name=WP_119834582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224902.1;locus_tag=PHA56_RS24805;product=LysR family transcriptional regulator;protein_id=WP_119834582.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5248090 5248872 . + . ID=gene-PHA56_RS24810;Name=PHA56_RS24810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS24810;old_locus_tag=PHA56_24810 NZ_CP116214.1 Protein Homology CDS 5248090 5248872 . + 0 ID=cds-WP_032693033.1;Parent=gene-PHA56_RS24810;Dbxref=Genbank:WP_032693033.1;Name=WP_032693033.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004108645.1;locus_tag=PHA56_RS24810;product=NAD(P)H-dependent oxidoreductase;protein_id=WP_032693033.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5249020 5249604 . + . ID=gene-PHA56_RS24815;Name=PHA56_RS24815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS24815;old_locus_tag=PHA56_24815 NZ_CP116214.1 Protein Homology CDS 5249020 5249604 . + 0 ID=cds-WP_004098242.1;Parent=gene-PHA56_RS24815;Dbxref=Genbank:WP_004098242.1;Name=WP_004098242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004133049.1;locus_tag=PHA56_RS24815;product=TetR/AcrR family transcriptional regulator;protein_id=WP_004098242.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5249750 5250550 . + . ID=gene-PHA56_RS24820;Name=PHA56_RS24820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS24820;old_locus_tag=PHA56_24820 NZ_CP116214.1 Protein Homology CDS 5249750 5250550 . + 0 ID=cds-WP_014227752.1;Parent=gene-PHA56_RS24820;Dbxref=Genbank:WP_014227752.1;Name=WP_014227752.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004110280.1;locus_tag=PHA56_RS24820;product=winged helix-turn-helix domain-containing protein;protein_id=WP_014227752.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5250547 5251065 . + . ID=gene-PHA56_RS24825;Name=PHA56_RS24825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS24825;old_locus_tag=PHA56_24825 NZ_CP116214.1 Protein Homology CDS 5250547 5251065 . + 0 ID=cds-WP_042944214.1;Parent=gene-PHA56_RS24825;Dbxref=Genbank:WP_042944214.1;Name=WP_042944214.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004108661.1;locus_tag=PHA56_RS24825;product=FidL-like protein;protein_id=WP_042944214.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5251470 5251748 . + . ID=gene-PHA56_RS24830;Name=PHA56_RS24830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS24830;old_locus_tag=PHA56_24830 NZ_CP116214.1 Protein Homology CDS 5251470 5251748 . + 0 ID=cds-WP_004098239.1;Parent=gene-PHA56_RS24830;Dbxref=Genbank:WP_004098239.1;Name=WP_004098239.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249182.1;locus_tag=PHA56_RS24830;product=BMC domain-containing protein;protein_id=WP_004098239.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5251766 5252050 . + . ID=gene-PHA56_RS24835;Name=PHA56_RS24835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS24835;old_locus_tag=PHA56_24835 NZ_CP116214.1 Protein Homology CDS 5251766 5252050 . + 0 ID=cds-WP_004098238.1;Parent=gene-PHA56_RS24835;Dbxref=Genbank:WP_004098238.1;Name=WP_004098238.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002442227.1;locus_tag=PHA56_RS24835;product=BMC domain-containing protein;protein_id=WP_004098238.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5252066 5252344 . + . ID=gene-PHA56_RS24840;Name=PHA56_RS24840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS24840;old_locus_tag=PHA56_24840 NZ_CP116214.1 Protein Homology CDS 5252066 5252344 . + 0 ID=cds-WP_002442217.1;Parent=gene-PHA56_RS24840;Dbxref=Genbank:WP_002442217.1;Name=WP_002442217.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249182.1;locus_tag=PHA56_RS24840;product=BMC domain-containing protein;protein_id=WP_002442217.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5252398 5254002 . + . ID=gene-PHA56_RS24845;Name=PHA56_RS24845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS24845;old_locus_tag=PHA56_24845 NZ_CP116214.1 Protein Homology CDS 5252398 5254002 . + 0 ID=cds-WP_032719932.1;Parent=gene-PHA56_RS24845;Dbxref=Genbank:WP_032719932.1;Name=WP_032719932.1;Ontology_term=GO:0016620;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000570989.1;locus_tag=PHA56_RS24845;product=acetaldehyde dehydrogenase (acetylating);protein_id=WP_032719932.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5254029 5254286 . + . ID=gene-PHA56_RS24850;Name=PHA56_RS24850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS24850;old_locus_tag=PHA56_24850 NZ_CP116214.1 Protein Homology CDS 5254029 5254286 . + 0 ID=cds-WP_004098229.1;Parent=gene-PHA56_RS24850;Dbxref=Genbank:WP_004098229.1;Name=WP_004098229.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004146127.1;locus_tag=PHA56_RS24850;product=EutN/CcmL family microcompartment protein;protein_id=WP_004098229.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5254302 5255456 . + . ID=gene-PHA56_RS24855;Name=PHA56_RS24855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS24855;old_locus_tag=PHA56_24855 NZ_CP116214.1 Protein Homology CDS 5254302 5255456 . + 0 ID=cds-WP_014227750.1;Parent=gene-PHA56_RS24855;Dbxref=Genbank:WP_014227750.1;Name=WP_014227750.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016807796.1;locus_tag=PHA56_RS24855;product=iron-containing alcohol dehydrogenase;protein_id=WP_014227750.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5255482 5258868 . + . ID=gene-PHA56_RS24860;Name=cutC;gbkey=Gene;gene=cutC;gene_biotype=protein_coding;locus_tag=PHA56_RS24860;old_locus_tag=PHA56_24860 NZ_CP116214.1 Protein Homology CDS 5255482 5258868 . + 0 ID=cds-WP_014227749.1;Parent=gene-PHA56_RS24860;Dbxref=Genbank:WP_014227749.1;Name=WP_014227749.1;Ontology_term=GO:0042426,GO:0016840;gbkey=CDS;gene=cutC;go_function=carbon-nitrogen lyase activity|0016840||IEA;go_process=choline catabolic process|0042426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004182805.1;locus_tag=PHA56_RS24860;product=choline trimethylamine-lyase;protein_id=WP_014227749.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5258925 5259872 . + . ID=gene-PHA56_RS24865;Name=cutD;gbkey=Gene;gene=cutD;gene_biotype=protein_coding;locus_tag=PHA56_RS24865;old_locus_tag=PHA56_24865 NZ_CP116214.1 Protein Homology CDS 5258925 5259872 . + 0 ID=cds-WP_038424020.1;Parent=gene-PHA56_RS24865;Dbxref=Genbank:WP_038424020.1;Name=WP_038424020.1;Ontology_term=GO:0042426,GO:0043687,GO:0051539,GO:1904047;gbkey=CDS;gene=cutD;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=choline catabolic process|0042426||IEA,post-translational protein modification|0043687||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020316596.1;locus_tag=PHA56_RS24865;product=choline TMA-lyase-activating enzyme;protein_id=WP_038424020.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5259885 5260307 . + . ID=gene-PHA56_RS24870;Name=PHA56_RS24870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS24870;old_locus_tag=PHA56_24870 NZ_CP116214.1 Protein Homology CDS 5259885 5260307 . + 0 ID=cds-WP_038424019.1;Parent=gene-PHA56_RS24870;Dbxref=Genbank:WP_038424019.1;Name=WP_038424019.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009486241.1;locus_tag=PHA56_RS24870;product=BMC domain-containing protein;protein_id=WP_038424019.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5260304 5260924 . + . ID=gene-PHA56_RS24875;Name=PHA56_RS24875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS24875;old_locus_tag=PHA56_24875 NZ_CP116214.1 Protein Homology CDS 5260304 5260924 . + 0 ID=cds-WP_004098222.1;Parent=gene-PHA56_RS24875;Dbxref=Genbank:WP_004098222.1;Name=WP_004098222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009652887.1;locus_tag=PHA56_RS24875;product=phosphate propanoyltransferase;protein_id=WP_004098222.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5260937 5261623 . + . ID=gene-PHA56_RS24880;Name=PHA56_RS24880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS24880;old_locus_tag=PHA56_24880 NZ_CP116214.1 Protein Homology CDS 5260937 5261623 . + 0 ID=cds-WP_038424018.1;Parent=gene-PHA56_RS24880;Dbxref=Genbank:WP_038424018.1;Name=WP_038424018.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014837301.1;locus_tag=PHA56_RS24880;product=hypothetical protein;protein_id=WP_038424018.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5261643 5262056 . + . ID=gene-PHA56_RS24885;Name=PHA56_RS24885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS24885;old_locus_tag=PHA56_24885 NZ_CP116214.1 Protein Homology CDS 5261643 5262056 . + 0 ID=cds-WP_014227744.1;Parent=gene-PHA56_RS24885;Dbxref=Genbank:WP_014227744.1;Name=WP_014227744.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012542991.1;locus_tag=PHA56_RS24885;product=multidrug efflux SMR transporter;protein_id=WP_014227744.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5262074 5262403 . + . ID=gene-PHA56_RS24890;Name=PHA56_RS24890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS24890;old_locus_tag=PHA56_24890 NZ_CP116214.1 Protein Homology CDS 5262074 5262403 . + 0 ID=cds-WP_004108688.1;Parent=gene-PHA56_RS24890;Dbxref=Genbank:WP_004108688.1;Name=WP_004108688.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011705235.1;locus_tag=PHA56_RS24890;product=multidrug efflux SMR transporter;protein_id=WP_004108688.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5262645 5262740 . + . ID=gene-PHA56_RS24895;Name=tnaC;gbkey=Gene;gene=tnaC;gene_biotype=protein_coding;locus_tag=PHA56_RS24895;old_locus_tag=PHA56_24895 NZ_CP116214.1 Protein Homology CDS 5262645 5262740 . + 0 ID=cds-WP_004098218.1;Parent=gene-PHA56_RS24895;Dbxref=Genbank:WP_004098218.1;Name=WP_004098218.1;Ontology_term=GO:0006569,GO:0031554,GO:0031556;gbkey=CDS;gene=tnaC;go_process=tryptophan catabolic process|0006569||IEA,regulation of termination of DNA-templated transcription|0031554||IEA,transcriptional attenuation by ribosome|0031556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004098218.1;locus_tag=PHA56_RS24895;product=tryptophanase leader peptide;protein_id=WP_004098218.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5262865 5264253 . + . ID=gene-PHA56_RS24900;Name=tnaA;gbkey=Gene;gene=tnaA;gene_biotype=protein_coding;locus_tag=PHA56_RS24900;old_locus_tag=PHA56_24900 NZ_CP116214.1 Protein Homology CDS 5262865 5264253 . + 0 ID=cds-WP_004098213.1;Parent=gene-PHA56_RS24900;Dbxref=Genbank:WP_004098213.1;Name=WP_004098213.1;Ontology_term=GO:0006568,GO:0009034;gbkey=CDS;gene=tnaA;go_function=tryptophanase activity|0009034||IEA;go_process=tryptophan metabolic process|0006568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004098213.1;locus_tag=PHA56_RS24900;product=tryptophanase;protein_id=WP_004098213.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5264392 5265648 . + . ID=gene-PHA56_RS24905;Name=mtr;gbkey=Gene;gene=mtr;gene_biotype=protein_coding;locus_tag=PHA56_RS24905;old_locus_tag=PHA56_24905 NZ_CP116214.1 Protein Homology CDS 5264392 5265648 . + 0 ID=cds-WP_004098211.1;Parent=gene-PHA56_RS24905;Dbxref=Genbank:WP_004098211.1;Name=WP_004098211.1;Ontology_term=GO:0015801,GO:0015173,GO:0005886;gbkey=CDS;gene=mtr;go_component=plasma membrane|0005886||IEA;go_function=aromatic amino acid transmembrane transporter activity|0015173||IEA;go_process=aromatic amino acid transport|0015801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417630.1;locus_tag=PHA56_RS24905;product=tryptophan permease;protein_id=WP_004098211.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5265855 5266862 . + . ID=gene-PHA56_RS24910;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=PHA56_RS24910;old_locus_tag=PHA56_24910 NZ_CP116214.1 Protein Homology CDS 5265855 5266862 . + 0 ID=cds-WP_038424017.1;Parent=gene-PHA56_RS24910;Dbxref=Genbank:WP_038424017.1;Name=WP_038424017.1;Ontology_term=GO:0006436,GO:0004830,GO:0005737;gbkey=CDS;gene=trpS;go_component=cytoplasm|0005737||IEA;go_function=tryptophan-tRNA ligase activity|0004830||IEA;go_process=tryptophanyl-tRNA aminoacylation|0006436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224896.1;locus_tag=PHA56_RS24910;product=tryptophan--tRNA ligase;protein_id=WP_038424017.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5267267 5268664 . - . ID=gene-PHA56_RS24915;Name=PHA56_RS24915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS24915;old_locus_tag=PHA56_24915 NZ_CP116214.1 Protein Homology CDS 5267267 5268664 . - 0 ID=cds-WP_038424016.1;Parent=gene-PHA56_RS24915;Dbxref=Genbank:WP_038424016.1;Name=WP_038424016.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009652888.1;locus_tag=PHA56_RS24915;product=GGDEF domain-containing protein;protein_id=WP_038424016.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5269188 5270255 . + . ID=gene-PHA56_RS24920;Name=PHA56_RS24920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS24920;old_locus_tag=PHA56_24920 NZ_CP116214.1 Protein Homology CDS 5269188 5270255 . + 0 ID=cds-WP_119834746.1;Parent=gene-PHA56_RS24920;Dbxref=Genbank:WP_119834746.1;Name=WP_119834746.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224895.1;locus_tag=PHA56_RS24920;product=HlyD family efflux transporter periplasmic adaptor subunit;protein_id=WP_119834746.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5270252 5272981 . + . ID=gene-PHA56_RS24925;Name=rbbA;gbkey=Gene;gene=rbbA;gene_biotype=protein_coding;locus_tag=PHA56_RS24925;old_locus_tag=PHA56_24925 NZ_CP116214.1 Protein Homology CDS 5270252 5272981 . + 0 ID=cds-WP_038424015.1;Parent=gene-PHA56_RS24925;Dbxref=Genbank:WP_038424015.1;Name=WP_038424015.1;Ontology_term=GO:0055085,GO:0005524,GO:0042626,GO:0016020,GO:0043190;gbkey=CDS;gene=rbbA;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014227740.1;locus_tag=PHA56_RS24925;product=ribosome-associated ATPase/putative transporter RbbA;protein_id=WP_038424015.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5272981 5274105 . + . ID=gene-PHA56_RS24930;Name=PHA56_RS24930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS24930;old_locus_tag=PHA56_24930 NZ_CP116214.1 Protein Homology CDS 5272981 5274105 . + 0 ID=cds-WP_032719924.1;Parent=gene-PHA56_RS24930;Dbxref=Genbank:WP_032719924.1;Name=WP_032719924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224893.1;locus_tag=PHA56_RS24930;product=ABC transporter permease;protein_id=WP_032719924.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5274145 5274462 . - . ID=gene-PHA56_RS24935;Name=PHA56_RS24935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS24935;old_locus_tag=PHA56_24935 NZ_CP116214.1 Protein Homology CDS 5274145 5274462 . - 0 ID=cds-WP_014227738.1;Parent=gene-PHA56_RS24935;Dbxref=Genbank:WP_014227738.1;Name=WP_014227738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224892.1;locus_tag=PHA56_RS24935;product=hypothetical protein;protein_id=WP_014227738.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5275131 5275246 . - . ID=gene-PHA56_RS24940;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=PHA56_RS24940;old_locus_tag=PHA56_24940 NZ_CP116214.1 cmsearch rRNA 5275131 5275246 . - . ID=rna-PHA56_RS24940;Parent=gene-PHA56_RS24940;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA56_RS24940;product=5S ribosomal RNA NZ_CP116214.1 cmsearch exon 5275131 5275246 . - . ID=exon-PHA56_RS24940-1;Parent=rna-PHA56_RS24940;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA56_RS24940;product=5S ribosomal RNA NZ_CP116214.1 RefSeq gene 5275447 5278352 . - . ID=gene-PHA56_RS24945;Name=PHA56_RS24945;gbkey=Gene;gene_biotype=rRNA;locus_tag=PHA56_RS24945;old_locus_tag=PHA56_24945 NZ_CP116214.1 cmsearch rRNA 5275447 5278352 . - . ID=rna-PHA56_RS24945;Parent=gene-PHA56_RS24945;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA56_RS24945;product=23S ribosomal RNA NZ_CP116214.1 cmsearch exon 5275447 5278352 . - . ID=exon-PHA56_RS24945-1;Parent=rna-PHA56_RS24945;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA56_RS24945;product=23S ribosomal RNA NZ_CP116214.1 RefSeq gene 5278543 5278617 . - . ID=gene-PHA56_RS24950;Name=PHA56_RS24950;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA56_RS24950;old_locus_tag=PHA56_24950 NZ_CP116214.1 tRNAscan-SE tRNA 5278543 5278617 . - . ID=rna-PHA56_RS24950;Parent=gene-PHA56_RS24950;anticodon=(pos:complement(5278582..5278584));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS24950;product=tRNA-Glu NZ_CP116214.1 tRNAscan-SE exon 5278543 5278617 . - . ID=exon-PHA56_RS24950-1;Parent=rna-PHA56_RS24950;anticodon=(pos:complement(5278582..5278584));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS24950;product=tRNA-Glu NZ_CP116214.1 RefSeq gene 5278705 5280244 . - . ID=gene-PHA56_RS24955;Name=PHA56_RS24955;gbkey=Gene;gene_biotype=rRNA;locus_tag=PHA56_RS24955;old_locus_tag=PHA56_24955 NZ_CP116214.1 cmsearch rRNA 5278705 5280244 . - . ID=rna-PHA56_RS24955;Parent=gene-PHA56_RS24955;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA56_RS24955;product=16S ribosomal RNA NZ_CP116214.1 cmsearch exon 5278705 5280244 . - . ID=exon-PHA56_RS24955-1;Parent=rna-PHA56_RS24955;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA56_RS24955;product=16S ribosomal RNA NZ_CP116214.1 RefSeq gene 5280848 5281972 . + . ID=gene-PHA56_RS24960;Name=PHA56_RS24960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS24960;old_locus_tag=PHA56_24960 NZ_CP116214.1 Protein Homology CDS 5280848 5281972 . + 0 ID=cds-WP_014227737.1;Parent=gene-PHA56_RS24960;Dbxref=Genbank:WP_014227737.1;Name=WP_014227737.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224890.1;locus_tag=PHA56_RS24960;product=cupin domain-containing protein;protein_id=WP_014227737.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5282039 5282914 . - . ID=gene-PHA56_RS24965;Name=surE;gbkey=Gene;gene=surE;gene_biotype=protein_coding;locus_tag=PHA56_RS24965;old_locus_tag=PHA56_24965 NZ_CP116214.1 Protein Homology CDS 5282039 5282914 . - 0 ID=cds-WP_038424014.1;Parent=gene-PHA56_RS24965;Dbxref=Genbank:WP_038424014.1;Name=WP_038424014.1;Ontology_term=GO:0006950,GO:0008253,GO:0008254;gbkey=CDS;gene=surE;go_function=5'-nucleotidase activity|0008253||IEA,3'-nucleotidase activity|0008254||IEA;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004108710.1;locus_tag=PHA56_RS24965;product=5'/3'-nucleotidase SurE;protein_id=WP_038424014.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5283410 5284189 . + . ID=gene-PHA56_RS24970;Name=PHA56_RS24970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS24970;old_locus_tag=PHA56_24970 NZ_CP116214.1 Protein Homology CDS 5283410 5284189 . + 0 ID=cds-WP_032720882.1;Parent=gene-PHA56_RS24970;Dbxref=Genbank:WP_032720882.1;Name=WP_032720882.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004108712.1;locus_tag=PHA56_RS24970;product=histidine phosphatase family protein;protein_id=WP_032720882.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5284274 5285617 . + . ID=gene-PHA56_RS24975;Name=PHA56_RS24975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS24975;old_locus_tag=PHA56_24975 NZ_CP116214.1 Protein Homology CDS 5284274 5285617 . + 0 ID=cds-WP_009654447.1;Parent=gene-PHA56_RS24975;Dbxref=Genbank:WP_009654447.1;Name=WP_009654447.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016809988.1;locus_tag=PHA56_RS24975;product=OprD family outer membrane porin;protein_id=WP_009654447.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5285659 5287026 . - . ID=gene-PHA56_RS24980;Name=PHA56_RS24980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS24980;old_locus_tag=PHA56_24980 NZ_CP116214.1 Protein Homology CDS 5285659 5287026 . - 0 ID=cds-WP_223226809.1;Parent=gene-PHA56_RS24980;Dbxref=Genbank:WP_223226809.1;Name=WP_223226809.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004117635.1;locus_tag=PHA56_RS24980;product=MFS transporter;protein_id=WP_223226809.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5287589 5289238 . + . ID=gene-PHA56_RS24985;Name=PHA56_RS24985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS24985;old_locus_tag=PHA56_24985 NZ_CP116214.1 Protein Homology CDS 5287589 5289238 . + 0 ID=cds-WP_049082209.1;Parent=gene-PHA56_RS24985;Dbxref=Genbank:WP_049082209.1;Name=WP_049082209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014227731.1;locus_tag=PHA56_RS24985;product=signal transduction protein;protein_id=WP_049082209.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5289383 5290834 . + . ID=gene-PHA56_RS24990;Name=PHA56_RS24990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS24990;old_locus_tag=PHA56_24990 NZ_CP116214.1 Protein Homology CDS 5289383 5290834 . + 0 ID=cds-WP_014227730.1;Parent=gene-PHA56_RS24990;Dbxref=Genbank:WP_014227730.1;Name=WP_014227730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014227730.1;locus_tag=PHA56_RS24990;product=MFS transporter;protein_id=WP_014227730.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5290887 5291990 . + . ID=gene-PHA56_RS24995;Name=PHA56_RS24995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS24995;old_locus_tag=PHA56_24995 NZ_CP116214.1 Protein Homology CDS 5290887 5291990 . + 0 ID=cds-WP_032694266.1;Parent=gene-PHA56_RS24995;Dbxref=Genbank:WP_032694266.1;Name=WP_032694266.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002437660.1;locus_tag=PHA56_RS24995;product=mandelate racemase/muconate lactonizing enzyme family protein;protein_id=WP_032694266.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5292014 5292841 . + . ID=gene-PHA56_RS25000;Name=PHA56_RS25000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS25000;old_locus_tag=PHA56_25000 NZ_CP116214.1 Protein Homology CDS 5292014 5292841 . + 0 ID=cds-WP_119834724.1;Parent=gene-PHA56_RS25000;Dbxref=Genbank:WP_119834724.1;Name=WP_119834724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004133472.1;locus_tag=PHA56_RS25000;product=SDR family oxidoreductase;protein_id=WP_119834724.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5292835 5293746 . + . ID=gene-PHA56_RS25005;Name=PHA56_RS25005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS25005;old_locus_tag=PHA56_25005 NZ_CP116214.1 Protein Homology CDS 5292835 5293746 . + 0 ID=cds-WP_032720885.1;Parent=gene-PHA56_RS25005;Dbxref=Genbank:WP_032720885.1;Name=WP_032720885.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016809992.1;locus_tag=PHA56_RS25005;product=dihydrodipicolinate synthase family protein;protein_id=WP_032720885.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5293733 5294110 . + . ID=gene-PHA56_RS25010;Name=PHA56_RS25010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS25010;old_locus_tag=PHA56_25010 NZ_CP116214.1 Protein Homology CDS 5293733 5294110 . + 0 ID=cds-WP_119834725.1;Parent=gene-PHA56_RS25010;Dbxref=Genbank:WP_119834725.1;Name=WP_119834725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001610775.1;locus_tag=PHA56_RS25010;product=heme-binding protein;protein_id=WP_119834725.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5294250 5295260 . - . ID=gene-PHA56_RS25015;Name=PHA56_RS25015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS25015;old_locus_tag=PHA56_25015 NZ_CP116214.1 Protein Homology CDS 5294250 5295260 . - 0 ID=cds-WP_171820355.1;Parent=gene-PHA56_RS25015;Dbxref=Genbank:WP_171820355.1;Name=WP_171820355.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004117622.1;locus_tag=PHA56_RS25015;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_171820355.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5295471 5296502 . - . ID=gene-PHA56_RS25020;Name=PHA56_RS25020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS25020;old_locus_tag=PHA56_25020 NZ_CP116214.1 Protein Homology CDS 5295471 5296502 . - 0 ID=cds-WP_042944197.1;Parent=gene-PHA56_RS25020;Dbxref=Genbank:WP_042944197.1;Name=WP_042944197.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014837287.1;locus_tag=PHA56_RS25020;product=DUF1176 domain-containing protein;protein_id=WP_042944197.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5296886 5297680 . + . ID=gene-PHA56_RS25025;Name=PHA56_RS25025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS25025;old_locus_tag=PHA56_25025 NZ_CP116214.1 Protein Homology CDS 5296886 5297680 . + 0 ID=cds-WP_038424010.1;Parent=gene-PHA56_RS25025;Dbxref=Genbank:WP_038424010.1;Name=WP_038424010.1;Ontology_term=GO:0003676,GO:0016787,GO:0046872;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004128380.1;locus_tag=PHA56_RS25025;product=DNA/RNA non-specific endonuclease;protein_id=WP_038424010.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5297970 5298293 . + . ID=gene-PHA56_RS25030;Name=symE;gbkey=Gene;gene=symE;gene_biotype=protein_coding;locus_tag=PHA56_RS25030;old_locus_tag=PHA56_25030 NZ_CP116214.1 Protein Homology CDS 5297970 5298293 . + 0 ID=cds-WP_032747696.1;Parent=gene-PHA56_RS25030;Dbxref=Genbank:WP_032747696.1;Name=WP_032747696.1;gbkey=CDS;gene=symE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016808135.1;locus_tag=PHA56_RS25030;product=endoribonuclease SymE;protein_id=WP_032747696.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5298440 5298874 . + . ID=gene-PHA56_RS25035;Name=PHA56_RS25035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS25035;old_locus_tag=PHA56_25035 NZ_CP116214.1 Protein Homology CDS 5298440 5298874 . + 0 ID=cds-WP_004098173.1;Parent=gene-PHA56_RS25035;Dbxref=Genbank:WP_004098173.1;Name=WP_004098173.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004117617.1;locus_tag=PHA56_RS25035;product=VOC family protein;protein_id=WP_004098173.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5299040 5299795 . + . ID=gene-PHA56_RS25040;Name=PHA56_RS25040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS25040;old_locus_tag=PHA56_25040 NZ_CP116214.1 Protein Homology CDS 5299040 5299795 . + 0 ID=cds-WP_223226808.1;Parent=gene-PHA56_RS25040;Dbxref=Genbank:WP_223226808.1;Name=WP_223226808.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004098172.1;locus_tag=PHA56_RS25040;product=hypothetical protein;protein_id=WP_223226808.1;transl_table=11 NZ_CP116214.1 RefSeq pseudogene 5299841 5300678 . + . ID=gene-PHA56_RS25045;Name=PHA56_RS25045;end_range=5300678,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS25045;old_locus_tag=PHA56_25045;partial=true;pseudo=true NZ_CP116214.1 Protein Homology CDS 5299841 5300678 . + 0 ID=cds-PHA56_RS25045;Parent=gene-PHA56_RS25045;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=5300678,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612266.1;locus_tag=PHA56_RS25045;partial=true;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_CP116214.1 RefSeq gene 5300778 5301758 . + . ID=gene-PHA56_RS25050;Name=PHA56_RS25050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS25050;old_locus_tag=PHA56_25050 NZ_CP116214.1 Protein Homology CDS 5300778 5301758 . + 0 ID=cds-WP_000019473.1-3;Parent=gene-PHA56_RS25050;Dbxref=Genbank:WP_000019473.1;Name=WP_000019473.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000019445.1;locus_tag=PHA56_RS25050;product=IS5-like element ISKpn26 family transposase;protein_id=WP_000019473.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5301797 5302402 . - . ID=gene-PHA56_RS25055;Name=PHA56_RS25055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS25055;old_locus_tag=PHA56_25055 NZ_CP116214.1 Protein Homology CDS 5301797 5302402 . - 0 ID=cds-WP_271292939.1;Parent=gene-PHA56_RS25055;Dbxref=Genbank:WP_271292939.1;Name=WP_271292939.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024977.2;locus_tag=PHA56_RS25055;product=ATP-binding protein;protein_id=WP_271292939.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5302405 5303664 . - . ID=gene-PHA56_RS25060;Name=PHA56_RS25060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS25060;old_locus_tag=PHA56_25060 NZ_CP116214.1 Protein Homology CDS 5302405 5303664 . - 0 ID=cds-WP_088168470.1;Parent=gene-PHA56_RS25060;Dbxref=Genbank:WP_088168470.1;Name=WP_088168470.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012372.2;locus_tag=PHA56_RS25060;product=DNA cytosine methyltransferase;protein_id=WP_088168470.1;transl_table=11 NZ_CP116214.1 RefSeq pseudogene 5304004 5305260 . - . ID=gene-PHA56_RS25065;Name=PHA56_RS25065;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS25065;old_locus_tag=PHA56_25065;pseudo=true NZ_CP116214.1 Protein Homology CDS 5304004 5305260 . - 0 ID=cds-PHA56_RS25065;Parent=gene-PHA56_RS25065;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004168117.1;locus_tag=PHA56_RS25065;product=integrase arm-type DNA-binding domain-containing protein;pseudo=true;transl_table=11 NZ_CP116214.1 RefSeq gene 5305459 5305543 . - . ID=gene-PHA56_RS25070;Name=PHA56_RS25070;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA56_RS25070;old_locus_tag=PHA56_25070 NZ_CP116214.1 tRNAscan-SE tRNA 5305459 5305543 . - . ID=rna-PHA56_RS25070;Parent=gene-PHA56_RS25070;anticodon=(pos:complement(5305507..5305509));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS25070;product=tRNA-Leu NZ_CP116214.1 tRNAscan-SE exon 5305459 5305543 . - . ID=exon-PHA56_RS25070-1;Parent=rna-PHA56_RS25070;anticodon=(pos:complement(5305507..5305509));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS25070;product=tRNA-Leu NZ_CP116214.1 RefSeq gene 5305851 5306864 . + . ID=gene-PHA56_RS25075;Name=PHA56_RS25075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS25075;old_locus_tag=PHA56_25075 NZ_CP116214.1 Protein Homology CDS 5305851 5306864 . + 0 ID=cds-WP_004128309.1;Parent=gene-PHA56_RS25075;Dbxref=Genbank:WP_004128309.1;Name=WP_004128309.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004128309.1;locus_tag=PHA56_RS25075;product=HNH endonuclease domain-containing protein;protein_id=WP_004128309.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5306864 5307442 . + . ID=gene-PHA56_RS25080;Name=PHA56_RS25080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS25080;old_locus_tag=PHA56_25080 NZ_CP116214.1 Protein Homology CDS 5306864 5307442 . + 0 ID=cds-WP_119834730.1;Parent=gene-PHA56_RS25080;Dbxref=Genbank:WP_119834730.1;Name=WP_119834730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004117584.1;locus_tag=PHA56_RS25080;product=class I SAM-dependent methyltransferase;protein_id=WP_119834730.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5307582 5308601 . + . ID=gene-PHA56_RS25085;Name=PHA56_RS25085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS25085;old_locus_tag=PHA56_25085 NZ_CP116214.1 Protein Homology CDS 5307582 5308601 . + 0 ID=cds-WP_004108819.1;Parent=gene-PHA56_RS25085;Dbxref=Genbank:WP_004108819.1;Name=WP_004108819.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224837.1;locus_tag=PHA56_RS25085;product=NAD(P)-dependent alcohol dehydrogenase;protein_id=WP_004108819.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5308792 5309664 . + . ID=gene-PHA56_RS25090;Name=PHA56_RS25090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS25090;old_locus_tag=PHA56_25090 NZ_CP116214.1 Protein Homology CDS 5308792 5309664 . + 0 ID=cds-WP_271292940.1;Parent=gene-PHA56_RS25090;Dbxref=Genbank:WP_271292940.1;Name=WP_271292940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016808117.1;locus_tag=PHA56_RS25090;product=sugar ABC transporter permease;protein_id=WP_271292940.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5309654 5310541 . + . ID=gene-PHA56_RS25095;Name=PHA56_RS25095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS25095;old_locus_tag=PHA56_25095 NZ_CP116214.1 Protein Homology CDS 5309654 5310541 . + 0 ID=cds-WP_119834731.1;Parent=gene-PHA56_RS25095;Dbxref=Genbank:WP_119834731.1;Name=WP_119834731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224835.1;locus_tag=PHA56_RS25095;product=carbohydrate ABC transporter permease;protein_id=WP_119834731.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5310552 5311376 . + . ID=gene-PHA56_RS25100;Name=PHA56_RS25100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS25100;old_locus_tag=PHA56_25100 NZ_CP116214.1 Protein Homology CDS 5310552 5311376 . + 0 ID=cds-WP_032718883.1;Parent=gene-PHA56_RS25100;Dbxref=Genbank:WP_032718883.1;Name=WP_032718883.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004128299.1;locus_tag=PHA56_RS25100;product=phosphodiesterase;protein_id=WP_032718883.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5311382 5312455 . + . ID=gene-PHA56_RS25105;Name=PHA56_RS25105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS25105;old_locus_tag=PHA56_25105 NZ_CP116214.1 Protein Homology CDS 5311382 5312455 . + 0 ID=cds-WP_014227685.1;Parent=gene-PHA56_RS25105;Dbxref=Genbank:WP_014227685.1;Name=WP_014227685.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224833.1;locus_tag=PHA56_RS25105;product=ABC transporter ATP-binding protein;protein_id=WP_014227685.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5312448 5313758 . + . ID=gene-PHA56_RS25110;Name=PHA56_RS25110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS25110;old_locus_tag=PHA56_25110 NZ_CP116214.1 Protein Homology CDS 5312448 5313758 . + 0 ID=cds-WP_014227684.1;Parent=gene-PHA56_RS25110;Dbxref=Genbank:WP_014227684.1;Name=WP_014227684.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224832.1;locus_tag=PHA56_RS25110;product=ABC transporter substrate-binding protein;protein_id=WP_014227684.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5313935 5315434 . - . ID=gene-PHA56_RS25115;Name=PHA56_RS25115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS25115;old_locus_tag=PHA56_25115 NZ_CP116214.1 Protein Homology CDS 5313935 5315434 . - 0 ID=cds-WP_014227683.1;Parent=gene-PHA56_RS25115;Dbxref=Genbank:WP_014227683.1;Name=WP_014227683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004108837.1;locus_tag=PHA56_RS25115;product=sugar porter family MFS transporter;protein_id=WP_014227683.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5315603 5316502 . - . ID=gene-PHA56_RS25120;Name=iolE;gbkey=Gene;gene=iolE;gene_biotype=protein_coding;locus_tag=PHA56_RS25120;old_locus_tag=PHA56_25120 NZ_CP116214.1 Protein Homology CDS 5315603 5316502 . - 0 ID=cds-WP_004098147.1;Parent=gene-PHA56_RS25120;Dbxref=Genbank:WP_004098147.1;Name=WP_004098147.1;Ontology_term=GO:0019310,GO:0050114;gbkey=CDS;gene=iolE;go_function=myo-inosose-2 dehydratase activity|0050114||IEA;go_process=inositol catabolic process|0019310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224831.1;locus_tag=PHA56_RS25120;product=myo-inosose-2 dehydratase;protein_id=WP_004098147.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5316528 5317412 . - . ID=gene-PHA56_RS25125;Name=PHA56_RS25125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS25125;old_locus_tag=PHA56_25125 NZ_CP116214.1 Protein Homology CDS 5316528 5317412 . - 0 ID=cds-WP_004098146.1;Parent=gene-PHA56_RS25125;Dbxref=Genbank:WP_004098146.1;Name=WP_004098146.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224830.1;locus_tag=PHA56_RS25125;product=sugar phosphate isomerase/epimerase;protein_id=WP_004098146.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5317454 5318467 . - . ID=gene-PHA56_RS25130;Name=PHA56_RS25130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS25130;old_locus_tag=PHA56_25130 NZ_CP116214.1 Protein Homology CDS 5317454 5318467 . - 0 ID=cds-WP_004098145.1;Parent=gene-PHA56_RS25130;Dbxref=Genbank:WP_004098145.1;Name=WP_004098145.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224829.1;locus_tag=PHA56_RS25130;product=Gfo/Idh/MocA family oxidoreductase;protein_id=WP_004098145.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5318516 5320456 . - . ID=gene-PHA56_RS25135;Name=iolD;gbkey=Gene;gene=iolD;gene_biotype=protein_coding;locus_tag=PHA56_RS25135;old_locus_tag=PHA56_25135 NZ_CP116214.1 Protein Homology CDS 5318516 5320456 . - 0 ID=cds-WP_014227682.1;Parent=gene-PHA56_RS25135;Dbxref=Genbank:WP_014227682.1;Name=WP_014227682.1;Ontology_term=GO:0019310,GO:0000287,GO:0016823,GO:0030976;gbkey=CDS;gene=iolD;go_function=magnesium ion binding|0000287||IEA,hydrolase activity%2C acting on acid carbon-carbon bonds%2C in ketonic substances|0016823||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=inositol catabolic process|0019310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224828.1;locus_tag=PHA56_RS25135;product=3D-(3%2C5/4)-trihydroxycyclohexane-1%2C2-dione acylhydrolase (decyclizing);protein_id=WP_014227682.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5320982 5322895 . + . ID=gene-PHA56_RS25140;Name=iolC;gbkey=Gene;gene=iolC;gene_biotype=protein_coding;locus_tag=PHA56_RS25140;old_locus_tag=PHA56_25140 NZ_CP116214.1 Protein Homology CDS 5320982 5322895 . + 0 ID=cds-WP_189087343.1;Parent=gene-PHA56_RS25140;Dbxref=Genbank:WP_189087343.1;Name=WP_189087343.1;Ontology_term=GO:0019310,GO:0047590;gbkey=CDS;gene=iolC;go_function=5-dehydro-2-deoxygluconokinase activity|0047590||IEA;go_process=inositol catabolic process|0019310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015368535.1;locus_tag=PHA56_RS25140;product=5-dehydro-2-deoxygluconokinase;protein_id=WP_189087343.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5323047 5323904 . + . ID=gene-PHA56_RS25145;Name=PHA56_RS25145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS25145;old_locus_tag=PHA56_25145 NZ_CP116214.1 Protein Homology CDS 5323047 5323904 . + 0 ID=cds-WP_004098142.1;Parent=gene-PHA56_RS25145;Dbxref=Genbank:WP_004098142.1;Name=WP_004098142.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224825.1;locus_tag=PHA56_RS25145;product=MurR/RpiR family transcriptional regulator;protein_id=WP_004098142.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5324569 5325378 . - . ID=gene-PHA56_RS25150;Name=iolB;gbkey=Gene;gene=iolB;gene_biotype=protein_coding;locus_tag=PHA56_RS25150;old_locus_tag=PHA56_25150 NZ_CP116214.1 Protein Homology CDS 5324569 5325378 . - 0 ID=cds-WP_014227680.1;Parent=gene-PHA56_RS25150;Dbxref=Genbank:WP_014227680.1;Name=WP_014227680.1;Ontology_term=GO:0019310,GO:0016861;gbkey=CDS;gene=iolB;go_function=intramolecular oxidoreductase activity%2C interconverting aldoses and ketoses|0016861||IEA;go_process=inositol catabolic process|0019310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224824.1;locus_tag=PHA56_RS25150;product=5-deoxy-glucuronate isomerase;protein_id=WP_014227680.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5325397 5326902 . - . ID=gene-PHA56_RS25155;Name=PHA56_RS25155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS25155;old_locus_tag=PHA56_25155 NZ_CP116214.1 Protein Homology CDS 5325397 5326902 . - 0 ID=cds-WP_014837226.1;Parent=gene-PHA56_RS25155;Dbxref=Genbank:WP_014837226.1;Name=WP_014837226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224823.1;locus_tag=PHA56_RS25155;product=CoA-acylating methylmalonate-semialdehyde dehydrogenase;protein_id=WP_014837226.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5327264 5328085 . + . ID=gene-PHA56_RS25160;Name=PHA56_RS25160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS25160;old_locus_tag=PHA56_25160 NZ_CP116214.1 Protein Homology CDS 5327264 5328085 . + 0 ID=cds-WP_032695177.1;Parent=gene-PHA56_RS25160;Dbxref=Genbank:WP_032695177.1;Name=WP_032695177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224822.1;locus_tag=PHA56_RS25160;product=TIM barrel protein;protein_id=WP_032695177.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5328172 5329674 . + . ID=gene-PHA56_RS25165;Name=PHA56_RS25165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS25165;old_locus_tag=PHA56_25165 NZ_CP116214.1 Protein Homology CDS 5328172 5329674 . + 0 ID=cds-WP_014227677.1;Parent=gene-PHA56_RS25165;Dbxref=Genbank:WP_014227677.1;Name=WP_014227677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224821.1;locus_tag=PHA56_RS25165;product=DUF853 domain-containing protein;protein_id=WP_014227677.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5329716 5330798 . - . ID=gene-PHA56_RS25170;Name=lptG;gbkey=Gene;gene=lptG;gene_biotype=protein_coding;locus_tag=PHA56_RS25170;old_locus_tag=PHA56_25170 NZ_CP116214.1 Protein Homology CDS 5329716 5330798 . - 0 ID=cds-WP_014227676.1;Parent=gene-PHA56_RS25170;Dbxref=Genbank:WP_014227676.1;Name=WP_014227676.1;Ontology_term=GO:0015920,GO:0015221,GO:0005886;gbkey=CDS;gene=lptG;go_component=plasma membrane|0005886||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=lipopolysaccharide transport|0015920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463340.1;locus_tag=PHA56_RS25170;product=LPS export ABC transporter permease LptG;protein_id=WP_014227676.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5330798 5331895 . - . ID=gene-PHA56_RS25175;Name=lptF;gbkey=Gene;gene=lptF;gene_biotype=protein_coding;locus_tag=PHA56_RS25175;old_locus_tag=PHA56_25175 NZ_CP116214.1 Protein Homology CDS 5330798 5331895 . - 0 ID=cds-WP_004098132.1;Parent=gene-PHA56_RS25175;Dbxref=Genbank:WP_004098132.1;Name=WP_004098132.1;Ontology_term=GO:0015920,GO:0015221,GO:0005886;gbkey=CDS;gene=lptF;go_component=plasma membrane|0005886||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=lipopolysaccharide transport|0015920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224819.1;locus_tag=PHA56_RS25175;product=LPS export ABC transporter permease LptF;protein_id=WP_004098132.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5332289 5333800 . + . ID=gene-PHA56_RS25180;Name=pepA;gbkey=Gene;gene=pepA;gene_biotype=protein_coding;locus_tag=PHA56_RS25180;old_locus_tag=PHA56_25180 NZ_CP116214.1 Protein Homology CDS 5332289 5333800 . + 0 ID=cds-WP_004098131.1;Parent=gene-PHA56_RS25180;Dbxref=Genbank:WP_004098131.1;Name=WP_004098131.1;Ontology_term=GO:0006508,GO:0019538,GO:0030145,GO:0070006;gbkey=CDS;gene=pepA;go_function=manganese ion binding|0030145||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA,protein metabolic process|0019538||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224818.1;locus_tag=PHA56_RS25180;product=leucyl aminopeptidase;protein_id=WP_004098131.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5333923 5334366 . + . ID=gene-PHA56_RS25185;Name=holC;gbkey=Gene;gene=holC;gene_biotype=protein_coding;locus_tag=PHA56_RS25185;old_locus_tag=PHA56_25185 NZ_CP116214.1 Protein Homology CDS 5333923 5334366 . + 0 ID=cds-WP_004098129.1;Parent=gene-PHA56_RS25185;Dbxref=Genbank:WP_004098129.1;Name=WP_004098129.1;gbkey=CDS;gene=holC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004098129.1;locus_tag=PHA56_RS25185;product=DNA polymerase III subunit chi;protein_id=WP_004098129.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5334366 5337221 . + . ID=gene-PHA56_RS25190;Name=PHA56_RS25190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS25190;old_locus_tag=PHA56_25190 NZ_CP116214.1 Protein Homology CDS 5334366 5337221 . + 0 ID=cds-WP_047683943.1;Parent=gene-PHA56_RS25190;Dbxref=Genbank:WP_047683943.1;Name=WP_047683943.1;Ontology_term=GO:0006438,GO:0000166,GO:0004812,GO:0004832,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,valine-tRNA ligase activity|0004832||IEA,ATP binding|0005524||IEA;go_process=valyl-tRNA aminoacylation|0006438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000416368.1;locus_tag=PHA56_RS25190;product=valine--tRNA ligase;protein_id=WP_047683943.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5337344 5337847 . + . ID=gene-PHA56_RS25195;Name=PHA56_RS25195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS25195;old_locus_tag=PHA56_25195 NZ_CP116214.1 Protein Homology CDS 5337344 5337847 . + 0 ID=cds-WP_004098126.1;Parent=gene-PHA56_RS25195;Dbxref=Genbank:WP_004098126.1;Name=WP_004098126.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004098126.1;locus_tag=PHA56_RS25195;product=GNAT family N-acetyltransferase;protein_id=WP_004098126.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5338000 5339022 . + . ID=gene-PHA56_RS25200;Name=PHA56_RS25200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS25200;old_locus_tag=PHA56_25200 NZ_CP116214.1 Protein Homology CDS 5338000 5339022 . + 0 ID=cds-WP_042944155.1;Parent=gene-PHA56_RS25200;Dbxref=Genbank:WP_042944155.1;Name=WP_042944155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014227674.1;locus_tag=PHA56_RS25200;product=alpha/beta hydrolase;protein_id=WP_042944155.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5339063 5339821 . - . ID=gene-PHA56_RS25205;Name=miaE;gbkey=Gene;gene=miaE;gene_biotype=protein_coding;locus_tag=PHA56_RS25205;old_locus_tag=PHA56_25205 NZ_CP116214.1 Protein Homology CDS 5339063 5339821 . - 0 ID=cds-WP_014227673.1;Parent=gene-PHA56_RS25205;Dbxref=Genbank:WP_014227673.1;Name=WP_014227673.1;Ontology_term=GO:0006400,GO:0045301;gbkey=CDS;gene=miaE;go_function=tRNA-(2-methylthio-N-6-(cis-hydroxy)isopentenyl adenosine)-hydroxylase activity|0045301||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004098123.1;locus_tag=PHA56_RS25205;product=tRNA isopentenyl-2-thiomethyl-A-37 hydroxylase MiaE;protein_id=WP_014227673.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5339874 5340299 . - . ID=gene-PHA56_RS25210;Name=rraB;gbkey=Gene;gene=rraB;gene_biotype=protein_coding;locus_tag=PHA56_RS25210;old_locus_tag=PHA56_25210 NZ_CP116214.1 Protein Homology CDS 5339874 5340299 . - 0 ID=cds-WP_004098122.1;Parent=gene-PHA56_RS25210;Dbxref=Genbank:WP_004098122.1;Name=WP_004098122.1;gbkey=CDS;gene=rraB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463330.1;locus_tag=PHA56_RS25210;product=ribonuclease E inhibitor RraB;protein_id=WP_004098122.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5340464 5341468 . + . ID=gene-PHA56_RS25215;Name=argF;gbkey=Gene;gene=argF;gene_biotype=protein_coding;locus_tag=PHA56_RS25215;old_locus_tag=PHA56_25215 NZ_CP116214.1 Protein Homology CDS 5340464 5341468 . + 0 ID=cds-WP_014227672.1;Parent=gene-PHA56_RS25215;Dbxref=Genbank:WP_014227672.1;Name=WP_014227672.1;Ontology_term=GO:0042450,GO:0004585;gbkey=CDS;gene=argF;go_function=ornithine carbamoyltransferase activity|0004585||IEA;go_process=arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224812.1;locus_tag=PHA56_RS25215;product=ornithine carbamoyltransferase;protein_id=WP_014227672.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5341580 5342032 . - . ID=gene-PHA56_RS25220;Name=PHA56_RS25220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS25220;old_locus_tag=PHA56_25220 NZ_CP116214.1 Protein Homology CDS 5341580 5342032 . - 0 ID=cds-WP_014227671.1;Parent=gene-PHA56_RS25220;Dbxref=Genbank:WP_014227671.1;Name=WP_014227671.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017900567.1;locus_tag=PHA56_RS25220;product=YhcH/YjgK/YiaL family protein;protein_id=WP_014227671.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5342225 5342329 . + . ID=gene-PHA56_RS25225;Name=PHA56_RS25225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS25225;old_locus_tag=PHA56_25225 NZ_CP116214.1 Protein Homology CDS 5342225 5342329 . + 0 ID=cds-WP_072351778.1;Parent=gene-PHA56_RS25225;Dbxref=Genbank:WP_072351778.1;Name=WP_072351778.1;Ontology_term=GO:0019856;gbkey=CDS;go_process=pyrimidine nucleobase biosynthetic process|0019856||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009652331.1;locus_tag=PHA56_RS25225;product=pyrBI operon leader peptide;protein_id=WP_072351778.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5342366 5343301 . + . ID=gene-PHA56_RS25230;Name=pyrB;gbkey=Gene;gene=pyrB;gene_biotype=protein_coding;locus_tag=PHA56_RS25230;old_locus_tag=PHA56_25230 NZ_CP116214.1 Protein Homology CDS 5342366 5343301 . + 0 ID=cds-WP_014227670.1;Parent=gene-PHA56_RS25230;Dbxref=Genbank:WP_014227670.1;Name=WP_014227670.1;Ontology_term=GO:0009220,GO:0004070;gbkey=CDS;gene=pyrB;go_function=aspartate carbamoyltransferase activity|0004070||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224804.1;locus_tag=PHA56_RS25230;product=aspartate carbamoyltransferase;protein_id=WP_014227670.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5343313 5343774 . + . ID=gene-PHA56_RS25235;Name=pyrI;gbkey=Gene;gene=pyrI;gene_biotype=protein_coding;locus_tag=PHA56_RS25235;old_locus_tag=PHA56_25235 NZ_CP116214.1 Protein Homology CDS 5343313 5343774 . + 0 ID=cds-WP_004098115.1;Parent=gene-PHA56_RS25235;Dbxref=Genbank:WP_004098115.1;Name=WP_004098115.1;Ontology_term=GO:0009220,GO:0004070;gbkey=CDS;gene=pyrI;go_function=aspartate carbamoyltransferase activity|0004070||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000148566.1;locus_tag=PHA56_RS25235;product=aspartate carbamoyltransferase regulatory subunit;protein_id=WP_004098115.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5344035 5345504 . + . ID=gene-PHA56_RS25240;Name=gbpA;gbkey=Gene;gene=gbpA;gene_biotype=protein_coding;locus_tag=PHA56_RS25240;old_locus_tag=PHA56_25240 NZ_CP116214.1 Protein Homology CDS 5344035 5345504 . + 0 ID=cds-WP_038423978.1;Parent=gene-PHA56_RS25240;Dbxref=Genbank:WP_038423978.1;Name=WP_038423978.1;gbkey=CDS;gene=gbpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014837222.1;locus_tag=PHA56_RS25240;product=N-acetylglucosamine-binding protein GbpA;protein_id=WP_038423978.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5345659 5346045 . + . ID=gene-PHA56_RS25245;Name=ridA;gbkey=Gene;gene=ridA;gene_biotype=protein_coding;locus_tag=PHA56_RS25245;old_locus_tag=PHA56_25245 NZ_CP116214.1 Protein Homology CDS 5345659 5346045 . + 0 ID=cds-WP_009652347.1;Parent=gene-PHA56_RS25245;Dbxref=Genbank:WP_009652347.1;Name=WP_009652347.1;gbkey=CDS;gene=ridA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418664.2;locus_tag=PHA56_RS25245;product=2-iminobutanoate/2-iminopropanoate deaminase;protein_id=WP_009652347.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5346113 5348821 . - . ID=gene-PHA56_RS25250;Name=mgtA;gbkey=Gene;gene=mgtA;gene_biotype=protein_coding;locus_tag=PHA56_RS25250;old_locus_tag=PHA56_25250 NZ_CP116214.1 Protein Homology CDS 5346113 5348821 . - 0 ID=cds-WP_014227668.1;Parent=gene-PHA56_RS25250;Dbxref=Genbank:WP_014227668.1;Name=WP_014227668.1;Ontology_term=GO:0015693,GO:0015444;gbkey=CDS;gene=mgtA;go_function=P-type magnesium transporter activity|0015444||IEA;go_process=magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224801.1;locus_tag=PHA56_RS25250;product=magnesium-translocating P-type ATPase;protein_id=WP_014227668.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5349200 5350147 . + . ID=gene-PHA56_RS25255;Name=treR;gbkey=Gene;gene=treR;gene_biotype=protein_coding;locus_tag=PHA56_RS25255;old_locus_tag=PHA56_25255 NZ_CP116214.1 Protein Homology CDS 5349200 5350147 . + 0 ID=cds-WP_014227667.1;Parent=gene-PHA56_RS25255;Dbxref=Genbank:WP_014227667.1;Name=WP_014227667.1;Ontology_term=GO:0005975,GO:0006355,GO:0003700;gbkey=CDS;gene=treR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=carbohydrate metabolic process|0005975||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224800.1;locus_tag=PHA56_RS25255;product=trehalose operon repressor TreR;protein_id=WP_014227667.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5350276 5351694 . + . ID=gene-PHA56_RS25260;Name=treB;gbkey=Gene;gene=treB;gene_biotype=protein_coding;locus_tag=PHA56_RS25260;old_locus_tag=PHA56_25260 NZ_CP116214.1 Protein Homology CDS 5350276 5351694 . + 0 ID=cds-WP_014227666.1;Parent=gene-PHA56_RS25260;Dbxref=Genbank:WP_014227666.1;Name=WP_014227666.1;Ontology_term=GO:0009401,GO:0015771,GO:0008982,GO:0015574,GO:0016020;gbkey=CDS;gene=treB;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,trehalose transmembrane transporter activity|0015574||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,trehalose transport|0015771||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224799.1;locus_tag=PHA56_RS25260;product=PTS trehalose transporter subunit IIBC;protein_id=WP_014227666.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5351749 5353404 . + . ID=gene-PHA56_RS25265;Name=treC;gbkey=Gene;gene=treC;gene_biotype=protein_coding;locus_tag=PHA56_RS25265;old_locus_tag=PHA56_25265 NZ_CP116214.1 Protein Homology CDS 5351749 5353404 . + 0 ID=cds-WP_025107456.1;Parent=gene-PHA56_RS25265;Dbxref=Genbank:WP_025107456.1;Name=WP_025107456.1;Ontology_term=GO:0005991,GO:0008788;gbkey=CDS;gene=treC;go_function=alpha%2Calpha-phosphotrehalase activity|0008788||IEA;go_process=trehalose metabolic process|0005991||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014837218.1;locus_tag=PHA56_RS25265;product=alpha%2Calpha-phosphotrehalase;protein_id=WP_025107456.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5353524 5354879 . - . ID=gene-PHA56_RS25270;Name=celB;gbkey=Gene;gene=celB;gene_biotype=protein_coding;locus_tag=PHA56_RS25270;old_locus_tag=PHA56_25270 NZ_CP116214.1 Protein Homology CDS 5353524 5354879 . - 0 ID=cds-WP_014227664.1;Parent=gene-PHA56_RS25270;Dbxref=Genbank:WP_014227664.1;Name=WP_014227664.1;Ontology_term=GO:0009401,GO:0008982,GO:0019191;gbkey=CDS;gene=celB;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,cellobiose transmembrane transporter activity|0019191||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014227664.1;locus_tag=PHA56_RS25270;product=PTS cellobiose transporter subunit IIC;protein_id=WP_014227664.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5354906 5356213 . - . ID=gene-PHA56_RS25275;Name=PHA56_RS25275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS25275;old_locus_tag=PHA56_25275 NZ_CP116214.1 Protein Homology CDS 5354906 5356213 . - 0 ID=cds-WP_032718874.1;Parent=gene-PHA56_RS25275;Dbxref=Genbank:WP_032718874.1;Name=WP_032718874.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224796.1;locus_tag=PHA56_RS25275;product=6-phospho-beta-glucosidase;protein_id=WP_032718874.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5356293 5356556 . - . ID=gene-PHA56_RS25280;Name=PHA56_RS25280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS25280;old_locus_tag=PHA56_25280 NZ_CP116214.1 Protein Homology CDS 5356293 5356556 . - 0 ID=cds-WP_231718934.1;Parent=gene-PHA56_RS25280;Dbxref=Genbank:WP_231718934.1;Name=WP_231718934.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014227662.1;locus_tag=PHA56_RS25280;product=PTS sugar transporter subunit IIB;protein_id=WP_231718934.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5356862 5357605 . + . ID=gene-PHA56_RS25285;Name=PHA56_RS25285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS25285;old_locus_tag=PHA56_25285 NZ_CP116214.1 Protein Homology CDS 5356862 5357605 . + 0 ID=cds-WP_032695179.1;Parent=gene-PHA56_RS25285;Dbxref=Genbank:WP_032695179.1;Name=WP_032695179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020079793.1;locus_tag=PHA56_RS25285;product=MurR/RpiR family transcriptional regulator;protein_id=WP_032695179.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5357976 5360114 . + . ID=gene-PHA56_RS25290;Name=nrdD;gbkey=Gene;gene=nrdD;gene_biotype=protein_coding;locus_tag=PHA56_RS25290;old_locus_tag=PHA56_25290 NZ_CP116214.1 Protein Homology CDS 5357976 5360114 . + 0 ID=cds-WP_032747666.1;Parent=gene-PHA56_RS25290;Dbxref=Genbank:WP_032747666.1;Name=WP_032747666.1;Ontology_term=GO:0006260,GO:0008998;gbkey=CDS;gene=nrdD;go_function=ribonucleoside-triphosphate reductase activity|0008998||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224791.1;locus_tag=PHA56_RS25290;product=anaerobic ribonucleoside-triphosphate reductase;protein_id=WP_032747666.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5360437 5360901 . + . ID=gene-PHA56_RS25295;Name=nrdG;gbkey=Gene;gene=nrdG;gene_biotype=protein_coding;locus_tag=PHA56_RS25295;old_locus_tag=PHA56_25295 NZ_CP116214.1 Protein Homology CDS 5360437 5360901 . + 0 ID=cds-WP_014227659.1;Parent=gene-PHA56_RS25295;Dbxref=Genbank:WP_014227659.1;Name=WP_014227659.1;Ontology_term=GO:0043365,GO:0051539;gbkey=CDS;gene=nrdG;go_function=[formate-C-acetyltransferase]-activating enzyme activity|0043365||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224790.1;locus_tag=PHA56_RS25295;product=anaerobic ribonucleoside-triphosphate reductase-activating protein;protein_id=WP_014227659.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5360919 5362751 . - . ID=gene-PHA56_RS25300;Name=tssI;gbkey=Gene;gene=tssI;gene_biotype=protein_coding;locus_tag=PHA56_RS25300;old_locus_tag=PHA56_25300 NZ_CP116214.1 Protein Homology CDS 5360919 5362751 . - 0 ID=cds-WP_042944145.1;Parent=gene-PHA56_RS25300;Dbxref=Genbank:WP_042944145.1;Name=WP_042944145.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssI;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016155560.1;locus_tag=PHA56_RS25300;product=type VI secretion system tip protein TssI/VgrG;protein_id=WP_042944145.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5362942 5363427 . - . ID=gene-PHA56_RS25305;Name=PHA56_RS25305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS25305;old_locus_tag=PHA56_25305 NZ_CP116214.1 Protein Homology CDS 5362942 5363427 . - 0 ID=cds-WP_042944144.1;Parent=gene-PHA56_RS25305;Dbxref=Genbank:WP_042944144.1;Name=WP_042944144.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004137212.1;locus_tag=PHA56_RS25305;product=Hcp family type VI secretion system effector;protein_id=WP_042944144.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5364003 5364395 . + . ID=gene-PHA56_RS25310;Name=PHA56_RS25310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS25310;old_locus_tag=PHA56_25310 NZ_CP116214.1 Protein Homology CDS 5364003 5364395 . + 0 ID=cds-WP_071889420.1;Parent=gene-PHA56_RS25310;Dbxref=Genbank:WP_071889420.1;Name=WP_071889420.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016155543.1;locus_tag=PHA56_RS25310;product=DUF4280 domain-containing protein;protein_id=WP_071889420.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5364450 5366360 . - . ID=gene-PHA56_RS25315;Name=PHA56_RS25315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS25315;old_locus_tag=PHA56_25315 NZ_CP116214.1 Protein Homology CDS 5364450 5366360 . - 0 ID=cds-WP_076752460.1;Parent=gene-PHA56_RS25315;Dbxref=Genbank:WP_076752460.1;Name=WP_076752460.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224787.1;locus_tag=PHA56_RS25315;product=PRD domain-containing protein;protein_id=WP_076752460.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5366383 5367534 . - . ID=gene-PHA56_RS25320;Name=PHA56_RS25320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS25320;old_locus_tag=PHA56_25320 NZ_CP116214.1 Protein Homology CDS 5366383 5367534 . - 0 ID=cds-WP_042944142.1;Parent=gene-PHA56_RS25320;Dbxref=Genbank:WP_042944142.1;Name=WP_042944142.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224786.1;locus_tag=PHA56_RS25320;product=lactonase family protein;protein_id=WP_042944142.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5367622 5368362 . - . ID=gene-PHA56_RS25325;Name=PHA56_RS25325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS25325;old_locus_tag=PHA56_25325 NZ_CP116214.1 Protein Homology CDS 5367622 5368362 . - 0 ID=cds-WP_032695167.1;Parent=gene-PHA56_RS25325;Dbxref=Genbank:WP_032695167.1;Name=WP_032695167.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224785.1;locus_tag=PHA56_RS25325;product=KDGP aldolase family protein;protein_id=WP_032695167.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5368359 5369477 . - . ID=gene-PHA56_RS25330;Name=PHA56_RS25330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS25330;old_locus_tag=PHA56_25330 NZ_CP116214.1 Protein Homology CDS 5368359 5369477 . - 0 ID=cds-WP_032695166.1;Parent=gene-PHA56_RS25330;Dbxref=Genbank:WP_032695166.1;Name=WP_032695166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224784.1;locus_tag=PHA56_RS25330;product=DgaE family pyridoxal phosphate-dependent ammonia lyase;protein_id=WP_032695166.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5369461 5370594 . - . ID=gene-PHA56_RS25335;Name=PHA56_RS25335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS25335;old_locus_tag=PHA56_25335 NZ_CP116214.1 Protein Homology CDS 5369461 5370594 . - 0 ID=cds-WP_032695165.1;Parent=gene-PHA56_RS25335;Dbxref=Genbank:WP_032695165.1;Name=WP_032695165.1;Ontology_term=GO:0008150,GO:0003674,GO:0005575;gbkey=CDS;go_component=cellular_component|0005575||IEA;go_function=molecular_function|0003674||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224783.1;locus_tag=PHA56_RS25335;product=amidohydrolase/deacetylase family metallohydrolase;protein_id=WP_032695165.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5370637 5371281 . - . ID=gene-PHA56_RS25340;Name=PHA56_RS25340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS25340;old_locus_tag=PHA56_25340 NZ_CP116214.1 Protein Homology CDS 5370637 5371281 . - 0 ID=cds-WP_004098076.1;Parent=gene-PHA56_RS25340;Dbxref=Genbank:WP_004098076.1;Name=WP_004098076.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224782.1;locus_tag=PHA56_RS25340;product=DUF4310 family protein;protein_id=WP_004098076.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5371294 5372070 . - . ID=gene-PHA56_RS25345;Name=PHA56_RS25345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS25345;old_locus_tag=PHA56_25345 NZ_CP116214.1 Protein Homology CDS 5371294 5372070 . - 0 ID=cds-WP_004098075.1;Parent=gene-PHA56_RS25345;Dbxref=Genbank:WP_004098075.1;Name=WP_004098075.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224781.1;locus_tag=PHA56_RS25345;product=DUF4311 domain-containing protein;protein_id=WP_004098075.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5372092 5372391 . - . ID=gene-PHA56_RS25350;Name=PHA56_RS25350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS25350;old_locus_tag=PHA56_25350 NZ_CP116214.1 Protein Homology CDS 5372092 5372391 . - 0 ID=cds-WP_004098073.1;Parent=gene-PHA56_RS25350;Dbxref=Genbank:WP_004098073.1;Name=WP_004098073.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224780.1;locus_tag=PHA56_RS25350;product=DUF4312 family protein;protein_id=WP_004098073.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5372394 5372756 . - . ID=gene-PHA56_RS25355;Name=PHA56_RS25355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS25355;old_locus_tag=PHA56_25355 NZ_CP116214.1 Protein Homology CDS 5372394 5372756 . - 0 ID=cds-WP_004098072.1;Parent=gene-PHA56_RS25355;Dbxref=Genbank:WP_004098072.1;Name=WP_004098072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224779.1;locus_tag=PHA56_RS25355;product=SFCGS family glycine-rich protein;protein_id=WP_004098072.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5372768 5373106 . - . ID=gene-PHA56_RS25360;Name=PHA56_RS25360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS25360;old_locus_tag=PHA56_25360 NZ_CP116214.1 Protein Homology CDS 5372768 5373106 . - 0 ID=cds-WP_004098070.1;Parent=gene-PHA56_RS25360;Dbxref=Genbank:WP_004098070.1;Name=WP_004098070.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224778.1;locus_tag=PHA56_RS25360;product=PRD domain-containing protein;protein_id=WP_004098070.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5373398 5373784 . - . ID=gene-PHA56_RS25365;Name=cybC;gbkey=Gene;gene=cybC;gene_biotype=protein_coding;locus_tag=PHA56_RS25365;old_locus_tag=PHA56_25365 NZ_CP116214.1 Protein Homology CDS 5373398 5373784 . - 0 ID=cds-WP_032695164.1;Parent=gene-PHA56_RS25365;Dbxref=Genbank:WP_032695164.1;Name=WP_032695164.1;Ontology_term=GO:0022900,GO:0005506,GO:0009055,GO:0042597;gbkey=CDS;gene=cybC;go_component=periplasmic space|0042597||IEA;go_function=iron ion binding|0005506||IEA,electron transfer activity|0009055||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224776.1;locus_tag=PHA56_RS25365;product=cytochrome b562;protein_id=WP_032695164.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5373821 5375173 . - . ID=gene-PHA56_RS25370;Name=pmbA;gbkey=Gene;gene=pmbA;gene_biotype=protein_coding;locus_tag=PHA56_RS25370;old_locus_tag=PHA56_25370 NZ_CP116214.1 Protein Homology CDS 5373821 5375173 . - 0 ID=cds-WP_004098067.1;Parent=gene-PHA56_RS25370;Dbxref=Genbank:WP_004098067.1;Name=WP_004098067.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=pmbA;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313239.1;locus_tag=PHA56_RS25370;product=metalloprotease PmbA;protein_id=WP_004098067.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5375268 5375819 . + . ID=gene-PHA56_RS25375;Name=PHA56_RS25375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS25375;old_locus_tag=PHA56_25375 NZ_CP116214.1 Protein Homology CDS 5375268 5375819 . + 0 ID=cds-WP_004098062.1;Parent=gene-PHA56_RS25375;Dbxref=Genbank:WP_004098062.1;Name=WP_004098062.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224774.1;locus_tag=PHA56_RS25375;product=ribosome biogenesis factor YjgA;protein_id=WP_004098062.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5376456 5377967 . + . ID=gene-PHA56_RS25380;Name=PHA56_RS25380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS25380;old_locus_tag=PHA56_25380 NZ_CP116214.1 Protein Homology CDS 5376456 5377967 . + 0 ID=cds-WP_004098061.1;Parent=gene-PHA56_RS25380;Dbxref=Genbank:WP_004098061.1;Name=WP_004098061.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004871025.1;locus_tag=PHA56_RS25380;product=CoA-acylating methylmalonate-semialdehyde dehydrogenase;protein_id=WP_004098061.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5378162 5379304 . + . ID=gene-PHA56_RS25385;Name=PHA56_RS25385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS25385;old_locus_tag=PHA56_25385 NZ_CP116214.1 Protein Homology CDS 5378162 5379304 . + 0 ID=cds-WP_014837210.1;Parent=gene-PHA56_RS25385;Dbxref=Genbank:WP_014837210.1;Name=WP_014837210.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014227649.1;locus_tag=PHA56_RS25385;product=iron-containing alcohol dehydrogenase;protein_id=WP_014837210.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5379631 5380839 . + . ID=gene-PHA56_RS25390;Name=PHA56_RS25390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS25390;old_locus_tag=PHA56_25390 NZ_CP116214.1 Protein Homology CDS 5379631 5380839 . + 0 ID=cds-WP_014227648.1;Parent=gene-PHA56_RS25390;Dbxref=Genbank:WP_014227648.1;Name=WP_014227648.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224772.1;locus_tag=PHA56_RS25390;product=aldose 1-epimerase family protein;protein_id=WP_014227648.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5381092 5381637 . - . ID=gene-PHA56_RS25395;Name=PHA56_RS25395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS25395;old_locus_tag=PHA56_25395 NZ_CP116214.1 Protein Homology CDS 5381092 5381637 . - 0 ID=cds-WP_014227647.1;Parent=gene-PHA56_RS25395;Dbxref=Genbank:WP_014227647.1;Name=WP_014227647.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014227647.1;locus_tag=PHA56_RS25395;product=GNAT family N-acetyltransferase;protein_id=WP_014227647.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5381702 5383075 . - . ID=gene-PHA56_RS25400;Name=mpl;gbkey=Gene;gene=mpl;gene_biotype=protein_coding;locus_tag=PHA56_RS25400;old_locus_tag=PHA56_25400 NZ_CP116214.1 Protein Homology CDS 5381702 5383075 . - 0 ID=cds-WP_004098056.1;Parent=gene-PHA56_RS25400;Dbxref=Genbank:WP_004098056.1;Name=WP_004098056.1;Ontology_term=GO:0009252,GO:0016881;gbkey=CDS;gene=mpl;go_function=acid-amino acid ligase activity|0016881||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224770.1;locus_tag=PHA56_RS25400;product=UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase;protein_id=WP_004098056.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5383251 5384249 . + . ID=gene-PHA56_RS25405;Name=fbp;gbkey=Gene;gene=fbp;gene_biotype=protein_coding;locus_tag=PHA56_RS25405;old_locus_tag=PHA56_25405 NZ_CP116214.1 Protein Homology CDS 5383251 5384249 . + 0 ID=cds-WP_004098053.1;Parent=gene-PHA56_RS25405;Dbxref=Genbank:WP_004098053.1;Name=WP_004098053.1;Ontology_term=GO:0005975,GO:0042132;gbkey=CDS;gene=fbp;go_function=fructose 1%2C6-bisphosphate 1-phosphatase activity|0042132||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016233757.1;locus_tag=PHA56_RS25405;product=class 1 fructose-bisphosphatase;protein_id=WP_004098053.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5384294 5385280 . - . ID=gene-PHA56_RS25410;Name=yjfF;gbkey=Gene;gene=yjfF;gene_biotype=protein_coding;locus_tag=PHA56_RS25410;old_locus_tag=PHA56_25410 NZ_CP116214.1 Protein Homology CDS 5384294 5385280 . - 0 ID=cds-WP_004098052.1;Parent=gene-PHA56_RS25410;Dbxref=Genbank:WP_004098052.1;Name=WP_004098052.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=yjfF;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004128182.1;locus_tag=PHA56_RS25410;product=sugar ABC transporter permease YjfF;protein_id=WP_004098052.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5385267 5386292 . - . ID=gene-PHA56_RS25415;Name=PHA56_RS25415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS25415;old_locus_tag=PHA56_25415 NZ_CP116214.1 Protein Homology CDS 5385267 5386292 . - 0 ID=cds-WP_014227645.1;Parent=gene-PHA56_RS25415;Dbxref=Genbank:WP_014227645.1;Name=WP_014227645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224767.1;locus_tag=PHA56_RS25415;product=ABC transporter permease;protein_id=WP_014227645.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5386303 5387805 . - . ID=gene-PHA56_RS25420;Name=PHA56_RS25420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS25420;old_locus_tag=PHA56_25420 NZ_CP116214.1 Protein Homology CDS 5386303 5387805 . - 0 ID=cds-WP_014837206.1;Parent=gene-PHA56_RS25420;Dbxref=Genbank:WP_014837206.1;Name=WP_014837206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224766.1;locus_tag=PHA56_RS25420;product=sugar ABC transporter ATP-binding protein;protein_id=WP_014837206.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5387915 5388871 . - . ID=gene-PHA56_RS25425;Name=PHA56_RS25425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS25425;old_locus_tag=PHA56_25425 NZ_CP116214.1 Protein Homology CDS 5387915 5388871 . - 0 ID=cds-WP_004098043.1;Parent=gene-PHA56_RS25425;Dbxref=Genbank:WP_004098043.1;Name=WP_004098043.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313232.1;locus_tag=PHA56_RS25425;product=substrate-binding domain-containing protein;protein_id=WP_004098043.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5389275 5389802 . + . ID=gene-PHA56_RS25430;Name=ppa;gbkey=Gene;gene=ppa;gene_biotype=protein_coding;locus_tag=PHA56_RS25430;old_locus_tag=PHA56_25430 NZ_CP116214.1 Protein Homology CDS 5389275 5389802 . + 0 ID=cds-WP_004098041.1;Parent=gene-PHA56_RS25430;Dbxref=Genbank:WP_004098041.1;Name=WP_004098041.1;Ontology_term=GO:0006796,GO:0004427;gbkey=CDS;gene=ppa;go_function=inorganic diphosphate phosphatase activity|0004427||IEA;go_process=phosphate-containing compound metabolic process|0006796||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134479.1;locus_tag=PHA56_RS25430;product=inorganic diphosphatase;protein_id=WP_004098041.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5389954 5390298 . - . ID=gene-PHA56_RS25435;Name=PHA56_RS25435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS25435;old_locus_tag=PHA56_25435 NZ_CP116214.1 Protein Homology CDS 5389954 5390298 . - 0 ID=cds-WP_004098039.1;Parent=gene-PHA56_RS25435;Dbxref=Genbank:WP_004098039.1;Name=WP_004098039.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012907370.1;locus_tag=PHA56_RS25435;product=gamma-glutamylcyclotransferase;protein_id=WP_004098039.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5390301 5394077 . - . ID=gene-PHA56_RS25440;Name=tamB;gbkey=Gene;gene=tamB;gene_biotype=protein_coding;locus_tag=PHA56_RS25440;old_locus_tag=PHA56_25440 NZ_CP116214.1 Protein Homology CDS 5390301 5394077 . - 0 ID=cds-WP_014227643.1;Parent=gene-PHA56_RS25440;Dbxref=Genbank:WP_014227643.1;Name=WP_014227643.1;gbkey=CDS;gene=tamB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224759.1;locus_tag=PHA56_RS25440;product=autotransporter assembly complex protein TamB;protein_id=WP_014227643.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5394074 5395807 . - . ID=gene-PHA56_RS25445;Name=tamA;gbkey=Gene;gene=tamA;gene_biotype=protein_coding;locus_tag=PHA56_RS25445;old_locus_tag=PHA56_25445 NZ_CP116214.1 Protein Homology CDS 5394074 5395807 . - 0 ID=cds-WP_014227642.1;Parent=gene-PHA56_RS25445;Dbxref=Genbank:WP_014227642.1;Name=WP_014227642.1;gbkey=CDS;gene=tamA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224758.1;locus_tag=PHA56_RS25445;product=autotransporter assembly complex protein TamA;protein_id=WP_014227642.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5396017 5396655 . + . ID=gene-PHA56_RS25450;Name=msrA;gbkey=Gene;gene=msrA;gene_biotype=protein_coding;locus_tag=PHA56_RS25450;old_locus_tag=PHA56_25450 NZ_CP116214.1 Protein Homology CDS 5396017 5396655 . + 0 ID=cds-WP_014227641.1;Parent=gene-PHA56_RS25450;Dbxref=Genbank:WP_014227641.1;Name=WP_014227641.1;Ontology_term=GO:0006979,GO:0030091,GO:0008113,GO:0033744;gbkey=CDS;gene=msrA;go_function=peptide-methionine (S)-S-oxide reductase activity|0008113||IEA,L-methionine:thioredoxin-disulfide S-oxidoreductase activity|0033744||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224757.1;locus_tag=PHA56_RS25450;product=peptide-methionine (S)-S-oxide reductase MsrA;protein_id=WP_014227641.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5396840 5398183 . + . ID=gene-PHA56_RS25455;Name=PHA56_RS25455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS25455;old_locus_tag=PHA56_25455 NZ_CP116214.1 Protein Homology CDS 5396840 5398183 . + 0 ID=cds-WP_014227640.1;Parent=gene-PHA56_RS25455;Dbxref=Genbank:WP_014227640.1;Name=WP_014227640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014837205.1;locus_tag=PHA56_RS25455;product=hemolysin family protein;protein_id=WP_014227640.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5398380 5399612 . + . ID=gene-PHA56_RS25460;Name=PHA56_RS25460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS25460;old_locus_tag=PHA56_25460 NZ_CP116214.1 Protein Homology CDS 5398380 5399612 . + 0 ID=cds-WP_014837204.1;Parent=gene-PHA56_RS25460;Dbxref=Genbank:WP_014837204.1;Name=WP_014837204.1;Ontology_term=GO:0008643,GO:0005351,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=carbohydrate:proton symporter activity|0005351||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004206484.1;locus_tag=PHA56_RS25460;product=oligosaccharide MFS transporter;protein_id=WP_014837204.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5399631 5401640 . + . ID=gene-PHA56_RS25465;Name=PHA56_RS25465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS25465;old_locus_tag=PHA56_25465 NZ_CP116214.1 Protein Homology CDS 5399631 5401640 . + 0 ID=cds-WP_271292941.1;Parent=gene-PHA56_RS25465;Dbxref=Genbank:WP_271292941.1;Name=WP_271292941.1;Ontology_term=GO:0005975,GO:0004565,GO:0009341;gbkey=CDS;go_component=beta-galactosidase complex|0009341||IEA;go_function=beta-galactosidase activity|0004565||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012543097.1;locus_tag=PHA56_RS25465;product=beta-galactosidase;protein_id=WP_271292941.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5401671 5402543 . + . ID=gene-PHA56_RS25470;Name=araC;gbkey=Gene;gene=araC;gene_biotype=protein_coding;locus_tag=PHA56_RS25470;old_locus_tag=PHA56_25470 NZ_CP116214.1 Protein Homology CDS 5401671 5402543 . + 0 ID=cds-WP_004098024.1;Parent=gene-PHA56_RS25470;Dbxref=Genbank:WP_004098024.1;Name=WP_004098024.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=araC;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014227637.1;locus_tag=PHA56_RS25470;product=arabinose operon transcriptional regulator AraC;protein_id=WP_004098024.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5402611 5402817 . - . ID=gene-PHA56_RS25475;Name=PHA56_RS25475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS25475;old_locus_tag=PHA56_25475 NZ_CP116214.1 Protein Homology CDS 5402611 5402817 . - 0 ID=cds-WP_004098023.1;Parent=gene-PHA56_RS25475;Dbxref=Genbank:WP_004098023.1;Name=WP_004098023.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966176.1;locus_tag=PHA56_RS25475;product=DUF1107 domain-containing protein;protein_id=WP_004098023.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5403140 5403697 . + . ID=gene-PHA56_RS25480;Name=PHA56_RS25480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS25480;old_locus_tag=PHA56_25480 NZ_CP116214.1 Protein Homology CDS 5403140 5403697 . + 0 ID=cds-WP_014837202.1;Parent=gene-PHA56_RS25480;Dbxref=Genbank:WP_014837202.1;Name=WP_014837202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224754.1;locus_tag=PHA56_RS25480;product=YtfJ family protein;protein_id=WP_014837202.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5403687 5404430 . - . ID=gene-PHA56_RS25485;Name=cysQ;gbkey=Gene;gene=cysQ;gene_biotype=protein_coding;locus_tag=PHA56_RS25485;old_locus_tag=PHA56_25485 NZ_CP116214.1 Protein Homology CDS 5403687 5404430 . - 0 ID=cds-WP_004098019.1;Parent=gene-PHA56_RS25485;Dbxref=Genbank:WP_004098019.1;Name=WP_004098019.1;Ontology_term=GO:0046855,GO:0000287,GO:0008441;gbkey=CDS;gene=cysQ;go_function=magnesium ion binding|0000287||IEA,3'(2')%2C5'-bisphosphate nucleotidase activity|0008441||IEA;go_process=inositol phosphate dephosphorylation|0046855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313219.1;locus_tag=PHA56_RS25485;product=3'(2')%2C5'-bisphosphate nucleotidase CysQ;protein_id=WP_004098019.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5404622 5406565 . + . ID=gene-PHA56_RS25490;Name=PHA56_RS25490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS25490;old_locus_tag=PHA56_25490 NZ_CP116214.1 Protein Homology CDS 5404622 5406565 . + 0 ID=cds-WP_038423968.1;Parent=gene-PHA56_RS25490;Dbxref=Genbank:WP_038423968.1;Name=WP_038423968.1;Ontology_term=GO:0009166,GO:0000166,GO:0008663,GO:0016788;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase activity|0008663||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224752.1;locus_tag=PHA56_RS25490;product=bifunctional 2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase;protein_id=WP_038423968.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5406618 5406995 . - . ID=gene-PHA56_RS25495;Name=PHA56_RS25495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS25495;old_locus_tag=PHA56_25495 NZ_CP116214.1 Protein Homology CDS 5406618 5406995 . - 0 ID=cds-WP_004098015.1;Parent=gene-PHA56_RS25495;Dbxref=Genbank:WP_004098015.1;Name=WP_004098015.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004098015.1;locus_tag=PHA56_RS25495;product=helix-turn-helix domain-containing protein;protein_id=WP_004098015.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5407086 5407934 . + . ID=gene-PHA56_RS25500;Name=PHA56_RS25500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS25500;old_locus_tag=PHA56_25500 NZ_CP116214.1 Protein Homology CDS 5407086 5407934 . + 0 ID=cds-WP_014227633.1;Parent=gene-PHA56_RS25500;Dbxref=Genbank:WP_014227633.1;Name=WP_014227633.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224750.1;locus_tag=PHA56_RS25500;product=SDR family oxidoreductase;protein_id=WP_014227633.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5408015 5408839 . + . ID=gene-PHA56_RS25505;Name=PHA56_RS25505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS25505;old_locus_tag=PHA56_25505 NZ_CP116214.1 Protein Homology CDS 5408015 5408839 . + 0 ID=cds-WP_004098011.1;Parent=gene-PHA56_RS25505;Dbxref=Genbank:WP_004098011.1;Name=WP_004098011.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224749.1;locus_tag=PHA56_RS25505;product=AraC family transcriptional regulator;protein_id=WP_004098011.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5408915 5409886 . + . ID=gene-PHA56_RS25510;Name=PHA56_RS25510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS25510;old_locus_tag=PHA56_25510 NZ_CP116214.1 Protein Homology CDS 5408915 5409886 . + 0 ID=cds-WP_014227631.1;Parent=gene-PHA56_RS25510;Dbxref=Genbank:WP_014227631.1;Name=WP_014227631.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224748.1;locus_tag=PHA56_RS25510;product=DMT family transporter;protein_id=WP_014227631.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5409969 5410631 . + . ID=gene-PHA56_RS25515;Name=ytfE;gbkey=Gene;gene=ytfE;gene_biotype=protein_coding;locus_tag=PHA56_RS25515;old_locus_tag=PHA56_25515 NZ_CP116214.1 Protein Homology CDS 5409969 5410631 . + 0 ID=cds-WP_014227630.1;Parent=gene-PHA56_RS25515;Dbxref=Genbank:WP_014227630.1;Name=WP_014227630.1;gbkey=CDS;gene=ytfE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224747.1;locus_tag=PHA56_RS25515;product=iron-sulfur cluster repair protein YtfE;protein_id=WP_014227630.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5410746 5412149 . - . ID=gene-PHA56_RS25520;Name=cycA;gbkey=Gene;gene=cycA;gene_biotype=protein_coding;gene_synonym=dagA;locus_tag=PHA56_RS25520;old_locus_tag=PHA56_25520 NZ_CP116214.1 Protein Homology CDS 5410746 5412149 . - 0 ID=cds-WP_004128150.1;Parent=gene-PHA56_RS25520;Dbxref=Genbank:WP_004128150.1;Name=WP_004128150.1;Ontology_term=GO:0006865,GO:0055085,GO:0016020;gbkey=CDS;gene=cycA;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224746.1;locus_tag=PHA56_RS25520;product=D-serine/D-alanine/glycine transporter;protein_id=WP_004128150.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5412456 5413076 . - . ID=gene-PHA56_RS25525;Name=fklB;gbkey=Gene;gene=fklB;gene_biotype=protein_coding;locus_tag=PHA56_RS25525;old_locus_tag=PHA56_25525 NZ_CP116214.1 Protein Homology CDS 5412456 5413076 . - 0 ID=cds-WP_004871077.1;Parent=gene-PHA56_RS25525;Dbxref=Genbank:WP_004871077.1;Name=WP_004871077.1;gbkey=CDS;gene=fklB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015742582.1;locus_tag=PHA56_RS25525;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_004871077.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5413344 5414009 . + . ID=gene-PHA56_RS25530;Name=PHA56_RS25530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS25530;old_locus_tag=PHA56_25530 NZ_CP116214.1 Protein Homology CDS 5413344 5414009 . + 0 ID=cds-WP_038423967.1;Parent=gene-PHA56_RS25530;Dbxref=Genbank:WP_038423967.1;Name=WP_038423967.1;Ontology_term=GO:0042834;gbkey=CDS;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224744.1;locus_tag=PHA56_RS25530;product=LysM-like peptidoglycan-binding domain-containing protein;protein_id=WP_038423967.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5414028 5414978 . - . ID=gene-PHA56_RS25535;Name=PHA56_RS25535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS25535;old_locus_tag=PHA56_25535 NZ_CP116214.1 Protein Homology CDS 5414028 5414978 . - 0 ID=cds-WP_009652306.1;Parent=gene-PHA56_RS25535;Dbxref=Genbank:WP_009652306.1;Name=WP_009652306.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009652306.1;locus_tag=PHA56_RS25535;product=DMT family transporter;protein_id=WP_009652306.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5415125 5415574 . - . ID=gene-PHA56_RS25540;Name=rplI;gbkey=Gene;gene=rplI;gene_biotype=protein_coding;locus_tag=PHA56_RS25540;old_locus_tag=PHA56_25540 NZ_CP116214.1 Protein Homology CDS 5415125 5415574 . - 0 ID=cds-WP_004098003.1;Parent=gene-PHA56_RS25540;Dbxref=Genbank:WP_004098003.1;Name=WP_004098003.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplI;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134442.1;locus_tag=PHA56_RS25540;product=50S ribosomal protein L9;protein_id=WP_004098003.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5415616 5415843 . - . ID=gene-PHA56_RS25545;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=PHA56_RS25545;old_locus_tag=PHA56_25545 NZ_CP116214.1 Protein Homology CDS 5415616 5415843 . - 0 ID=cds-WP_000135199.1;Parent=gene-PHA56_RS25545;Dbxref=Genbank:WP_000135199.1;Name=WP_000135199.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsR;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012986941.1;locus_tag=PHA56_RS25545;product=30S ribosomal protein S18;protein_id=WP_000135199.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5415848 5416162 . - . ID=gene-PHA56_RS25550;Name=priB;gbkey=Gene;gene=priB;gene_biotype=protein_coding;locus_tag=PHA56_RS25550;old_locus_tag=PHA56_25550 NZ_CP116214.1 Protein Homology CDS 5415848 5416162 . - 0 ID=cds-WP_004098002.1;Parent=gene-PHA56_RS25550;Dbxref=Genbank:WP_004098002.1;Name=WP_004098002.1;Ontology_term=GO:0006269,GO:0003697;gbkey=CDS;gene=priB;go_function=single-stranded DNA binding|0003697||IEA;go_process=DNA replication%2C synthesis of RNA primer|0006269||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313204.1;locus_tag=PHA56_RS25550;product=primosomal replication protein N;protein_id=WP_004098002.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5416168 5416563 . - . ID=gene-PHA56_RS25555;Name=rpsF;gbkey=Gene;gene=rpsF;gene_biotype=protein_coding;locus_tag=PHA56_RS25555;old_locus_tag=PHA56_25555 NZ_CP116214.1 Protein Homology CDS 5416168 5416563 . - 0 ID=cds-WP_004098001.1;Parent=gene-PHA56_RS25555;Dbxref=Genbank:WP_004098001.1;Name=WP_004098001.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsF;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020456251.1;locus_tag=PHA56_RS25555;product=30S ribosomal protein S6;protein_id=WP_004098001.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5416900 5417175 . + . ID=gene-PHA56_RS25560;Name=PHA56_RS25560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS25560;old_locus_tag=PHA56_25560 NZ_CP116214.1 Protein Homology CDS 5416900 5417175 . + 0 ID=cds-WP_038423966.1;Parent=gene-PHA56_RS25560;Dbxref=Genbank:WP_038423966.1;Name=WP_038423966.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224740.1;locus_tag=PHA56_RS25560;product=DUF1471 domain-containing protein;protein_id=WP_038423966.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5417356 5418549 . + . ID=gene-PHA56_RS25565;Name=PHA56_RS25565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS25565;old_locus_tag=PHA56_25565 NZ_CP116214.1 Protein Homology CDS 5417356 5418549 . + 0 ID=cds-WP_032695157.1;Parent=gene-PHA56_RS25565;Dbxref=Genbank:WP_032695157.1;Name=WP_032695157.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224739.1;locus_tag=PHA56_RS25565;product=MFS transporter;protein_id=WP_032695157.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5418612 5419298 . - . ID=gene-PHA56_RS25570;Name=PHA56_RS25570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS25570;old_locus_tag=PHA56_25570 NZ_CP116214.1 Protein Homology CDS 5418612 5419298 . - 0 ID=cds-WP_004097998.1;Parent=gene-PHA56_RS25570;Dbxref=Genbank:WP_004097998.1;Name=WP_004097998.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463249.1;locus_tag=PHA56_RS25570;product=L-ribulose-5-phosphate 4-epimerase;protein_id=WP_004097998.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5419298 5420152 . - . ID=gene-PHA56_RS25575;Name=PHA56_RS25575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS25575;old_locus_tag=PHA56_25575 NZ_CP116214.1 Protein Homology CDS 5419298 5420152 . - 0 ID=cds-WP_014227628.1;Parent=gene-PHA56_RS25575;Dbxref=Genbank:WP_014227628.1;Name=WP_014227628.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313200.1;locus_tag=PHA56_RS25575;product=L-ribulose-5-phosphate 3-epimerase;protein_id=WP_014227628.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5420162 5420812 . - . ID=gene-PHA56_RS25580;Name=PHA56_RS25580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS25580;old_locus_tag=PHA56_25580 NZ_CP116214.1 Protein Homology CDS 5420162 5420812 . - 0 ID=cds-WP_009652369.1;Parent=gene-PHA56_RS25580;Dbxref=Genbank:WP_009652369.1;Name=WP_009652369.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313199.1;locus_tag=PHA56_RS25580;product=3-keto-L-gulonate-6-phosphate decarboxylase UlaD;protein_id=WP_009652369.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5420826 5421293 . - . ID=gene-PHA56_RS25585;Name=ulaC;gbkey=Gene;gene=ulaC;gene_biotype=protein_coding;locus_tag=PHA56_RS25585;old_locus_tag=PHA56_25585 NZ_CP116214.1 Protein Homology CDS 5420826 5421293 . - 0 ID=cds-WP_004097995.1;Parent=gene-PHA56_RS25585;Dbxref=Genbank:WP_004097995.1;Name=WP_004097995.1;gbkey=CDS;gene=ulaC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224735.1;locus_tag=PHA56_RS25585;product=PTS ascorbate transporter subunit IIA;protein_id=WP_004097995.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5421303 5421608 . - . ID=gene-PHA56_RS25590;Name=ulaB;gbkey=Gene;gene=ulaB;gene_biotype=protein_coding;locus_tag=PHA56_RS25590;old_locus_tag=PHA56_25590 NZ_CP116214.1 Protein Homology CDS 5421303 5421608 . - 0 ID=cds-WP_004109091.1;Parent=gene-PHA56_RS25590;Dbxref=Genbank:WP_004109091.1;Name=WP_004109091.1;gbkey=CDS;gene=ulaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463245.1;locus_tag=PHA56_RS25590;product=PTS ascorbate transporter subunit IIB;protein_id=WP_004109091.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5421621 5423021 . - . ID=gene-PHA56_RS25595;Name=ulaA;gbkey=Gene;gene=ulaA;gene_biotype=protein_coding;locus_tag=PHA56_RS25595;old_locus_tag=PHA56_25595 NZ_CP116214.1 Protein Homology CDS 5421621 5423021 . - 0 ID=cds-WP_004097992.1;Parent=gene-PHA56_RS25595;Dbxref=Genbank:WP_004097992.1;Name=WP_004097992.1;gbkey=CDS;gene=ulaA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224733.1;locus_tag=PHA56_RS25595;product=PTS ascorbate transporter subunit IIC;protein_id=WP_004097992.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5423386 5424450 . + . ID=gene-PHA56_RS25600;Name=ulaG;gbkey=Gene;gene=ulaG;gene_biotype=protein_coding;locus_tag=PHA56_RS25600;old_locus_tag=PHA56_25600 NZ_CP116214.1 Protein Homology CDS 5423386 5424450 . + 0 ID=cds-WP_004097991.1;Parent=gene-PHA56_RS25600;Dbxref=Genbank:WP_004097991.1;Name=WP_004097991.1;Ontology_term=GO:0019854,GO:0030145,GO:0035460;gbkey=CDS;gene=ulaG;go_function=manganese ion binding|0030145||IEA,L-ascorbate 6-phosphate lactonase activity|0035460||IEA;go_process=L-ascorbic acid catabolic process|0019854||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003856017.1;locus_tag=PHA56_RS25600;product=L-ascorbate 6-phosphate lactonase;protein_id=WP_004097991.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5424557 5425312 . + . ID=gene-PHA56_RS25605;Name=ulaR;gbkey=Gene;gene=ulaR;gene_biotype=protein_coding;locus_tag=PHA56_RS25605;old_locus_tag=PHA56_25605 NZ_CP116214.1 Protein Homology CDS 5424557 5425312 . + 0 ID=cds-WP_032695154.1;Parent=gene-PHA56_RS25605;Dbxref=Genbank:WP_032695154.1;Name=WP_032695154.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ulaR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224731.1;locus_tag=PHA56_RS25605;product=HTH-type transcriptional regulator UlaR;protein_id=WP_032695154.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5425309 5426025 . - . ID=gene-PHA56_RS25610;Name=yjfP;gbkey=Gene;gene=yjfP;gene_biotype=protein_coding;locus_tag=PHA56_RS25610;old_locus_tag=PHA56_25610 NZ_CP116214.1 Protein Homology CDS 5425309 5426025 . - 0 ID=cds-WP_004097989.1;Parent=gene-PHA56_RS25610;Dbxref=Genbank:WP_004097989.1;Name=WP_004097989.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;gene=yjfP;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224730.1;locus_tag=PHA56_RS25610;product=esterase;protein_id=WP_004097989.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5426223 5426531 . + . ID=gene-PHA56_RS25615;Name=bsmA;gbkey=Gene;gene=bsmA;gene_biotype=protein_coding;locus_tag=PHA56_RS25615;old_locus_tag=PHA56_25615 NZ_CP116214.1 Protein Homology CDS 5426223 5426531 . + 0 ID=cds-WP_032718861.1;Parent=gene-PHA56_RS25615;Dbxref=Genbank:WP_032718861.1;Name=WP_032718861.1;gbkey=CDS;gene=bsmA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224729.1;locus_tag=PHA56_RS25615;product=biofilm peroxide resistance protein BsmA;protein_id=WP_032718861.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5426669 5426944 . + . ID=gene-PHA56_RS25620;Name=yjfN;gbkey=Gene;gene=yjfN;gene_biotype=protein_coding;locus_tag=PHA56_RS25620;old_locus_tag=PHA56_25620 NZ_CP116214.1 Protein Homology CDS 5426669 5426944 . + 0 ID=cds-WP_014227626.1;Parent=gene-PHA56_RS25620;Dbxref=Genbank:WP_014227626.1;Name=WP_014227626.1;gbkey=CDS;gene=yjfN;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224728.1;locus_tag=PHA56_RS25620;product=DUF1471 family protease activator YjfN;protein_id=WP_014227626.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5426935 5428572 . - . ID=gene-PHA56_RS25625;Name=PHA56_RS25625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS25625;old_locus_tag=PHA56_25625 NZ_CP116214.1 Protein Homology CDS 5426935 5428572 . - 0 ID=cds-WP_032695152.1;Parent=gene-PHA56_RS25625;Dbxref=Genbank:WP_032695152.1;Name=WP_032695152.1;Ontology_term=GO:0003995;gbkey=CDS;go_function=acyl-CoA dehydrogenase activity|0003995||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224727.1;locus_tag=PHA56_RS25625;product=isovaleryl-CoA dehydrogenase;protein_id=WP_032695152.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5428678 5429031 . + . ID=gene-PHA56_RS25630;Name=PHA56_RS25630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS25630;old_locus_tag=PHA56_25630 NZ_CP116214.1 Protein Homology CDS 5428678 5429031 . + 0 ID=cds-WP_014227624.1;Parent=gene-PHA56_RS25630;Dbxref=Genbank:WP_014227624.1;Name=WP_014227624.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014837190.1;locus_tag=PHA56_RS25630;product=hypothetical protein;protein_id=WP_014227624.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5429077 5429808 . - . ID=gene-PHA56_RS25635;Name=rlmB;gbkey=Gene;gene=rlmB;gene_biotype=protein_coding;locus_tag=PHA56_RS25635;old_locus_tag=PHA56_25635 NZ_CP116214.1 Protein Homology CDS 5429077 5429808 . - 0 ID=cds-WP_004109129.1;Parent=gene-PHA56_RS25635;Dbxref=Genbank:WP_004109129.1;Name=WP_004109129.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173;gbkey=CDS;gene=rlmB;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313183.1;locus_tag=PHA56_RS25635;product=23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB;protein_id=WP_004109129.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5429890 5432340 . - . ID=gene-PHA56_RS25640;Name=rnr;gbkey=Gene;gene=rnr;gene_biotype=protein_coding;locus_tag=PHA56_RS25640;old_locus_tag=PHA56_25640 NZ_CP116214.1 Protein Homology CDS 5429890 5432340 . - 0 ID=cds-WP_004097981.1;Parent=gene-PHA56_RS25640;Dbxref=Genbank:WP_004097981.1;Name=WP_004097981.1;Ontology_term=GO:0016070,GO:0004540;gbkey=CDS;gene=rnr;go_function=ribonuclease activity|0004540||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224725.1;locus_tag=PHA56_RS25640;product=ribonuclease R;protein_id=WP_004097981.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5432378 5432803 . - . ID=gene-PHA56_RS25645;Name=nsrR;gbkey=Gene;gene=nsrR;gene_biotype=protein_coding;locus_tag=PHA56_RS25645;old_locus_tag=PHA56_25645 NZ_CP116214.1 Protein Homology CDS 5432378 5432803 . - 0 ID=cds-WP_004097980.1;Parent=gene-PHA56_RS25645;Dbxref=Genbank:WP_004097980.1;Name=WP_004097980.1;gbkey=CDS;gene=nsrR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134424.1;locus_tag=PHA56_RS25645;product=nitric oxide-sensing transcriptional repressor NsrR;protein_id=WP_004097980.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5432953 5434251 . - . ID=gene-PHA56_RS25650;Name=PHA56_RS25650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS25650;old_locus_tag=PHA56_25650 NZ_CP116214.1 Protein Homology CDS 5432953 5434251 . - 0 ID=cds-WP_004097979.1;Parent=gene-PHA56_RS25650;Dbxref=Genbank:WP_004097979.1;Name=WP_004097979.1;Ontology_term=GO:0006164,GO:0004019,GO:0005525;gbkey=CDS;go_function=adenylosuccinate synthase activity|0004019||IEA,GTP binding|0005525||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019842885.1;locus_tag=PHA56_RS25650;product=adenylosuccinate synthase;protein_id=WP_004097979.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5434354 5434551 . - . ID=gene-PHA56_RS25655;Name=PHA56_RS25655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS25655;old_locus_tag=PHA56_25655 NZ_CP116214.1 Protein Homology CDS 5434354 5434551 . - 0 ID=cds-WP_004097978.1;Parent=gene-PHA56_RS25655;Dbxref=Genbank:WP_004097978.1;Name=WP_004097978.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224722.1;locus_tag=PHA56_RS25655;product=DUF2065 domain-containing protein;protein_id=WP_004097978.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5434749 5435753 . - . ID=gene-PHA56_RS25660;Name=hflC;gbkey=Gene;gene=hflC;gene_biotype=protein_coding;locus_tag=PHA56_RS25660;old_locus_tag=PHA56_25660 NZ_CP116214.1 Protein Homology CDS 5434749 5435753 . - 0 ID=cds-WP_004097977.1;Parent=gene-PHA56_RS25660;Dbxref=Genbank:WP_004097977.1;Name=WP_004097977.1;gbkey=CDS;gene=hflC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224719.1;locus_tag=PHA56_RS25660;product=protease modulator HflC;protein_id=WP_004097977.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5435756 5437012 . - . ID=gene-PHA56_RS25665;Name=hflK;gbkey=Gene;gene=hflK;gene_biotype=protein_coding;locus_tag=PHA56_RS25665;old_locus_tag=PHA56_25665 NZ_CP116214.1 Protein Homology CDS 5435756 5437012 . - 0 ID=cds-WP_014227623.1;Parent=gene-PHA56_RS25665;Dbxref=Genbank:WP_014227623.1;Name=WP_014227623.1;Ontology_term=GO:0016020;gbkey=CDS;gene=hflK;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224718.1;locus_tag=PHA56_RS25665;product=FtsH protease activity modulator HflK;protein_id=WP_014227623.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5437078 5438358 . - . ID=gene-PHA56_RS25670;Name=hflX;gbkey=Gene;gene=hflX;gene_biotype=protein_coding;locus_tag=PHA56_RS25670;old_locus_tag=PHA56_25670 NZ_CP116214.1 Protein Homology CDS 5437078 5438358 . - 0 ID=cds-WP_004097973.1;Parent=gene-PHA56_RS25670;Dbxref=Genbank:WP_004097973.1;Name=WP_004097973.1;Ontology_term=GO:0005525;gbkey=CDS;gene=hflX;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224717.1;locus_tag=PHA56_RS25670;product=GTPase HflX;protein_id=WP_004097973.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5438434 5438742 . - . ID=gene-PHA56_RS25675;Name=hfq;gbkey=Gene;gene=hfq;gene_biotype=protein_coding;locus_tag=PHA56_RS25675;old_locus_tag=PHA56_25675 NZ_CP116214.1 Protein Homology CDS 5438434 5438742 . - 0 ID=cds-WP_004097968.1;Parent=gene-PHA56_RS25675;Dbxref=Genbank:WP_004097968.1;Name=WP_004097968.1;Ontology_term=GO:0006355,GO:0003723;gbkey=CDS;gene=hfq;go_function=RNA binding|0003723||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224716.1;locus_tag=PHA56_RS25675;product=RNA chaperone Hfq;protein_id=WP_004097968.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5438835 5439785 . - . ID=gene-PHA56_RS25680;Name=miaA;gbkey=Gene;gene=miaA;gene_biotype=protein_coding;locus_tag=PHA56_RS25680;old_locus_tag=PHA56_25680 NZ_CP116214.1 Protein Homology CDS 5438835 5439785 . - 0 ID=cds-WP_038423965.1;Parent=gene-PHA56_RS25680;Dbxref=Genbank:WP_038423965.1;Name=WP_038423965.1;Ontology_term=GO:0006400,GO:0052381,GO:0005737;gbkey=CDS;gene=miaA;go_component=cytoplasm|0005737||IEA;go_function=tRNA dimethylallyltransferase activity|0052381||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014599015.1;locus_tag=PHA56_RS25680;product=tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA;protein_id=WP_038423965.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5439778 5441667 . - . ID=gene-PHA56_RS25685;Name=mutL;gbkey=Gene;gene=mutL;gene_biotype=protein_coding;locus_tag=PHA56_RS25685;old_locus_tag=PHA56_25685 NZ_CP116214.1 Protein Homology CDS 5439778 5441667 . - 0 ID=cds-WP_038423964.1;Parent=gene-PHA56_RS25685;Dbxref=Genbank:WP_038423964.1;Name=WP_038423964.1;Ontology_term=GO:0006298,GO:0005524,GO:0016887,GO:0030983,GO:0032300;gbkey=CDS;gene=mutL;go_component=mismatch repair complex|0032300||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001402796.1;locus_tag=PHA56_RS25685;product=DNA mismatch repair endonuclease MutL;protein_id=WP_038423964.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5441678 5443009 . - . ID=gene-PHA56_RS25690;Name=amiB;gbkey=Gene;gene=amiB;gene_biotype=protein_coding;locus_tag=PHA56_RS25690;old_locus_tag=PHA56_25690 NZ_CP116214.1 Protein Homology CDS 5441678 5443009 . - 0 ID=cds-WP_014227620.1;Parent=gene-PHA56_RS25690;Dbxref=Genbank:WP_014227620.1;Name=WP_014227620.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=amiB;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224712.1;locus_tag=PHA56_RS25690;product=N-acetylmuramoyl-L-alanine amidase AmiB;protein_id=WP_014227620.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5443026 5443487 . - . ID=gene-PHA56_RS25695;Name=tsaE;gbkey=Gene;gene=tsaE;gene_biotype=protein_coding;locus_tag=PHA56_RS25695;old_locus_tag=PHA56_25695 NZ_CP116214.1 Protein Homology CDS 5443026 5443487 . - 0 ID=cds-WP_014227619.1;Parent=gene-PHA56_RS25695;Dbxref=Genbank:WP_014227619.1;Name=WP_014227619.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaE;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004109155.1;locus_tag=PHA56_RS25695;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE;protein_id=WP_014227619.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5443480 5444991 . - . ID=gene-PHA56_RS25700;Name=nnr;gbkey=Gene;gene=nnr;gene_biotype=protein_coding;locus_tag=PHA56_RS25700;old_locus_tag=PHA56_25700 NZ_CP116214.1 Protein Homology CDS 5443480 5444991 . - 0 ID=cds-WP_162933636.1;Parent=gene-PHA56_RS25700;Dbxref=Genbank:WP_162933636.1;Name=WP_162933636.1;Ontology_term=GO:0052855;gbkey=CDS;gene=nnr;go_function=ADP-dependent NAD(P)H-hydrate dehydratase activity|0052855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224710.1;locus_tag=PHA56_RS25700;product=bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase;protein_id=WP_162933636.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5445005 5446144 . + . ID=gene-PHA56_RS25705;Name=queG;gbkey=Gene;gene=queG;gene_biotype=protein_coding;locus_tag=PHA56_RS25705;old_locus_tag=PHA56_25705 NZ_CP116214.1 Protein Homology CDS 5445005 5446144 . + 0 ID=cds-WP_014227617.1;Parent=gene-PHA56_RS25705;Dbxref=Genbank:WP_014227617.1;Name=WP_014227617.1;Ontology_term=GO:0008616,GO:0051539,GO:0052693;gbkey=CDS;gene=queG;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,epoxyqueuosine reductase activity|0052693||IEA;go_process=queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224709.1;locus_tag=PHA56_RS25705;product=tRNA epoxyqueuosine(34) reductase QueG;protein_id=WP_014227617.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5446414 5446489 . - . ID=gene-PHA56_RS25710;Name=PHA56_RS25710;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA56_RS25710;old_locus_tag=PHA56_25710 NZ_CP116214.1 tRNAscan-SE tRNA 5446414 5446489 . - . ID=rna-PHA56_RS25710;Parent=gene-PHA56_RS25710;anticodon=(pos:complement(5446454..5446456));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS25710;product=tRNA-Gly NZ_CP116214.1 tRNAscan-SE exon 5446414 5446489 . - . ID=exon-PHA56_RS25710-1;Parent=rna-PHA56_RS25710;anticodon=(pos:complement(5446454..5446456));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS25710;product=tRNA-Gly NZ_CP116214.1 RefSeq gene 5446514 5446589 . - . ID=gene-PHA56_RS25715;Name=PHA56_RS25715;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA56_RS25715;old_locus_tag=PHA56_25715 NZ_CP116214.1 tRNAscan-SE tRNA 5446514 5446589 . - . ID=rna-PHA56_RS25715;Parent=gene-PHA56_RS25715;anticodon=(pos:complement(5446554..5446556));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS25715;product=tRNA-Gly NZ_CP116214.1 tRNAscan-SE exon 5446514 5446589 . - . ID=exon-PHA56_RS25715-1;Parent=rna-PHA56_RS25715;anticodon=(pos:complement(5446554..5446556));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS25715;product=tRNA-Gly NZ_CP116214.1 RefSeq gene 5446614 5446689 . - . ID=gene-PHA56_RS25720;Name=PHA56_RS25720;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA56_RS25720;old_locus_tag=PHA56_25720 NZ_CP116214.1 tRNAscan-SE tRNA 5446614 5446689 . - . ID=rna-PHA56_RS25720;Parent=gene-PHA56_RS25720;anticodon=(pos:complement(5446654..5446656));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS25720;product=tRNA-Gly NZ_CP116214.1 tRNAscan-SE exon 5446614 5446689 . - . ID=exon-PHA56_RS25720-1;Parent=rna-PHA56_RS25720;anticodon=(pos:complement(5446654..5446656));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS25720;product=tRNA-Gly NZ_CP116214.1 RefSeq gene 5446976 5447707 . + . ID=gene-PHA56_RS25725;Name=PHA56_RS25725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS25725;old_locus_tag=PHA56_25725 NZ_CP116214.1 Protein Homology CDS 5446976 5447707 . + 0 ID=cds-WP_032695148.1;Parent=gene-PHA56_RS25725;Dbxref=Genbank:WP_032695148.1;Name=WP_032695148.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224707.1;locus_tag=PHA56_RS25725;product=arginine ABC transporter substrate-binding protein;protein_id=WP_032695148.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5447748 5448293 . - . ID=gene-PHA56_RS25730;Name=orn;gbkey=Gene;gene=orn;gene_biotype=protein_coding;locus_tag=PHA56_RS25730;old_locus_tag=PHA56_25730 NZ_CP116214.1 Protein Homology CDS 5447748 5448293 . - 0 ID=cds-WP_004097954.1;Parent=gene-PHA56_RS25730;Dbxref=Genbank:WP_004097954.1;Name=WP_004097954.1;Ontology_term=GO:0000175,GO:0003676;gbkey=CDS;gene=orn;go_function=3'-5'-exoribonuclease activity|0000175||IEA,nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882950.1;locus_tag=PHA56_RS25730;product=oligoribonuclease;protein_id=WP_004097954.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5448388 5449449 . + . ID=gene-PHA56_RS25735;Name=rsgA;gbkey=Gene;gene=rsgA;gene_biotype=protein_coding;locus_tag=PHA56_RS25735;old_locus_tag=PHA56_25735 NZ_CP116214.1 Protein Homology CDS 5448388 5449449 . + 0 ID=cds-WP_004097952.1;Parent=gene-PHA56_RS25735;Dbxref=Genbank:WP_004097952.1;Name=WP_004097952.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=rsgA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224705.1;locus_tag=PHA56_RS25735;product=small ribosomal subunit biogenesis GTPase RsgA;protein_id=WP_004097952.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5449544 5450506 . + . ID=gene-PHA56_RS25740;Name=asd;gbkey=Gene;gene=asd;gene_biotype=protein_coding;locus_tag=PHA56_RS25740;old_locus_tag=PHA56_25740 NZ_CP116214.1 Protein Homology CDS 5449544 5450506 . + 0 ID=cds-WP_032695147.1;Parent=gene-PHA56_RS25740;Dbxref=Genbank:WP_032695147.1;Name=WP_032695147.1;Note=Phosphatidylserine decarboxylase is synthesized as a single chain precursor. Generation of the pyruvoyl active site from a Ser is coupled to cleavage of a Gly-Ser bond between the larger (beta) and smaller (alpha chains). It is an integral membrane protein.;Ontology_term=GO:0008654,GO:0004609;gbkey=CDS;gene=asd;go_function=phosphatidylserine decarboxylase activity|0004609||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224704.1;locus_tag=PHA56_RS25740;product=archaetidylserine decarboxylase;protein_id=WP_032695147.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5450528 5453854 . + . ID=gene-PHA56_RS25745;Name=mscM;gbkey=Gene;gene=mscM;gene_biotype=protein_coding;locus_tag=PHA56_RS25745;old_locus_tag=PHA56_25745 NZ_CP116214.1 Protein Homology CDS 5450528 5453854 . + 0 ID=cds-WP_014227614.1;Parent=gene-PHA56_RS25745;Dbxref=Genbank:WP_014227614.1;Name=WP_014227614.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=mscM;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224703.1;locus_tag=PHA56_RS25745;product=miniconductance mechanosensitive channel MscM;protein_id=WP_014227614.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5453891 5455393 . - . ID=gene-PHA56_RS25750;Name=yjeM;gbkey=Gene;gene=yjeM;gene_biotype=protein_coding;locus_tag=PHA56_RS25750;old_locus_tag=PHA56_25750 NZ_CP116214.1 Protein Homology CDS 5453891 5455393 . - 0 ID=cds-WP_032695146.1;Parent=gene-PHA56_RS25750;Dbxref=Genbank:WP_032695146.1;Name=WP_032695146.1;Ontology_term=GO:0022857;gbkey=CDS;gene=yjeM;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224702.1;locus_tag=PHA56_RS25750;product=glutamate/gamma-aminobutyrate family transporter YjeM;protein_id=WP_032695146.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5455545 5456522 . - . ID=gene-PHA56_RS25755;Name=epmA;gbkey=Gene;gene=epmA;gene_biotype=protein_coding;locus_tag=PHA56_RS25755;old_locus_tag=PHA56_25755 NZ_CP116214.1 Protein Homology CDS 5455545 5456522 . - 0 ID=cds-WP_014227612.1;Parent=gene-PHA56_RS25755;Dbxref=Genbank:WP_014227612.1;Name=WP_014227612.1;Ontology_term=GO:0006418,GO:0004812;gbkey=CDS;gene=epmA;go_function=aminoacyl-tRNA ligase activity|0004812||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000004771.1;locus_tag=PHA56_RS25755;product=elongation factor P--(R)-beta-lysine ligase;protein_id=WP_014227612.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5456798 5458588 . + . ID=gene-PHA56_RS25760;Name=frdA;gbkey=Gene;gene=frdA;gene_biotype=protein_coding;locus_tag=PHA56_RS25760;old_locus_tag=PHA56_25760 NZ_CP116214.1 Protein Homology CDS 5456798 5458588 . + 0 ID=cds-WP_014227611.1;Parent=gene-PHA56_RS25760;Dbxref=Genbank:WP_014227611.1;Name=WP_014227611.1;Ontology_term=GO:0009061,GO:0022900,GO:0016491,GO:0050660;gbkey=CDS;gene=frdA;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=anaerobic respiration|0009061||IEA,electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224700.1;locus_tag=PHA56_RS25760;product=fumarate reductase (quinol) flavoprotein subunit;protein_id=WP_014227611.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5458581 5459315 . + . ID=gene-PHA56_RS25765;Name=PHA56_RS25765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS25765;old_locus_tag=PHA56_25765 NZ_CP116214.1 Protein Homology CDS 5458581 5459315 . + 0 ID=cds-WP_004109180.1;Parent=gene-PHA56_RS25765;Dbxref=Genbank:WP_004109180.1;Name=WP_004109180.1;Ontology_term=GO:0006099,GO:0009055,GO:0016491,GO:0051536;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,oxidoreductase activity|0016491||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882957.1;locus_tag=PHA56_RS25765;product=succinate dehydrogenase/fumarate reductase iron-sulfur subunit;protein_id=WP_004109180.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5459326 5459721 . + . ID=gene-PHA56_RS25770;Name=frdC;gbkey=Gene;gene=frdC;gene_biotype=protein_coding;locus_tag=PHA56_RS25770;old_locus_tag=PHA56_25770 NZ_CP116214.1 Protein Homology CDS 5459326 5459721 . + 0 ID=cds-WP_004097939.1;Parent=gene-PHA56_RS25770;Dbxref=Genbank:WP_004097939.1;Name=WP_004097939.1;Ontology_term=GO:0016020;gbkey=CDS;gene=frdC;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224698.1;locus_tag=PHA56_RS25770;product=fumarate reductase subunit FrdC;protein_id=WP_004097939.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5459732 5460091 . + . ID=gene-PHA56_RS25775;Name=frdD;gbkey=Gene;gene=frdD;gene_biotype=protein_coding;locus_tag=PHA56_RS25775;old_locus_tag=PHA56_25775 NZ_CP116214.1 Protein Homology CDS 5459732 5460091 . + 0 ID=cds-WP_004097938.1;Parent=gene-PHA56_RS25775;Dbxref=Genbank:WP_004097938.1;Name=WP_004097938.1;gbkey=CDS;gene=frdD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224697.1;locus_tag=PHA56_RS25775;product=fumarate reductase subunit FrdD;protein_id=WP_004097938.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5460232 5460762 . + . ID=gene-PHA56_RS25780;Name=PHA56_RS25780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS25780;old_locus_tag=PHA56_25780 NZ_CP116214.1 Protein Homology CDS 5460232 5460762 . + 0 ID=cds-WP_014227610.1;Parent=gene-PHA56_RS25780;Dbxref=Genbank:WP_014227610.1;Name=WP_014227610.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014227610.1;locus_tag=PHA56_RS25780;product=lipocalin family protein;protein_id=WP_014227610.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5460759 5461076 . - . ID=gene-PHA56_RS25785;Name=sugE;gbkey=Gene;gene=sugE;gene_biotype=protein_coding;locus_tag=PHA56_RS25785;old_locus_tag=PHA56_25785 NZ_CP116214.1 Protein Homology CDS 5460759 5461076 . - 0 ID=cds-WP_014227609.1;Parent=gene-PHA56_RS25785;Dbxref=Genbank:WP_014227609.1;Name=WP_014227609.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;gene=sugE;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224695.1;locus_tag=PHA56_RS25785;product=quaternary ammonium compound efflux SMR transporter SugE;protein_id=WP_014227609.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5461217 5461363 . - . ID=gene-PHA56_RS25790;Name=ecnB;gbkey=Gene;gene=ecnB;gene_biotype=protein_coding;locus_tag=PHA56_RS25790;old_locus_tag=PHA56_25790 NZ_CP116214.1 Protein Homology CDS 5461217 5461363 . - 0 ID=cds-WP_004097935.1;Parent=gene-PHA56_RS25790;Dbxref=Genbank:WP_004097935.1;Name=WP_004097935.1;gbkey=CDS;gene=ecnB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224694.1;locus_tag=PHA56_RS25790;product=lipoprotein toxin entericidin B;protein_id=WP_004097935.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5461526 5461657 . - . ID=gene-PHA56_RS25795;Name=PHA56_RS25795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS25795;old_locus_tag=PHA56_25795 NZ_CP116214.1 Protein Homology CDS 5461526 5461657 . - 0 ID=cds-WP_014227608.1;Parent=gene-PHA56_RS25795;Dbxref=Genbank:WP_014227608.1;Name=WP_014227608.1;Ontology_term=GO:0009636,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=response to toxic substance|0009636||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002885511.1;locus_tag=PHA56_RS25795;product=entericidin A/B family lipoprotein;protein_id=WP_014227608.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5461727 5462293 . - . ID=gene-PHA56_RS25800;Name=efp;gbkey=Gene;gene=efp;gene_biotype=protein_coding;locus_tag=PHA56_RS25800;old_locus_tag=PHA56_25800 NZ_CP116214.1 Protein Homology CDS 5461727 5462293 . - 0 ID=cds-WP_004097931.1;Parent=gene-PHA56_RS25800;Dbxref=Genbank:WP_004097931.1;Name=WP_004097931.1;Ontology_term=GO:0006414,GO:0003746,GO:0005737;gbkey=CDS;gene=efp;go_component=cytoplasm|0005737||IEA;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004871142.1;locus_tag=PHA56_RS25800;product=elongation factor P;protein_id=WP_004097931.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5462336 5463364 . + . ID=gene-PHA56_RS25805;Name=epmB;gbkey=Gene;gene=epmB;gene_biotype=protein_coding;locus_tag=PHA56_RS25805;old_locus_tag=PHA56_25805 NZ_CP116214.1 Protein Homology CDS 5462336 5463364 . + 0 ID=cds-WP_032695144.1;Parent=gene-PHA56_RS25805;Dbxref=Genbank:WP_032695144.1;Name=WP_032695144.1;Ontology_term=GO:0072581;gbkey=CDS;gene=epmB;go_process=protein-N6-(L-lysyl)-L-lysine modification to protein-N6-(beta-lysyl)-L-lysine|0072581||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313154.1;locus_tag=PHA56_RS25805;product=EF-P beta-lysylation protein EpmB;protein_id=WP_032695144.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5463526 5464092 . - . ID=gene-PHA56_RS25810;Name=PHA56_RS25810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS25810;old_locus_tag=PHA56_25810 NZ_CP116214.1 Protein Homology CDS 5463526 5464092 . - 0 ID=cds-WP_014227606.1;Parent=gene-PHA56_RS25810;Dbxref=Genbank:WP_014227606.1;Name=WP_014227606.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017145091.1;locus_tag=PHA56_RS25810;product=winged helix-turn-helix domain-containing protein;protein_id=WP_014227606.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5464585 5465145 . + . ID=gene-PHA56_RS25815;Name=PHA56_RS25815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS25815;old_locus_tag=PHA56_25815 NZ_CP116214.1 Protein Homology CDS 5464585 5465145 . + 0 ID=cds-WP_014227605.1;Parent=gene-PHA56_RS25815;Dbxref=Genbank:WP_014227605.1;Name=WP_014227605.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017145092.1;locus_tag=PHA56_RS25815;product=type 1 fimbrial protein;protein_id=WP_014227605.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5465203 5465895 . + . ID=gene-PHA56_RS25820;Name=PHA56_RS25820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS25820;old_locus_tag=PHA56_25820 NZ_CP116214.1 Protein Homology CDS 5465203 5465895 . + 0 ID=cds-WP_014227604.1;Parent=gene-PHA56_RS25820;Dbxref=Genbank:WP_014227604.1;Name=WP_014227604.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004109214.1;locus_tag=PHA56_RS25820;product=molecular chaperone;protein_id=WP_014227604.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5465946 5468480 . + . ID=gene-PHA56_RS25825;Name=PHA56_RS25825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS25825;old_locus_tag=PHA56_25825 NZ_CP116214.1 Protein Homology CDS 5465946 5468480 . + 0 ID=cds-WP_051800681.1;Parent=gene-PHA56_RS25825;Dbxref=Genbank:WP_051800681.1;Name=WP_051800681.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004097921.1;locus_tag=PHA56_RS25825;product=fimbrial biogenesis outer membrane usher protein;protein_id=WP_051800681.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5468485 5469498 . + . ID=gene-PHA56_RS25830;Name=PHA56_RS25830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS25830;old_locus_tag=PHA56_25830 NZ_CP116214.1 Protein Homology CDS 5468485 5469498 . + 0 ID=cds-WP_014837173.1;Parent=gene-PHA56_RS25830;Dbxref=Genbank:WP_014837173.1;Name=WP_014837173.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004097920.1;locus_tag=PHA56_RS25830;product=fimbrial protein;protein_id=WP_014837173.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5469937 5470299 . + . ID=gene-PHA56_RS25835;Name=PHA56_RS25835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS25835;old_locus_tag=PHA56_25835 NZ_CP116214.1 Protein Homology CDS 5469937 5470299 . + 0 ID=cds-WP_032719312.1;Parent=gene-PHA56_RS25835;Dbxref=Genbank:WP_032719312.1;Name=WP_032719312.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014227601.1;locus_tag=PHA56_RS25835;product=hypothetical protein;protein_id=WP_032719312.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5470380 5471666 . + . ID=gene-PHA56_RS25840;Name=PHA56_RS25840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS25840;old_locus_tag=PHA56_25840 NZ_CP116214.1 Protein Homology CDS 5470380 5471666 . + 0 ID=cds-WP_038423961.1;Parent=gene-PHA56_RS25840;Dbxref=Genbank:WP_038423961.1;Name=WP_038423961.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004097918.1;locus_tag=PHA56_RS25840;product=HlyD family secretion protein;protein_id=WP_038423961.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5471659 5473782 . + . ID=gene-PHA56_RS25845;Name=PHA56_RS25845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS25845;old_locus_tag=PHA56_25845 NZ_CP116214.1 Protein Homology CDS 5471659 5473782 . + 0 ID=cds-WP_042944129.1;Parent=gene-PHA56_RS25845;Dbxref=Genbank:WP_042944129.1;Name=WP_042944129.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224683.1;locus_tag=PHA56_RS25845;product=peptidase domain-containing ABC transporter;protein_id=WP_042944129.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5473805 5474671 . + . ID=gene-PHA56_RS25850;Name=yjeJ;gbkey=Gene;gene=yjeJ;gene_biotype=protein_coding;locus_tag=PHA56_RS25850;old_locus_tag=PHA56_25850 NZ_CP116214.1 Protein Homology CDS 5473805 5474671 . + 0 ID=cds-WP_014837171.1;Parent=gene-PHA56_RS25850;Dbxref=Genbank:WP_014837171.1;Name=WP_014837171.1;gbkey=CDS;gene=yjeJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014837171.1;locus_tag=PHA56_RS25850;product=YjeJ family protein;protein_id=WP_014837171.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5474718 5475071 . - . ID=gene-PHA56_RS25855;Name=PHA56_RS25855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS25855;old_locus_tag=PHA56_25855 NZ_CP116214.1 Protein Homology CDS 5474718 5475071 . - 0 ID=cds-WP_004097909.1;Parent=gene-PHA56_RS25855;Dbxref=Genbank:WP_004097909.1;Name=WP_004097909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224681.1;locus_tag=PHA56_RS25855;product=DUF4156 domain-containing protein;protein_id=WP_004097909.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5475205 5476851 . - . ID=gene-PHA56_RS25860;Name=groL;gbkey=Gene;gene=groL;gene_biotype=protein_coding;locus_tag=PHA56_RS25860;old_locus_tag=PHA56_25860 NZ_CP116214.1 Protein Homology CDS 5475205 5476851 . - 0 ID=cds-WP_014227597.1;Parent=gene-PHA56_RS25860;Dbxref=Genbank:WP_014227597.1;Name=WP_014227597.1;Note=60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds;Ontology_term=GO:0006457,GO:0005515,GO:0016887;gbkey=CDS;gene=groL;go_function=protein binding|0005515||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120975.1;locus_tag=PHA56_RS25860;product=chaperonin GroEL;protein_id=WP_014227597.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5476895 5477188 . - . ID=gene-PHA56_RS25865;Name=PHA56_RS25865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS25865;old_locus_tag=PHA56_25865 NZ_CP116214.1 Protein Homology CDS 5476895 5477188 . - 0 ID=cds-WP_003855929.1;Parent=gene-PHA56_RS25865;Dbxref=Genbank:WP_003855929.1;Name=WP_003855929.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000027827.1;locus_tag=PHA56_RS25865;product=co-chaperone GroES;protein_id=WP_003855929.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5477423 5478682 . + . ID=gene-PHA56_RS25870;Name=yjeH;gbkey=Gene;gene=yjeH;gene_biotype=protein_coding;locus_tag=PHA56_RS25870;old_locus_tag=PHA56_25870 NZ_CP116214.1 Protein Homology CDS 5477423 5478682 . + 0 ID=cds-WP_014227596.1;Parent=gene-PHA56_RS25870;Dbxref=Genbank:WP_014227596.1;Name=WP_014227596.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=yjeH;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004117327.1;locus_tag=PHA56_RS25870;product=L-methionine/branched-chain amino acid transporter;protein_id=WP_014227596.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5478702 5479178 . - . ID=gene-PHA56_RS25875;Name=fxsA;gbkey=Gene;gene=fxsA;gene_biotype=protein_coding;locus_tag=PHA56_RS25875;old_locus_tag=PHA56_25875 NZ_CP116214.1 Protein Homology CDS 5478702 5479178 . - 0 ID=cds-WP_004097899.1;Parent=gene-PHA56_RS25875;Dbxref=Genbank:WP_004097899.1;Name=WP_004097899.1;gbkey=CDS;gene=fxsA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224676.1;locus_tag=PHA56_RS25875;product=membrane protein FxsA;protein_id=WP_004097899.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5479517 5480953 . + . ID=gene-PHA56_RS25880;Name=aspA;gbkey=Gene;gene=aspA;gene_biotype=protein_coding;locus_tag=PHA56_RS25880;old_locus_tag=PHA56_25880 NZ_CP116214.1 Protein Homology CDS 5479517 5480953 . + 0 ID=cds-WP_004097898.1;Parent=gene-PHA56_RS25880;Dbxref=Genbank:WP_004097898.1;Name=WP_004097898.1;Ontology_term=GO:0006520,GO:0008797;gbkey=CDS;gene=aspA;go_function=aspartate ammonia-lyase activity|0008797||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224674.1;locus_tag=PHA56_RS25880;product=aspartate ammonia-lyase;protein_id=WP_004097898.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5481072 5482373 . + . ID=gene-PHA56_RS25885;Name=PHA56_RS25885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS25885;old_locus_tag=PHA56_25885 NZ_CP116214.1 Protein Homology CDS 5481072 5482373 . + 0 ID=cds-WP_014227594.1;Parent=gene-PHA56_RS25885;Dbxref=Genbank:WP_014227594.1;Name=WP_014227594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224673.1;locus_tag=PHA56_RS25885;product=anaerobic C4-dicarboxylate transporter;protein_id=WP_014227594.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5482468 5482791 . + . ID=gene-PHA56_RS25890;Name=cutA;gbkey=Gene;gene=cutA;gene_biotype=protein_coding;locus_tag=PHA56_RS25890;old_locus_tag=PHA56_25890 NZ_CP116214.1 Protein Homology CDS 5482468 5482791 . + 0 ID=cds-WP_004097896.1;Parent=gene-PHA56_RS25890;Dbxref=Genbank:WP_004097896.1;Name=WP_004097896.1;gbkey=CDS;gene=cutA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224672.1;locus_tag=PHA56_RS25890;product=divalent cation tolerance protein CutA;protein_id=WP_004097896.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5482767 5484536 . + . ID=gene-PHA56_RS25895;Name=PHA56_RS25895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS25895;old_locus_tag=PHA56_25895 NZ_CP116214.1 Protein Homology CDS 5482767 5484536 . + 0 ID=cds-WP_038423959.1;Parent=gene-PHA56_RS25895;Dbxref=Genbank:WP_038423959.1;Name=WP_038423959.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014837170.1;locus_tag=PHA56_RS25895;product=protein-disulfide reductase DsbD;protein_id=WP_038423959.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5484557 5485147 . + . ID=gene-PHA56_RS25900;Name=PHA56_RS25900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS25900;old_locus_tag=PHA56_25900 NZ_CP116214.1 Protein Homology CDS 5484557 5485147 . + 0 ID=cds-WP_004097892.1;Parent=gene-PHA56_RS25900;Dbxref=Genbank:WP_004097892.1;Name=WP_004097892.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224670.1;locus_tag=PHA56_RS25900;product=transcriptional regulator;protein_id=WP_004097892.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5485216 5487303 . + . ID=gene-PHA56_RS25905;Name=PHA56_RS25905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS25905;old_locus_tag=PHA56_25905 NZ_CP116214.1 Protein Homology CDS 5485216 5487303 . + 0 ID=cds-WP_038423958.1;Parent=gene-PHA56_RS25905;Dbxref=Genbank:WP_038423958.1;Name=WP_038423958.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004097890.1;locus_tag=PHA56_RS25905;product=DUF1176 domain-containing protein;protein_id=WP_038423958.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5487419 5487494 . + . ID=gene-PHA56_RS25910;Name=PHA56_RS25910;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA56_RS25910;old_locus_tag=PHA56_25910 NZ_CP116214.1 tRNAscan-SE tRNA 5487419 5487494 . + . ID=rna-PHA56_RS25910;Parent=gene-PHA56_RS25910;anticodon=(pos:5487452..5487454);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS25910;product=tRNA-Phe NZ_CP116214.1 tRNAscan-SE exon 5487419 5487494 . + . ID=exon-PHA56_RS25910-1;Parent=rna-PHA56_RS25910;anticodon=(pos:5487452..5487454);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS25910;product=tRNA-Phe NZ_CP116214.1 RefSeq gene 5487714 5489936 . - . ID=gene-PHA56_RS25915;Name=PHA56_RS25915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS25915;old_locus_tag=PHA56_25915 NZ_CP116214.1 Protein Homology CDS 5487714 5489936 . - 0 ID=cds-WP_014837168.1;Parent=gene-PHA56_RS25915;Dbxref=Genbank:WP_014837168.1;Name=WP_014837168.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014837168.1;locus_tag=PHA56_RS25915;product=glycosyltransferase;protein_id=WP_014837168.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5490036 5490845 . + . ID=gene-PHA56_RS25920;Name=PHA56_RS25920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS25920;old_locus_tag=PHA56_25920 NZ_CP116214.1 Protein Homology CDS 5490036 5490845 . + 0 ID=cds-WP_004097886.1;Parent=gene-PHA56_RS25920;Dbxref=Genbank:WP_004097886.1;Name=WP_004097886.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004178424.1;locus_tag=PHA56_RS25920;product=polysaccharide pyruvyl transferase family protein;protein_id=WP_004097886.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5490880 5491515 . - . ID=gene-PHA56_RS25925;Name=PHA56_RS25925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS25925;old_locus_tag=PHA56_25925 NZ_CP116214.1 GeneMarkS-2+ CDS 5490880 5491515 . - 0 ID=cds-WP_271292942.1;Parent=gene-PHA56_RS25925;Dbxref=Genbank:WP_271292942.1;Name=WP_271292942.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PHA56_RS25925;product=hypothetical protein;protein_id=WP_271292942.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5491771 5492358 . - . ID=gene-PHA56_RS25930;Name=PHA56_RS25930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS25930;old_locus_tag=PHA56_25930 NZ_CP116214.1 Protein Homology CDS 5491771 5492358 . - 0 ID=cds-WP_032719319.1;Parent=gene-PHA56_RS25930;Dbxref=Genbank:WP_032719319.1;Name=WP_032719319.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014227590.1;locus_tag=PHA56_RS25930;product=NAD(P)H-dependent oxidoreductase;protein_id=WP_032719319.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5492474 5493070 . + . ID=gene-PHA56_RS25935;Name=PHA56_RS25935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS25935;old_locus_tag=PHA56_25935 NZ_CP116214.1 Protein Homology CDS 5492474 5493070 . + 0 ID=cds-WP_032747545.1;Parent=gene-PHA56_RS25935;Dbxref=Genbank:WP_032747545.1;Name=WP_032747545.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014227589.1;locus_tag=PHA56_RS25935;product=TetR/AcrR family transcriptional regulator;protein_id=WP_032747545.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5493104 5493886 . - . ID=gene-PHA56_RS25940;Name=PHA56_RS25940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS25940;old_locus_tag=PHA56_25940 NZ_CP116214.1 Protein Homology CDS 5493104 5493886 . - 0 ID=cds-WP_014837164.1;Parent=gene-PHA56_RS25940;Dbxref=Genbank:WP_014837164.1;Name=WP_014837164.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224660.1;locus_tag=PHA56_RS25940;product=DsbA family protein;protein_id=WP_014837164.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5494110 5494790 . + . ID=gene-PHA56_RS25945;Name=PHA56_RS25945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS25945;old_locus_tag=PHA56_25945 NZ_CP116214.1 Protein Homology CDS 5494110 5494790 . + 0 ID=cds-WP_004097877.1;Parent=gene-PHA56_RS25945;Dbxref=Genbank:WP_004097877.1;Name=WP_004097877.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004097877.1;locus_tag=PHA56_RS25945;product=TerC family protein;protein_id=WP_004097877.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5494941 5495861 . + . ID=gene-PHA56_RS25950;Name=cbpA;gbkey=Gene;gene=cbpA;gene_biotype=protein_coding;locus_tag=PHA56_RS25950;old_locus_tag=PHA56_25950 NZ_CP116214.1 Protein Homology CDS 5494941 5495861 . + 0 ID=cds-WP_042944127.1;Parent=gene-PHA56_RS25950;Dbxref=Genbank:WP_042944127.1;Name=WP_042944127.1;Ontology_term=GO:0006457,GO:0051082;gbkey=CDS;gene=cbpA;go_function=unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224656.1;locus_tag=PHA56_RS25950;product=curved DNA-binding protein;protein_id=WP_042944127.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5495861 5496166 . + . ID=gene-PHA56_RS25955;Name=cbpM;gbkey=Gene;gene=cbpM;gene_biotype=protein_coding;locus_tag=PHA56_RS25955;old_locus_tag=PHA56_25955 NZ_CP116214.1 Protein Homology CDS 5495861 5496166 . + 0 ID=cds-WP_014227586.1;Parent=gene-PHA56_RS25955;Dbxref=Genbank:WP_014227586.1;Name=WP_014227586.1;gbkey=CDS;gene=cbpM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004097873.1;locus_tag=PHA56_RS25955;product=chaperone modulator CbpM;protein_id=WP_014227586.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5496312 5497814 . - . ID=gene-PHA56_RS25960;Name=proP;gbkey=Gene;gene=proP;gene_biotype=protein_coding;locus_tag=PHA56_RS25960;old_locus_tag=PHA56_25960 NZ_CP116214.1 Protein Homology CDS 5496312 5497814 . - 0 ID=cds-WP_025107668.1;Parent=gene-PHA56_RS25960;Dbxref=Genbank:WP_025107668.1;Name=WP_025107668.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=proP;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224646.1;locus_tag=PHA56_RS25960;product=glycine betaine/L-proline transporter ProP;protein_id=WP_025107668.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5498355 5498690 . + . ID=gene-PHA56_RS25965;Name=PHA56_RS25965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS25965;old_locus_tag=PHA56_25965 NZ_CP116214.1 Protein Homology CDS 5498355 5498690 . + 0 ID=cds-WP_004097870.1;Parent=gene-PHA56_RS25965;Dbxref=Genbank:WP_004097870.1;Name=WP_004097870.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463154.1;locus_tag=PHA56_RS25965;product=zinc ribbon domain-containing protein YjdM;protein_id=WP_004097870.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5498827 5499261 . + . ID=gene-PHA56_RS25970;Name=yjdN;gbkey=Gene;gene=yjdN;gene_biotype=protein_coding;locus_tag=PHA56_RS25970;old_locus_tag=PHA56_25970 NZ_CP116214.1 Protein Homology CDS 5498827 5499261 . + 0 ID=cds-WP_004097869.1;Parent=gene-PHA56_RS25970;Dbxref=Genbank:WP_004097869.1;Name=WP_004097869.1;gbkey=CDS;gene=yjdN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004137437.1;locus_tag=PHA56_RS25970;product=VOC family metalloprotein YjdN;protein_id=WP_004097869.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5499479 5500204 . + . ID=gene-PHA56_RS25975;Name=phnF;gbkey=Gene;gene=phnF;gene_biotype=protein_coding;locus_tag=PHA56_RS25975;old_locus_tag=PHA56_25975 NZ_CP116214.1 Protein Homology CDS 5499479 5500204 . + 0 ID=cds-WP_032695092.1;Parent=gene-PHA56_RS25975;Dbxref=Genbank:WP_032695092.1;Name=WP_032695092.1;gbkey=CDS;gene=phnF;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224643.1;locus_tag=PHA56_RS25975;product=phosphonate metabolism transcriptional regulator PhnF;protein_id=WP_032695092.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5500205 5500657 . + . ID=gene-PHA56_RS25980;Name=phnG;gbkey=Gene;gene=phnG;gene_biotype=protein_coding;locus_tag=PHA56_RS25980;old_locus_tag=PHA56_25980 NZ_CP116214.1 Protein Homology CDS 5500205 5500657 . + 0 ID=cds-WP_004097867.1;Parent=gene-PHA56_RS25980;Dbxref=Genbank:WP_004097867.1;Name=WP_004097867.1;Ontology_term=GO:0015716,GO:0019634;gbkey=CDS;gene=phnG;go_process=organic phosphonate transport|0015716||IEA,organic phosphonate metabolic process|0019634||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313111.1;locus_tag=PHA56_RS25980;product=phosphonate C-P lyase system protein PhnG;protein_id=WP_004097867.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5500654 5501238 . + . ID=gene-PHA56_RS25985;Name=phnH;gbkey=Gene;gene=phnH;gene_biotype=protein_coding;locus_tag=PHA56_RS25985;old_locus_tag=PHA56_25985 NZ_CP116214.1 Protein Homology CDS 5500654 5501238 . + 0 ID=cds-WP_004097865.1;Parent=gene-PHA56_RS25985;Dbxref=Genbank:WP_004097865.1;Name=WP_004097865.1;Ontology_term=GO:0019634;gbkey=CDS;gene=phnH;go_process=organic phosphonate metabolic process|0019634||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224641.1;locus_tag=PHA56_RS25985;product=phosphonate C-P lyase system protein PhnH;protein_id=WP_004097865.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5501238 5502302 . + . ID=gene-PHA56_RS25990;Name=PHA56_RS25990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS25990;old_locus_tag=PHA56_25990 NZ_CP116214.1 Protein Homology CDS 5501238 5502302 . + 0 ID=cds-WP_032747534.1;Parent=gene-PHA56_RS25990;Dbxref=Genbank:WP_032747534.1;Name=WP_032747534.1;Ontology_term=GO:0019634;gbkey=CDS;go_process=organic phosphonate metabolic process|0019634||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224640.1;locus_tag=PHA56_RS25990;product=carbon-phosphorus lyase complex subunit PhnI;protein_id=WP_032747534.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5502295 5503143 . + . ID=gene-PHA56_RS25995;Name=PHA56_RS25995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS25995;old_locus_tag=PHA56_25995 NZ_CP116214.1 Protein Homology CDS 5502295 5503143 . + 0 ID=cds-WP_004097861.1;Parent=gene-PHA56_RS25995;Dbxref=Genbank:WP_004097861.1;Name=WP_004097861.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224639.1;locus_tag=PHA56_RS25995;product=alpha-D-ribose 1-methylphosphonate 5-phosphate C-P-lyase PhnJ;protein_id=WP_004097861.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5503140 5503898 . + . ID=gene-PHA56_RS26000;Name=phnK;gbkey=Gene;gene=phnK;gene_biotype=protein_coding;locus_tag=PHA56_RS26000;old_locus_tag=PHA56_26000 NZ_CP116214.1 Protein Homology CDS 5503140 5503898 . + 0 ID=cds-WP_032719322.1;Parent=gene-PHA56_RS26000;Dbxref=Genbank:WP_032719322.1;Name=WP_032719322.1;Ontology_term=GO:0019634,GO:0018835;gbkey=CDS;gene=phnK;go_function=carbon phosphorus lyase activity|0018835||IEA;go_process=organic phosphonate metabolic process|0019634||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224638.1;locus_tag=PHA56_RS26000;product=phosphonate C-P lyase system protein PhnK;protein_id=WP_032719322.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5504096 5504782 . + . ID=gene-PHA56_RS26005;Name=phnL;gbkey=Gene;gene=phnL;gene_biotype=protein_coding;locus_tag=PHA56_RS26005;old_locus_tag=PHA56_26005 NZ_CP116214.1 Protein Homology CDS 5504096 5504782 . + 0 ID=cds-WP_038423957.1;Parent=gene-PHA56_RS26005;Dbxref=Genbank:WP_038423957.1;Name=WP_038423957.1;Ontology_term=GO:0019634,GO:0018835;gbkey=CDS;gene=phnL;go_function=carbon phosphorus lyase activity|0018835||IEA;go_process=organic phosphonate metabolic process|0019634||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017145113.1;locus_tag=PHA56_RS26005;product=phosphonate C-P lyase system protein PhnL;protein_id=WP_038423957.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5504779 5505915 . + . ID=gene-PHA56_RS26010;Name=phnM;gbkey=Gene;gene=phnM;gene_biotype=protein_coding;locus_tag=PHA56_RS26010;old_locus_tag=PHA56_26010 NZ_CP116214.1 Protein Homology CDS 5504779 5505915 . + 0 ID=cds-WP_014837159.1;Parent=gene-PHA56_RS26010;Dbxref=Genbank:WP_014837159.1;Name=WP_014837159.1;Ontology_term=GO:0019700,GO:0016810;gbkey=CDS;gene=phnM;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;go_process=organic phosphonate catabolic process|0019700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224636.1;locus_tag=PHA56_RS26010;product=alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase;protein_id=WP_014837159.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5505915 5506478 . + . ID=gene-PHA56_RS26015;Name=phnN;gbkey=Gene;gene=phnN;gene_biotype=protein_coding;locus_tag=PHA56_RS26015;old_locus_tag=PHA56_26015 NZ_CP116214.1 Protein Homology CDS 5505915 5506478 . + 0 ID=cds-WP_014837158.1;Parent=gene-PHA56_RS26015;Dbxref=Genbank:WP_014837158.1;Name=WP_014837158.1;Ontology_term=GO:0006015,GO:0033863;gbkey=CDS;gene=phnN;go_function=ribose 1%2C5-bisphosphate phosphokinase activity|0033863||IEA;go_process=5-phosphoribose 1-diphosphate biosynthetic process|0006015||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014837158.1;locus_tag=PHA56_RS26015;product=ribose 1%2C5-bisphosphokinase;protein_id=WP_014837158.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5506494 5507252 . + . ID=gene-PHA56_RS26020;Name=phnP;gbkey=Gene;gene=phnP;gene_biotype=protein_coding;locus_tag=PHA56_RS26020;old_locus_tag=PHA56_26020 NZ_CP116214.1 Protein Homology CDS 5506494 5507252 . + 0 ID=cds-WP_038423956.1;Parent=gene-PHA56_RS26020;Dbxref=Genbank:WP_038423956.1;Name=WP_038423956.1;Ontology_term=GO:0019700,GO:0008081;gbkey=CDS;gene=phnP;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=organic phosphonate catabolic process|0019700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224634.1;locus_tag=PHA56_RS26020;product=phosphonate metabolism protein PhnP;protein_id=WP_038423956.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5507286 5507618 . - . ID=gene-PHA56_RS26025;Name=yjdP;gbkey=Gene;gene=yjdP;gene_biotype=protein_coding;locus_tag=PHA56_RS26025;old_locus_tag=PHA56_26025 NZ_CP116214.1 Protein Homology CDS 5507286 5507618 . - 0 ID=cds-WP_038423955.1;Parent=gene-PHA56_RS26025;Dbxref=Genbank:WP_038423955.1;Name=WP_038423955.1;gbkey=CDS;gene=yjdP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224633.1;locus_tag=PHA56_RS26025;product=DDRRRQL repeat protein YjdP;protein_id=WP_038423955.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5507688 5508137 . - . ID=gene-PHA56_RS26030;Name=rpiB;gbkey=Gene;gene=rpiB;gene_biotype=protein_coding;gene_synonym=alsI;locus_tag=PHA56_RS26030;old_locus_tag=PHA56_26030 NZ_CP116214.1 Protein Homology CDS 5507688 5508137 . - 0 ID=cds-WP_004097854.1;Parent=gene-PHA56_RS26030;Dbxref=Genbank:WP_004097854.1;Name=WP_004097854.1;gbkey=CDS;gene=rpiB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014227576.1;locus_tag=PHA56_RS26030;product=bifunctional allose-6-phosphate isomerase/ribose-5-phosphate isomerase RpiB;protein_id=WP_004097854.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5508501 5509388 . + . ID=gene-PHA56_RS26035;Name=PHA56_RS26035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS26035;old_locus_tag=PHA56_26035 NZ_CP116214.1 Protein Homology CDS 5508501 5509388 . + 0 ID=cds-WP_004097852.1;Parent=gene-PHA56_RS26035;Dbxref=Genbank:WP_004097852.1;Name=WP_004097852.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418513.4;locus_tag=PHA56_RS26035;product=transcriptional repressor AlsR;protein_id=WP_004097852.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5509448 5510383 . + . ID=gene-PHA56_RS26040;Name=alsB;gbkey=Gene;gene=alsB;gene_biotype=protein_coding;locus_tag=PHA56_RS26040;old_locus_tag=PHA56_26040 NZ_CP116214.1 Protein Homology CDS 5509448 5510383 . + 0 ID=cds-WP_014837154.1;Parent=gene-PHA56_RS26040;Dbxref=Genbank:WP_014837154.1;Name=WP_014837154.1;gbkey=CDS;gene=alsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418512.1;locus_tag=PHA56_RS26040;product=D-allose transporter substrate-binding protein;protein_id=WP_014837154.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5510449 5511981 . + . ID=gene-PHA56_RS26045;Name=alsA;gbkey=Gene;gene=alsA;gene_biotype=protein_coding;locus_tag=PHA56_RS26045;old_locus_tag=PHA56_26045 NZ_CP116214.1 Protein Homology CDS 5510449 5511981 . + 0 ID=cds-WP_014837153.1;Parent=gene-PHA56_RS26045;Dbxref=Genbank:WP_014837153.1;Name=WP_014837153.1;gbkey=CDS;gene=alsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418511.1;locus_tag=PHA56_RS26045;product=D-allose ABC transporter ATP-binding protein AlsA;protein_id=WP_014837153.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5511960 5512940 . + . ID=gene-PHA56_RS26050;Name=alsC;gbkey=Gene;gene=alsC;gene_biotype=protein_coding;locus_tag=PHA56_RS26050;old_locus_tag=PHA56_26050 NZ_CP116214.1 Protein Homology CDS 5511960 5512940 . + 0 ID=cds-WP_038423954.1;Parent=gene-PHA56_RS26050;Dbxref=Genbank:WP_038423954.1;Name=WP_038423954.1;gbkey=CDS;gene=alsC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418510.1;locus_tag=PHA56_RS26050;product=D-allose ABC transporter permease;protein_id=WP_038423954.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5512951 5513646 . + . ID=gene-PHA56_RS26055;Name=alsE;gbkey=Gene;gene=alsE;gene_biotype=protein_coding;locus_tag=PHA56_RS26055;old_locus_tag=PHA56_26055 NZ_CP116214.1 Protein Homology CDS 5512951 5513646 . + 0 ID=cds-WP_032695089.1;Parent=gene-PHA56_RS26055;Dbxref=Genbank:WP_032695089.1;Name=WP_032695089.1;gbkey=CDS;gene=alsE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418509.1;locus_tag=PHA56_RS26055;product=D-allulose 6-phosphate 3-epimerase;protein_id=WP_032695089.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5513630 5514541 . + . ID=gene-PHA56_RS26060;Name=alsK;gbkey=Gene;gene=alsK;gene_biotype=protein_coding;locus_tag=PHA56_RS26060;old_locus_tag=PHA56_26060 NZ_CP116214.1 Protein Homology CDS 5513630 5514541 . + 0 ID=cds-WP_038423953.1;Parent=gene-PHA56_RS26060;Dbxref=Genbank:WP_038423953.1;Name=WP_038423953.1;Ontology_term=GO:0019316,GO:0019200;gbkey=CDS;gene=alsK;go_function=carbohydrate kinase activity|0019200||IEA;go_process=D-allose catabolic process|0019316||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004117280.1;locus_tag=PHA56_RS26060;product=allose kinase;protein_id=WP_038423953.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5514799 5516946 . + . ID=gene-PHA56_RS26065;Name=fdhF;gbkey=Gene;gene=fdhF;gene_biotype=protein_coding;locus_tag=PHA56_RS26065;old_locus_tag=PHA56_26065 NZ_CP116214.1 Protein Homology CDS 5514799 5516946 . + 0 ID=cds-WP_077598960.1;Parent=gene-PHA56_RS26065;Dbxref=Genbank:WP_077598960.1;Name=WP_077598960.1;Ontology_term=GO:0015942,GO:0008863,GO:0009326;gbkey=CDS;gene=fdhF;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA;go_process=formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463150.1;locus_tag=PHA56_RS26065;product=formate dehydrogenase subunit alpha;protein_id=WP_077598960.1;transl_except=(pos:5515216..5515218%2Caa:Sec);transl_table=11 NZ_CP116214.1 RefSeq gene 5517153 5517836 . + . ID=gene-PHA56_RS26070;Name=PHA56_RS26070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS26070;old_locus_tag=PHA56_26070 NZ_CP116214.1 Protein Homology CDS 5517153 5517836 . + 0 ID=cds-WP_038423951.1;Parent=gene-PHA56_RS26070;Dbxref=Genbank:WP_038423951.1;Name=WP_038423951.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016808421.1;locus_tag=PHA56_RS26070;product=tetratricopeptide repeat protein;protein_id=WP_038423951.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5517873 5519186 . - . ID=gene-PHA56_RS26075;Name=gltP;gbkey=Gene;gene=gltP;gene_biotype=protein_coding;locus_tag=PHA56_RS26075;old_locus_tag=PHA56_26075 NZ_CP116214.1 Protein Homology CDS 5517873 5519186 . - 0 ID=cds-WP_004109428.1;Parent=gene-PHA56_RS26075;Dbxref=Genbank:WP_004109428.1;Name=WP_004109428.1;Ontology_term=GO:0006835,GO:0015293,GO:0016020;gbkey=CDS;gene=gltP;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=dicarboxylic acid transport|0006835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224620.1;locus_tag=PHA56_RS26075;product=glutamate/aspartate:proton symporter GltP;protein_id=WP_004109428.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5519598 5521556 . + . ID=gene-PHA56_RS26080;Name=acs;gbkey=Gene;gene=acs;gene_biotype=protein_coding;locus_tag=PHA56_RS26080;old_locus_tag=PHA56_26080 NZ_CP116214.1 Protein Homology CDS 5519598 5521556 . + 0 ID=cds-WP_038423950.1;Parent=gene-PHA56_RS26080;Dbxref=Genbank:WP_038423950.1;Name=WP_038423950.1;Ontology_term=GO:0019427,GO:0003987;gbkey=CDS;gene=acs;go_function=acetate-CoA ligase activity|0003987||IEA;go_process=acetyl-CoA biosynthetic process from acetate|0019427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224618.1;locus_tag=PHA56_RS26080;product=acetate--CoA ligase;protein_id=WP_038423950.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5521737 5522051 . + . ID=gene-PHA56_RS26085;Name=PHA56_RS26085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS26085;old_locus_tag=PHA56_26085 NZ_CP116214.1 Protein Homology CDS 5521737 5522051 . + 0 ID=cds-WP_025107683.1;Parent=gene-PHA56_RS26085;Dbxref=Genbank:WP_025107683.1;Name=WP_025107683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006177369.1;locus_tag=PHA56_RS26085;product=DUF485 domain-containing protein;protein_id=WP_025107683.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5522048 5523697 . + . ID=gene-PHA56_RS26090;Name=actP;gbkey=Gene;gene=actP;gene_biotype=protein_coding;locus_tag=PHA56_RS26090;old_locus_tag=PHA56_26090 NZ_CP116214.1 Protein Homology CDS 5522048 5523697 . + 0 ID=cds-WP_014227565.1;Parent=gene-PHA56_RS26090;Dbxref=Genbank:WP_014227565.1;Name=WP_014227565.1;Ontology_term=GO:0006814,GO:0015370,GO:0031402,GO:0005886;gbkey=CDS;gene=actP;go_component=plasma membrane|0005886||IEA;go_function=solute:sodium symporter activity|0015370||IEA,sodium ion binding|0031402||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418491.1;locus_tag=PHA56_RS26090;product=cation/acetate symporter ActP;protein_id=WP_014227565.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5523751 5524845 . - . ID=gene-PHA56_RS26095;Name=PHA56_RS26095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS26095;old_locus_tag=PHA56_26095 NZ_CP116214.1 Protein Homology CDS 5523751 5524845 . - 0 ID=cds-WP_032695084.1;Parent=gene-PHA56_RS26095;Dbxref=Genbank:WP_032695084.1;Name=WP_032695084.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014908100.1;locus_tag=PHA56_RS26095;product=type 1 fimbrial protein;protein_id=WP_032695084.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5524879 5525415 . - . ID=gene-PHA56_RS26100;Name=PHA56_RS26100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS26100;old_locus_tag=PHA56_26100 NZ_CP116214.1 Protein Homology CDS 5524879 5525415 . - 0 ID=cds-WP_223226775.1;Parent=gene-PHA56_RS26100;Dbxref=Genbank:WP_223226775.1;Name=WP_223226775.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009652713.1;locus_tag=PHA56_RS26100;product=fimbrial protein;protein_id=WP_223226775.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5525490 5528078 . - . ID=gene-PHA56_RS26105;Name=PHA56_RS26105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS26105;old_locus_tag=PHA56_26105 NZ_CP116214.1 Protein Homology CDS 5525490 5528078 . - 0 ID=cds-WP_038423949.1;Parent=gene-PHA56_RS26105;Dbxref=Genbank:WP_038423949.1;Name=WP_038423949.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004178294.1;locus_tag=PHA56_RS26105;product=fimbrial biogenesis outer membrane usher protein;protein_id=WP_038423949.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5528032 5528718 . - . ID=gene-PHA56_RS26110;Name=PHA56_RS26110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS26110;old_locus_tag=PHA56_26110 NZ_CP116214.1 Protein Homology CDS 5528032 5528718 . - 0 ID=cds-WP_032695081.1;Parent=gene-PHA56_RS26110;Dbxref=Genbank:WP_032695081.1;Name=WP_032695081.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004097828.1;locus_tag=PHA56_RS26110;product=fimbrial assembly chaperone;protein_id=WP_032695081.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5528771 5529310 . - . ID=gene-PHA56_RS26115;Name=PHA56_RS26115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS26115;old_locus_tag=PHA56_26115 NZ_CP116214.1 Protein Homology CDS 5528771 5529310 . - 0 ID=cds-WP_014837143.1;Parent=gene-PHA56_RS26115;Dbxref=Genbank:WP_014837143.1;Name=WP_014837143.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004151736.1;locus_tag=PHA56_RS26115;product=fimbrial protein;protein_id=WP_014837143.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5529908 5530597 . - . ID=gene-PHA56_RS26120;Name=PHA56_RS26120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS26120;old_locus_tag=PHA56_26120 NZ_CP116214.1 Protein Homology CDS 5529908 5530597 . - 0 ID=cds-WP_014837142.1;Parent=gene-PHA56_RS26120;Dbxref=Genbank:WP_014837142.1;Name=WP_014837142.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224609.1;locus_tag=PHA56_RS26120;product=LrgB family protein;protein_id=WP_014837142.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5530590 5531000 . - . ID=gene-PHA56_RS26125;Name=PHA56_RS26125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS26125;old_locus_tag=PHA56_26125 NZ_CP116214.1 Protein Homology CDS 5530590 5531000 . - 0 ID=cds-WP_004097823.1;Parent=gene-PHA56_RS26125;Dbxref=Genbank:WP_004097823.1;Name=WP_004097823.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132599.1;locus_tag=PHA56_RS26125;product=CidA/LrgA family protein;protein_id=WP_004097823.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5531104 5531985 . + . ID=gene-PHA56_RS26130;Name=PHA56_RS26130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS26130;old_locus_tag=PHA56_26130 NZ_CP116214.1 Protein Homology CDS 5531104 5531985 . + 0 ID=cds-WP_014227557.1;Parent=gene-PHA56_RS26130;Dbxref=Genbank:WP_014227557.1;Name=WP_014227557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224607.1;locus_tag=PHA56_RS26130;product=LysR family transcriptional regulator;protein_id=WP_014227557.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5532034 5533680 . - . ID=gene-PHA56_RS26135;Name=PHA56_RS26135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS26135;old_locus_tag=PHA56_26135 NZ_CP116214.1 Protein Homology CDS 5532034 5533680 . - 0 ID=cds-WP_032695080.1;Parent=gene-PHA56_RS26135;Dbxref=Genbank:WP_032695080.1;Name=WP_032695080.1;Ontology_term=GO:0006814,GO:0006885,GO:1902600,GO:0015385;gbkey=CDS;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,regulation of pH|0006885||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224606.1;locus_tag=PHA56_RS26135;product=Na+/H+ antiporter;protein_id=WP_032695080.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5533828 5535177 . - . ID=gene-PHA56_RS26140;Name=PHA56_RS26140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS26140;old_locus_tag=PHA56_26140 NZ_CP116214.1 Protein Homology CDS 5533828 5535177 . - 0 ID=cds-WP_014227555.1;Parent=gene-PHA56_RS26140;Dbxref=Genbank:WP_014227555.1;Name=WP_014227555.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132609.1;locus_tag=PHA56_RS26140;product=NCS2 family permease;protein_id=WP_014227555.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5535566 5536234 . - . ID=gene-PHA56_RS26145;Name=PHA56_RS26145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS26145;old_locus_tag=PHA56_26145 NZ_CP116214.1 Protein Homology CDS 5535566 5536234 . - 0 ID=cds-WP_014227554.1;Parent=gene-PHA56_RS26145;Dbxref=Genbank:WP_014227554.1;Name=WP_014227554.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004137527.1;locus_tag=PHA56_RS26145;product=glutathione S-transferase;protein_id=WP_014227554.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5536492 5536950 . - . ID=gene-PHA56_RS26150;Name=soxR;gbkey=Gene;gene=soxR;gene_biotype=protein_coding;locus_tag=PHA56_RS26150;old_locus_tag=PHA56_26150 NZ_CP116214.1 Protein Homology CDS 5536492 5536950 . - 0 ID=cds-WP_004097815.1;Parent=gene-PHA56_RS26150;Dbxref=Genbank:WP_004097815.1;Name=WP_004097815.1;Ontology_term=GO:0006355,GO:0006979,GO:0003677,GO:0003700,GO:0051537;gbkey=CDS;gene=soxR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224603.1;locus_tag=PHA56_RS26150;product=redox-sensitive transcriptional activator SoxR;protein_id=WP_004097815.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5537035 5537364 . + . ID=gene-PHA56_RS26155;Name=soxS;gbkey=Gene;gene=soxS;gene_biotype=protein_coding;locus_tag=PHA56_RS26155;old_locus_tag=PHA56_26155 NZ_CP116214.1 Protein Homology CDS 5537035 5537364 . + 0 ID=cds-WP_004097813.1;Parent=gene-PHA56_RS26155;Dbxref=Genbank:WP_004097813.1;Name=WP_004097813.1;gbkey=CDS;gene=soxS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224602.1;locus_tag=PHA56_RS26155;product=superoxide response transcriptional regulator SoxS;protein_id=WP_004097813.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5537349 5538953 . - . ID=gene-PHA56_RS26160;Name=PHA56_RS26160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS26160;old_locus_tag=PHA56_26160 NZ_CP116214.1 Protein Homology CDS 5537349 5538953 . - 0 ID=cds-WP_038423948.1;Parent=gene-PHA56_RS26160;Dbxref=Genbank:WP_038423948.1;Name=WP_038423948.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004178291.1;locus_tag=PHA56_RS26160;product=EAL domain-containing protein;protein_id=WP_038423948.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5539497 5539778 . + . ID=gene-PHA56_RS26165;Name=PHA56_RS26165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS26165;old_locus_tag=PHA56_26165 NZ_CP116214.1 Protein Homology CDS 5539497 5539778 . + 0 ID=cds-WP_004097808.1;Parent=gene-PHA56_RS26165;Dbxref=Genbank:WP_004097808.1;Name=WP_004097808.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224600.1;locus_tag=PHA56_RS26165;product=YjcB family protein;protein_id=WP_004097808.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5539935 5540324 . - . ID=gene-PHA56_RS26170;Name=iraM;gbkey=Gene;gene=iraM;gene_biotype=protein_coding;locus_tag=PHA56_RS26170;old_locus_tag=PHA56_26170 NZ_CP116214.1 Protein Homology CDS 5539935 5540324 . - 0 ID=cds-WP_004097807.1;Parent=gene-PHA56_RS26170;Dbxref=Genbank:WP_004097807.1;Name=WP_004097807.1;gbkey=CDS;gene=iraM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004097807.1;locus_tag=PHA56_RS26170;product=anti-adapter protein IraM;protein_id=WP_004097807.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5540644 5543067 . - . ID=gene-PHA56_RS26175;Name=bamA;gbkey=Gene;gene=bamA;gene_biotype=protein_coding;locus_tag=PHA56_RS26175;old_locus_tag=PHA56_26175 NZ_CP116214.1 Protein Homology CDS 5540644 5543067 . - 0 ID=cds-WP_025107695.1;Parent=gene-PHA56_RS26175;Dbxref=Genbank:WP_025107695.1;Name=WP_025107695.1;Ontology_term=GO:0009279;gbkey=CDS;gene=bamA;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224591.1;locus_tag=PHA56_RS26175;product=outer membrane protein assembly factor BamA;protein_id=WP_025107695.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5543513 5543863 . + . ID=gene-PHA56_RS26180;Name=PHA56_RS26180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS26180;old_locus_tag=PHA56_26180 NZ_CP116214.1 Protein Homology CDS 5543513 5543863 . + 0 ID=cds-WP_014227551.1;Parent=gene-PHA56_RS26180;Dbxref=Genbank:WP_014227551.1;Name=WP_014227551.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014227551.1;locus_tag=PHA56_RS26180;product=AraC family transcriptional regulator;protein_id=WP_014227551.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5544133 5546394 . - . ID=gene-PHA56_RS26185;Name=PHA56_RS26185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS26185;old_locus_tag=PHA56_26185 NZ_CP116214.1 Protein Homology CDS 5544133 5546394 . - 0 ID=cds-WP_014227550.1;Parent=gene-PHA56_RS26185;Dbxref=Genbank:WP_014227550.1;Name=WP_014227550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224586.1;locus_tag=PHA56_RS26185;product=TonB-dependent siderophore receptor;protein_id=WP_014227550.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5546990 5548657 . + . ID=gene-PHA56_RS26190;Name=PHA56_RS26190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS26190;old_locus_tag=PHA56_26190 NZ_CP116214.1 Protein Homology CDS 5546990 5548657 . + 0 ID=cds-WP_224266799.1;Parent=gene-PHA56_RS26190;Dbxref=Genbank:WP_224266799.1;Name=WP_224266799.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014227549.1;locus_tag=PHA56_RS26190;product=lytic transglycosylase F;protein_id=WP_224266799.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5548744 5549271 . - . ID=gene-PHA56_RS26195;Name=ssb1;gbkey=Gene;gene=ssb1;gene_biotype=protein_coding;locus_tag=PHA56_RS26195;old_locus_tag=PHA56_26195 NZ_CP116214.1 Protein Homology CDS 5548744 5549271 . - 0 ID=cds-WP_004097799.1;Parent=gene-PHA56_RS26195;Dbxref=Genbank:WP_004097799.1;Name=WP_004097799.1;gbkey=CDS;gene=ssb1;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224583.1;locus_tag=PHA56_RS26195;product=single-stranded DNA-binding protein SSB1;protein_id=WP_004097799.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5549518 5552343 . + . ID=gene-PHA56_RS26200;Name=uvrA;gbkey=Gene;gene=uvrA;gene_biotype=protein_coding;locus_tag=PHA56_RS26200;old_locus_tag=PHA56_26200 NZ_CP116214.1 Protein Homology CDS 5549518 5552343 . + 0 ID=cds-WP_004097797.1;Parent=gene-PHA56_RS26200;Dbxref=Genbank:WP_004097797.1;Name=WP_004097797.1;Ontology_term=GO:0006289,GO:0003677,GO:0005524,GO:0016887;gbkey=CDS;gene=uvrA;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224582.1;locus_tag=PHA56_RS26200;product=excinuclease ABC subunit UvrA;protein_id=WP_004097797.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5552476 5552886 . + . ID=gene-PHA56_RS26205;Name=PHA56_RS26205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS26205;old_locus_tag=PHA56_26205 NZ_CP116214.1 Protein Homology CDS 5552476 5552886 . + 0 ID=cds-WP_014837137.1;Parent=gene-PHA56_RS26205;Dbxref=Genbank:WP_014837137.1;Name=WP_014837137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004097795.1;locus_tag=PHA56_RS26205;product=hypothetical protein;protein_id=WP_014837137.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5552889 5553206 . + . ID=gene-PHA56_RS26210;Name=PHA56_RS26210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS26210;old_locus_tag=PHA56_26210 NZ_CP116214.1 Protein Homology CDS 5552889 5553206 . + 0 ID=cds-WP_004097794.1;Parent=gene-PHA56_RS26210;Dbxref=Genbank:WP_004097794.1;Name=WP_004097794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004097794.1;locus_tag=PHA56_RS26210;product=hypothetical protein;protein_id=WP_004097794.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5553209 5553562 . - . ID=gene-PHA56_RS26215;Name=PHA56_RS26215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS26215;old_locus_tag=PHA56_26215 NZ_CP116214.1 Protein Homology CDS 5553209 5553562 . - 0 ID=cds-WP_004097793.1;Parent=gene-PHA56_RS26215;Dbxref=Genbank:WP_004097793.1;Name=WP_004097793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004097793.1;locus_tag=PHA56_RS26215;product=MmcQ/YjbR family DNA-binding protein;protein_id=WP_004097793.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5553565 5553981 . - . ID=gene-PHA56_RS26220;Name=PHA56_RS26220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS26220;old_locus_tag=PHA56_26220 NZ_CP116214.1 Protein Homology CDS 5553565 5553981 . - 0 ID=cds-WP_038423946.1;Parent=gene-PHA56_RS26220;Dbxref=Genbank:WP_038423946.1;Name=WP_038423946.1;Ontology_term=GO:0008150,GO:0003824,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=catalytic activity|0003824||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224580.1;locus_tag=PHA56_RS26220;product=secondary thiamine-phosphate synthase enzyme YjbQ;protein_id=WP_038423946.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5554125 5554838 . - . ID=gene-PHA56_RS26225;Name=aphA;gbkey=Gene;gene=aphA;gene_biotype=protein_coding;locus_tag=PHA56_RS26225;old_locus_tag=PHA56_26225 NZ_CP116214.1 Protein Homology CDS 5554125 5554838 . - 0 ID=cds-WP_004097791.1;Parent=gene-PHA56_RS26225;Dbxref=Genbank:WP_004097791.1;Name=WP_004097791.1;Ontology_term=GO:0003993;gbkey=CDS;gene=aphA;go_function=acid phosphatase activity|0003993||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224579.1;locus_tag=PHA56_RS26225;product=acid phosphatase AphA;protein_id=WP_004097791.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5555033 5556226 . - . ID=gene-PHA56_RS26230;Name=tyrB;gbkey=Gene;gene=tyrB;gene_biotype=protein_coding;locus_tag=PHA56_RS26230;old_locus_tag=PHA56_26230 NZ_CP116214.1 Protein Homology CDS 5555033 5556226 . - 0 ID=cds-WP_032747494.1;Parent=gene-PHA56_RS26230;Dbxref=Genbank:WP_032747494.1;Name=WP_032747494.1;gbkey=CDS;gene=tyrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313063.1;locus_tag=PHA56_RS26230;product=aromatic amino acid transaminase;protein_id=WP_032747494.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5556464 5557543 . - . ID=gene-PHA56_RS26235;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=PHA56_RS26235;old_locus_tag=PHA56_26235 NZ_CP116214.1 Protein Homology CDS 5556464 5557543 . - 0 ID=cds-WP_014837135.1;Parent=gene-PHA56_RS26235;Dbxref=Genbank:WP_014837135.1;Name=WP_014837135.1;Ontology_term=GO:0009252,GO:0008784;gbkey=CDS;gene=alr;go_function=alanine racemase activity|0008784||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224577.1;locus_tag=PHA56_RS26235;product=alanine racemase;protein_id=WP_014837135.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5557689 5559104 . - . ID=gene-PHA56_RS26240;Name=dnaB;gbkey=Gene;gene=dnaB;gene_biotype=protein_coding;locus_tag=PHA56_RS26240;old_locus_tag=PHA56_26240 NZ_CP116214.1 Protein Homology CDS 5557689 5559104 . - 0 ID=cds-WP_004097788.1;Parent=gene-PHA56_RS26240;Dbxref=Genbank:WP_004097788.1;Name=WP_004097788.1;gbkey=CDS;gene=dnaB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224576.1;locus_tag=PHA56_RS26240;product=replicative DNA helicase;protein_id=WP_004097788.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5559166 5560149 . + . ID=gene-PHA56_RS26245;Name=PHA56_RS26245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS26245;old_locus_tag=PHA56_26245 NZ_CP116214.1 Protein Homology CDS 5559166 5560149 . + 0 ID=cds-WP_014227544.1;Parent=gene-PHA56_RS26245;Dbxref=Genbank:WP_014227544.1;Name=WP_014227544.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313060.1;locus_tag=PHA56_RS26245;product=quinone oxidoreductase;protein_id=WP_014227544.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5560453 5560695 . - . ID=gene-PHA56_RS26250;Name=pspG;gbkey=Gene;gene=pspG;gene_biotype=protein_coding;locus_tag=PHA56_RS26250;old_locus_tag=PHA56_26250 NZ_CP116214.1 Protein Homology CDS 5560453 5560695 . - 0 ID=cds-WP_014227543.1;Parent=gene-PHA56_RS26250;Dbxref=Genbank:WP_014227543.1;Name=WP_014227543.1;gbkey=CDS;gene=pspG;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224574.1;locus_tag=PHA56_RS26250;product=envelope stress response protein PspG;protein_id=WP_014227543.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5560836 5561834 . - . ID=gene-PHA56_RS26255;Name=dusA;gbkey=Gene;gene=dusA;gene_biotype=protein_coding;locus_tag=PHA56_RS26255;old_locus_tag=PHA56_26255 NZ_CP116214.1 Protein Homology CDS 5560836 5561834 . - 0 ID=cds-WP_119834370.1;Parent=gene-PHA56_RS26255;Dbxref=Genbank:WP_119834370.1;Name=WP_119834370.1;Ontology_term=GO:0002943,GO:0017150,GO:0050660;gbkey=CDS;gene=dusA;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA dihydrouridine synthesis|0002943||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224573.1;locus_tag=PHA56_RS26255;product=tRNA dihydrouridine(20/20a) synthase DusA;protein_id=WP_119834370.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5561939 5562427 . - . ID=gene-PHA56_RS26260;Name=PHA56_RS26260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS26260;old_locus_tag=PHA56_26260 NZ_CP116214.1 Protein Homology CDS 5561939 5562427 . - 0 ID=cds-WP_014227541.1;Parent=gene-PHA56_RS26260;Dbxref=Genbank:WP_014227541.1;Name=WP_014227541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014227541.1;locus_tag=PHA56_RS26260;product=cupin domain-containing protein;protein_id=WP_014227541.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5562629 5563144 . + . ID=gene-PHA56_RS26265;Name=zur;gbkey=Gene;gene=zur;gene_biotype=protein_coding;locus_tag=PHA56_RS26265;old_locus_tag=PHA56_26265 NZ_CP116214.1 Protein Homology CDS 5562629 5563144 . + 0 ID=cds-WP_004097781.1;Parent=gene-PHA56_RS26265;Dbxref=Genbank:WP_004097781.1;Name=WP_004097781.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=zur;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224570.1;locus_tag=PHA56_RS26265;product=zinc uptake transcriptional repressor Zur;protein_id=WP_004097781.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5563210 5563419 . - . ID=gene-PHA56_RS26270;Name=PHA56_RS26270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS26270;old_locus_tag=PHA56_26270 NZ_CP116214.1 Protein Homology CDS 5563210 5563419 . - 0 ID=cds-WP_004137568.1;Parent=gene-PHA56_RS26270;Dbxref=Genbank:WP_004137568.1;Name=WP_004137568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224569.1;locus_tag=PHA56_RS26270;product=CsbD family protein;protein_id=WP_004137568.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5563556 5564872 . - . ID=gene-PHA56_RS26275;Name=dinF;gbkey=Gene;gene=dinF;gene_biotype=protein_coding;locus_tag=PHA56_RS26275;old_locus_tag=PHA56_26275 NZ_CP116214.1 Protein Homology CDS 5563556 5564872 . - 0 ID=cds-WP_038424935.1;Parent=gene-PHA56_RS26275;Dbxref=Genbank:WP_038424935.1;Name=WP_038424935.1;Ontology_term=GO:0055085,GO:0015297,GO:0042910,GO:0016020;gbkey=CDS;gene=dinF;go_component=membrane|0016020||IEA;go_function=antiporter activity|0015297||IEA,xenobiotic transmembrane transporter activity|0042910||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224567.1;locus_tag=PHA56_RS26275;product=MATE family efflux transporter DinF;protein_id=WP_038424935.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5564945 5565553 . - . ID=gene-PHA56_RS26280;Name=lexA;gbkey=Gene;gene=lexA;gene_biotype=protein_coding;locus_tag=PHA56_RS26280;old_locus_tag=PHA56_26280 NZ_CP116214.1 Protein Homology CDS 5564945 5565553 . - 0 ID=cds-WP_004097774.1;Parent=gene-PHA56_RS26280;Dbxref=Genbank:WP_004097774.1;Name=WP_004097774.1;Ontology_term=GO:0006282,GO:0006355,GO:0004252;gbkey=CDS;gene=lexA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=regulation of DNA repair|0006282||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004097774.1;locus_tag=PHA56_RS26280;product=transcriptional repressor LexA;protein_id=WP_004097774.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5565676 5566044 . - . ID=gene-PHA56_RS26285;Name=PHA56_RS26285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS26285;old_locus_tag=PHA56_26285 NZ_CP116214.1 Protein Homology CDS 5565676 5566044 . - 0 ID=cds-WP_014227539.1;Parent=gene-PHA56_RS26285;Dbxref=Genbank:WP_014227539.1;Name=WP_014227539.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017382619.1;locus_tag=PHA56_RS26285;product=diacylglycerol kinase;protein_id=WP_014227539.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5566174 5568597 . + . ID=gene-PHA56_RS26290;Name=plsB;gbkey=Gene;gene=plsB;gene_biotype=protein_coding;locus_tag=PHA56_RS26290;old_locus_tag=PHA56_26290 NZ_CP116214.1 Protein Homology CDS 5566174 5568597 . + 0 ID=cds-WP_004097770.1;Parent=gene-PHA56_RS26290;Dbxref=Genbank:WP_004097770.1;Name=WP_004097770.1;Ontology_term=GO:0008654,GO:0004366;gbkey=CDS;gene=plsB;go_function=glycerol-3-phosphate O-acyltransferase activity|0004366||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224564.1;locus_tag=PHA56_RS26290;product=glycerol-3-phosphate 1-O-acyltransferase PlsB;protein_id=WP_004097770.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5568696 5569565 . - . ID=gene-PHA56_RS26295;Name=ubiA;gbkey=Gene;gene=ubiA;gene_biotype=protein_coding;locus_tag=PHA56_RS26295;old_locus_tag=PHA56_26295 NZ_CP116214.1 Protein Homology CDS 5568696 5569565 . - 0 ID=cds-WP_014227538.1;Parent=gene-PHA56_RS26295;Dbxref=Genbank:WP_014227538.1;Name=WP_014227538.1;Ontology_term=GO:0006744,GO:0008412;gbkey=CDS;gene=ubiA;go_function=4-hydroxybenzoate octaprenyltransferase activity|0008412||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014227538.1;locus_tag=PHA56_RS26295;product=4-hydroxybenzoate octaprenyltransferase;protein_id=WP_014227538.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5569578 5570075 . - . ID=gene-PHA56_RS26300;Name=ubiC;gbkey=Gene;gene=ubiC;gene_biotype=protein_coding;locus_tag=PHA56_RS26300;old_locus_tag=PHA56_26300 NZ_CP116214.1 Protein Homology CDS 5569578 5570075 . - 0 ID=cds-WP_014227537.1;Parent=gene-PHA56_RS26300;Dbxref=Genbank:WP_014227537.1;Name=WP_014227537.1;Ontology_term=GO:0008813;gbkey=CDS;gene=ubiC;go_function=chorismate lyase activity|0008813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224562.1;locus_tag=PHA56_RS26300;product=chorismate lyase;protein_id=WP_014227537.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5570264 5571181 . - . ID=gene-PHA56_RS26305;Name=malM;gbkey=Gene;gene=malM;gene_biotype=protein_coding;locus_tag=PHA56_RS26305;old_locus_tag=PHA56_26305 NZ_CP116214.1 Protein Homology CDS 5570264 5571181 . - 0 ID=cds-WP_038423945.1;Parent=gene-PHA56_RS26305;Dbxref=Genbank:WP_038423945.1;Name=WP_038423945.1;Ontology_term=GO:0008643,GO:0042597;gbkey=CDS;gene=malM;go_component=periplasmic space|0042597||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224561.1;locus_tag=PHA56_RS26305;product=maltose operon protein MalM;protein_id=WP_038423945.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5571293 5572582 . - . ID=gene-PHA56_RS26310;Name=PHA56_RS26310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS26310;old_locus_tag=PHA56_26310 NZ_CP116214.1 Protein Homology CDS 5571293 5572582 . - 0 ID=cds-WP_014227535.1;Parent=gene-PHA56_RS26310;Dbxref=Genbank:WP_014227535.1;Name=WP_014227535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224560.1;locus_tag=PHA56_RS26310;product=maltoporin;protein_id=WP_014227535.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5572754 5573863 . - . ID=gene-PHA56_RS26315;Name=malK;gbkey=Gene;gene=malK;gene_biotype=protein_coding;locus_tag=PHA56_RS26315;old_locus_tag=PHA56_26315 NZ_CP116214.1 Protein Homology CDS 5572754 5573863 . - 0 ID=cds-WP_004097762.1;Parent=gene-PHA56_RS26315;Dbxref=Genbank:WP_004097762.1;Name=WP_004097762.1;Ontology_term=GO:0008643,GO:0055085,GO:0005524,GO:0140359,GO:0043190;gbkey=CDS;gene=malK;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011915502.1;locus_tag=PHA56_RS26315;product=maltose/maltodextrin ABC transporter ATP-binding protein MalK;protein_id=WP_004097762.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5574234 5575424 . + . ID=gene-PHA56_RS26320;Name=malE;gbkey=Gene;gene=malE;gene_biotype=protein_coding;locus_tag=PHA56_RS26320;old_locus_tag=PHA56_26320 NZ_CP116214.1 Protein Homology CDS 5574234 5575424 . + 0 ID=cds-WP_014227534.1;Parent=gene-PHA56_RS26320;Dbxref=Genbank:WP_014227534.1;Name=WP_014227534.1;Ontology_term=GO:0008643,GO:0055085,GO:0015144;gbkey=CDS;gene=malE;go_function=carbohydrate transmembrane transporter activity|0015144||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000695396.1;locus_tag=PHA56_RS26320;product=maltose/maltodextrin ABC transporter substrate-binding protein MalE;protein_id=WP_014227534.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5575611 5577155 . + . ID=gene-PHA56_RS26325;Name=malF;gbkey=Gene;gene=malF;gene_biotype=protein_coding;locus_tag=PHA56_RS26325;old_locus_tag=PHA56_26325 NZ_CP116214.1 Protein Homology CDS 5575611 5577155 . + 0 ID=cds-WP_014227533.1;Parent=gene-PHA56_RS26325;Dbxref=Genbank:WP_014227533.1;Name=WP_014227533.1;Ontology_term=GO:0055085,GO:0043190;gbkey=CDS;gene=malF;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224557.1;locus_tag=PHA56_RS26325;product=maltose ABC transporter permease MalF;protein_id=WP_014227533.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5577170 5578060 . + . ID=gene-PHA56_RS26330;Name=malG;gbkey=Gene;gene=malG;gene_biotype=protein_coding;locus_tag=PHA56_RS26330;old_locus_tag=PHA56_26330 NZ_CP116214.1 Protein Homology CDS 5577170 5578060 . + 0 ID=cds-WP_004109572.1;Parent=gene-PHA56_RS26330;Dbxref=Genbank:WP_004109572.1;Name=WP_004109572.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=malG;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224556.1;locus_tag=PHA56_RS26330;product=maltose ABC transporter permease MalG;protein_id=WP_004109572.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5578252 5578662 . - . ID=gene-PHA56_RS26335;Name=psiE;gbkey=Gene;gene=psiE;gene_biotype=protein_coding;locus_tag=PHA56_RS26335;old_locus_tag=PHA56_26335 NZ_CP116214.1 Protein Homology CDS 5578252 5578662 . - 0 ID=cds-WP_004097754.1;Parent=gene-PHA56_RS26335;Dbxref=Genbank:WP_004097754.1;Name=WP_004097754.1;gbkey=CDS;gene=psiE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224555.1;locus_tag=PHA56_RS26335;product=phosphate-starvation-inducible protein PsiE;protein_id=WP_004097754.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5579040 5580317 . + . ID=gene-PHA56_RS26340;Name=PHA56_RS26340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS26340;old_locus_tag=PHA56_26340 NZ_CP116214.1 Protein Homology CDS 5579040 5580317 . + 0 ID=cds-WP_119834369.1;Parent=gene-PHA56_RS26340;Dbxref=Genbank:WP_119834369.1;Name=WP_119834369.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224554.1;locus_tag=PHA56_RS26340;product=L-serine ammonia-lyase%2C iron-sulfur-dependent%2C subunit alpha;protein_id=WP_119834369.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5580385 5581122 . + . ID=gene-PHA56_RS26345;Name=PHA56_RS26345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS26345;old_locus_tag=PHA56_26345 NZ_CP116214.1 Protein Homology CDS 5580385 5581122 . + 0 ID=cds-WP_004097750.1;Parent=gene-PHA56_RS26345;Dbxref=Genbank:WP_004097750.1;Name=WP_004097750.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004127776.1;locus_tag=PHA56_RS26345;product=AzlC family ABC transporter permease;protein_id=WP_004097750.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5581115 5581435 . + . ID=gene-PHA56_RS26350;Name=PHA56_RS26350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS26350;old_locus_tag=PHA56_26350 NZ_CP116214.1 Protein Homology CDS 5581115 5581435 . + 0 ID=cds-WP_004097748.1;Parent=gene-PHA56_RS26350;Dbxref=Genbank:WP_004097748.1;Name=WP_004097748.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004873013.1;locus_tag=PHA56_RS26350;product=AzlD domain-containing protein;protein_id=WP_004097748.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5581461 5581838 . + . ID=gene-PHA56_RS26355;Name=PHA56_RS26355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS26355;old_locus_tag=PHA56_26355 NZ_CP116214.1 Protein Homology CDS 5581461 5581838 . + 0 ID=cds-WP_032719350.1;Parent=gene-PHA56_RS26355;Dbxref=Genbank:WP_032719350.1;Name=WP_032719350.1;Ontology_term=GO:0008152,GO:0019239;gbkey=CDS;go_function=deaminase activity|0019239||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004109587.1;locus_tag=PHA56_RS26355;product=Rid family detoxifying hydrolase;protein_id=WP_032719350.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5581949 5582458 . + . ID=gene-PHA56_RS26360;Name=PHA56_RS26360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS26360;old_locus_tag=PHA56_26360 NZ_CP116214.1 Protein Homology CDS 5581949 5582458 . + 0 ID=cds-WP_032695069.1;Parent=gene-PHA56_RS26360;Dbxref=Genbank:WP_032695069.1;Name=WP_032695069.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014227531.1;locus_tag=PHA56_RS26360;product=GNAT family N-acetyltransferase;protein_id=WP_032695069.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5582467 5582922 . + . ID=gene-PHA56_RS26365;Name=PHA56_RS26365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS26365;old_locus_tag=PHA56_26365 NZ_CP116214.1 Protein Homology CDS 5582467 5582922 . + 0 ID=cds-WP_004097740.1;Parent=gene-PHA56_RS26365;Dbxref=Genbank:WP_004097740.1;Name=WP_004097740.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224548.1;locus_tag=PHA56_RS26365;product=acyltransferase;protein_id=WP_004097740.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5582968 5584617 . - . ID=gene-PHA56_RS26370;Name=pgi;gbkey=Gene;gene=pgi;gene_biotype=protein_coding;locus_tag=PHA56_RS26370;old_locus_tag=PHA56_26370 NZ_CP116214.1 Protein Homology CDS 5582968 5584617 . - 0 ID=cds-WP_004097737.1;Parent=gene-PHA56_RS26370;Dbxref=Genbank:WP_004097737.1;Name=WP_004097737.1;Ontology_term=GO:0006094,GO:0006096,GO:0004347;gbkey=CDS;gene=pgi;go_function=glucose-6-phosphate isomerase activity|0004347||IEA;go_process=gluconeogenesis|0006094||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224547.1;locus_tag=PHA56_RS26370;product=glucose-6-phosphate isomerase;protein_id=WP_004097737.1;transl_table=11 NZ_CP116214.1 cmsearch riboswitch 5584970 5585203 . + . ID=id-NZ_CP116214.1:5584970..5585203;Dbxref=RFAM:RF00168;Note=Lysine riboswitch is most abundant in Firmicutes and Gammaproteobacteria where they are found upstream of a number of genes involved in lysine biosynthesis%2C transport and catabolism;bound_moiety=lysine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NZ_CP116214.1 RefSeq gene 5585384 5586733 . + . ID=gene-PHA56_RS26375;Name=lysC;gbkey=Gene;gene=lysC;gene_biotype=protein_coding;locus_tag=PHA56_RS26375;old_locus_tag=PHA56_26375 NZ_CP116214.1 Protein Homology CDS 5585384 5586733 . + 0 ID=cds-WP_004097732.1;Parent=gene-PHA56_RS26375;Dbxref=Genbank:WP_004097732.1;Name=WP_004097732.1;Ontology_term=GO:0009089,GO:0004072;gbkey=CDS;gene=lysC;go_function=aspartate kinase activity|0004072||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224546.1;locus_tag=PHA56_RS26375;product=lysine-sensitive aspartokinase 3;protein_id=WP_004097732.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5586773 5587561 . - . ID=gene-PHA56_RS26380;Name=PHA56_RS26380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS26380;old_locus_tag=PHA56_26380 NZ_CP116214.1 Protein Homology CDS 5586773 5587561 . - 0 ID=cds-WP_038424934.1;Parent=gene-PHA56_RS26380;Dbxref=Genbank:WP_038424934.1;Name=WP_038424934.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009653908.1;locus_tag=PHA56_RS26380;product=nucleotidyltransferase domain-containing protein;protein_id=WP_038424934.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5587567 5588694 . - . ID=gene-PHA56_RS26385;Name=PHA56_RS26385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS26385;old_locus_tag=PHA56_26385 NZ_CP116214.1 Protein Homology CDS 5587567 5588694 . - 0 ID=cds-WP_014227527.1;Parent=gene-PHA56_RS26385;Dbxref=Genbank:WP_014227527.1;Name=WP_014227527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000592028.1;locus_tag=PHA56_RS26385;product=slipin family protein;protein_id=WP_014227527.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5589140 5590720 . + . ID=gene-PHA56_RS26390;Name=rtcR;gbkey=Gene;gene=rtcR;gene_biotype=protein_coding;locus_tag=PHA56_RS26390;old_locus_tag=PHA56_26390 NZ_CP116214.1 Protein Homology CDS 5589140 5590720 . + 0 ID=cds-WP_038423943.1;Parent=gene-PHA56_RS26390;Dbxref=Genbank:WP_038423943.1;Name=WP_038423943.1;Ontology_term=GO:0006355,GO:0003700,GO:0005524,GO:0008134;gbkey=CDS;gene=rtcR;go_function=DNA-binding transcription factor activity|0003700||IEA,ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004137588.1;locus_tag=PHA56_RS26390;product=RNA repair transcriptional activator RtcR;protein_id=WP_038423943.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5590832 5591761 . + . ID=gene-PHA56_RS26395;Name=panS;gbkey=Gene;gene=panS;gene_biotype=protein_coding;locus_tag=PHA56_RS26395;old_locus_tag=PHA56_26395 NZ_CP116214.1 Protein Homology CDS 5590832 5591761 . + 0 ID=cds-WP_014227525.1;Parent=gene-PHA56_RS26395;Dbxref=Genbank:WP_014227525.1;Name=WP_014227525.1;gbkey=CDS;gene=panS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224545.1;locus_tag=PHA56_RS26395;product=ketopantoate/pantoate/pantothenate transporter PanS;protein_id=WP_014227525.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5591959 5592231 . + . ID=gene-PHA56_RS26400;Name=PHA56_RS26400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS26400;old_locus_tag=PHA56_26400 NZ_CP116214.1 Protein Homology CDS 5591959 5592231 . + 0 ID=cds-WP_009653910.1;Parent=gene-PHA56_RS26400;Dbxref=Genbank:WP_009653910.1;Name=WP_009653910.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463059.1;locus_tag=PHA56_RS26400;product=DUF3811 domain-containing protein;protein_id=WP_009653910.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5592228 5593100 . - . ID=gene-PHA56_RS26405;Name=rluF;gbkey=Gene;gene=rluF;gene_biotype=protein_coding;locus_tag=PHA56_RS26405;old_locus_tag=PHA56_26405 NZ_CP116214.1 Protein Homology CDS 5592228 5593100 . - 0 ID=cds-WP_014227524.1;Parent=gene-PHA56_RS26405;Dbxref=Genbank:WP_014227524.1;Name=WP_014227524.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=rluF;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224543.1;locus_tag=PHA56_RS26405;product=23S rRNA pseudouridine(2604) synthase RluF;protein_id=WP_014227524.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5593449 5594396 . + . ID=gene-PHA56_RS26410;Name=PHA56_RS26410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS26410;old_locus_tag=PHA56_26410 NZ_CP116214.1 Protein Homology CDS 5593449 5594396 . + 0 ID=cds-WP_014227523.1;Parent=gene-PHA56_RS26410;Dbxref=Genbank:WP_014227523.1;Name=WP_014227523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709812.2;locus_tag=PHA56_RS26410;product=sugar-binding transcriptional regulator;protein_id=WP_014227523.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5594467 5595270 . + . ID=gene-PHA56_RS26415;Name=PHA56_RS26415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS26415;old_locus_tag=PHA56_26415 NZ_CP116214.1 Protein Homology CDS 5594467 5595270 . + 0 ID=cds-WP_014227522.1;Parent=gene-PHA56_RS26415;Dbxref=Genbank:WP_014227522.1;Name=WP_014227522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224541.1;locus_tag=PHA56_RS26415;product=SDR family oxidoreductase;protein_id=WP_014227522.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5595280 5595687 . + . ID=gene-PHA56_RS26420;Name=PHA56_RS26420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS26420;old_locus_tag=PHA56_26420 NZ_CP116214.1 Protein Homology CDS 5595280 5595687 . + 0 ID=cds-WP_014227521.1;Parent=gene-PHA56_RS26420;Dbxref=Genbank:WP_014227521.1;Name=WP_014227521.1;Ontology_term=GO:0008643,GO:0016773;gbkey=CDS;go_function=phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224540.1;locus_tag=PHA56_RS26420;product=mannose/fructose/sorbose PTS transporter subunit IIA;protein_id=WP_014227521.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5595687 5596181 . + . ID=gene-PHA56_RS26425;Name=PHA56_RS26425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS26425;old_locus_tag=PHA56_26425 NZ_CP116214.1 Protein Homology CDS 5595687 5596181 . + 0 ID=cds-WP_014227520.1;Parent=gene-PHA56_RS26425;Dbxref=Genbank:WP_014227520.1;Name=WP_014227520.1;Ontology_term=GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004137596.1;locus_tag=PHA56_RS26425;product=mannose/fructose/sorbose PTS transporter subunit IIB;protein_id=WP_014227520.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5596368 5597165 . + . ID=gene-PHA56_RS26430;Name=PHA56_RS26430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS26430;old_locus_tag=PHA56_26430 NZ_CP116214.1 Protein Homology CDS 5596368 5597165 . + 0 ID=cds-WP_025107713.1;Parent=gene-PHA56_RS26430;Dbxref=Genbank:WP_025107713.1;Name=WP_025107713.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224538.1;locus_tag=PHA56_RS26430;product=PTS mannose/fructose/sorbose transporter subunit IIC;protein_id=WP_025107713.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5597177 5598001 . + . ID=gene-PHA56_RS26435;Name=PHA56_RS26435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS26435;old_locus_tag=PHA56_26435 NZ_CP116214.1 Protein Homology CDS 5597177 5598001 . + 0 ID=cds-WP_038423942.1;Parent=gene-PHA56_RS26435;Dbxref=Genbank:WP_038423942.1;Name=WP_038423942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224537.1;locus_tag=PHA56_RS26435;product=PTS system mannose/fructose/sorbose family transporter subunit IID;protein_id=WP_038423942.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5598099 5599331 . + . ID=gene-PHA56_RS26440;Name=sorE;gbkey=Gene;gene=sorE;gene_biotype=protein_coding;locus_tag=PHA56_RS26440;old_locus_tag=PHA56_26440 NZ_CP116214.1 Protein Homology CDS 5598099 5599331 . + 0 ID=cds-WP_038423941.1;Parent=gene-PHA56_RS26440;Dbxref=Genbank:WP_038423941.1;Name=WP_038423941.1;gbkey=CDS;gene=sorE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224536.1;locus_tag=PHA56_RS26440;product=L-sorbose 1-phosphate reductase;protein_id=WP_038423941.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5599324 5600133 . + . ID=gene-PHA56_RS26445;Name=PHA56_RS26445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS26445;old_locus_tag=PHA56_26445 NZ_CP116214.1 Protein Homology CDS 5599324 5600133 . + 0 ID=cds-WP_189087288.1;Parent=gene-PHA56_RS26445;Dbxref=Genbank:WP_189087288.1;Name=WP_189087288.1;Ontology_term=GO:0004764;gbkey=CDS;go_function=shikimate 3-dehydrogenase (NADP+) activity|0004764||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000610343.1;locus_tag=PHA56_RS26445;product=shikimate 5-dehydrogenase;protein_id=WP_189087288.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5600165 5600482 . - . ID=gene-PHA56_RS26450;Name=PHA56_RS26450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS26450;old_locus_tag=PHA56_26450 NZ_CP116214.1 Protein Homology CDS 5600165 5600482 . - 0 ID=cds-WP_014227516.1;Parent=gene-PHA56_RS26450;Dbxref=Genbank:WP_014227516.1;Name=WP_014227516.1;Ontology_term=GO:0006276,GO:0008657;gbkey=CDS;go_function=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) inhibitor activity|0008657||IEA;go_process=plasmid maintenance|0006276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004138474.1;locus_tag=PHA56_RS26450;product=CcdB family protein;protein_id=WP_014227516.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5600482 5600775 . - . ID=gene-PHA56_RS26455;Name=PHA56_RS26455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS26455;old_locus_tag=PHA56_26455 NZ_CP116214.1 Protein Homology CDS 5600482 5600775 . - 0 ID=cds-WP_004138471.1;Parent=gene-PHA56_RS26455;Dbxref=Genbank:WP_004138471.1;Name=WP_004138471.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004138471.1;locus_tag=PHA56_RS26455;product=type II toxin-antitoxin system CcdA family antitoxin;protein_id=WP_004138471.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5601012 5601701 . + . ID=gene-PHA56_RS26460;Name=pepE;gbkey=Gene;gene=pepE;gene_biotype=protein_coding;locus_tag=PHA56_RS26460;old_locus_tag=PHA56_26460 NZ_CP116214.1 Protein Homology CDS 5601012 5601701 . + 0 ID=cds-WP_014227515.1;Parent=gene-PHA56_RS26460;Dbxref=Genbank:WP_014227515.1;Name=WP_014227515.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;gene=pepE;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312966.1;locus_tag=PHA56_RS26460;product=dipeptidase PepE;protein_id=WP_014227515.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5602062 5603693 . - . ID=gene-PHA56_RS26465;Name=PHA56_RS26465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS26465;old_locus_tag=PHA56_26465 NZ_CP116214.1 Protein Homology CDS 5602062 5603693 . - 0 ID=cds-WP_014837116.1;Parent=gene-PHA56_RS26465;Dbxref=Genbank:WP_014837116.1;Name=WP_014837116.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224534.1;locus_tag=PHA56_RS26465;product=Na/Pi cotransporter family protein;protein_id=WP_014837116.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5603881 5607564 . - . ID=gene-PHA56_RS26470;Name=metH;gbkey=Gene;gene=metH;gene_biotype=protein_coding;locus_tag=PHA56_RS26470;old_locus_tag=PHA56_26470 NZ_CP116214.1 Protein Homology CDS 5603881 5607564 . - 0 ID=cds-WP_025107717.1;Parent=gene-PHA56_RS26470;Dbxref=Genbank:WP_025107717.1;Name=WP_025107717.1;Ontology_term=GO:0009086,GO:0008270,GO:0008705;gbkey=CDS;gene=metH;go_function=zinc ion binding|0008270||IEA,methionine synthase activity|0008705||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224533.1;locus_tag=PHA56_RS26470;product=methionine synthase;protein_id=WP_025107717.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5607761 5608588 . + . ID=gene-PHA56_RS26475;Name=iclR;gbkey=Gene;gene=iclR;gene_biotype=protein_coding;locus_tag=PHA56_RS26475;old_locus_tag=PHA56_26475 NZ_CP116214.1 Protein Homology CDS 5607761 5608588 . + 0 ID=cds-WP_004097706.1;Parent=gene-PHA56_RS26475;Dbxref=Genbank:WP_004097706.1;Name=WP_004097706.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=iclR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463052.1;locus_tag=PHA56_RS26475;product=glyoxylate bypass operon transcriptional repressor IclR;protein_id=WP_004097706.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5608598 5609002 . + . ID=gene-PHA56_RS26480;Name=PHA56_RS26480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS26480;old_locus_tag=PHA56_26480 NZ_CP116214.1 Protein Homology CDS 5608598 5609002 . + 0 ID=cds-WP_086074014.1;Parent=gene-PHA56_RS26480;Dbxref=Genbank:WP_086074014.1;Name=WP_086074014.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004127711.1;locus_tag=PHA56_RS26480;product=ASCH domain-containing protein;protein_id=WP_086074014.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5609016 5610758 . - . ID=gene-PHA56_RS26485;Name=aceK;gbkey=Gene;gene=aceK;gene_biotype=protein_coding;locus_tag=PHA56_RS26485;old_locus_tag=PHA56_26485 NZ_CP116214.1 Protein Homology CDS 5609016 5610758 . - 0 ID=cds-WP_014227511.1;Parent=gene-PHA56_RS26485;Dbxref=Genbank:WP_014227511.1;Name=WP_014227511.1;Ontology_term=GO:0006006,GO:0008772,GO:0016791;gbkey=CDS;gene=aceK;go_function=[isocitrate dehydrogenase (NADP+)] kinase activity|0008772||IEA,phosphatase activity|0016791||IEA;go_process=glucose metabolic process|0006006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004856382.1;locus_tag=PHA56_RS26485;product=bifunctional isocitrate dehydrogenase kinase/phosphatase;protein_id=WP_014227511.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5610812 5612116 . - . ID=gene-PHA56_RS26490;Name=aceA;gbkey=Gene;gene=aceA;gene_biotype=protein_coding;locus_tag=PHA56_RS26490;old_locus_tag=PHA56_26490 NZ_CP116214.1 Protein Homology CDS 5610812 5612116 . - 0 ID=cds-WP_004097699.1;Parent=gene-PHA56_RS26490;Dbxref=Genbank:WP_004097699.1;Name=WP_004097699.1;Ontology_term=GO:0019752,GO:0004451;gbkey=CDS;gene=aceA;go_function=isocitrate lyase activity|0004451||IEA;go_process=carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463049.1;locus_tag=PHA56_RS26490;product=isocitrate lyase;protein_id=WP_004097699.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5612148 5613749 . - . ID=gene-PHA56_RS26495;Name=aceB;gbkey=Gene;gene=aceB;gene_biotype=protein_coding;locus_tag=PHA56_RS26495;old_locus_tag=PHA56_26495 NZ_CP116214.1 Protein Homology CDS 5612148 5613749 . - 0 ID=cds-WP_038423938.1;Parent=gene-PHA56_RS26495;Dbxref=Genbank:WP_038423938.1;Name=WP_038423938.1;Ontology_term=GO:0006099,GO:0004474;gbkey=CDS;gene=aceB;go_function=malate synthase activity|0004474||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224529.1;locus_tag=PHA56_RS26495;product=malate synthase A;protein_id=WP_038423938.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5614009 5614938 . - . ID=gene-PHA56_RS26500;Name=metA;gbkey=Gene;gene=metA;gene_biotype=protein_coding;locus_tag=PHA56_RS26500;old_locus_tag=PHA56_26500 NZ_CP116214.1 Protein Homology CDS 5614009 5614938 . - 0 ID=cds-WP_014227509.1;Parent=gene-PHA56_RS26500;Dbxref=Genbank:WP_014227509.1;Name=WP_014227509.1;Ontology_term=GO:0009086,GO:0008899;gbkey=CDS;gene=metA;go_function=homoserine O-succinyltransferase activity|0008899||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132837.1;locus_tag=PHA56_RS26500;product=homoserine O-succinyltransferase;protein_id=WP_014227509.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5615095 5615532 . + . ID=gene-PHA56_RS26505;Name=PHA56_RS26505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS26505;old_locus_tag=PHA56_26505 NZ_CP116214.1 Protein Homology CDS 5615095 5615532 . + 0 ID=cds-WP_009651731.1;Parent=gene-PHA56_RS26505;Dbxref=Genbank:WP_009651731.1;Name=WP_009651731.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016808456.1;locus_tag=PHA56_RS26505;product=acetyltransferase;protein_id=WP_009651731.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5615631 5615746 . - . ID=gene-PHA56_RS26510;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=PHA56_RS26510;old_locus_tag=PHA56_26510 NZ_CP116214.1 cmsearch rRNA 5615631 5615746 . - . ID=rna-PHA56_RS26510;Parent=gene-PHA56_RS26510;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA56_RS26510;product=5S ribosomal RNA NZ_CP116214.1 cmsearch exon 5615631 5615746 . - . ID=exon-PHA56_RS26510-1;Parent=rna-PHA56_RS26510;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA56_RS26510;product=5S ribosomal RNA NZ_CP116214.1 RefSeq gene 5615947 5618852 . - . ID=gene-PHA56_RS26515;Name=PHA56_RS26515;gbkey=Gene;gene_biotype=rRNA;locus_tag=PHA56_RS26515;old_locus_tag=PHA56_26515 NZ_CP116214.1 cmsearch rRNA 5615947 5618852 . - . ID=rna-PHA56_RS26515;Parent=gene-PHA56_RS26515;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA56_RS26515;product=23S ribosomal RNA NZ_CP116214.1 cmsearch exon 5615947 5618852 . - . ID=exon-PHA56_RS26515-1;Parent=rna-PHA56_RS26515;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA56_RS26515;product=23S ribosomal RNA NZ_CP116214.1 RefSeq gene 5619043 5619117 . - . ID=gene-PHA56_RS26520;Name=PHA56_RS26520;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA56_RS26520;old_locus_tag=PHA56_26520 NZ_CP116214.1 tRNAscan-SE tRNA 5619043 5619117 . - . ID=rna-PHA56_RS26520;Parent=gene-PHA56_RS26520;anticodon=(pos:complement(5619082..5619084));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS26520;product=tRNA-Glu NZ_CP116214.1 tRNAscan-SE exon 5619043 5619117 . - . ID=exon-PHA56_RS26520-1;Parent=rna-PHA56_RS26520;anticodon=(pos:complement(5619082..5619084));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS26520;product=tRNA-Glu NZ_CP116214.1 RefSeq gene 5619205 5620744 . - . ID=gene-PHA56_RS26525;Name=PHA56_RS26525;gbkey=Gene;gene_biotype=rRNA;locus_tag=PHA56_RS26525;old_locus_tag=PHA56_26525 NZ_CP116214.1 cmsearch rRNA 5619205 5620744 . - . ID=rna-PHA56_RS26525;Parent=gene-PHA56_RS26525;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA56_RS26525;product=16S ribosomal RNA NZ_CP116214.1 cmsearch exon 5619205 5620744 . - . ID=exon-PHA56_RS26525-1;Parent=rna-PHA56_RS26525;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA56_RS26525;product=16S ribosomal RNA NZ_CP116214.1 RefSeq gene 5621371 5622960 . + . ID=gene-PHA56_RS26530;Name=purH;gbkey=Gene;gene=purH;gene_biotype=protein_coding;locus_tag=PHA56_RS26530;old_locus_tag=PHA56_26530 NZ_CP116214.1 Protein Homology CDS 5621371 5622960 . + 0 ID=cds-WP_014227508.1;Parent=gene-PHA56_RS26530;Dbxref=Genbank:WP_014227508.1;Name=WP_014227508.1;Ontology_term=GO:0009152,GO:0003937,GO:0004643;gbkey=CDS;gene=purH;go_function=IMP cyclohydrolase activity|0003937||IEA,phosphoribosylaminoimidazolecarboxamide formyltransferase activity|0004643||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132841.1;locus_tag=PHA56_RS26530;product=bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase;protein_id=WP_014227508.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5622976 5624268 . + . ID=gene-PHA56_RS26535;Name=purD;gbkey=Gene;gene=purD;gene_biotype=protein_coding;locus_tag=PHA56_RS26535;old_locus_tag=PHA56_26535 NZ_CP116214.1 Protein Homology CDS 5622976 5624268 . + 0 ID=cds-WP_014227507.1;Parent=gene-PHA56_RS26535;Dbxref=Genbank:WP_014227507.1;Name=WP_014227507.1;Ontology_term=GO:0006189,GO:0009152,GO:0004637;gbkey=CDS;gene=purD;go_function=phosphoribosylamine-glycine ligase activity|0004637||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014227507.1;locus_tag=PHA56_RS26535;product=phosphoribosylamine--glycine ligase;protein_id=WP_014227507.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5624265 5625599 . - . ID=gene-PHA56_RS26540;Name=zraR;gbkey=Gene;gene=zraR;gene_biotype=protein_coding;locus_tag=PHA56_RS26540;old_locus_tag=PHA56_26540 NZ_CP116214.1 Protein Homology CDS 5624265 5625599 . - 0 ID=cds-WP_032721071.1;Parent=gene-PHA56_RS26540;Dbxref=Genbank:WP_032721071.1;Name=WP_032721071.1;Ontology_term=GO:0000160,GO:0006355,GO:0043565;gbkey=CDS;gene=zraR;go_function=sequence-specific DNA binding|0043565||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463043.1;locus_tag=PHA56_RS26540;product=sigma-54-dependent response regulator transcription factor ZraR;protein_id=WP_032721071.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5625596 5626984 . - . ID=gene-PHA56_RS26545;Name=zraS;gbkey=Gene;gene=zraS;gene_biotype=protein_coding;locus_tag=PHA56_RS26545;old_locus_tag=PHA56_26545 NZ_CP116214.1 Protein Homology CDS 5625596 5626984 . - 0 ID=cds-WP_014227505.1;Parent=gene-PHA56_RS26545;Dbxref=Genbank:WP_014227505.1;Name=WP_014227505.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155;gbkey=CDS;gene=zraS;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004870525.1;locus_tag=PHA56_RS26545;product=two-component system sensor histidine kinase ZraS;protein_id=WP_014227505.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5627237 5627671 . + . ID=gene-PHA56_RS26550;Name=zraP;gbkey=Gene;gene=zraP;gene_biotype=protein_coding;locus_tag=PHA56_RS26550;old_locus_tag=PHA56_26550 NZ_CP116214.1 Protein Homology CDS 5627237 5627671 . + 0 ID=cds-WP_014227504.1;Parent=gene-PHA56_RS26550;Dbxref=Genbank:WP_014227504.1;Name=WP_014227504.1;gbkey=CDS;gene=zraP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002884346.1;locus_tag=PHA56_RS26550;product=zinc resistance sensor/chaperone ZraP;protein_id=WP_014227504.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5627675 5628367 . - . ID=gene-PHA56_RS26555;Name=PHA56_RS26555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS26555;old_locus_tag=PHA56_26555 NZ_CP116214.1 Protein Homology CDS 5627675 5628367 . - 0 ID=cds-WP_004097677.1;Parent=gene-PHA56_RS26555;Dbxref=Genbank:WP_004097677.1;Name=WP_004097677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224520.1;locus_tag=PHA56_RS26555;product=DUF1481 domain-containing protein;protein_id=WP_004097677.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5628380 5628652 . - . ID=gene-PHA56_RS26560;Name=hupA;gbkey=Gene;gene=hupA;gene_biotype=protein_coding;locus_tag=PHA56_RS26560;old_locus_tag=PHA56_26560 NZ_CP116214.1 Protein Homology CDS 5628380 5628652 . - 0 ID=cds-WP_004097675.1;Parent=gene-PHA56_RS26560;Dbxref=Genbank:WP_004097675.1;Name=WP_004097675.1;gbkey=CDS;gene=hupA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017460010.1;locus_tag=PHA56_RS26560;product=DNA-binding protein HU-alpha;protein_id=WP_004097675.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5628839 5629429 . - . ID=gene-PHA56_RS26565;Name=PHA56_RS26565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS26565;old_locus_tag=PHA56_26565 NZ_CP116214.1 Protein Homology CDS 5628839 5629429 . - 0 ID=cds-WP_014227503.1;Parent=gene-PHA56_RS26565;Dbxref=Genbank:WP_014227503.1;Name=WP_014227503.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463038.1;locus_tag=PHA56_RS26565;product=YjaG family protein;protein_id=WP_014227503.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5629472 5630143 . - . ID=gene-PHA56_RS26570;Name=nfi;gbkey=Gene;gene=nfi;gene_biotype=protein_coding;locus_tag=PHA56_RS26570;old_locus_tag=PHA56_26570 NZ_CP116214.1 Protein Homology CDS 5629472 5630143 . - 0 ID=cds-WP_014227502.1;Parent=gene-PHA56_RS26570;Dbxref=Genbank:WP_014227502.1;Name=WP_014227502.1;Note=cleaves DNA at apurinic or apyrimidinic sites;Ontology_term=GO:0006281,GO:0004519;gbkey=CDS;gene=nfi;go_function=endonuclease activity|0004519||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009652768.1;locus_tag=PHA56_RS26570;product=deoxyribonuclease V;protein_id=WP_014227502.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5630153 5631217 . - . ID=gene-PHA56_RS26575;Name=hemE;gbkey=Gene;gene=hemE;gene_biotype=protein_coding;locus_tag=PHA56_RS26575;old_locus_tag=PHA56_26575 NZ_CP116214.1 Protein Homology CDS 5630153 5631217 . - 0 ID=cds-WP_014227501.1;Parent=gene-PHA56_RS26575;Dbxref=Genbank:WP_014227501.1;Name=WP_014227501.1;Ontology_term=GO:0006779,GO:0004853;gbkey=CDS;gene=hemE;go_function=uroporphyrinogen decarboxylase activity|0004853||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418425.1;locus_tag=PHA56_RS26575;product=uroporphyrinogen decarboxylase;protein_id=WP_014227501.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5631384 5632157 . - . ID=gene-PHA56_RS26580;Name=nudC;gbkey=Gene;gene=nudC;gene_biotype=protein_coding;locus_tag=PHA56_RS26580;old_locus_tag=PHA56_26580 NZ_CP116214.1 Protein Homology CDS 5631384 5632157 . - 0 ID=cds-WP_004097667.1;Parent=gene-PHA56_RS26580;Dbxref=Genbank:WP_004097667.1;Name=WP_004097667.1;Ontology_term=GO:0000210,GO:0016787;gbkey=CDS;gene=nudC;go_function=NAD+ diphosphatase activity|0000210||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463035.1;locus_tag=PHA56_RS26580;product=NAD(+) diphosphatase;protein_id=WP_004097667.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5632253 5632750 . + . ID=gene-PHA56_RS26585;Name=PHA56_RS26585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS26585;old_locus_tag=PHA56_26585 NZ_CP116214.1 Protein Homology CDS 5632253 5632750 . + 0 ID=cds-WP_014837106.1;Parent=gene-PHA56_RS26585;Dbxref=Genbank:WP_014837106.1;Name=WP_014837106.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224514.1;locus_tag=PHA56_RS26585;product=Rsd/AlgQ family anti-sigma factor;protein_id=WP_014837106.1;transl_table=11 NZ_CP116214.1 cmsearch riboswitch 5632805 5632918 . + . ID=id-NZ_CP116214.1:5632805..5632918;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NZ_CP116214.1 RefSeq gene 5633004 5634899 . + . ID=gene-PHA56_RS26590;Name=thiC;gbkey=Gene;gene=thiC;gene_biotype=protein_coding;locus_tag=PHA56_RS26590;old_locus_tag=PHA56_26590 NZ_CP116214.1 Protein Homology CDS 5633004 5634899 . + 0 ID=cds-WP_032721073.1;Parent=gene-PHA56_RS26590;Dbxref=Genbank:WP_032721073.1;Name=WP_032721073.1;Ontology_term=GO:0009228,GO:0051536;gbkey=CDS;gene=thiC;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463033.1;locus_tag=PHA56_RS26590;product=phosphomethylpyrimidine synthase ThiC;protein_id=WP_032721073.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5634899 5635534 . + . ID=gene-PHA56_RS26595;Name=thiE;gbkey=Gene;gene=thiE;gene_biotype=protein_coding;locus_tag=PHA56_RS26595;old_locus_tag=PHA56_26595 NZ_CP116214.1 Protein Homology CDS 5634899 5635534 . + 0 ID=cds-WP_009652773.1;Parent=gene-PHA56_RS26595;Dbxref=Genbank:WP_009652773.1;Name=WP_009652773.1;Ontology_term=GO:0009228,GO:0004789;gbkey=CDS;gene=thiE;go_function=thiamine-phosphate diphosphorylase activity|0004789||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224512.1;locus_tag=PHA56_RS26595;product=thiamine phosphate synthase;protein_id=WP_009652773.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5635527 5636282 . + . ID=gene-PHA56_RS26600;Name=thiF;gbkey=Gene;gene=thiF;gene_biotype=protein_coding;locus_tag=PHA56_RS26600;old_locus_tag=PHA56_26600 NZ_CP116214.1 Protein Homology CDS 5635527 5636282 . + 0 ID=cds-WP_032721075.1;Parent=gene-PHA56_RS26600;Dbxref=Genbank:WP_032721075.1;Name=WP_032721075.1;Ontology_term=GO:0009228,GO:0016779;gbkey=CDS;gene=thiF;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224511.1;locus_tag=PHA56_RS26600;product=thiazole biosynthesis adenylyltransferase ThiF;protein_id=WP_032721075.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5636266 5636466 . + . ID=gene-PHA56_RS26605;Name=thiS;gbkey=Gene;gene=thiS;gene_biotype=protein_coding;locus_tag=PHA56_RS26605;old_locus_tag=PHA56_26605 NZ_CP116214.1 Protein Homology CDS 5636266 5636466 . + 0 ID=cds-WP_014227496.1;Parent=gene-PHA56_RS26605;Dbxref=Genbank:WP_014227496.1;Name=WP_014227496.1;Ontology_term=GO:0009228,GO:0003824;gbkey=CDS;gene=thiS;go_function=catalytic activity|0003824||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224510.1;locus_tag=PHA56_RS26605;product=sulfur carrier protein ThiS;protein_id=WP_014227496.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5636468 5637238 . + . ID=gene-PHA56_RS26610;Name=thiG;gbkey=Gene;gene=thiG;gene_biotype=protein_coding;locus_tag=PHA56_RS26610;old_locus_tag=PHA56_26610 NZ_CP116214.1 Protein Homology CDS 5636468 5637238 . + 0 ID=cds-WP_014227495.1;Parent=gene-PHA56_RS26610;Dbxref=Genbank:WP_014227495.1;Name=WP_014227495.1;gbkey=CDS;gene=thiG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004870501.1;locus_tag=PHA56_RS26610;product=thiazole synthase;protein_id=WP_014227495.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5637235 5638368 . + . ID=gene-PHA56_RS26615;Name=thiH;gbkey=Gene;gene=thiH;gene_biotype=protein_coding;locus_tag=PHA56_RS26615;old_locus_tag=PHA56_26615 NZ_CP116214.1 Protein Homology CDS 5637235 5638368 . + 0 ID=cds-WP_014227494.1;Parent=gene-PHA56_RS26615;Dbxref=Genbank:WP_014227494.1;Name=WP_014227494.1;Ontology_term=GO:0009228,GO:0016829,GO:1904047;gbkey=CDS;gene=thiH;go_function=lyase activity|0016829||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224508.1;locus_tag=PHA56_RS26615;product=2-iminoacetate synthase ThiH;protein_id=WP_014227494.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5638689 5640221 . + . ID=gene-PHA56_RS26620;Name=PHA56_RS26620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS26620;old_locus_tag=PHA56_26620 NZ_CP116214.1 Protein Homology CDS 5638689 5640221 . + 0 ID=cds-WP_014227493.1;Parent=gene-PHA56_RS26620;Dbxref=Genbank:WP_014227493.1;Name=WP_014227493.1;Ontology_term=GO:0009966,GO:0009975;gbkey=CDS;go_function=cyclase activity|0009975||IEA;go_process=regulation of signal transduction|0009966||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224506.1;locus_tag=PHA56_RS26620;product=sensor domain-containing diguanylate cyclase;protein_id=WP_014227493.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5640439 5640699 . + . ID=gene-PHA56_RS26625;Name=PHA56_RS26625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS26625;old_locus_tag=PHA56_26625 NZ_CP116214.1 Protein Homology CDS 5640439 5640699 . + 0 ID=cds-WP_009652762.1;Parent=gene-PHA56_RS26625;Dbxref=Genbank:WP_009652762.1;Name=WP_009652762.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224505.1;locus_tag=PHA56_RS26625;product=PTS sugar transporter subunit IIB;protein_id=WP_009652762.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5640703 5641020 . + . ID=gene-PHA56_RS26630;Name=PHA56_RS26630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS26630;old_locus_tag=PHA56_26630 NZ_CP116214.1 Protein Homology CDS 5640703 5641020 . + 0 ID=cds-WP_004097651.1;Parent=gene-PHA56_RS26630;Dbxref=Genbank:WP_004097651.1;Name=WP_004097651.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224504.1;locus_tag=PHA56_RS26630;product=PTS lactose/cellobiose transporter subunit IIA;protein_id=WP_004097651.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5641064 5642404 . - . ID=gene-PHA56_RS26635;Name=dcuB;gbkey=Gene;gene=dcuB;gene_biotype=protein_coding;locus_tag=PHA56_RS26635;old_locus_tag=PHA56_26635 NZ_CP116214.1 Protein Homology CDS 5641064 5642404 . - 0 ID=cds-WP_004097650.1;Parent=gene-PHA56_RS26635;Dbxref=Genbank:WP_004097650.1;Name=WP_004097650.1;gbkey=CDS;gene=dcuB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224503.1;locus_tag=PHA56_RS26635;product=anaerobic C4-dicarboxylate transporter DcuB;protein_id=WP_004097650.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5642801 5647024 . - . ID=gene-PHA56_RS26640;Name=rpoC;gbkey=Gene;gene=rpoC;gene_biotype=protein_coding;locus_tag=PHA56_RS26640;old_locus_tag=PHA56_26640 NZ_CP116214.1 Protein Homology CDS 5642801 5647024 . - 0 ID=cds-WP_014227492.1;Parent=gene-PHA56_RS26640;Dbxref=Genbank:WP_014227492.1;Name=WP_014227492.1;Ontology_term=GO:0006351,GO:0003899,GO:0000345;gbkey=CDS;gene=rpoC;go_component=cytosolic DNA-directed RNA polymerase complex|0000345||IEA;go_function=DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224502.1;locus_tag=PHA56_RS26640;product=DNA-directed RNA polymerase subunit beta';protein_id=WP_014227492.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5647101 5651129 . - . ID=gene-PHA56_RS26645;Name=rpoB;gbkey=Gene;gene=rpoB;gene_biotype=protein_coding;locus_tag=PHA56_RS26645;old_locus_tag=PHA56_26645 NZ_CP116214.1 Protein Homology CDS 5647101 5651129 . - 0 ID=cds-WP_004097647.1;Parent=gene-PHA56_RS26645;Dbxref=Genbank:WP_004097647.1;Name=WP_004097647.1;Ontology_term=GO:0006351,GO:0003899,GO:0000345;gbkey=CDS;gene=rpoB;go_component=cytosolic DNA-directed RNA polymerase complex|0000345||IEA;go_function=DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004870488.1;locus_tag=PHA56_RS26645;product=DNA-directed RNA polymerase subunit beta;protein_id=WP_004097647.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5651455 5651820 . - . ID=gene-PHA56_RS26650;Name=rplL;gbkey=Gene;gene=rplL;gene_biotype=protein_coding;locus_tag=PHA56_RS26650;old_locus_tag=PHA56_26650 NZ_CP116214.1 Protein Homology CDS 5651455 5651820 . - 0 ID=cds-WP_004097645.1;Parent=gene-PHA56_RS26650;Dbxref=Genbank:WP_004097645.1;Name=WP_004097645.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplL;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122872.1;locus_tag=PHA56_RS26650;product=50S ribosomal protein L7/L12;protein_id=WP_004097645.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5651887 5652384 . - . ID=gene-PHA56_RS26655;Name=rplJ;gbkey=Gene;gene=rplJ;gene_biotype=protein_coding;locus_tag=PHA56_RS26655;old_locus_tag=PHA56_26655 NZ_CP116214.1 Protein Homology CDS 5651887 5652384 . - 0 ID=cds-WP_004097644.1;Parent=gene-PHA56_RS26655;Dbxref=Genbank:WP_004097644.1;Name=WP_004097644.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplJ;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002438625.1;locus_tag=PHA56_RS26655;product=50S ribosomal protein L10;protein_id=WP_004097644.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5652804 5653508 . - . ID=gene-PHA56_RS26660;Name=rplA;gbkey=Gene;gene=rplA;gene_biotype=protein_coding;locus_tag=PHA56_RS26660;old_locus_tag=PHA56_26660 NZ_CP116214.1 Protein Homology CDS 5652804 5653508 . - 0 ID=cds-WP_004097642.1;Parent=gene-PHA56_RS26660;Dbxref=Genbank:WP_004097642.1;Name=WP_004097642.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplA;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312934.1;locus_tag=PHA56_RS26660;product=50S ribosomal protein L1;protein_id=WP_004097642.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5653512 5653940 . - . ID=gene-PHA56_RS26665;Name=rplK;gbkey=Gene;gene=rplK;gene_biotype=protein_coding;locus_tag=PHA56_RS26665;old_locus_tag=PHA56_26665 NZ_CP116214.1 Protein Homology CDS 5653512 5653940 . - 0 ID=cds-WP_004097640.1;Parent=gene-PHA56_RS26665;Dbxref=Genbank:WP_004097640.1;Name=WP_004097640.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplK;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006121495.1;locus_tag=PHA56_RS26665;product=50S ribosomal protein L11;protein_id=WP_004097640.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5654094 5654639 . - . ID=gene-PHA56_RS26670;Name=nusG;gbkey=Gene;gene=nusG;gene_biotype=protein_coding;locus_tag=PHA56_RS26670;old_locus_tag=PHA56_26670 NZ_CP116214.1 Protein Homology CDS 5654094 5654639 . - 0 ID=cds-WP_002438628.1;Parent=gene-PHA56_RS26670;Dbxref=Genbank:WP_002438628.1;Name=WP_002438628.1;Ontology_term=GO:0006353;gbkey=CDS;gene=nusG;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005280494.1;locus_tag=PHA56_RS26670;product=transcription termination/antitermination protein NusG;protein_id=WP_002438628.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5654641 5655024 . - . ID=gene-PHA56_RS26675;Name=secE;gbkey=Gene;gene=secE;gene_biotype=protein_coding;locus_tag=PHA56_RS26675;old_locus_tag=PHA56_26675 NZ_CP116214.1 Protein Homology CDS 5654641 5655024 . - 0 ID=cds-WP_004097638.1;Parent=gene-PHA56_RS26675;Dbxref=Genbank:WP_004097638.1;Name=WP_004097638.1;gbkey=CDS;gene=secE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007665874.1;locus_tag=PHA56_RS26675;product=preprotein translocase subunit SecE;protein_id=WP_004097638.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5655257 5656441 . - . ID=gene-PHA56_RS26680;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=PHA56_RS26680;old_locus_tag=PHA56_26680 NZ_CP116214.1 Protein Homology CDS 5655257 5656441 . - 0 ID=cds-WP_004097636.1-2;Parent=gene-PHA56_RS26680;Dbxref=Genbank:WP_004097636.1;Name=WP_004097636.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tuf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462349.1;locus_tag=PHA56_RS26680;product=elongation factor Tu;protein_id=WP_004097636.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5656558 5656633 . - . ID=gene-PHA56_RS26685;Name=PHA56_RS26685;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA56_RS26685;old_locus_tag=PHA56_26685 NZ_CP116214.1 tRNAscan-SE tRNA 5656558 5656633 . - . ID=rna-PHA56_RS26685;Parent=gene-PHA56_RS26685;anticodon=(pos:complement(5656598..5656600));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS26685;product=tRNA-Thr NZ_CP116214.1 tRNAscan-SE exon 5656558 5656633 . - . ID=exon-PHA56_RS26685-1;Parent=rna-PHA56_RS26685;anticodon=(pos:complement(5656598..5656600));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS26685;product=tRNA-Thr NZ_CP116214.1 RefSeq gene 5656639 5656713 . - . ID=gene-PHA56_RS26690;Name=PHA56_RS26690;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA56_RS26690;old_locus_tag=PHA56_26690 NZ_CP116214.1 tRNAscan-SE tRNA 5656639 5656713 . - . ID=rna-PHA56_RS26690;Parent=gene-PHA56_RS26690;anticodon=(pos:complement(5656678..5656680));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS26690;product=tRNA-Gly NZ_CP116214.1 tRNAscan-SE exon 5656639 5656713 . - . ID=exon-PHA56_RS26690-1;Parent=rna-PHA56_RS26690;anticodon=(pos:complement(5656678..5656680));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS26690;product=tRNA-Gly NZ_CP116214.1 RefSeq gene 5656833 5656917 . - . ID=gene-PHA56_RS26695;Name=PHA56_RS26695;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA56_RS26695;old_locus_tag=PHA56_26695 NZ_CP116214.1 tRNAscan-SE tRNA 5656833 5656917 . - . ID=rna-PHA56_RS26695;Parent=gene-PHA56_RS26695;anticodon=(pos:complement(5656881..5656883));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS26695;product=tRNA-Tyr NZ_CP116214.1 tRNAscan-SE exon 5656833 5656917 . - . ID=exon-PHA56_RS26695-1;Parent=rna-PHA56_RS26695;anticodon=(pos:complement(5656881..5656883));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS26695;product=tRNA-Tyr NZ_CP116214.1 RefSeq gene 5656928 5657003 . - . ID=gene-PHA56_RS26700;Name=PHA56_RS26700;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA56_RS26700;old_locus_tag=PHA56_26700 NZ_CP116214.1 tRNAscan-SE tRNA 5656928 5657003 . - . ID=rna-PHA56_RS26700;Parent=gene-PHA56_RS26700;anticodon=(pos:complement(5656968..5656970));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS26700;product=tRNA-Thr NZ_CP116214.1 tRNAscan-SE exon 5656928 5657003 . - . ID=exon-PHA56_RS26700-1;Parent=rna-PHA56_RS26700;anticodon=(pos:complement(5656968..5656970));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS26700;product=tRNA-Thr NZ_CP116214.1 RefSeq gene 5657443 5658393 . + . ID=gene-PHA56_RS26705;Name=coaA;gbkey=Gene;gene=coaA;gene_biotype=protein_coding;locus_tag=PHA56_RS26705;old_locus_tag=PHA56_26705 NZ_CP116214.1 Protein Homology CDS 5657443 5658393 . + 0 ID=cds-WP_014227490.1;Parent=gene-PHA56_RS26705;Dbxref=Genbank:WP_014227490.1;Name=WP_014227490.1;Ontology_term=GO:0015937,GO:0004594;gbkey=CDS;gene=coaA;go_function=pantothenate kinase activity|0004594||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463013.1;locus_tag=PHA56_RS26705;product=type I pantothenate kinase;protein_id=WP_014227490.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5658420 5659382 . - . ID=gene-PHA56_RS26710;Name=birA;gbkey=Gene;gene=birA;gene_biotype=protein_coding;locus_tag=PHA56_RS26710;old_locus_tag=PHA56_26710 NZ_CP116214.1 Protein Homology CDS 5658420 5659382 . - 0 ID=cds-WP_014837096.1;Parent=gene-PHA56_RS26710;Dbxref=Genbank:WP_014837096.1;Name=WP_014837096.1;Ontology_term=GO:0036211,GO:0004077;gbkey=CDS;gene=birA;go_function=biotin-[acetyl-CoA-carboxylase] ligase activity|0004077||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224492.1;locus_tag=PHA56_RS26710;product=bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA;protein_id=WP_014837096.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5659379 5660407 . - . ID=gene-PHA56_RS26715;Name=murB;gbkey=Gene;gene=murB;gene_biotype=protein_coding;locus_tag=PHA56_RS26715;old_locus_tag=PHA56_26715 NZ_CP116214.1 Protein Homology CDS 5659379 5660407 . - 0 ID=cds-WP_032695049.1;Parent=gene-PHA56_RS26715;Dbxref=Genbank:WP_032695049.1;Name=WP_032695049.1;Ontology_term=GO:0008762,GO:0071949;gbkey=CDS;gene=murB;go_function=UDP-N-acetylmuramate dehydrogenase activity|0008762||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224491.1;locus_tag=PHA56_RS26715;product=UDP-N-acetylmuramate dehydrogenase;protein_id=WP_032695049.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5660575 5660691 . - . ID=gene-PHA56_RS26720;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=PHA56_RS26720;old_locus_tag=PHA56_26720 NZ_CP116214.1 cmsearch rRNA 5660575 5660691 . - . ID=rna-PHA56_RS26720;Parent=gene-PHA56_RS26720;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA56_RS26720;product=5S ribosomal RNA NZ_CP116214.1 cmsearch exon 5660575 5660691 . - . ID=exon-PHA56_RS26720-1;Parent=rna-PHA56_RS26720;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA56_RS26720;product=5S ribosomal RNA NZ_CP116214.1 RefSeq gene 5660893 5663798 . - . ID=gene-PHA56_RS26725;Name=PHA56_RS26725;gbkey=Gene;gene_biotype=rRNA;locus_tag=PHA56_RS26725;old_locus_tag=PHA56_26725 NZ_CP116214.1 cmsearch rRNA 5660893 5663798 . - . ID=rna-PHA56_RS26725;Parent=gene-PHA56_RS26725;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA56_RS26725;product=23S ribosomal RNA NZ_CP116214.1 cmsearch exon 5660893 5663798 . - . ID=exon-PHA56_RS26725-1;Parent=rna-PHA56_RS26725;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA56_RS26725;product=23S ribosomal RNA NZ_CP116214.1 RefSeq gene 5663977 5664052 . - . ID=gene-PHA56_RS26730;Name=PHA56_RS26730;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA56_RS26730;old_locus_tag=PHA56_26730 NZ_CP116214.1 tRNAscan-SE tRNA 5663977 5664052 . - . ID=rna-PHA56_RS26730;Parent=gene-PHA56_RS26730;anticodon=(pos:complement(5664017..5664019));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS26730;product=tRNA-Ala NZ_CP116214.1 tRNAscan-SE exon 5663977 5664052 . - . ID=exon-PHA56_RS26730-1;Parent=rna-PHA56_RS26730;anticodon=(pos:complement(5664017..5664019));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS26730;product=tRNA-Ala NZ_CP116214.1 RefSeq gene 5664160 5664236 . - . ID=gene-PHA56_RS26735;Name=PHA56_RS26735;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA56_RS26735;old_locus_tag=PHA56_26735 NZ_CP116214.1 tRNAscan-SE tRNA 5664160 5664236 . - . ID=rna-PHA56_RS26735;Parent=gene-PHA56_RS26735;anticodon=(pos:complement(5664200..5664202));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS26735;product=tRNA-Ile NZ_CP116214.1 tRNAscan-SE exon 5664160 5664236 . - . ID=exon-PHA56_RS26735-1;Parent=rna-PHA56_RS26735;anticodon=(pos:complement(5664200..5664202));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS26735;product=tRNA-Ile NZ_CP116214.1 RefSeq gene 5664308 5665847 . - . ID=gene-PHA56_RS26740;Name=PHA56_RS26740;gbkey=Gene;gene_biotype=rRNA;locus_tag=PHA56_RS26740;old_locus_tag=PHA56_26740 NZ_CP116214.1 cmsearch rRNA 5664308 5665847 . - . ID=rna-PHA56_RS26740;Parent=gene-PHA56_RS26740;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA56_RS26740;product=16S ribosomal RNA NZ_CP116214.1 cmsearch exon 5664308 5665847 . - . ID=exon-PHA56_RS26740-1;Parent=rna-PHA56_RS26740;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA56_RS26740;product=16S ribosomal RNA NZ_CP116214.1 RefSeq gene 5666239 5666772 . - . ID=gene-PHA56_RS26745;Name=hemG;gbkey=Gene;gene=hemG;gene_biotype=protein_coding;locus_tag=PHA56_RS26745;old_locus_tag=PHA56_26745 NZ_CP116214.1 Protein Homology CDS 5666239 5666772 . - 0 ID=cds-WP_014227488.1;Parent=gene-PHA56_RS26745;Dbxref=Genbank:WP_014227488.1;Name=WP_014227488.1;gbkey=CDS;gene=hemG;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224490.1;locus_tag=PHA56_RS26745;product=menaquinone-dependent protoporphyrinogen IX dehydrogenase;protein_id=WP_014227488.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5666784 5668235 . - . ID=gene-PHA56_RS26750;Name=trkH;gbkey=Gene;gene=trkH;gene_biotype=protein_coding;locus_tag=PHA56_RS26750;old_locus_tag=PHA56_26750 NZ_CP116214.1 Protein Homology CDS 5666784 5668235 . - 0 ID=cds-WP_004097624.1;Parent=gene-PHA56_RS26750;Dbxref=Genbank:WP_004097624.1;Name=WP_004097624.1;gbkey=CDS;gene=trkH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004146450.1;locus_tag=PHA56_RS26750;product=Trk system potassium transporter TrkH;protein_id=WP_004097624.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5668277 5668891 . - . ID=gene-PHA56_RS26755;Name=PHA56_RS26755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS26755;old_locus_tag=PHA56_26755 NZ_CP116214.1 Protein Homology CDS 5668277 5668891 . - 0 ID=cds-WP_014227487.1;Parent=gene-PHA56_RS26755;Dbxref=Genbank:WP_014227487.1;Name=WP_014227487.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224488.1;locus_tag=PHA56_RS26755;product=IMPACT family protein;protein_id=WP_014227487.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5668891 5670222 . - . ID=gene-PHA56_RS26760;Name=pepQ;gbkey=Gene;gene=pepQ;gene_biotype=protein_coding;locus_tag=PHA56_RS26760;old_locus_tag=PHA56_26760 NZ_CP116214.1 Protein Homology CDS 5668891 5670222 . - 0 ID=cds-WP_009652560.1;Parent=gene-PHA56_RS26760;Dbxref=Genbank:WP_009652560.1;Name=WP_009652560.1;gbkey=CDS;gene=pepQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020801804.1;locus_tag=PHA56_RS26760;product=Xaa-Pro dipeptidase;protein_id=WP_009652560.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5670414 5672603 . + . ID=gene-PHA56_RS26765;Name=fadB;gbkey=Gene;gene=fadB;gene_biotype=protein_coding;locus_tag=PHA56_RS26765;old_locus_tag=PHA56_26765 NZ_CP116214.1 Protein Homology CDS 5670414 5672603 . + 0 ID=cds-WP_014227486.1;Parent=gene-PHA56_RS26765;Dbxref=Genbank:WP_014227486.1;Name=WP_014227486.1;Ontology_term=GO:0009062,GO:0003857,GO:0004165,GO:0004300,GO:0008692;gbkey=CDS;gene=fadB;go_function=3-hydroxyacyl-CoA dehydrogenase activity|0003857||IEA,delta(3)-delta(2)-enoyl-CoA isomerase activity|0004165||IEA,enoyl-CoA hydratase activity|0004300||IEA,3-hydroxybutyryl-CoA epimerase activity|0008692||IEA;go_process=fatty acid catabolic process|0009062||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312801.1;locus_tag=PHA56_RS26765;product=fatty acid oxidation complex subunit alpha FadB;protein_id=WP_014227486.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5672613 5673776 . + . ID=gene-PHA56_RS26770;Name=fadA;gbkey=Gene;gene=fadA;gene_biotype=protein_coding;locus_tag=PHA56_RS26770;old_locus_tag=PHA56_26770 NZ_CP116214.1 Protein Homology CDS 5672613 5673776 . + 0 ID=cds-WP_004097616.1;Parent=gene-PHA56_RS26770;Dbxref=Genbank:WP_004097616.1;Name=WP_004097616.1;Ontology_term=GO:0009062,GO:0003988;gbkey=CDS;gene=fadA;go_function=acetyl-CoA C-acyltransferase activity|0003988||IEA;go_process=fatty acid catabolic process|0009062||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224485.1;locus_tag=PHA56_RS26770;product=acetyl-CoA C-acyltransferase FadA;protein_id=WP_004097616.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5674018 5674329 . + . ID=gene-PHA56_RS26775;Name=PHA56_RS26775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS26775;old_locus_tag=PHA56_26775 NZ_CP116214.1 Protein Homology CDS 5674018 5674329 . + 0 ID=cds-WP_014227485.1;Parent=gene-PHA56_RS26775;Dbxref=Genbank:WP_014227485.1;Name=WP_014227485.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004107793.1;locus_tag=PHA56_RS26775;product=hypothetical protein;protein_id=WP_014227485.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5674374 5675075 . - . ID=gene-PHA56_RS26780;Name=fre;gbkey=Gene;gene=fre;gene_biotype=protein_coding;locus_tag=PHA56_RS26780;old_locus_tag=PHA56_26780 NZ_CP116214.1 Protein Homology CDS 5674374 5675075 . - 0 ID=cds-WP_014227484.1;Parent=gene-PHA56_RS26780;Dbxref=Genbank:WP_014227484.1;Name=WP_014227484.1;Ontology_term=GO:0016491;gbkey=CDS;gene=fre;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224484.1;locus_tag=PHA56_RS26780;product=NAD(P)H-flavin reductase;protein_id=WP_014227484.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5675130 5676599 . - . ID=gene-PHA56_RS26785;Name=ubiD;gbkey=Gene;gene=ubiD;gene_biotype=protein_coding;locus_tag=PHA56_RS26785;old_locus_tag=PHA56_26785 NZ_CP116214.1 Protein Homology CDS 5675130 5676599 . - 0 ID=cds-WP_014227483.1;Parent=gene-PHA56_RS26785;Dbxref=Genbank:WP_014227483.1;Name=WP_014227483.1;Ontology_term=GO:0016831;gbkey=CDS;gene=ubiD;go_function=carboxy-lyase activity|0016831||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004870461.1;locus_tag=PHA56_RS26785;product=4-hydroxy-3-polyprenylbenzoate decarboxylase;protein_id=WP_014227483.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5676777 5677265 . + . ID=gene-PHA56_RS26790;Name=rfaH;gbkey=Gene;gene=rfaH;gene_biotype=protein_coding;locus_tag=PHA56_RS26790;old_locus_tag=PHA56_26790 NZ_CP116214.1 Protein Homology CDS 5676777 5677265 . + 0 ID=cds-WP_004097595.1;Parent=gene-PHA56_RS26790;Dbxref=Genbank:WP_004097595.1;Name=WP_004097595.1;Ontology_term=GO:0006355;gbkey=CDS;gene=rfaH;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224481.1;locus_tag=PHA56_RS26790;product=transcription/translation regulatory transformer protein RfaH;protein_id=WP_004097595.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5677272 5678066 . - . ID=gene-PHA56_RS26795;Name=tatD;gbkey=Gene;gene=tatD;gene_biotype=protein_coding;locus_tag=PHA56_RS26795;old_locus_tag=PHA56_26795 NZ_CP116214.1 Protein Homology CDS 5677272 5678066 . - 0 ID=cds-WP_014837091.1;Parent=gene-PHA56_RS26795;Dbxref=Genbank:WP_014837091.1;Name=WP_014837091.1;Ontology_term=GO:0008408;gbkey=CDS;gene=tatD;go_function=3'-5' exonuclease activity|0008408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009651721.1;locus_tag=PHA56_RS26795;product=3'-5' ssDNA/RNA exonuclease TatD;protein_id=WP_014837091.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5678097 5678870 . - . ID=gene-PHA56_RS26800;Name=tatC;gbkey=Gene;gene=tatC;gene_biotype=protein_coding;locus_tag=PHA56_RS26800;old_locus_tag=PHA56_26800 NZ_CP116214.1 Protein Homology CDS 5678097 5678870 . - 0 ID=cds-WP_004097593.1;Parent=gene-PHA56_RS26800;Dbxref=Genbank:WP_004097593.1;Name=WP_004097593.1;gbkey=CDS;gene=tatC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224479.1;locus_tag=PHA56_RS26800;product=Sec-independent protein translocase subunit TatC;protein_id=WP_004097593.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5678873 5679412 . - . ID=gene-PHA56_RS26805;Name=tatB;gbkey=Gene;gene=tatB;gene_biotype=protein_coding;locus_tag=PHA56_RS26805;old_locus_tag=PHA56_26805 NZ_CP116214.1 Protein Homology CDS 5678873 5679412 . - 0 ID=cds-WP_014227481.1;Parent=gene-PHA56_RS26805;Dbxref=Genbank:WP_014227481.1;Name=WP_014227481.1;Ontology_term=GO:0015031,GO:0015628;gbkey=CDS;gene=tatB;go_process=protein transport|0015031||IEA,protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004107785.1;locus_tag=PHA56_RS26805;product=Sec-independent protein translocase protein TatB;protein_id=WP_014227481.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5679416 5679667 . - . ID=gene-PHA56_RS26810;Name=tatA;gbkey=Gene;gene=tatA;gene_biotype=protein_coding;locus_tag=PHA56_RS26810;old_locus_tag=PHA56_26810 NZ_CP116214.1 Protein Homology CDS 5679416 5679667 . - 0 ID=cds-WP_014227480.1;Parent=gene-PHA56_RS26810;Dbxref=Genbank:WP_014227480.1;Name=WP_014227480.1;gbkey=CDS;gene=tatA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224477.1;locus_tag=PHA56_RS26810;product=Sec-independent protein translocase subunit TatA;protein_id=WP_014227480.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5679745 5681385 . - . ID=gene-PHA56_RS26815;Name=ubiB;gbkey=Gene;gene=ubiB;gene_biotype=protein_coding;locus_tag=PHA56_RS26815;old_locus_tag=PHA56_26815 NZ_CP116214.1 Protein Homology CDS 5679745 5681385 . - 0 ID=cds-WP_009651715.1;Parent=gene-PHA56_RS26815;Dbxref=Genbank:WP_009651715.1;Name=WP_009651715.1;Ontology_term=GO:0006744;gbkey=CDS;gene=ubiB;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224476.1;locus_tag=PHA56_RS26815;product=ubiquinone biosynthesis regulatory protein kinase UbiB;protein_id=WP_009651715.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5681382 5681987 . - . ID=gene-PHA56_RS26820;Name=PHA56_RS26820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS26820;old_locus_tag=PHA56_26820 NZ_CP116214.1 Protein Homology CDS 5681382 5681987 . - 0 ID=cds-WP_014227479.1;Parent=gene-PHA56_RS26820;Dbxref=Genbank:WP_014227479.1;Name=WP_014227479.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224475.1;locus_tag=PHA56_RS26820;product=SCP2 domain-containing protein;protein_id=WP_014227479.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5682001 5682756 . - . ID=gene-PHA56_RS26825;Name=ubiE;gbkey=Gene;gene=ubiE;gene_biotype=protein_coding;locus_tag=PHA56_RS26825;old_locus_tag=PHA56_26825 NZ_CP116214.1 Protein Homology CDS 5682001 5682756 . - 0 ID=cds-WP_004097585.1;Parent=gene-PHA56_RS26825;Dbxref=Genbank:WP_004097585.1;Name=WP_004097585.1;Ontology_term=GO:0008168;gbkey=CDS;gene=ubiE;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224474.1;locus_tag=PHA56_RS26825;product=bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1%2C4-benzoquinol methylase UbiE;protein_id=WP_004097585.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5682827 5684275 . - . ID=gene-PHA56_RS26830;Name=rmuC;gbkey=Gene;gene=rmuC;gene_biotype=protein_coding;locus_tag=PHA56_RS26830;old_locus_tag=PHA56_26830 NZ_CP116214.1 Protein Homology CDS 5682827 5684275 . - 0 ID=cds-WP_038423936.1;Parent=gene-PHA56_RS26830;Dbxref=Genbank:WP_038423936.1;Name=WP_038423936.1;gbkey=CDS;gene=rmuC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014227478.1;locus_tag=PHA56_RS26830;product=DNA recombination protein RmuC;protein_id=WP_038423936.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5684414 5685175 . - . ID=gene-PHA56_RS26835;Name=udp;gbkey=Gene;gene=udp;gene_biotype=protein_coding;locus_tag=PHA56_RS26835;old_locus_tag=PHA56_26835 NZ_CP116214.1 Protein Homology CDS 5684414 5685175 . - 0 ID=cds-WP_004097583.1;Parent=gene-PHA56_RS26835;Dbxref=Genbank:WP_004097583.1;Name=WP_004097583.1;Ontology_term=GO:0009116,GO:0016763;gbkey=CDS;gene=udp;go_function=pentosyltransferase activity|0016763||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224472.1;locus_tag=PHA56_RS26835;product=uridine phosphorylase;protein_id=WP_004097583.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5685443 5686255 . + . ID=gene-PHA56_RS26840;Name=PHA56_RS26840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS26840;old_locus_tag=PHA56_26840 NZ_CP116214.1 Protein Homology CDS 5685443 5686255 . + 0 ID=cds-WP_004097582.1;Parent=gene-PHA56_RS26840;Dbxref=Genbank:WP_004097582.1;Name=WP_004097582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224471.1;locus_tag=PHA56_RS26840;product=dienelactone hydrolase family protein;protein_id=WP_004097582.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5686259 5686948 . - . ID=gene-PHA56_RS26845;Name=PHA56_RS26845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS26845;old_locus_tag=PHA56_26845 NZ_CP116214.1 Protein Homology CDS 5686259 5686948 . - 0 ID=cds-WP_025108394.1;Parent=gene-PHA56_RS26845;Dbxref=Genbank:WP_025108394.1;Name=WP_025108394.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014837087.1;locus_tag=PHA56_RS26845;product=transporter substrate-binding domain-containing protein;protein_id=WP_025108394.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5687155 5689416 . - . ID=gene-PHA56_RS26850;Name=metE;gbkey=Gene;gene=metE;gene_biotype=protein_coding;locus_tag=PHA56_RS26850;old_locus_tag=PHA56_26850 NZ_CP116214.1 Protein Homology CDS 5687155 5689416 . - 0 ID=cds-WP_014227476.1;Parent=gene-PHA56_RS26850;Dbxref=Genbank:WP_014227476.1;Name=WP_014227476.1;Ontology_term=GO:0008652,GO:0009086,GO:0003871,GO:0008270;gbkey=CDS;gene=metE;go_function=5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity|0003871||IEA,zinc ion binding|0008270||IEA;go_process=amino acid biosynthetic process|0008652||IEA,methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015585396.1;locus_tag=PHA56_RS26850;product=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase;protein_id=WP_014227476.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5689649 5690602 . + . ID=gene-PHA56_RS26855;Name=metR;gbkey=Gene;gene=metR;gene_biotype=protein_coding;locus_tag=PHA56_RS26855;old_locus_tag=PHA56_26855 NZ_CP116214.1 Protein Homology CDS 5689649 5690602 . + 0 ID=cds-WP_014227475.1;Parent=gene-PHA56_RS26855;Dbxref=Genbank:WP_014227475.1;Name=WP_014227475.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=metR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012969186.1;locus_tag=PHA56_RS26855;product=HTH-type transcriptional regulator MetR;protein_id=WP_014227475.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5690490 5691389 . - . ID=gene-PHA56_RS26860;Name=PHA56_RS26860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS26860;old_locus_tag=PHA56_26860 NZ_CP116214.1 Protein Homology CDS 5690490 5691389 . - 0 ID=cds-WP_014227474.1;Parent=gene-PHA56_RS26860;Dbxref=Genbank:WP_014227474.1;Name=WP_014227474.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312784.1;locus_tag=PHA56_RS26860;product=carboxylate/amino acid/amine transporter;protein_id=WP_014227474.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5691478 5692278 . - . ID=gene-PHA56_RS26865;Name=yigL;gbkey=Gene;gene=yigL;gene_biotype=protein_coding;locus_tag=PHA56_RS26865;old_locus_tag=PHA56_26865 NZ_CP116214.1 Protein Homology CDS 5691478 5692278 . - 0 ID=cds-WP_014227473.1;Parent=gene-PHA56_RS26865;Dbxref=Genbank:WP_014227473.1;Name=WP_014227473.1;gbkey=CDS;gene=yigL;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224468.1;locus_tag=PHA56_RS26865;product=sugar/pyridoxal phosphate phosphatase YigL;protein_id=WP_014227473.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5692322 5693314 . - . ID=gene-PHA56_RS26870;Name=pldB;gbkey=Gene;gene=pldB;gene_biotype=protein_coding;locus_tag=PHA56_RS26870;old_locus_tag=PHA56_26870 NZ_CP116214.1 Protein Homology CDS 5692322 5693314 . - 0 ID=cds-WP_004097574.1;Parent=gene-PHA56_RS26870;Dbxref=Genbank:WP_004097574.1;Name=WP_004097574.1;gbkey=CDS;gene=pldB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224467.1;locus_tag=PHA56_RS26870;product=lysophospholipase L2;protein_id=WP_004097574.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5693424 5694044 . + . ID=gene-PHA56_RS26875;Name=rhtB;gbkey=Gene;gene=rhtB;gene_biotype=protein_coding;locus_tag=PHA56_RS26875;old_locus_tag=PHA56_26875 NZ_CP116214.1 Protein Homology CDS 5693424 5694044 . + 0 ID=cds-WP_014227472.1;Parent=gene-PHA56_RS26875;Dbxref=Genbank:WP_014227472.1;Name=WP_014227472.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;gene=rhtB;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224466.1;locus_tag=PHA56_RS26875;product=homoserine/homoserine lactone efflux protein;protein_id=WP_014227472.1;transl_table=11 NZ_CP116214.1 RefSeq pseudogene 5694048 5694353 . + . ID=gene-PHA56_RS26880;Name=PHA56_RS26880;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS26880;old_locus_tag=PHA56_26880;partial=true;pseudo=true;start_range=.,5694048 NZ_CP116214.1 Protein Homology CDS 5694048 5694353 . + 0 ID=cds-PHA56_RS26880;Parent=gene-PHA56_RS26880;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015959228.1;locus_tag=PHA56_RS26880;partial=true;product=Rpn family recombination-promoting nuclease/putative transposase;pseudo=true;start_range=.,5694048;transl_table=11 NZ_CP116214.1 RefSeq gene 5694395 5695018 . - . ID=gene-PHA56_RS26885;Name=rhtC;gbkey=Gene;gene=rhtC;gene_biotype=protein_coding;locus_tag=PHA56_RS26885;old_locus_tag=PHA56_26885 NZ_CP116214.1 Protein Homology CDS 5694395 5695018 . - 0 ID=cds-WP_004097571.1;Parent=gene-PHA56_RS26885;Dbxref=Genbank:WP_004097571.1;Name=WP_004097571.1;Ontology_term=GO:0006865;gbkey=CDS;gene=rhtC;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224464.1;locus_tag=PHA56_RS26885;product=threonine export protein RhtC;protein_id=WP_004097571.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5695080 5696906 . - . ID=gene-PHA56_RS26890;Name=recQ;gbkey=Gene;gene=recQ;gene_biotype=protein_coding;locus_tag=PHA56_RS26890;old_locus_tag=PHA56_26890 NZ_CP116214.1 Protein Homology CDS 5695080 5696906 . - 0 ID=cds-WP_004097570.1;Parent=gene-PHA56_RS26890;Dbxref=Genbank:WP_004097570.1;Name=WP_004097570.1;Ontology_term=GO:0006310,GO:0003678;gbkey=CDS;gene=recQ;go_function=DNA helicase activity|0003678||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224463.1;locus_tag=PHA56_RS26890;product=ATP-dependent DNA helicase RecQ;protein_id=WP_004097570.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5696974 5697846 . - . ID=gene-PHA56_RS26895;Name=pldA;gbkey=Gene;gene=pldA;gene_biotype=protein_coding;locus_tag=PHA56_RS26895;old_locus_tag=PHA56_26895 NZ_CP116214.1 Protein Homology CDS 5696974 5697846 . - 0 ID=cds-WP_119834674.1;Parent=gene-PHA56_RS26895;Dbxref=Genbank:WP_119834674.1;Name=WP_119834674.1;Ontology_term=GO:0006629,GO:0004620;gbkey=CDS;gene=pldA;go_function=phospholipase activity|0004620||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224462.1;locus_tag=PHA56_RS26895;product=phospholipase A;protein_id=WP_119834674.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5698002 5698466 . + . ID=gene-PHA56_RS26900;Name=PHA56_RS26900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS26900;old_locus_tag=PHA56_26900 NZ_CP116214.1 Protein Homology CDS 5698002 5698466 . + 0 ID=cds-WP_004097567.1;Parent=gene-PHA56_RS26900;Dbxref=Genbank:WP_004097567.1;Name=WP_004097567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224461.1;locus_tag=PHA56_RS26900;product=acyl-CoA thioesterase YigI;protein_id=WP_004097567.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5698516 5699409 . + . ID=gene-PHA56_RS26905;Name=rarD;gbkey=Gene;gene=rarD;gene_biotype=protein_coding;locus_tag=PHA56_RS26905;old_locus_tag=PHA56_26905 NZ_CP116214.1 Protein Homology CDS 5698516 5699409 . + 0 ID=cds-WP_014227470.1;Parent=gene-PHA56_RS26905;Dbxref=Genbank:WP_014227470.1;Name=WP_014227470.1;Ontology_term=GO:0016020;gbkey=CDS;gene=rarD;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004107689.1;locus_tag=PHA56_RS26905;product=EamA family transporter RarD;protein_id=WP_014227470.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5699451 5700401 . - . ID=gene-PHA56_RS26910;Name=corA;gbkey=Gene;gene=corA;gene_biotype=protein_coding;locus_tag=PHA56_RS26910;old_locus_tag=PHA56_26910 NZ_CP116214.1 Protein Homology CDS 5699451 5700401 . - 0 ID=cds-WP_004097564.1;Parent=gene-PHA56_RS26910;Dbxref=Genbank:WP_004097564.1;Name=WP_004097564.1;Ontology_term=GO:0006824,GO:0015693,GO:0015087,GO:0015095;gbkey=CDS;gene=corA;go_function=cobalt ion transmembrane transporter activity|0015087||IEA,magnesium ion transmembrane transporter activity|0015095||IEA;go_process=cobalt ion transport|0006824||IEA,magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000947142.1;locus_tag=PHA56_RS26910;product=magnesium/cobalt transporter CorA;protein_id=WP_004097564.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5700756 5702918 . - . ID=gene-PHA56_RS26915;Name=uvrD;gbkey=Gene;gene=uvrD;gene_biotype=protein_coding;gene_synonym=mutU,recL;locus_tag=PHA56_RS26915;old_locus_tag=PHA56_26915 NZ_CP116214.1 Protein Homology CDS 5700756 5702918 . - 0 ID=cds-WP_004127467.1;Parent=gene-PHA56_RS26915;Dbxref=Genbank:WP_004127467.1;Name=WP_004127467.1;Ontology_term=GO:0006268,GO:0003677,GO:0003678,GO:0005524,GO:0016787;gbkey=CDS;gene=uvrD;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;go_process=DNA unwinding involved in DNA replication|0006268||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224457.1;locus_tag=PHA56_RS26915;product=DNA helicase II;protein_id=WP_004127467.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5702996 5703712 . - . ID=gene-PHA56_RS26920;Name=yigB;gbkey=Gene;gene=yigB;gene_biotype=protein_coding;locus_tag=PHA56_RS26920;old_locus_tag=PHA56_26920 NZ_CP116214.1 Protein Homology CDS 5702996 5703712 . - 0 ID=cds-WP_014227468.1;Parent=gene-PHA56_RS26920;Dbxref=Genbank:WP_014227468.1;Name=WP_014227468.1;gbkey=CDS;gene=yigB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224456.1;locus_tag=PHA56_RS26920;product=5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB;protein_id=WP_014227468.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5703712 5704614 . - . ID=gene-PHA56_RS26925;Name=xerC;gbkey=Gene;gene=xerC;gene_biotype=protein_coding;locus_tag=PHA56_RS26925;old_locus_tag=PHA56_26925 NZ_CP116214.1 Protein Homology CDS 5703712 5704614 . - 0 ID=cds-WP_038423935.1;Parent=gene-PHA56_RS26925;Dbxref=Genbank:WP_038423935.1;Name=WP_038423935.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;gene=xerC;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224455.1;locus_tag=PHA56_RS26925;product=tyrosine recombinase XerC;protein_id=WP_038423935.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5704611 5705318 . - . ID=gene-PHA56_RS26930;Name=PHA56_RS26930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS26930;old_locus_tag=PHA56_26930 NZ_CP116214.1 Protein Homology CDS 5704611 5705318 . - 0 ID=cds-WP_014227467.1;Parent=gene-PHA56_RS26930;Dbxref=Genbank:WP_014227467.1;Name=WP_014227467.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224454.1;locus_tag=PHA56_RS26930;product=DUF484 domain-containing protein;protein_id=WP_014227467.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5705315 5706139 . - . ID=gene-PHA56_RS26935;Name=dapF;gbkey=Gene;gene=dapF;gene_biotype=protein_coding;locus_tag=PHA56_RS26935;old_locus_tag=PHA56_26935 NZ_CP116214.1 Protein Homology CDS 5705315 5706139 . - 0 ID=cds-WP_004127458.1;Parent=gene-PHA56_RS26935;Dbxref=Genbank:WP_004127458.1;Name=WP_004127458.1;Ontology_term=GO:0009089,GO:0008837;gbkey=CDS;gene=dapF;go_function=diaminopimelate epimerase activity|0008837||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133314.1;locus_tag=PHA56_RS26935;product=diaminopimelate epimerase;protein_id=WP_004127458.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5706165 5706368 . - . ID=gene-PHA56_RS26940;Name=PHA56_RS26940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS26940;old_locus_tag=PHA56_26940 NZ_CP116214.1 Protein Homology CDS 5706165 5706368 . - 0 ID=cds-WP_009651708.1;Parent=gene-PHA56_RS26940;Dbxref=Genbank:WP_009651708.1;Name=WP_009651708.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224452.1;locus_tag=PHA56_RS26940;product=lipoprotein;protein_id=WP_009651708.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5706532 5707992 . - . ID=gene-PHA56_RS26945;Name=PHA56_RS26945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS26945;old_locus_tag=PHA56_26945 NZ_CP116214.1 Protein Homology CDS 5706532 5707992 . - 0 ID=cds-WP_014227466.1;Parent=gene-PHA56_RS26945;Dbxref=Genbank:WP_014227466.1;Name=WP_014227466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009651706.1;locus_tag=PHA56_RS26945;product=PLP-dependent aminotransferase family protein;protein_id=WP_014227466.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5708125 5709771 . + . ID=gene-PHA56_RS26950;Name=PHA56_RS26950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS26950;old_locus_tag=PHA56_26950 NZ_CP116214.1 Protein Homology CDS 5708125 5709771 . + 0 ID=cds-WP_038423934.1;Parent=gene-PHA56_RS26950;Dbxref=Genbank:WP_038423934.1;Name=WP_038423934.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014227465.1;locus_tag=PHA56_RS26950;product=amidohydrolase;protein_id=WP_038423934.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5709976 5711652 . + . ID=gene-PHA56_RS26955;Name=PHA56_RS26955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS26955;old_locus_tag=PHA56_26955 NZ_CP116214.1 Protein Homology CDS 5709976 5711652 . + 0 ID=cds-WP_049069449.1;Parent=gene-PHA56_RS26955;Dbxref=Genbank:WP_049069449.1;Name=WP_049069449.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004127447.1;locus_tag=PHA56_RS26955;product=MFS transporter;protein_id=WP_049069449.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5711739 5713322 . + . ID=gene-PHA56_RS26960;Name=PHA56_RS26960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS26960;old_locus_tag=PHA56_26960 NZ_CP116214.1 Protein Homology CDS 5711739 5713322 . + 0 ID=cds-WP_038423933.1;Parent=gene-PHA56_RS26960;Dbxref=Genbank:WP_038423933.1;Name=WP_038423933.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014837078.1;locus_tag=PHA56_RS26960;product=MFS transporter;protein_id=WP_038423933.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5713367 5713687 . + . ID=gene-PHA56_RS26965;Name=cyaY;gbkey=Gene;gene=cyaY;gene_biotype=protein_coding;locus_tag=PHA56_RS26965;old_locus_tag=PHA56_26965 NZ_CP116214.1 Protein Homology CDS 5713367 5713687 . + 0 ID=cds-WP_004097546.1;Parent=gene-PHA56_RS26965;Dbxref=Genbank:WP_004097546.1;Name=WP_004097546.1;Ontology_term=GO:0016226,GO:0005506;gbkey=CDS;gene=cyaY;go_function=iron ion binding|0005506||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000999950.1;locus_tag=PHA56_RS26965;product=iron donor protein CyaY;protein_id=WP_004097546.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5713824 5716373 . - . ID=gene-PHA56_RS26970;Name=cyaA;gbkey=Gene;gene=cyaA;gene_biotype=protein_coding;locus_tag=PHA56_RS26970;old_locus_tag=PHA56_26970 NZ_CP116214.1 Protein Homology CDS 5713824 5716373 . - 0 ID=cds-WP_009651720.1;Parent=gene-PHA56_RS26970;Dbxref=Genbank:WP_009651720.1;Name=WP_009651720.1;Ontology_term=GO:0006171,GO:0004016;gbkey=CDS;gene=cyaA;go_function=adenylate cyclase activity|0004016||IEA;go_process=cAMP biosynthetic process|0006171||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224450.1;locus_tag=PHA56_RS26970;product=class I adenylate cyclase;protein_id=WP_009651720.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5716720 5717661 . + . ID=gene-PHA56_RS26975;Name=hemC;gbkey=Gene;gene=hemC;gene_biotype=protein_coding;locus_tag=PHA56_RS26975;old_locus_tag=PHA56_26975 NZ_CP116214.1 Protein Homology CDS 5716720 5717661 . + 0 ID=cds-WP_032693764.1;Parent=gene-PHA56_RS26975;Dbxref=Genbank:WP_032693764.1;Name=WP_032693764.1;Ontology_term=GO:0006779,GO:0004418,GO:0005737;gbkey=CDS;gene=hemC;go_component=cytoplasm|0005737||IEA;go_function=hydroxymethylbilane synthase activity|0004418||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224448.1;locus_tag=PHA56_RS26975;product=hydroxymethylbilane synthase;protein_id=WP_032693764.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5717658 5718398 . + . ID=gene-PHA56_RS26980;Name=hemD;gbkey=Gene;gene=hemD;gene_biotype=protein_coding;locus_tag=PHA56_RS26980;old_locus_tag=PHA56_26980 NZ_CP116214.1 Protein Homology CDS 5717658 5718398 . + 0 ID=cds-WP_004097542.1;Parent=gene-PHA56_RS26980;Dbxref=Genbank:WP_004097542.1;Name=WP_004097542.1;Ontology_term=GO:0006780,GO:0004852;gbkey=CDS;gene=hemD;go_function=uroporphyrinogen-III synthase activity|0004852||IEA;go_process=uroporphyrinogen III biosynthetic process|0006780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224447.1;locus_tag=PHA56_RS26980;product=uroporphyrinogen-III synthase;protein_id=WP_004097542.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5718420 5719610 . + . ID=gene-PHA56_RS26985;Name=hemX;gbkey=Gene;gene=hemX;gene_biotype=protein_coding;locus_tag=PHA56_RS26985;old_locus_tag=PHA56_26985 NZ_CP116214.1 Protein Homology CDS 5718420 5719610 . + 0 ID=cds-WP_004097536.1;Parent=gene-PHA56_RS26985;Dbxref=Genbank:WP_004097536.1;Name=WP_004097536.1;gbkey=CDS;gene=hemX;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224446.1;locus_tag=PHA56_RS26985;product=uroporphyrinogen-III C-methyltransferase;protein_id=WP_004097536.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5719614 5720810 . + . ID=gene-PHA56_RS26990;Name=hemY;gbkey=Gene;gene=hemY;gene_biotype=protein_coding;locus_tag=PHA56_RS26990;old_locus_tag=PHA56_26990 NZ_CP116214.1 Protein Homology CDS 5719614 5720810 . + 0 ID=cds-WP_004097533.1;Parent=gene-PHA56_RS26990;Dbxref=Genbank:WP_004097533.1;Name=WP_004097533.1;Ontology_term=GO:0042168,GO:0005515,GO:0016020;gbkey=CDS;gene=hemY;go_component=membrane|0016020||IEA;go_function=protein binding|0005515||IEA;go_process=heme metabolic process|0042168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312759.1;locus_tag=PHA56_RS26990;product=protoheme IX biogenesis protein HemY;protein_id=WP_004097533.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5721396 5721472 . - . ID=gene-PHA56_RS26995;Name=PHA56_RS26995;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA56_RS26995;old_locus_tag=PHA56_26995 NZ_CP116214.1 tRNAscan-SE tRNA 5721396 5721472 . - . ID=rna-PHA56_RS26995;Parent=gene-PHA56_RS26995;anticodon=(pos:complement(5721436..5721438));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS26995;product=tRNA-Pro NZ_CP116214.1 tRNAscan-SE exon 5721396 5721472 . - . ID=exon-PHA56_RS26995-1;Parent=rna-PHA56_RS26995;anticodon=(pos:complement(5721436..5721438));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS26995;product=tRNA-Pro NZ_CP116214.1 RefSeq gene 5721518 5721604 . - . ID=gene-PHA56_RS27000;Name=PHA56_RS27000;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA56_RS27000;old_locus_tag=PHA56_27000 NZ_CP116214.1 tRNAscan-SE tRNA 5721518 5721604 . - . ID=rna-PHA56_RS27000;Parent=gene-PHA56_RS27000;anticodon=(pos:complement(5721568..5721570));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS27000;product=tRNA-Leu NZ_CP116214.1 tRNAscan-SE exon 5721518 5721604 . - . ID=exon-PHA56_RS27000-1;Parent=rna-PHA56_RS27000;anticodon=(pos:complement(5721568..5721570));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS27000;product=tRNA-Leu NZ_CP116214.1 RefSeq gene 5721627 5721702 . - . ID=gene-PHA56_RS27005;Name=PHA56_RS27005;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA56_RS27005;old_locus_tag=PHA56_27005 NZ_CP116214.1 tRNAscan-SE tRNA 5721627 5721702 . - . ID=rna-PHA56_RS27005;Parent=gene-PHA56_RS27005;anticodon=(pos:complement(5721667..5721669));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS27005;product=tRNA-His NZ_CP116214.1 tRNAscan-SE exon 5721627 5721702 . - . ID=exon-PHA56_RS27005-1;Parent=rna-PHA56_RS27005;anticodon=(pos:complement(5721667..5721669));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS27005;product=tRNA-His NZ_CP116214.1 RefSeq gene 5721758 5721834 . - . ID=gene-PHA56_RS27010;Name=PHA56_RS27010;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA56_RS27010;old_locus_tag=PHA56_27010 NZ_CP116214.1 tRNAscan-SE tRNA 5721758 5721834 . - . ID=rna-PHA56_RS27010;Parent=gene-PHA56_RS27010;anticodon=(pos:complement(5721798..5721800));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS27010;product=tRNA-Arg NZ_CP116214.1 tRNAscan-SE exon 5721758 5721834 . - . ID=exon-PHA56_RS27010-1;Parent=rna-PHA56_RS27010;anticodon=(pos:complement(5721798..5721800));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS27010;product=tRNA-Arg NZ_CP116214.1 RefSeq gene 5721937 5723322 . - . ID=gene-PHA56_RS27015;Name=PHA56_RS27015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS27015;old_locus_tag=PHA56_27015 NZ_CP116214.1 Protein Homology CDS 5721937 5723322 . - 0 ID=cds-WP_014227461.1;Parent=gene-PHA56_RS27015;Dbxref=Genbank:WP_014227461.1;Name=WP_014227461.1;Ontology_term=GO:0006865,GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224443.1;locus_tag=PHA56_RS27015;product=amino acid permease;protein_id=WP_014227461.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5723554 5724294 . - . ID=gene-PHA56_RS27020;Name=rffM;gbkey=Gene;gene=rffM;gene_biotype=protein_coding;locus_tag=PHA56_RS27020;old_locus_tag=PHA56_27020 NZ_CP116214.1 Protein Homology CDS 5723554 5724294 . - 0 ID=cds-WP_014227460.1;Parent=gene-PHA56_RS27020;Dbxref=Genbank:WP_014227460.1;Name=WP_014227460.1;Ontology_term=GO:0016740;gbkey=CDS;gene=rffM;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224442.1;locus_tag=PHA56_RS27020;product=lipopolysaccharide N-acetylmannosaminouronosyltransferase;protein_id=WP_014227460.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5724306 5725652 . - . ID=gene-PHA56_RS27025;Name=wzyE;gbkey=Gene;gene=wzyE;gene_biotype=protein_coding;locus_tag=PHA56_RS27025;old_locus_tag=PHA56_27025 NZ_CP116214.1 Protein Homology CDS 5724306 5725652 . - 0 ID=cds-WP_014227459.1;Parent=gene-PHA56_RS27025;Dbxref=Genbank:WP_014227459.1;Name=WP_014227459.1;Ontology_term=GO:0009246,GO:0016020;gbkey=CDS;gene=wzyE;go_component=membrane|0016020||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224441.1;locus_tag=PHA56_RS27025;product=ECA oligosaccharide polymerase;protein_id=WP_014227459.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5725649 5726728 . - . ID=gene-PHA56_RS27030;Name=PHA56_RS27030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS27030;old_locus_tag=PHA56_27030 NZ_CP116214.1 Protein Homology CDS 5725649 5726728 . - 0 ID=cds-WP_032693765.1;Parent=gene-PHA56_RS27030;Dbxref=Genbank:WP_032693765.1;Name=WP_032693765.1;Ontology_term=GO:0036065,GO:0008417;gbkey=CDS;go_function=fucosyltransferase activity|0008417||IEA;go_process=fucosylation|0036065||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224440.1;locus_tag=PHA56_RS27030;product=TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase;protein_id=WP_032693765.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5726725 5727975 . - . ID=gene-PHA56_RS27035;Name=wzxE;gbkey=Gene;gene=wzxE;gene_biotype=protein_coding;locus_tag=PHA56_RS27035;old_locus_tag=PHA56_27035 NZ_CP116214.1 Protein Homology CDS 5726725 5727975 . - 0 ID=cds-WP_014227457.1;Parent=gene-PHA56_RS27035;Dbxref=Genbank:WP_014227457.1;Name=WP_014227457.1;Ontology_term=GO:0009246,GO:0016020;gbkey=CDS;gene=wzxE;go_component=membrane|0016020||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224439.1;locus_tag=PHA56_RS27035;product=lipid III flippase WzxE;protein_id=WP_014227457.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5727977 5729107 . - . ID=gene-PHA56_RS27040;Name=rffA;gbkey=Gene;gene=rffA;gene_biotype=protein_coding;gene_synonym=fcnA,wecE;locus_tag=PHA56_RS27040;old_locus_tag=PHA56_27040 NZ_CP116214.1 Protein Homology CDS 5727977 5729107 . - 0 ID=cds-WP_032720774.1;Parent=gene-PHA56_RS27040;Dbxref=Genbank:WP_032720774.1;Name=WP_032720774.1;Ontology_term=GO:0009246,GO:0019180;gbkey=CDS;gene=rffA;go_function=dTDP-4-amino-4%2C6-dideoxygalactose transaminase activity|0019180||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224438.1;locus_tag=PHA56_RS27040;product=dTDP-4-amino-4%2C6-dideoxygalactose transaminase;protein_id=WP_032720774.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5729112 5729786 . - . ID=gene-PHA56_RS27045;Name=rffC;gbkey=Gene;gene=rffC;gene_biotype=protein_coding;gene_synonym=wecD;locus_tag=PHA56_RS27045;old_locus_tag=PHA56_27045 NZ_CP116214.1 Protein Homology CDS 5729112 5729786 . - 0 ID=cds-WP_038423932.1;Parent=gene-PHA56_RS27045;Dbxref=Genbank:WP_038423932.1;Name=WP_038423932.1;Ontology_term=GO:0008080;gbkey=CDS;gene=rffC;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224437.1;locus_tag=PHA56_RS27045;product=dTDP-4-amino-4%2C6-dideoxy-D-galactose acyltransferase;protein_id=WP_038423932.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5729764 5730645 . - . ID=gene-PHA56_RS27050;Name=rfbA;gbkey=Gene;gene=rfbA;gene_biotype=protein_coding;locus_tag=PHA56_RS27050;old_locus_tag=PHA56_27050 NZ_CP116214.1 Protein Homology CDS 5729764 5730645 . - 0 ID=cds-WP_032720760.1;Parent=gene-PHA56_RS27050;Dbxref=Genbank:WP_032720760.1;Name=WP_032720760.1;Ontology_term=GO:0009243,GO:0019305,GO:0008879;gbkey=CDS;gene=rfbA;go_function=glucose-1-phosphate thymidylyltransferase activity|0008879||IEA;go_process=O antigen biosynthetic process|0009243||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133346.1;locus_tag=PHA56_RS27050;product=glucose-1-phosphate thymidylyltransferase RfbA;protein_id=WP_032720760.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5730663 5731730 . - . ID=gene-PHA56_RS27055;Name=rffG;gbkey=Gene;gene=rffG;gene_biotype=protein_coding;locus_tag=PHA56_RS27055;old_locus_tag=PHA56_27055 NZ_CP116214.1 Protein Homology CDS 5730663 5731730 . - 0 ID=cds-WP_032720759.1;Parent=gene-PHA56_RS27055;Dbxref=Genbank:WP_032720759.1;Name=WP_032720759.1;Ontology_term=GO:0009225,GO:0008460;gbkey=CDS;gene=rffG;go_function=dTDP-glucose 4%2C6-dehydratase activity|0008460||IEA;go_process=nucleotide-sugar metabolic process|0009225||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224435.1;locus_tag=PHA56_RS27055;product=dTDP-glucose 4%2C6-dehydratase;protein_id=WP_032720759.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5731727 5732989 . - . ID=gene-PHA56_RS27060;Name=wecC;gbkey=Gene;gene=wecC;gene_biotype=protein_coding;locus_tag=PHA56_RS27060;old_locus_tag=PHA56_27060 NZ_CP116214.1 Protein Homology CDS 5731727 5732989 . - 0 ID=cds-WP_014837068.1;Parent=gene-PHA56_RS27060;Dbxref=Genbank:WP_014837068.1;Name=WP_014837068.1;Ontology_term=GO:0009246,GO:0051287,GO:0089714;gbkey=CDS;gene=wecC;go_function=NAD binding|0051287||IEA,UDP-N-acetyl-D-mannosamine dehydrogenase activity|0089714||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224434.1;locus_tag=PHA56_RS27060;product=UDP-N-acetyl-D-mannosamine dehydrogenase;protein_id=WP_014837068.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5732986 5734116 . - . ID=gene-PHA56_RS27065;Name=wecB;gbkey=Gene;gene=wecB;gene_biotype=protein_coding;locus_tag=PHA56_RS27065;old_locus_tag=PHA56_27065 NZ_CP116214.1 Protein Homology CDS 5732986 5734116 . - 0 ID=cds-WP_004097518.1;Parent=gene-PHA56_RS27065;Dbxref=Genbank:WP_004097518.1;Name=WP_004097518.1;Ontology_term=GO:0009103,GO:0008761;gbkey=CDS;gene=wecB;go_function=UDP-N-acetylglucosamine 2-epimerase activity|0008761||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462810.1;locus_tag=PHA56_RS27065;product=UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing);protein_id=WP_004097518.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5734173 5735219 . - . ID=gene-PHA56_RS27070;Name=wzzE;gbkey=Gene;gene=wzzE;gene_biotype=protein_coding;locus_tag=PHA56_RS27070;old_locus_tag=PHA56_27070 NZ_CP116214.1 Protein Homology CDS 5734173 5735219 . - 0 ID=cds-WP_014227454.1;Parent=gene-PHA56_RS27070;Dbxref=Genbank:WP_014227454.1;Name=WP_014227454.1;Ontology_term=GO:0009103,GO:0009246,GO:0016020;gbkey=CDS;gene=wzzE;go_component=membrane|0016020||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA,enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020077604.1;locus_tag=PHA56_RS27070;product=ECA polysaccharide chain length modulation protein;protein_id=WP_014227454.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5735241 5736335 . - . ID=gene-PHA56_RS27075;Name=wecA;gbkey=Gene;gene=wecA;gene_biotype=protein_coding;locus_tag=PHA56_RS27075;old_locus_tag=PHA56_27075 NZ_CP116214.1 Protein Homology CDS 5735241 5736335 . - 0 ID=cds-WP_004097511.1;Parent=gene-PHA56_RS27075;Dbxref=Genbank:WP_004097511.1;Name=WP_004097511.1;Ontology_term=GO:0009246,GO:0016780;gbkey=CDS;gene=wecA;go_function=phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004127391.1;locus_tag=PHA56_RS27075;product=UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase;protein_id=WP_004097511.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5736578 5737837 . - . ID=gene-PHA56_RS27080;Name=rho;gbkey=Gene;gene=rho;gene_biotype=protein_coding;locus_tag=PHA56_RS27080;old_locus_tag=PHA56_27080 NZ_CP116214.1 Protein Homology CDS 5736578 5737837 . - 0 ID=cds-WP_002883293.1;Parent=gene-PHA56_RS27080;Dbxref=Genbank:WP_002883293.1;Name=WP_002883293.1;Ontology_term=GO:0006353,GO:0004386,GO:0008186;gbkey=CDS;gene=rho;go_function=helicase activity|0004386||IEA,ATP-dependent activity%2C acting on RNA|0008186||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017492510.1;locus_tag=PHA56_RS27080;product=transcription termination factor Rho;protein_id=WP_002883293.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5738167 5738496 . - . ID=gene-PHA56_RS27085;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=PHA56_RS27085;old_locus_tag=PHA56_27085 NZ_CP116214.1 Protein Homology CDS 5738167 5738496 . - 0 ID=cds-WP_004097507.1;Parent=gene-PHA56_RS27085;Dbxref=Genbank:WP_004097507.1;Name=WP_004097507.1;Ontology_term=GO:0006662,GO:0015035;gbkey=CDS;gene=trxA;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=glycerol ether metabolic process|0006662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017375425.1;locus_tag=PHA56_RS27085;product=thioredoxin TrxA;protein_id=WP_004097507.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5738838 5740103 . + . ID=gene-PHA56_RS27090;Name=rhlB;gbkey=Gene;gene=rhlB;gene_biotype=protein_coding;locus_tag=PHA56_RS27090;old_locus_tag=PHA56_27090 NZ_CP116214.1 Protein Homology CDS 5738838 5740103 . + 0 ID=cds-WP_004127388.1;Parent=gene-PHA56_RS27090;Dbxref=Genbank:WP_004127388.1;Name=WP_004127388.1;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=rhlB;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224428.1;locus_tag=PHA56_RS27090;product=ATP-dependent RNA helicase RhlB;protein_id=WP_004127388.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5740229 5741725 . + . ID=gene-PHA56_RS27095;Name=gppA;gbkey=Gene;gene=gppA;gene_biotype=protein_coding;locus_tag=PHA56_RS27095;old_locus_tag=PHA56_27095 NZ_CP116214.1 Protein Homology CDS 5740229 5741725 . + 0 ID=cds-WP_162933661.1;Parent=gene-PHA56_RS27095;Dbxref=Genbank:WP_162933661.1;Name=WP_162933661.1;Ontology_term=GO:0015974,GO:0008894;gbkey=CDS;gene=gppA;go_function=guanosine-5'-triphosphate%2C3'-diphosphate diphosphatase activity|0008894||IEA;go_process=guanosine pentaphosphate catabolic process|0015974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015368887.1;locus_tag=PHA56_RS27095;product=guanosine-5'-triphosphate%2C3'-diphosphate diphosphatase;protein_id=WP_162933661.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5741790 5742530 . - . ID=gene-PHA56_RS27100;Name=PHA56_RS27100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS27100;old_locus_tag=PHA56_27100 NZ_CP116214.1 Protein Homology CDS 5741790 5742530 . - 0 ID=cds-WP_004097500.1;Parent=gene-PHA56_RS27100;Dbxref=Genbank:WP_004097500.1;Name=WP_004097500.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004097500.1;locus_tag=PHA56_RS27100;product=GntR family transcriptional regulator;protein_id=WP_004097500.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5742752 5743768 . + . ID=gene-PHA56_RS27105;Name=PHA56_RS27105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS27105;old_locus_tag=PHA56_27105 NZ_CP116214.1 Protein Homology CDS 5742752 5743768 . + 0 ID=cds-WP_038423931.1;Parent=gene-PHA56_RS27105;Dbxref=Genbank:WP_038423931.1;Name=WP_038423931.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004107627.1;locus_tag=PHA56_RS27105;product=ADP-ribosylglycohydrolase family protein;protein_id=WP_038423931.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5743787 5745202 . + . ID=gene-PHA56_RS27110;Name=PHA56_RS27110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS27110;old_locus_tag=PHA56_27110 NZ_CP116214.1 Protein Homology CDS 5743787 5745202 . + 0 ID=cds-WP_014837065.1;Parent=gene-PHA56_RS27110;Dbxref=Genbank:WP_014837065.1;Name=WP_014837065.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004107625.1;locus_tag=PHA56_RS27110;product=cytosine permease;protein_id=WP_014837065.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5745186 5746148 . + . ID=gene-PHA56_RS27115;Name=PHA56_RS27115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS27115;old_locus_tag=PHA56_27115 NZ_CP116214.1 Protein Homology CDS 5745186 5746148 . + 0 ID=cds-WP_038423930.1;Parent=gene-PHA56_RS27115;Dbxref=Genbank:WP_038423930.1;Name=WP_038423930.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004116961.1;locus_tag=PHA56_RS27115;product=PfkB family carbohydrate kinase;protein_id=WP_038423930.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5746152 5748170 . - . ID=gene-PHA56_RS27120;Name=rep;gbkey=Gene;gene=rep;gene_biotype=protein_coding;locus_tag=PHA56_RS27120;old_locus_tag=PHA56_27120 NZ_CP116214.1 Protein Homology CDS 5746152 5748170 . - 0 ID=cds-WP_014227450.1;Parent=gene-PHA56_RS27120;Dbxref=Genbank:WP_014227450.1;Name=WP_014227450.1;Ontology_term=GO:0006268,GO:0003678;gbkey=CDS;gene=rep;go_function=DNA helicase activity|0003678||IEA;go_process=DNA unwinding involved in DNA replication|0006268||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004133299.1;locus_tag=PHA56_RS27120;product=DNA helicase Rep;protein_id=WP_014227450.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5748273 5749001 . - . ID=gene-PHA56_RS27125;Name=pnuC;gbkey=Gene;gene=pnuC;gene_biotype=protein_coding;locus_tag=PHA56_RS27125;old_locus_tag=PHA56_27125 NZ_CP116214.1 Protein Homology CDS 5748273 5749001 . - 0 ID=cds-WP_004097491.1;Parent=gene-PHA56_RS27125;Dbxref=Genbank:WP_004097491.1;Name=WP_004097491.1;Ontology_term=GO:0015890,GO:0015663,GO:0016020;gbkey=CDS;gene=pnuC;go_component=membrane|0016020||IEA;go_function=nicotinamide mononucleotide transmembrane transporter activity|0015663||IEA;go_process=nicotinamide mononucleotide transport|0015890||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004097491.1;locus_tag=PHA56_RS27125;product=nicotinamide riboside transporter PnuC;protein_id=WP_004097491.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5749001 5749750 . - . ID=gene-PHA56_RS27130;Name=PHA56_RS27130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS27130;old_locus_tag=PHA56_27130 NZ_CP116214.1 Protein Homology CDS 5749001 5749750 . - 0 ID=cds-WP_014227449.1;Parent=gene-PHA56_RS27130;Dbxref=Genbank:WP_014227449.1;Name=WP_014227449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014227449.1;locus_tag=PHA56_RS27130;product=nucleoside phosphorylase;protein_id=WP_014227449.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5749775 5750479 . - . ID=gene-PHA56_RS27135;Name=PHA56_RS27135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS27135;old_locus_tag=PHA56_27135 NZ_CP116214.1 Protein Homology CDS 5749775 5750479 . - 0 ID=cds-WP_004097483.1;Parent=gene-PHA56_RS27135;Dbxref=Genbank:WP_004097483.1;Name=WP_004097483.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004127355.1;locus_tag=PHA56_RS27135;product=Crp/Fnr family transcriptional regulator;protein_id=WP_004097483.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5750674 5750955 . + . ID=gene-PHA56_RS27140;Name=ppiC;gbkey=Gene;gene=ppiC;gene_biotype=protein_coding;locus_tag=PHA56_RS27140;old_locus_tag=PHA56_27140 NZ_CP116214.1 Protein Homology CDS 5750674 5750955 . + 0 ID=cds-WP_004127352.1;Parent=gene-PHA56_RS27140;Dbxref=Genbank:WP_004127352.1;Name=WP_004127352.1;gbkey=CDS;gene=ppiC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224422.1;locus_tag=PHA56_RS27140;product=peptidylprolyl isomerase PpiC;protein_id=WP_004127352.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5751008 5751289 . + . ID=gene-PHA56_RS27145;Name=ppiC;gbkey=Gene;gene=ppiC;gene_biotype=protein_coding;locus_tag=PHA56_RS27145;old_locus_tag=PHA56_27145 NZ_CP116214.1 Protein Homology CDS 5751008 5751289 . + 0 ID=cds-WP_004127351.1;Parent=gene-PHA56_RS27145;Dbxref=Genbank:WP_004127351.1;Name=WP_004127351.1;gbkey=CDS;gene=ppiC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224421.1;locus_tag=PHA56_RS27145;product=peptidylprolyl isomerase PpiC;protein_id=WP_004127351.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5751458 5752933 . - . ID=gene-PHA56_RS27150;Name=ilvC;gbkey=Gene;gene=ilvC;gene_biotype=protein_coding;locus_tag=PHA56_RS27150;old_locus_tag=PHA56_27150 NZ_CP116214.1 Protein Homology CDS 5751458 5752933 . - 0 ID=cds-WP_003018001.1;Parent=gene-PHA56_RS27150;Dbxref=Genbank:WP_003018001.1;Name=WP_003018001.1;Ontology_term=GO:0009082,GO:0004455;gbkey=CDS;gene=ilvC;go_function=ketol-acid reductoisomerase activity|0004455||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133363.1;locus_tag=PHA56_RS27150;product=ketol-acid reductoisomerase;protein_id=WP_003018001.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5753087 5753977 . + . ID=gene-PHA56_RS27155;Name=ilvY;gbkey=Gene;gene=ilvY;gene_biotype=protein_coding;locus_tag=PHA56_RS27155;old_locus_tag=PHA56_27155 NZ_CP116214.1 Protein Homology CDS 5753087 5753977 . + 0 ID=cds-WP_004097479.1;Parent=gene-PHA56_RS27155;Dbxref=Genbank:WP_004097479.1;Name=WP_004097479.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ilvY;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224419.1;locus_tag=PHA56_RS27155;product=HTH-type transcriptional activator IlvY;protein_id=WP_004097479.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5754034 5755578 . - . ID=gene-PHA56_RS27160;Name=ilvA;gbkey=Gene;gene=ilvA;gene_biotype=protein_coding;locus_tag=PHA56_RS27160;old_locus_tag=PHA56_27160 NZ_CP116214.1 Protein Homology CDS 5754034 5755578 . - 0 ID=cds-WP_014227448.1;Parent=gene-PHA56_RS27160;Dbxref=Genbank:WP_014227448.1;Name=WP_014227448.1;Ontology_term=GO:0009097,GO:0004794;gbkey=CDS;gene=ilvA;go_function=L-threonine ammonia-lyase activity|0004794||IEA;go_process=isoleucine biosynthetic process|0009097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312733.1;locus_tag=PHA56_RS27160;product=threonine ammonia-lyase%2C biosynthetic;protein_id=WP_014227448.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5755581 5757431 . - . ID=gene-PHA56_RS27165;Name=ilvD;gbkey=Gene;gene=ilvD;gene_biotype=protein_coding;locus_tag=PHA56_RS27165;old_locus_tag=PHA56_27165 NZ_CP116214.1 Protein Homology CDS 5755581 5757431 . - 0 ID=cds-WP_014227447.1;Parent=gene-PHA56_RS27165;Dbxref=Genbank:WP_014227447.1;Name=WP_014227447.1;Ontology_term=GO:0009082,GO:0004160;gbkey=CDS;gene=ilvD;go_function=dihydroxy-acid dehydratase activity|0004160||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133366.1;locus_tag=PHA56_RS27165;product=dihydroxy-acid dehydratase;protein_id=WP_014227447.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5757493 5758422 . - . ID=gene-PHA56_RS27170;Name=PHA56_RS27170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS27170;old_locus_tag=PHA56_27170 NZ_CP116214.1 Protein Homology CDS 5757493 5758422 . - 0 ID=cds-WP_014227446.1;Parent=gene-PHA56_RS27170;Dbxref=Genbank:WP_014227446.1;Name=WP_014227446.1;Ontology_term=GO:0009081,GO:0004084;gbkey=CDS;go_function=branched-chain-amino-acid transaminase activity|0004084||IEA;go_process=branched-chain amino acid metabolic process|0009081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462794.1;locus_tag=PHA56_RS27170;product=branched-chain amino acid transaminase;protein_id=WP_014227446.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5758439 5758696 . - . ID=gene-PHA56_RS27175;Name=ilvM;gbkey=Gene;gene=ilvM;gene_biotype=protein_coding;locus_tag=PHA56_RS27175;old_locus_tag=PHA56_27175 NZ_CP116214.1 Protein Homology CDS 5758439 5758696 . - 0 ID=cds-WP_004097471.1;Parent=gene-PHA56_RS27175;Dbxref=Genbank:WP_004097471.1;Name=WP_004097471.1;gbkey=CDS;gene=ilvM;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224415.1;locus_tag=PHA56_RS27175;product=acetolactate synthase 2 small subunit;protein_id=WP_004097471.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5758693 5760339 . - . ID=gene-PHA56_RS27180;Name=ilvG;gbkey=Gene;gene=ilvG;gene_biotype=protein_coding;locus_tag=PHA56_RS27180;old_locus_tag=PHA56_27180 NZ_CP116214.1 Protein Homology CDS 5758693 5760339 . - 0 ID=cds-WP_014227445.1;Parent=gene-PHA56_RS27180;Dbxref=Genbank:WP_014227445.1;Name=WP_014227445.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvG;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001012636.1;locus_tag=PHA56_RS27180;product=acetolactate synthase 2 catalytic subunit;protein_id=WP_014227445.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5760479 5760577 . - . ID=gene-PHA56_RS27185;Name=ilvL;gbkey=Gene;gene=ilvL;gene_biotype=protein_coding;locus_tag=PHA56_RS27185;old_locus_tag=PHA56_27185 NZ_CP116214.1 Protein Homology CDS 5760479 5760577 . - 0 ID=cds-WP_001311244.1;Parent=gene-PHA56_RS27185;Dbxref=Genbank:WP_001311244.1;Name=WP_001311244.1;gbkey=CDS;gene=ilvL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312728.1;locus_tag=PHA56_RS27185;product=ilv operon leader peptide;protein_id=WP_001311244.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5760928 5762448 . + . ID=gene-PHA56_RS27190;Name=PHA56_RS27190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS27190;old_locus_tag=PHA56_27190 NZ_CP116214.1 Protein Homology CDS 5760928 5762448 . + 0 ID=cds-WP_038423929.1;Parent=gene-PHA56_RS27190;Dbxref=Genbank:WP_038423929.1;Name=WP_038423929.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224412.1;locus_tag=PHA56_RS27190;product=YifB family Mg chelatase-like AAA ATPase;protein_id=WP_038423929.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5762472 5762810 . - . ID=gene-PHA56_RS27195;Name=PHA56_RS27195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS27195;old_locus_tag=PHA56_27195 NZ_CP116214.1 Protein Homology CDS 5762472 5762810 . - 0 ID=cds-WP_004097464.1;Parent=gene-PHA56_RS27195;Dbxref=Genbank:WP_004097464.1;Name=WP_004097464.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224411.1;locus_tag=PHA56_RS27195;product=DUF413 domain-containing protein;protein_id=WP_004097464.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5762929 5763750 . + . ID=gene-PHA56_RS27200;Name=hdfR;gbkey=Gene;gene=hdfR;gene_biotype=protein_coding;locus_tag=PHA56_RS27200;old_locus_tag=PHA56_27200 NZ_CP116214.1 Protein Homology CDS 5762929 5763750 . + 0 ID=cds-WP_004097454.1;Parent=gene-PHA56_RS27200;Dbxref=Genbank:WP_004097454.1;Name=WP_004097454.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=hdfR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004097454.1;locus_tag=PHA56_RS27200;product=HTH-type transcriptional regulator HdfR;protein_id=WP_004097454.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5763832 5763907 . - . ID=gene-PHA56_RS27205;Name=PHA56_RS27205;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA56_RS27205;old_locus_tag=PHA56_27205 NZ_CP116214.1 tRNAscan-SE tRNA 5763832 5763907 . - . ID=rna-PHA56_RS27205;Parent=gene-PHA56_RS27205;anticodon=(pos:complement(5763872..5763874));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS27205;product=tRNA-Trp NZ_CP116214.1 tRNAscan-SE exon 5763832 5763907 . - . ID=exon-PHA56_RS27205-1;Parent=rna-PHA56_RS27205;anticodon=(pos:complement(5763872..5763874));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS27205;product=tRNA-Trp NZ_CP116214.1 RefSeq gene 5763961 5764037 . - . ID=gene-PHA56_RS27210;Name=PHA56_RS27210;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA56_RS27210;old_locus_tag=PHA56_27210 NZ_CP116214.1 tRNAscan-SE tRNA 5763961 5764037 . - . ID=rna-PHA56_RS27210;Parent=gene-PHA56_RS27210;anticodon=(pos:complement(5764001..5764003));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS27210;product=tRNA-Asp NZ_CP116214.1 tRNAscan-SE exon 5763961 5764037 . - . ID=exon-PHA56_RS27210-1;Parent=rna-PHA56_RS27210;anticodon=(pos:complement(5764001..5764003));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS27210;product=tRNA-Asp NZ_CP116214.1 RefSeq gene 5764093 5764208 . - . ID=gene-PHA56_RS27215;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=PHA56_RS27215;old_locus_tag=PHA56_27215 NZ_CP116214.1 cmsearch rRNA 5764093 5764208 . - . ID=rna-PHA56_RS27215;Parent=gene-PHA56_RS27215;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA56_RS27215;product=5S ribosomal RNA NZ_CP116214.1 cmsearch exon 5764093 5764208 . - . ID=exon-PHA56_RS27215-1;Parent=rna-PHA56_RS27215;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA56_RS27215;product=5S ribosomal RNA NZ_CP116214.1 RefSeq gene 5764403 5767308 . - . ID=gene-PHA56_RS27220;Name=PHA56_RS27220;gbkey=Gene;gene_biotype=rRNA;locus_tag=PHA56_RS27220;old_locus_tag=PHA56_27220 NZ_CP116214.1 cmsearch rRNA 5764403 5767308 . - . ID=rna-PHA56_RS27220;Parent=gene-PHA56_RS27220;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA56_RS27220;product=23S ribosomal RNA NZ_CP116214.1 cmsearch exon 5764403 5767308 . - . ID=exon-PHA56_RS27220-1;Parent=rna-PHA56_RS27220;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA56_RS27220;product=23S ribosomal RNA NZ_CP116214.1 RefSeq gene 5767487 5767562 . - . ID=gene-PHA56_RS27225;Name=PHA56_RS27225;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA56_RS27225;old_locus_tag=PHA56_27225 NZ_CP116214.1 tRNAscan-SE tRNA 5767487 5767562 . - . ID=rna-PHA56_RS27225;Parent=gene-PHA56_RS27225;anticodon=(pos:complement(5767527..5767529));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS27225;product=tRNA-Ala NZ_CP116214.1 tRNAscan-SE exon 5767487 5767562 . - . ID=exon-PHA56_RS27225-1;Parent=rna-PHA56_RS27225;anticodon=(pos:complement(5767527..5767529));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS27225;product=tRNA-Ala NZ_CP116214.1 RefSeq gene 5767670 5767746 . - . ID=gene-PHA56_RS27230;Name=PHA56_RS27230;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA56_RS27230;old_locus_tag=PHA56_27230 NZ_CP116214.1 tRNAscan-SE tRNA 5767670 5767746 . - . ID=rna-PHA56_RS27230;Parent=gene-PHA56_RS27230;anticodon=(pos:complement(5767710..5767712));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS27230;product=tRNA-Ile NZ_CP116214.1 tRNAscan-SE exon 5767670 5767746 . - . ID=exon-PHA56_RS27230-1;Parent=rna-PHA56_RS27230;anticodon=(pos:complement(5767710..5767712));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA56_RS27230;product=tRNA-Ile NZ_CP116214.1 RefSeq gene 5767818 5769357 . - . ID=gene-PHA56_RS27235;Name=PHA56_RS27235;gbkey=Gene;gene_biotype=rRNA;locus_tag=PHA56_RS27235;old_locus_tag=PHA56_27235 NZ_CP116214.1 cmsearch rRNA 5767818 5769357 . - . ID=rna-PHA56_RS27235;Parent=gene-PHA56_RS27235;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA56_RS27235;product=16S ribosomal RNA NZ_CP116214.1 cmsearch exon 5767818 5769357 . - . ID=exon-PHA56_RS27235-1;Parent=rna-PHA56_RS27235;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA56_RS27235;product=16S ribosomal RNA NZ_CP116214.1 RefSeq gene 5769734 5770588 . - . ID=gene-PHA56_RS27240;Name=murI;gbkey=Gene;gene=murI;gene_biotype=protein_coding;locus_tag=PHA56_RS27240;old_locus_tag=PHA56_27240 NZ_CP116214.1 Protein Homology CDS 5769734 5770588 . - 0 ID=cds-WP_004856053.1;Parent=gene-PHA56_RS27240;Dbxref=Genbank:WP_004856053.1;Name=WP_004856053.1;Ontology_term=GO:0006807,GO:0008881;gbkey=CDS;gene=murI;go_function=glutamate racemase activity|0008881||IEA;go_process=nitrogen compound metabolic process|0006807||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004127341.1;locus_tag=PHA56_RS27240;product=glutamate racemase;protein_id=WP_004856053.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5770533 5772401 . - . ID=gene-PHA56_RS27245;Name=btuB;gbkey=Gene;gene=btuB;gene_biotype=protein_coding;locus_tag=PHA56_RS27245;old_locus_tag=PHA56_27245 NZ_CP116214.1 Protein Homology CDS 5770533 5772401 . - 0 ID=cds-WP_004856052.1;Parent=gene-PHA56_RS27245;Dbxref=Genbank:WP_004856052.1;Name=WP_004856052.1;Ontology_term=GO:0015889,GO:0015420;gbkey=CDS;gene=btuB;go_function=ABC-type vitamin B12 transporter activity|0015420||IEA;go_process=cobalamin transport|0015889||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002883025.1;locus_tag=PHA56_RS27245;product=TonB-dependent vitamin B12 receptor BtuB;protein_id=WP_004856052.1;transl_table=11 NZ_CP116214.1 cmsearch riboswitch 5772467 5772649 . - . ID=id-NZ_CP116214.1:5772467..5772649;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NZ_CP116214.1 RefSeq gene 5772766 5773866 . + . ID=gene-PHA56_RS27250;Name=trmA;gbkey=Gene;gene=trmA;gene_biotype=protein_coding;locus_tag=PHA56_RS27250;old_locus_tag=PHA56_27250 NZ_CP116214.1 Protein Homology CDS 5772766 5773866 . + 0 ID=cds-WP_076752444.1;Parent=gene-PHA56_RS27250;Dbxref=Genbank:WP_076752444.1;Name=WP_076752444.1;Ontology_term=GO:0006400,GO:0030697;gbkey=CDS;gene=trmA;go_function=S-adenosylmethionine-dependent tRNA (m5U54) methyltransferase activity|0030697||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418400.1;locus_tag=PHA56_RS27250;product=tRNA (uridine(54)-C5)-methyltransferase TrmA;protein_id=WP_076752444.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5773913 5774272 . - . ID=gene-PHA56_RS27255;Name=PHA56_RS27255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS27255;old_locus_tag=PHA56_27255 NZ_CP116214.1 Protein Homology CDS 5773913 5774272 . - 0 ID=cds-WP_004856046.1;Parent=gene-PHA56_RS27255;Dbxref=Genbank:WP_004856046.1;Name=WP_004856046.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224406.1;locus_tag=PHA56_RS27255;product=YijD family membrane protein;protein_id=WP_004856046.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5774288 5774923 . - . ID=gene-PHA56_RS27260;Name=fabR;gbkey=Gene;gene=fabR;gene_biotype=protein_coding;locus_tag=PHA56_RS27260;old_locus_tag=PHA56_27260 NZ_CP116214.1 Protein Homology CDS 5774288 5774923 . - 0 ID=cds-WP_076752443.1;Parent=gene-PHA56_RS27260;Dbxref=Genbank:WP_076752443.1;Name=WP_076752443.1;Ontology_term=GO:0003677;gbkey=CDS;gene=fabR;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224405.1;locus_tag=PHA56_RS27260;product=HTH-type transcriptional repressor FabR;protein_id=WP_076752443.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5775120 5776520 . + . ID=gene-PHA56_RS27265;Name=sthA;gbkey=Gene;gene=sthA;gene_biotype=protein_coding;locus_tag=PHA56_RS27265;old_locus_tag=PHA56_27265 NZ_CP116214.1 Protein Homology CDS 5775120 5776520 . + 0 ID=cds-WP_004116922.1;Parent=gene-PHA56_RS27265;Dbxref=Genbank:WP_004116922.1;Name=WP_004116922.1;Ontology_term=GO:0045454,GO:0003957,GO:0050660;gbkey=CDS;gene=sthA;go_function=NAD(P)+ transhydrogenase (B-specific) activity|0003957||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463005.1;locus_tag=PHA56_RS27265;product=Si-specific NAD(P)(+) transhydrogenase;protein_id=WP_004116922.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5776503 5777420 . - . ID=gene-PHA56_RS27270;Name=oxyR;gbkey=Gene;gene=oxyR;gene_biotype=protein_coding;locus_tag=PHA56_RS27270;old_locus_tag=PHA56_27270 NZ_CP116214.1 Protein Homology CDS 5776503 5777420 . - 0 ID=cds-WP_014227441.1;Parent=gene-PHA56_RS27270;Dbxref=Genbank:WP_014227441.1;Name=WP_014227441.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=oxyR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016831323.1;locus_tag=PHA56_RS27270;product=DNA-binding transcriptional regulator OxyR;protein_id=WP_014227441.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5777688 5779061 . - . ID=gene-PHA56_RS27275;Name=argH;gbkey=Gene;gene=argH;gene_biotype=protein_coding;locus_tag=PHA56_RS27275;old_locus_tag=PHA56_27275 NZ_CP116214.1 Protein Homology CDS 5777688 5779061 . - 0 ID=cds-WP_014227439.1;Parent=gene-PHA56_RS27275;Dbxref=Genbank:WP_014227439.1;Name=WP_014227439.1;Ontology_term=GO:0042450,GO:0004056;gbkey=CDS;gene=argH;go_function=argininosuccinate lyase activity|0004056||IEA;go_process=arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006179193.1;locus_tag=PHA56_RS27275;product=argininosuccinate lyase;protein_id=WP_014227439.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5779139 5779915 . - . ID=gene-PHA56_RS27280;Name=argB;gbkey=Gene;gene=argB;gene_biotype=protein_coding;locus_tag=PHA56_RS27280;old_locus_tag=PHA56_27280 NZ_CP116214.1 Protein Homology CDS 5779139 5779915 . - 0 ID=cds-WP_088941751.1;Parent=gene-PHA56_RS27280;Dbxref=Genbank:WP_088941751.1;Name=WP_088941751.1;Ontology_term=GO:0006592,GO:0003991;gbkey=CDS;gene=argB;go_function=acetylglutamate kinase activity|0003991||IEA;go_process=ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418394.3;locus_tag=PHA56_RS27280;product=acetylglutamate kinase;protein_id=WP_088941751.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5779922 5780926 . - . ID=gene-PHA56_RS27285;Name=argC;gbkey=Gene;gene=argC;gene_biotype=protein_coding;locus_tag=PHA56_RS27285;old_locus_tag=PHA56_27285 NZ_CP116214.1 Protein Homology CDS 5779922 5780926 . - 0 ID=cds-WP_032693276.1;Parent=gene-PHA56_RS27285;Dbxref=Genbank:WP_032693276.1;Name=WP_032693276.1;Ontology_term=GO:0006592,GO:0003942;gbkey=CDS;gene=argC;go_function=N-acetyl-gamma-glutamyl-phosphate reductase activity|0003942||IEA;go_process=ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122770.1;locus_tag=PHA56_RS27285;product=N-acetyl-gamma-glutamyl-phosphate reductase;protein_id=WP_032693276.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5781111 5782262 . + . ID=gene-PHA56_RS27290;Name=argE;gbkey=Gene;gene=argE;gene_biotype=protein_coding;locus_tag=PHA56_RS27290;old_locus_tag=PHA56_27290 NZ_CP116214.1 Protein Homology CDS 5781111 5782262 . + 0 ID=cds-WP_076752442.1;Parent=gene-PHA56_RS27290;Dbxref=Genbank:WP_076752442.1;Name=WP_076752442.1;Ontology_term=GO:0006526,GO:0019213;gbkey=CDS;gene=argE;go_function=deacetylase activity|0019213||IEA;go_process=arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224399.1;locus_tag=PHA56_RS27290;product=acetylornithine deacetylase;protein_id=WP_076752442.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5782517 5785168 . + . ID=gene-PHA56_RS27295;Name=ppc;gbkey=Gene;gene=ppc;gene_biotype=protein_coding;locus_tag=PHA56_RS27295;old_locus_tag=PHA56_27295 NZ_CP116214.1 Protein Homology CDS 5782517 5785168 . + 0 ID=cds-WP_004856030.1;Parent=gene-PHA56_RS27295;Dbxref=Genbank:WP_004856030.1;Name=WP_004856030.1;Ontology_term=GO:0006099,GO:0015977,GO:0008964;gbkey=CDS;gene=ppc;go_function=phosphoenolpyruvate carboxylase activity|0008964||IEA;go_process=tricarboxylic acid cycle|0006099||IEA,carbon fixation|0015977||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004203687.1;locus_tag=PHA56_RS27295;product=phosphoenolpyruvate carboxylase;protein_id=WP_004856030.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5785264 5785911 . - . ID=gene-PHA56_RS27300;Name=zinT;gbkey=Gene;gene=zinT;gene_biotype=protein_coding;locus_tag=PHA56_RS27300;old_locus_tag=PHA56_27300 NZ_CP116214.1 Protein Homology CDS 5785264 5785911 . - 0 ID=cds-WP_014227435.1;Parent=gene-PHA56_RS27300;Dbxref=Genbank:WP_014227435.1;Name=WP_014227435.1;Ontology_term=GO:0008270;gbkey=CDS;gene=zinT;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224397.1;locus_tag=PHA56_RS27300;product=metal-binding protein ZinT;protein_id=WP_014227435.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5786063 5786926 . + . ID=gene-PHA56_RS27305;Name=PHA56_RS27305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS27305;old_locus_tag=PHA56_27305 NZ_CP116214.1 Protein Homology CDS 5786063 5786926 . + 0 ID=cds-WP_076752441.1;Parent=gene-PHA56_RS27305;Dbxref=Genbank:WP_076752441.1;Name=WP_076752441.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002882984.1;locus_tag=PHA56_RS27305;product=AraC family transcriptional regulator;protein_id=WP_076752441.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5787132 5787794 . + . ID=gene-PHA56_RS27310;Name=fsa;gbkey=Gene;gene=fsa;gene_biotype=protein_coding;locus_tag=PHA56_RS27310;old_locus_tag=PHA56_27310 NZ_CP116214.1 Protein Homology CDS 5787132 5787794 . + 0 ID=cds-WP_004107558.1;Parent=gene-PHA56_RS27310;Dbxref=Genbank:WP_004107558.1;Name=WP_004107558.1;Ontology_term=GO:0016832;gbkey=CDS;gene=fsa;go_function=aldehyde-lyase activity|0016832||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224395.1;locus_tag=PHA56_RS27310;product=fructose-6-phosphate aldolase;protein_id=WP_004107558.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5787850 5788953 . + . ID=gene-PHA56_RS27315;Name=PHA56_RS27315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS27315;old_locus_tag=PHA56_27315 NZ_CP116214.1 Protein Homology CDS 5787850 5788953 . + 0 ID=cds-WP_014227433.1;Parent=gene-PHA56_RS27315;Dbxref=Genbank:WP_014227433.1;Name=WP_014227433.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224394.1;locus_tag=PHA56_RS27315;product=glycerol dehydrogenase;protein_id=WP_014227433.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5789061 5789831 . + . ID=gene-PHA56_RS27320;Name=PHA56_RS27320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS27320;old_locus_tag=PHA56_27320 NZ_CP116214.1 Protein Homology CDS 5789061 5789831 . + 0 ID=cds-WP_223226797.1;Parent=gene-PHA56_RS27320;Dbxref=Genbank:WP_223226797.1;Name=WP_223226797.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013368238.1;locus_tag=PHA56_RS27320;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_223226797.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5789954 5790841 . - . ID=gene-PHA56_RS27325;Name=metF;gbkey=Gene;gene=metF;gene_biotype=protein_coding;locus_tag=PHA56_RS27325;old_locus_tag=PHA56_27325 NZ_CP116214.1 Protein Homology CDS 5789954 5790841 . - 0 ID=cds-WP_004856019.1;Parent=gene-PHA56_RS27325;Dbxref=Genbank:WP_004856019.1;Name=WP_004856019.1;Ontology_term=GO:0009086,GO:0004489;gbkey=CDS;gene=metF;go_function=methylenetetrahydrofolate reductase (NAD(P)H) activity|0004489||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224392.1;locus_tag=PHA56_RS27325;product=methylenetetrahydrofolate reductase;protein_id=WP_004856019.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5791008 5791913 . - . ID=gene-PHA56_RS27330;Name=PHA56_RS27330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS27330;old_locus_tag=PHA56_27330 NZ_CP116214.1 Protein Homology CDS 5791008 5791913 . - 0 ID=cds-WP_271292943.1;Parent=gene-PHA56_RS27330;Dbxref=Genbank:WP_271292943.1;Name=WP_271292943.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017145151.1;locus_tag=PHA56_RS27330;product=LysR family transcriptional regulator;protein_id=WP_271292943.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5792004 5792375 . + . ID=gene-PHA56_RS27335;Name=PHA56_RS27335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS27335;old_locus_tag=PHA56_27335 NZ_CP116214.1 Protein Homology CDS 5792004 5792375 . + 0 ID=cds-WP_004856015.1;Parent=gene-PHA56_RS27335;Dbxref=Genbank:WP_004856015.1;Name=WP_004856015.1;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224390.1;locus_tag=PHA56_RS27335;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_004856015.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5792415 5794847 . - . ID=gene-PHA56_RS27340;Name=PHA56_RS27340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS27340;old_locus_tag=PHA56_27340 NZ_CP116214.1 Protein Homology CDS 5792415 5794847 . - 0 ID=cds-WP_014227430.1;Parent=gene-PHA56_RS27340;Dbxref=Genbank:WP_014227430.1;Name=WP_014227430.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000110794.1;locus_tag=PHA56_RS27340;product=bifunctional aspartate kinase/homoserine dehydrogenase II;protein_id=WP_014227430.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5794850 5796010 . - . ID=gene-PHA56_RS27345;Name=metB;gbkey=Gene;gene=metB;gene_biotype=protein_coding;locus_tag=PHA56_RS27345;old_locus_tag=PHA56_27345 NZ_CP116214.1 Protein Homology CDS 5794850 5796010 . - 0 ID=cds-WP_014227429.1;Parent=gene-PHA56_RS27345;Dbxref=Genbank:WP_014227429.1;Name=WP_014227429.1;Ontology_term=GO:0019346,GO:0003824,GO:0030170;gbkey=CDS;gene=metB;go_function=catalytic activity|0003824||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224386.1;locus_tag=PHA56_RS27345;product=cystathionine gamma-synthase;protein_id=WP_014227429.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5796277 5796594 . + . ID=gene-PHA56_RS27350;Name=metJ;gbkey=Gene;gene=metJ;gene_biotype=protein_coding;locus_tag=PHA56_RS27350;old_locus_tag=PHA56_27350 NZ_CP116214.1 Protein Homology CDS 5796277 5796594 . + 0 ID=cds-WP_004107547.1;Parent=gene-PHA56_RS27350;Dbxref=Genbank:WP_004107547.1;Name=WP_004107547.1;gbkey=CDS;gene=metJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015855437.1;locus_tag=PHA56_RS27350;product=met regulon transcriptional regulator MetJ;protein_id=WP_004107547.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5796692 5796907 . - . ID=gene-PHA56_RS27355;Name=rpmE;gbkey=Gene;gene=rpmE;gene_biotype=protein_coding;locus_tag=PHA56_RS27355;old_locus_tag=PHA56_27355 NZ_CP116214.1 Protein Homology CDS 5796692 5796907 . - 0 ID=cds-WP_004107543.1;Parent=gene-PHA56_RS27355;Dbxref=Genbank:WP_004107543.1;Name=WP_004107543.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010847674.1;locus_tag=PHA56_RS27355;product=50S ribosomal protein L31;protein_id=WP_004107543.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5797138 5799333 . + . ID=gene-PHA56_RS27360;Name=priA;gbkey=Gene;gene=priA;gene_biotype=protein_coding;locus_tag=PHA56_RS27360;old_locus_tag=PHA56_27360 NZ_CP116214.1 Protein Homology CDS 5797138 5799333 . + 0 ID=cds-WP_042944059.1;Parent=gene-PHA56_RS27360;Dbxref=Genbank:WP_042944059.1;Name=WP_042944059.1;gbkey=CDS;gene=priA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224383.1;locus_tag=PHA56_RS27360;product=primosomal protein N';protein_id=WP_042944059.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5799484 5800512 . + . ID=gene-PHA56_RS27365;Name=cytR;gbkey=Gene;gene=cytR;gene_biotype=protein_coding;locus_tag=PHA56_RS27365;old_locus_tag=PHA56_27365 NZ_CP116214.1 Protein Homology CDS 5799484 5800512 . + 0 ID=cds-WP_004856005.1;Parent=gene-PHA56_RS27365;Dbxref=Genbank:WP_004856005.1;Name=WP_004856005.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=cytR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004127258.1;locus_tag=PHA56_RS27365;product=DNA-binding transcriptional regulator CytR;protein_id=WP_004856005.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5800604 5801569 . + . ID=gene-PHA56_RS27370;Name=ftsN;gbkey=Gene;gene=ftsN;gene_biotype=protein_coding;locus_tag=PHA56_RS27370;old_locus_tag=PHA56_27370 NZ_CP116214.1 Protein Homology CDS 5800604 5801569 . + 0 ID=cds-WP_071889412.1;Parent=gene-PHA56_RS27370;Dbxref=Genbank:WP_071889412.1;Name=WP_071889412.1;Ontology_term=GO:0042834;gbkey=CDS;gene=ftsN;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002882919.1;locus_tag=PHA56_RS27370;product=cell division protein FtsN;protein_id=WP_071889412.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5801660 5802190 . + . ID=gene-PHA56_RS27375;Name=hslV;gbkey=Gene;gene=hslV;gene_biotype=protein_coding;locus_tag=PHA56_RS27375;old_locus_tag=PHA56_27375 NZ_CP116214.1 Protein Homology CDS 5801660 5802190 . + 0 ID=cds-WP_004107530.1;Parent=gene-PHA56_RS27375;Dbxref=Genbank:WP_004107530.1;Name=WP_004107530.1;Ontology_term=GO:0051603,GO:0004298;gbkey=CDS;gene=hslV;go_function=threonine-type endopeptidase activity|0004298||IEA;go_process=proteolysis involved in protein catabolic process|0051603||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224379.1;locus_tag=PHA56_RS27375;product=ATP-dependent protease subunit HslV;protein_id=WP_004107530.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5802200 5803534 . + . ID=gene-PHA56_RS27380;Name=hslU;gbkey=Gene;gene=hslU;gene_biotype=protein_coding;locus_tag=PHA56_RS27380;old_locus_tag=PHA56_27380 NZ_CP116214.1 Protein Homology CDS 5802200 5803534 . + 0 ID=cds-WP_004127247.1;Parent=gene-PHA56_RS27380;Dbxref=Genbank:WP_004127247.1;Name=WP_004127247.1;Ontology_term=GO:0006508,GO:0004176,GO:0005524;gbkey=CDS;gene=hslU;go_function=ATP-dependent peptidase activity|0004176||IEA,ATP binding|0005524||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019841241.1;locus_tag=PHA56_RS27380;product=HslU--HslV peptidase ATPase subunit;protein_id=WP_004127247.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5803919 5804845 . + . ID=gene-PHA56_RS27385;Name=menA;gbkey=Gene;gene=menA;gene_biotype=protein_coding;locus_tag=PHA56_RS27385;old_locus_tag=PHA56_27385 NZ_CP116214.1 Protein Homology CDS 5803919 5804845 . + 0 ID=cds-WP_032693284.1;Parent=gene-PHA56_RS27385;Dbxref=Genbank:WP_032693284.1;Name=WP_032693284.1;gbkey=CDS;gene=menA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004855999.1;locus_tag=PHA56_RS27385;product=1%2C4-dihydroxy-2-naphthoate polyprenyltransferase;protein_id=WP_032693284.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5804938 5805423 . + . ID=gene-PHA56_RS27390;Name=rraA;gbkey=Gene;gene=rraA;gene_biotype=protein_coding;locus_tag=PHA56_RS27390;old_locus_tag=PHA56_27390 NZ_CP116214.1 Protein Homology CDS 5804938 5805423 . + 0 ID=cds-WP_004127241.1;Parent=gene-PHA56_RS27390;Dbxref=Genbank:WP_004127241.1;Name=WP_004127241.1;Ontology_term=GO:0051252,GO:0008428;gbkey=CDS;gene=rraA;go_function=ribonuclease inhibitor activity|0008428||IEA;go_process=regulation of RNA metabolic process|0051252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001392924.1;locus_tag=PHA56_RS27390;product=ribonuclease E activity regulator RraA;protein_id=WP_004127241.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5805483 5806445 . - . ID=gene-PHA56_RS27395;Name=pfkA;gbkey=Gene;gene=pfkA;gene_biotype=protein_coding;locus_tag=PHA56_RS27395;old_locus_tag=PHA56_27395 NZ_CP116214.1 Protein Homology CDS 5805483 5806445 . - 0 ID=cds-WP_004127238.1;Parent=gene-PHA56_RS27395;Dbxref=Genbank:WP_004127238.1;Name=WP_004127238.1;Ontology_term=GO:0006096;gbkey=CDS;gene=pfkA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014072359.1;locus_tag=PHA56_RS27395;product=6-phosphofructokinase;protein_id=WP_004127238.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5806648 5807544 . - . ID=gene-PHA56_RS27400;Name=fieF;gbkey=Gene;gene=fieF;gene_biotype=protein_coding;locus_tag=PHA56_RS27400;old_locus_tag=PHA56_27400 NZ_CP116214.1 Protein Homology CDS 5806648 5807544 . - 0 ID=cds-WP_014227425.1;Parent=gene-PHA56_RS27400;Dbxref=Genbank:WP_014227425.1;Name=WP_014227425.1;Note=FieF%2C a metal efflux transporter%2C is a member of the CDF (cation diffusion facilitator) family of transporters.;Ontology_term=GO:0006812,GO:0055085,GO:0008324,GO:0016020;gbkey=CDS;gene=fieF;go_component=membrane|0016020||IEA;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=monoatomic cation transport|0006812||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004107519.1;locus_tag=PHA56_RS27400;product=CDF family cation-efflux transporter FieF;protein_id=WP_014227425.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5807694 5808197 . - . ID=gene-PHA56_RS27405;Name=cpxP;gbkey=Gene;gene=cpxP;gene_biotype=protein_coding;locus_tag=PHA56_RS27405;old_locus_tag=PHA56_27405 NZ_CP116214.1 Protein Homology CDS 5807694 5808197 . - 0 ID=cds-WP_004855993.1;Parent=gene-PHA56_RS27405;Dbxref=Genbank:WP_004855993.1;Name=WP_004855993.1;gbkey=CDS;gene=cpxP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224373.1;locus_tag=PHA56_RS27405;product=cell-envelope stress modulator CpxP;protein_id=WP_004855993.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5808347 5809045 . + . ID=gene-PHA56_RS27410;Name=cpxR;gbkey=Gene;gene=cpxR;gene_biotype=protein_coding;locus_tag=PHA56_RS27410;old_locus_tag=PHA56_27410 NZ_CP116214.1 Protein Homology CDS 5808347 5809045 . + 0 ID=cds-WP_004127228.1;Parent=gene-PHA56_RS27410;Dbxref=Genbank:WP_004127228.1;Name=WP_004127228.1;gbkey=CDS;gene=cpxR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001033718.1;locus_tag=PHA56_RS27410;product=envelope stress response regulator transcription factor CpxR;protein_id=WP_004127228.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5809042 5810415 . + . ID=gene-PHA56_RS27415;Name=cpxA;gbkey=Gene;gene=cpxA;gene_biotype=protein_coding;locus_tag=PHA56_RS27415;old_locus_tag=PHA56_27415 NZ_CP116214.1 Protein Homology CDS 5809042 5810415 . + 0 ID=cds-WP_004107505.1;Parent=gene-PHA56_RS27415;Dbxref=Genbank:WP_004107505.1;Name=WP_004107505.1;Ontology_term=GO:0007165,GO:0000155;gbkey=CDS;gene=cpxA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462939.1;locus_tag=PHA56_RS27415;product=envelope stress sensor histidine kinase CpxA;protein_id=WP_004107505.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5810507 5811181 . - . ID=gene-PHA56_RS27420;Name=yiiM;gbkey=Gene;gene=yiiM;gene_biotype=protein_coding;locus_tag=PHA56_RS27420;old_locus_tag=PHA56_27420 NZ_CP116214.1 Protein Homology CDS 5810507 5811181 . - 0 ID=cds-WP_014227423.1;Parent=gene-PHA56_RS27420;Dbxref=Genbank:WP_014227423.1;Name=WP_014227423.1;Ontology_term=GO:0003824,GO:0030151,GO:0030170;gbkey=CDS;gene=yiiM;go_function=catalytic activity|0003824||IEA,molybdenum ion binding|0030151||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224370.1;locus_tag=PHA56_RS27420;product=6-hydroxyaminopurine reductase;protein_id=WP_014227423.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5811253 5811873 . - . ID=gene-PHA56_RS27425;Name=sodA;gbkey=Gene;gene=sodA;gene_biotype=protein_coding;locus_tag=PHA56_RS27425;old_locus_tag=PHA56_27425 NZ_CP116214.1 Protein Homology CDS 5811253 5811873 . - 0 ID=cds-WP_004127220.1;Parent=gene-PHA56_RS27425;Dbxref=Genbank:WP_004127220.1;Name=WP_004127220.1;Ontology_term=GO:0006801,GO:0004784;gbkey=CDS;gene=sodA;go_function=superoxide dismutase activity|0004784||IEA;go_process=superoxide metabolic process|0006801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010345169.1;locus_tag=PHA56_RS27425;product=superoxide dismutase [Mn];protein_id=WP_004127220.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5812165 5813199 . + . ID=gene-PHA56_RS27430;Name=rhaT;gbkey=Gene;gene=rhaT;gene_biotype=protein_coding;locus_tag=PHA56_RS27430;old_locus_tag=PHA56_27430 NZ_CP116214.1 Protein Homology CDS 5812165 5813199 . + 0 ID=cds-WP_004107493.1;Parent=gene-PHA56_RS27430;Dbxref=Genbank:WP_004107493.1;Name=WP_004107493.1;Ontology_term=GO:0008645,GO:0015153;gbkey=CDS;gene=rhaT;go_function=rhamnose transmembrane transporter activity|0015153||IEA;go_process=hexose transmembrane transport|0008645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224368.1;locus_tag=PHA56_RS27430;product=L-rhamnose/proton symporter RhaT;protein_id=WP_004107493.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5813205 5814053 . - . ID=gene-PHA56_RS27435;Name=rhaR;gbkey=Gene;gene=rhaR;gene_biotype=protein_coding;locus_tag=PHA56_RS27435;old_locus_tag=PHA56_27435 NZ_CP116214.1 Protein Homology CDS 5813205 5814053 . - 0 ID=cds-WP_038423921.1;Parent=gene-PHA56_RS27435;Dbxref=Genbank:WP_038423921.1;Name=WP_038423921.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=rhaR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224367.1;locus_tag=PHA56_RS27435;product=HTH-type transcriptional activator RhaR;protein_id=WP_038423921.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5814127 5814963 . - . ID=gene-PHA56_RS27440;Name=rhaS;gbkey=Gene;gene=rhaS;gene_biotype=protein_coding;locus_tag=PHA56_RS27440;old_locus_tag=PHA56_27440 NZ_CP116214.1 Protein Homology CDS 5814127 5814963 . - 0 ID=cds-WP_014227422.1;Parent=gene-PHA56_RS27440;Dbxref=Genbank:WP_014227422.1;Name=WP_014227422.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=rhaS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224366.1;locus_tag=PHA56_RS27440;product=HTH-type transcriptional activator RhaS;protein_id=WP_014227422.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5815275 5816741 . + . ID=gene-PHA56_RS27445;Name=rhaB;gbkey=Gene;gene=rhaB;gene_biotype=protein_coding;locus_tag=PHA56_RS27445;old_locus_tag=PHA56_27445 NZ_CP116214.1 Protein Homology CDS 5815275 5816741 . + 0 ID=cds-WP_119834595.1;Parent=gene-PHA56_RS27445;Dbxref=Genbank:WP_119834595.1;Name=WP_119834595.1;Ontology_term=GO:0005975,GO:0019301,GO:0008993;gbkey=CDS;gene=rhaB;go_function=rhamnulokinase activity|0008993||IEA;go_process=carbohydrate metabolic process|0005975||IEA,rhamnose catabolic process|0019301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224365.1;locus_tag=PHA56_RS27445;product=rhamnulokinase;protein_id=WP_119834595.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5816738 5817997 . + . ID=gene-PHA56_RS27450;Name=rhaA;gbkey=Gene;gene=rhaA;gene_biotype=protein_coding;locus_tag=PHA56_RS27450;old_locus_tag=PHA56_27450 NZ_CP116214.1 Protein Homology CDS 5816738 5817997 . + 0 ID=cds-WP_014837041.1;Parent=gene-PHA56_RS27450;Dbxref=Genbank:WP_014837041.1;Name=WP_014837041.1;Ontology_term=GO:0019301,GO:0008740;gbkey=CDS;gene=rhaA;go_function=L-rhamnose isomerase activity|0008740||IEA;go_process=rhamnose catabolic process|0019301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224364.1;locus_tag=PHA56_RS27450;product=L-rhamnose isomerase;protein_id=WP_014837041.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5818135 5818965 . + . ID=gene-PHA56_RS27455;Name=rhaD;gbkey=Gene;gene=rhaD;gene_biotype=protein_coding;locus_tag=PHA56_RS27455;old_locus_tag=PHA56_27455 NZ_CP116214.1 Protein Homology CDS 5818135 5818965 . + 0 ID=cds-WP_014227419.1;Parent=gene-PHA56_RS27455;Dbxref=Genbank:WP_014227419.1;Name=WP_014227419.1;gbkey=CDS;gene=rhaD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224363.1;locus_tag=PHA56_RS27455;product=rhamnulose-1-phosphate aldolase;protein_id=WP_014227419.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5819047 5820033 . + . ID=gene-PHA56_RS27460;Name=rhaS;gbkey=Gene;gene=rhaS;gene_biotype=protein_coding;locus_tag=PHA56_RS27460;old_locus_tag=PHA56_27460 NZ_CP116214.1 Protein Homology CDS 5819047 5820033 . + 0 ID=cds-WP_038423920.1;Parent=gene-PHA56_RS27460;Dbxref=Genbank:WP_038423920.1;Name=WP_038423920.1;Ontology_term=GO:0015762,GO:0015153,GO:0033296,GO:0009897,GO:0030288,GO:0055052;gbkey=CDS;gene=rhaS;go_component=external side of plasma membrane|0009897||IEA,outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=rhamnose transmembrane transporter activity|0015153||IEA,rhamnose binding|0033296||IEA;go_process=rhamnose transmembrane transport|0015762||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224362.1;locus_tag=PHA56_RS27460;product=rhamnose ABC transporter substrate-binding protein;protein_id=WP_038423920.1;transl_table=11 NZ_CP116214.1 RefSeq pseudogene 5820178 5821690 . + . ID=gene-PHA56_RS27465;Name=PHA56_RS27465;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS27465;old_locus_tag=PHA56_27465;pseudo=true NZ_CP116214.1 Protein Homology CDS 5820178 5821690 . + 0 ID=cds-PHA56_RS27465;Parent=gene-PHA56_RS27465;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224361.1;locus_tag=PHA56_RS27465;product=sugar ABC transporter ATP-binding protein;pseudo=true;transl_table=11 NZ_CP116214.1 RefSeq gene 5821690 5822694 . + . ID=gene-PHA56_RS27470;Name=PHA56_RS27470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS27470;old_locus_tag=PHA56_27470 NZ_CP116214.1 Protein Homology CDS 5821690 5822694 . + 0 ID=cds-WP_014837037.1;Parent=gene-PHA56_RS27470;Dbxref=Genbank:WP_014837037.1;Name=WP_014837037.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004203659.1;locus_tag=PHA56_RS27470;product=ABC transporter permease;protein_id=WP_014837037.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5822691 5823695 . + . ID=gene-PHA56_RS27475;Name=PHA56_RS27475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS27475;old_locus_tag=PHA56_27475 NZ_CP116214.1 Protein Homology CDS 5822691 5823695 . + 0 ID=cds-WP_014227415.1;Parent=gene-PHA56_RS27475;Dbxref=Genbank:WP_014227415.1;Name=WP_014227415.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014227415.1;locus_tag=PHA56_RS27475;product=ABC transporter permease;protein_id=WP_014227415.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5823811 5824959 . + . ID=gene-PHA56_RS27480;Name=fucO;gbkey=Gene;gene=fucO;gene_biotype=protein_coding;locus_tag=PHA56_RS27480;old_locus_tag=PHA56_27480 NZ_CP116214.1 Protein Homology CDS 5823811 5824959 . + 0 ID=cds-WP_014837036.1;Parent=gene-PHA56_RS27480;Dbxref=Genbank:WP_014837036.1;Name=WP_014837036.1;Ontology_term=GO:0008912;gbkey=CDS;gene=fucO;go_function=lactaldehyde reductase activity|0008912||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224358.1;locus_tag=PHA56_RS27480;product=lactaldehyde reductase;protein_id=WP_014837036.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5824956 5825270 . + . ID=gene-PHA56_RS27485;Name=rhaM;gbkey=Gene;gene=rhaM;gene_biotype=protein_coding;locus_tag=PHA56_RS27485;old_locus_tag=PHA56_27485 NZ_CP116214.1 Protein Homology CDS 5824956 5825270 . + 0 ID=cds-WP_014227413.1;Parent=gene-PHA56_RS27485;Dbxref=Genbank:WP_014227413.1;Name=WP_014227413.1;Ontology_term=GO:0019301,GO:0016857;gbkey=CDS;gene=rhaM;go_function=racemase and epimerase activity%2C acting on carbohydrates and derivatives|0016857||IEA;go_process=rhamnose catabolic process|0019301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462924.1;locus_tag=PHA56_RS27485;product=L-rhamnose mutarotase;protein_id=WP_014227413.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5825318 5826697 . - . ID=gene-PHA56_RS27490;Name=PHA56_RS27490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS27490;old_locus_tag=PHA56_27490 NZ_CP116214.1 Protein Homology CDS 5825318 5826697 . - 0 ID=cds-WP_038423919.1;Parent=gene-PHA56_RS27490;Dbxref=Genbank:WP_038423919.1;Name=WP_038423919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312854.1;locus_tag=PHA56_RS27490;product=carbohydrate porin;protein_id=WP_038423919.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5826855 5828216 . - . ID=gene-PHA56_RS27495;Name=PHA56_RS27495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS27495;old_locus_tag=PHA56_27495 NZ_CP116214.1 Protein Homology CDS 5826855 5828216 . - 0 ID=cds-WP_038423918.1;Parent=gene-PHA56_RS27495;Dbxref=Genbank:WP_038423918.1;Name=WP_038423918.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014837034.1;locus_tag=PHA56_RS27495;product=right-handed parallel beta-helix repeat-containing protein;protein_id=WP_038423918.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5828276 5829964 . - . ID=gene-PHA56_RS27500;Name=PHA56_RS27500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS27500;old_locus_tag=PHA56_27500 NZ_CP116214.1 Protein Homology CDS 5828276 5829964 . - 0 ID=cds-WP_119834594.1;Parent=gene-PHA56_RS27500;Dbxref=Genbank:WP_119834594.1;Name=WP_119834594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014837033.1;locus_tag=PHA56_RS27500;product=glycoside hydrolase family 32 protein;protein_id=WP_119834594.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5829948 5831369 . - . ID=gene-PHA56_RS27505;Name=PHA56_RS27505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS27505;old_locus_tag=PHA56_27505 NZ_CP116214.1 Protein Homology CDS 5829948 5831369 . - 0 ID=cds-WP_014837032.1;Parent=gene-PHA56_RS27505;Dbxref=Genbank:WP_014837032.1;Name=WP_014837032.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004946181.1;locus_tag=PHA56_RS27505;product=MFS transporter;protein_id=WP_014837032.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5831440 5832450 . - . ID=gene-PHA56_RS27510;Name=PHA56_RS27510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS27510;old_locus_tag=PHA56_27510 NZ_CP116214.1 Protein Homology CDS 5831440 5832450 . - 0 ID=cds-WP_032693291.1;Parent=gene-PHA56_RS27510;Dbxref=Genbank:WP_032693291.1;Name=WP_032693291.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016162043.1;locus_tag=PHA56_RS27510;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_032693291.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5832779 5833360 . - . ID=gene-PHA56_RS27515;Name=PHA56_RS27515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS27515;old_locus_tag=PHA56_27515 NZ_CP116214.1 Protein Homology CDS 5832779 5833360 . - 0 ID=cds-WP_032693292.1;Parent=gene-PHA56_RS27515;Dbxref=Genbank:WP_032693292.1;Name=WP_032693292.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004855956.1;locus_tag=PHA56_RS27515;product=LuxR C-terminal-related transcriptional regulator;protein_id=WP_032693292.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5833390 5833662 . - . ID=gene-PHA56_RS27520;Name=PHA56_RS27520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS27520;old_locus_tag=PHA56_27520 NZ_CP116214.1 Protein Homology CDS 5833390 5833662 . - 0 ID=cds-WP_014227406.1;Parent=gene-PHA56_RS27520;Dbxref=Genbank:WP_014227406.1;Name=WP_014227406.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004855953.1;locus_tag=PHA56_RS27520;product=YceK/YidQ family lipoprotein;protein_id=WP_014227406.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5833676 5834533 . - . ID=gene-PHA56_RS27525;Name=mscS;gbkey=Gene;gene=mscS;gene_biotype=protein_coding;locus_tag=PHA56_RS27525;old_locus_tag=PHA56_27525 NZ_CP116214.1 Protein Homology CDS 5833676 5834533 . - 0 ID=cds-WP_014837029.1;Parent=gene-PHA56_RS27525;Dbxref=Genbank:WP_014837029.1;Name=WP_014837029.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=mscS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014227405.1;locus_tag=PHA56_RS27525;product=small-conductance mechanosensitive channel MscS;protein_id=WP_014837029.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5834731 5835021 . - . ID=gene-PHA56_RS27530;Name=PHA56_RS27530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS27530;old_locus_tag=PHA56_27530 NZ_CP116214.1 Protein Homology CDS 5834731 5835021 . - 0 ID=cds-WP_032693294.1;Parent=gene-PHA56_RS27530;Dbxref=Genbank:WP_032693294.1;Name=WP_032693294.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014837028.1;locus_tag=PHA56_RS27530;product=hypothetical protein;protein_id=WP_032693294.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5835192 5836907 . - . ID=gene-PHA56_RS27535;Name=PHA56_RS27535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS27535;old_locus_tag=PHA56_27535 NZ_CP116214.1 Protein Homology CDS 5835192 5836907 . - 0 ID=cds-WP_223226796.1;Parent=gene-PHA56_RS27535;Dbxref=Genbank:WP_223226796.1;Name=WP_223226796.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014227403.1;locus_tag=PHA56_RS27535;product=O-antigen ligase family protein;protein_id=WP_223226796.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5836921 5837634 . - . ID=gene-PHA56_RS27540;Name=PHA56_RS27540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS27540;old_locus_tag=PHA56_27540 NZ_CP116214.1 Protein Homology CDS 5836921 5837634 . - 0 ID=cds-WP_038423916.1;Parent=gene-PHA56_RS27540;Dbxref=Genbank:WP_038423916.1;Name=WP_038423916.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014227402.1;locus_tag=PHA56_RS27540;product=molecular chaperone;protein_id=WP_038423916.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5837645 5838160 . - . ID=gene-PHA56_RS27545;Name=PHA56_RS27545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS27545;old_locus_tag=PHA56_27545 NZ_CP116214.1 Protein Homology CDS 5837645 5838160 . - 0 ID=cds-WP_038423915.1;Parent=gene-PHA56_RS27545;Dbxref=Genbank:WP_038423915.1;Name=WP_038423915.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014227401.1;locus_tag=PHA56_RS27545;product=fimbrial protein;protein_id=WP_038423915.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5838160 5838690 . - . ID=gene-PHA56_RS27550;Name=PHA56_RS27550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS27550;old_locus_tag=PHA56_27550 NZ_CP116214.1 Protein Homology CDS 5838160 5838690 . - 0 ID=cds-WP_038423914.1;Parent=gene-PHA56_RS27550;Dbxref=Genbank:WP_038423914.1;Name=WP_038423914.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: protein motif:HMM:NF012635.2;locus_tag=PHA56_RS27550;product=fimbrial protein;protein_id=WP_038423914.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5838703 5839710 . - . ID=gene-PHA56_RS27555;Name=PHA56_RS27555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS27555;old_locus_tag=PHA56_27555 NZ_CP116214.1 Protein Homology CDS 5838703 5839710 . - 0 ID=cds-WP_014837022.1;Parent=gene-PHA56_RS27555;Dbxref=Genbank:WP_014837022.1;Name=WP_014837022.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: protein motif:HMM:NF012635.2;locus_tag=PHA56_RS27555;product=fimbrial protein;protein_id=WP_014837022.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5839710 5842340 . - . ID=gene-PHA56_RS27560;Name=PHA56_RS27560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS27560;old_locus_tag=PHA56_27560 NZ_CP116214.1 Protein Homology CDS 5839710 5842340 . - 0 ID=cds-WP_077255261.1;Parent=gene-PHA56_RS27560;Dbxref=Genbank:WP_077255261.1;Name=WP_077255261.1;Ontology_term=GO:0009297,GO:0005515,GO:0015473,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein binding|0005515||IEA,fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004855933.1;locus_tag=PHA56_RS27560;product=fimbrial biogenesis usher protein;protein_id=WP_077255261.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5842360 5843097 . - . ID=gene-PHA56_RS27565;Name=PHA56_RS27565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS27565;old_locus_tag=PHA56_27565 NZ_CP116214.1 Protein Homology CDS 5842360 5843097 . - 0 ID=cds-WP_014227396.1;Parent=gene-PHA56_RS27565;Dbxref=Genbank:WP_014227396.1;Name=WP_014227396.1;Ontology_term=GO:0071555,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009653641.1;locus_tag=PHA56_RS27565;product=fimbria/pilus periplasmic chaperone;protein_id=WP_014227396.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5843144 5843701 . - . ID=gene-PHA56_RS27570;Name=PHA56_RS27570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS27570;old_locus_tag=PHA56_27570 NZ_CP116214.1 Protein Homology CDS 5843144 5843701 . - 0 ID=cds-WP_014227395.1;Parent=gene-PHA56_RS27570;Dbxref=Genbank:WP_014227395.1;Name=WP_014227395.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014227395.1;locus_tag=PHA56_RS27570;product=fimbrial protein;protein_id=WP_014227395.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5843773 5844339 . - . ID=gene-PHA56_RS27575;Name=PHA56_RS27575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS27575;old_locus_tag=PHA56_27575 NZ_CP116214.1 Protein Homology CDS 5843773 5844339 . - 0 ID=cds-WP_014837020.1;Parent=gene-PHA56_RS27575;Dbxref=Genbank:WP_014837020.1;Name=WP_014837020.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014227394.1;locus_tag=PHA56_RS27575;product=fimbrial protein;protein_id=WP_014837020.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5844665 5845360 . - . ID=gene-PHA56_RS27580;Name=PHA56_RS27580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS27580;old_locus_tag=PHA56_27580 NZ_CP116214.1 Protein Homology CDS 5844665 5845360 . - 0 ID=cds-WP_014837019.1;Parent=gene-PHA56_RS27580;Dbxref=Genbank:WP_014837019.1;Name=WP_014837019.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014227393.1;locus_tag=PHA56_RS27580;product=winged helix-turn-helix transcriptional regulator;protein_id=WP_014837019.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5845654 5845848 . + . ID=gene-PHA56_RS27585;Name=PHA56_RS27585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS27585;old_locus_tag=PHA56_27585 NZ_CP116214.1 Protein Homology CDS 5845654 5845848 . + 0 ID=cds-WP_032693299.1;Parent=gene-PHA56_RS27585;Dbxref=Genbank:WP_032693299.1;Name=WP_032693299.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014227392.1;locus_tag=PHA56_RS27585;product=hypothetical protein;protein_id=WP_032693299.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5845960 5846550 . - . ID=gene-PHA56_RS27590;Name=PHA56_RS27590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS27590;old_locus_tag=PHA56_27590 NZ_CP116214.1 Protein Homology CDS 5845960 5846550 . - 0 ID=cds-WP_038423913.1;Parent=gene-PHA56_RS27590;Dbxref=Genbank:WP_038423913.1;Name=WP_038423913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014837017.1;locus_tag=PHA56_RS27590;product=maltose acetyltransferase domain-containing protein;protein_id=WP_038423913.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5846605 5847870 . - . ID=gene-PHA56_RS27595;Name=PHA56_RS27595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS27595;old_locus_tag=PHA56_27595 NZ_CP116214.1 Protein Homology CDS 5846605 5847870 . - 0 ID=cds-WP_014227390.1;Parent=gene-PHA56_RS27595;Dbxref=Genbank:WP_014227390.1;Name=WP_014227390.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224356.1;locus_tag=PHA56_RS27595;product=MFS transporter;protein_id=WP_014227390.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5847912 5850035 . - . ID=gene-PHA56_RS27600;Name=PHA56_RS27600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS27600;old_locus_tag=PHA56_27600 NZ_CP116214.1 Protein Homology CDS 5847912 5850035 . - 0 ID=cds-WP_032719424.1;Parent=gene-PHA56_RS27600;Dbxref=Genbank:WP_032719424.1;Name=WP_032719424.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224355.1;locus_tag=PHA56_RS27600;product=alpha-galactosidase;protein_id=WP_032719424.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5850150 5851145 . - . ID=gene-PHA56_RS27605;Name=PHA56_RS27605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS27605;old_locus_tag=PHA56_27605 NZ_CP116214.1 Protein Homology CDS 5850150 5851145 . - 0 ID=cds-WP_038423912.1;Parent=gene-PHA56_RS27605;Dbxref=Genbank:WP_038423912.1;Name=WP_038423912.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224354.1;locus_tag=PHA56_RS27605;product=substrate-binding domain-containing protein;protein_id=WP_038423912.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5851792 5852940 . + . ID=gene-PHA56_RS27610;Name=PHA56_RS27610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS27610;old_locus_tag=PHA56_27610 NZ_CP116214.1 Protein Homology CDS 5851792 5852940 . + 0 ID=cds-WP_232393357.1;Parent=gene-PHA56_RS27610;Dbxref=Genbank:WP_232393357.1;Name=WP_232393357.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF019310.2;locus_tag=PHA56_RS27610;product=MFS transporter;protein_id=WP_232393357.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5852977 5854104 . + . ID=gene-PHA56_RS27615;Name=PHA56_RS27615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS27615;old_locus_tag=PHA56_27615 NZ_CP116214.1 Protein Homology CDS 5852977 5854104 . + 0 ID=cds-WP_014837014.1;Parent=gene-PHA56_RS27615;Dbxref=Genbank:WP_014837014.1;Name=WP_014837014.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009653652.1;locus_tag=PHA56_RS27615;product=acyl-protein synthase;protein_id=WP_014837014.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5854106 5856514 . + . ID=gene-PHA56_RS27620;Name=PHA56_RS27620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS27620;old_locus_tag=PHA56_27620 NZ_CP116214.1 Protein Homology CDS 5854106 5856514 . + 0 ID=cds-WP_014227385.1;Parent=gene-PHA56_RS27620;Dbxref=Genbank:WP_014227385.1;Name=WP_014227385.1;Ontology_term=GO:0008218,GO:0003995;gbkey=CDS;go_function=acyl-CoA dehydrogenase activity|0003995||IEA;go_process=bioluminescence|0008218||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009653653.1;locus_tag=PHA56_RS27620;product=acyl-CoA reductase;protein_id=WP_014227385.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5856556 5857890 . + . ID=gene-PHA56_RS27625;Name=PHA56_RS27625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS27625;old_locus_tag=PHA56_27625 NZ_CP116214.1 Protein Homology CDS 5856556 5857890 . + 0 ID=cds-WP_014227384.1;Parent=gene-PHA56_RS27625;Dbxref=Genbank:WP_014227384.1;Name=WP_014227384.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014837012.1;locus_tag=PHA56_RS27625;product=AMP-binding protein;protein_id=WP_014227384.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5857887 5858804 . + . ID=gene-PHA56_RS27630;Name=PHA56_RS27630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS27630;old_locus_tag=PHA56_27630 NZ_CP116214.1 Protein Homology CDS 5857887 5858804 . + 0 ID=cds-WP_014227383.1;Parent=gene-PHA56_RS27630;Dbxref=Genbank:WP_014227383.1;Name=WP_014227383.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014227383.1;locus_tag=PHA56_RS27630;product=GNAT family N-acetyltransferase;protein_id=WP_014227383.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5858863 5859411 . - . ID=gene-PHA56_RS27635;Name=PHA56_RS27635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS27635;old_locus_tag=PHA56_27635 NZ_CP116214.1 Protein Homology CDS 5858863 5859411 . - 0 ID=cds-WP_004855902.1;Parent=gene-PHA56_RS27635;Dbxref=Genbank:WP_004855902.1;Name=WP_004855902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004855902.1;locus_tag=PHA56_RS27635;product=XRE family transcriptional regulator;protein_id=WP_004855902.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5859512 5860171 . + . ID=gene-PHA56_RS27640;Name=PHA56_RS27640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS27640;old_locus_tag=PHA56_27640 NZ_CP116214.1 Protein Homology CDS 5859512 5860171 . + 0 ID=cds-WP_009653646.1;Parent=gene-PHA56_RS27640;Dbxref=Genbank:WP_009653646.1;Name=WP_009653646.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462922.1;locus_tag=PHA56_RS27640;product=AzlC family ABC transporter permease;protein_id=WP_009653646.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5860171 5860494 . + . ID=gene-PHA56_RS27645;Name=PHA56_RS27645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS27645;old_locus_tag=PHA56_27645 NZ_CP116214.1 Protein Homology CDS 5860171 5860494 . + 0 ID=cds-WP_009653628.1;Parent=gene-PHA56_RS27645;Dbxref=Genbank:WP_009653628.1;Name=WP_009653628.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009653628.1;locus_tag=PHA56_RS27645;product=AzlD domain-containing protein;protein_id=WP_009653628.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5860582 5861136 . - . ID=gene-PHA56_RS27650;Name=PHA56_RS27650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS27650;old_locus_tag=PHA56_27650 NZ_CP116214.1 Protein Homology CDS 5860582 5861136 . - 0 ID=cds-WP_014837010.1;Parent=gene-PHA56_RS27650;Dbxref=Genbank:WP_014837010.1;Name=WP_014837010.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014227382.1;locus_tag=PHA56_RS27650;product=ATPase AAA;protein_id=WP_014837010.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5861133 5861570 . - . ID=gene-PHA56_RS27655;Name=PHA56_RS27655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS27655;old_locus_tag=PHA56_27655 NZ_CP116214.1 Protein Homology CDS 5861133 5861570 . - 0 ID=cds-WP_038423909.1;Parent=gene-PHA56_RS27655;Dbxref=Genbank:WP_038423909.1;Name=WP_038423909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224349.1;locus_tag=PHA56_RS27655;product=PTS sugar transporter subunit IIA;protein_id=WP_038423909.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5861580 5861849 . - . ID=gene-PHA56_RS27660;Name=PHA56_RS27660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS27660;old_locus_tag=PHA56_27660 NZ_CP116214.1 Protein Homology CDS 5861580 5861849 . - 0 ID=cds-WP_038423908.1;Parent=gene-PHA56_RS27660;Dbxref=Genbank:WP_038423908.1;Name=WP_038423908.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224348.1;locus_tag=PHA56_RS27660;product=hypothetical protein;protein_id=WP_038423908.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5861906 5862748 . - . ID=gene-PHA56_RS27665;Name=PHA56_RS27665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS27665;old_locus_tag=PHA56_27665 NZ_CP116214.1 Protein Homology CDS 5861906 5862748 . - 0 ID=cds-WP_014227379.1;Parent=gene-PHA56_RS27665;Dbxref=Genbank:WP_014227379.1;Name=WP_014227379.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224347.1;locus_tag=PHA56_RS27665;product=class II fructose-bisphosphate aldolase;protein_id=WP_014227379.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5862735 5864102 . - . ID=gene-PHA56_RS27670;Name=PHA56_RS27670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS27670;old_locus_tag=PHA56_27670 NZ_CP116214.1 Protein Homology CDS 5862735 5864102 . - 0 ID=cds-WP_004127157.1;Parent=gene-PHA56_RS27670;Dbxref=Genbank:WP_004127157.1;Name=WP_004127157.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224346.1;locus_tag=PHA56_RS27670;product=PTS sugar transporter subunit IIC;protein_id=WP_004127157.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5864095 5864409 . - . ID=gene-PHA56_RS27675;Name=PHA56_RS27675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS27675;old_locus_tag=PHA56_27675 NZ_CP116214.1 Protein Homology CDS 5864095 5864409 . - 0 ID=cds-WP_004855885.1;Parent=gene-PHA56_RS27675;Dbxref=Genbank:WP_004855885.1;Name=WP_004855885.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224345.1;locus_tag=PHA56_RS27675;product=PTS sugar transporter subunit IIB;protein_id=WP_004855885.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5864421 5865401 . - . ID=gene-PHA56_RS27680;Name=PHA56_RS27680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS27680;old_locus_tag=PHA56_27680 NZ_CP116214.1 Protein Homology CDS 5864421 5865401 . - 0 ID=cds-WP_004855882.1;Parent=gene-PHA56_RS27680;Dbxref=Genbank:WP_004855882.1;Name=WP_004855882.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224344.1;locus_tag=PHA56_RS27680;product=6-phosphofructokinase;protein_id=WP_004855882.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5865950 5868553 . + . ID=gene-PHA56_RS27685;Name=PHA56_RS27685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS27685;old_locus_tag=PHA56_27685 NZ_CP116214.1 Protein Homology CDS 5865950 5868553 . + 0 ID=cds-WP_038423907.1;Parent=gene-PHA56_RS27685;Dbxref=Genbank:WP_038423907.1;Name=WP_038423907.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004116802.1;locus_tag=PHA56_RS27685;product=sigma 54-interacting transcriptional regulator;protein_id=WP_038423907.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5868728 5869210 . + . ID=gene-PHA56_RS27690;Name=PHA56_RS27690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS27690;old_locus_tag=PHA56_27690 NZ_CP116214.1 Protein Homology CDS 5868728 5869210 . + 0 ID=cds-WP_014837007.1;Parent=gene-PHA56_RS27690;Dbxref=Genbank:WP_014837007.1;Name=WP_014837007.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016809585.1;locus_tag=PHA56_RS27690;product=PTS fructose transporter subunit IIA;protein_id=WP_014837007.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5869207 5870385 . + . ID=gene-PHA56_RS27695;Name=PHA56_RS27695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS27695;old_locus_tag=PHA56_27695 NZ_CP116214.1 Protein Homology CDS 5869207 5870385 . + 0 ID=cds-WP_076752438.1;Parent=gene-PHA56_RS27695;Dbxref=Genbank:WP_076752438.1;Name=WP_076752438.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004127142.1;locus_tag=PHA56_RS27695;product=glycoside hydrolase family 88 protein;protein_id=WP_076752438.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5870399 5870896 . + . ID=gene-PHA56_RS27700;Name=PHA56_RS27700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS27700;old_locus_tag=PHA56_27700 NZ_CP116214.1 Protein Homology CDS 5870399 5870896 . + 0 ID=cds-WP_014837005.1;Parent=gene-PHA56_RS27700;Dbxref=Genbank:WP_014837005.1;Name=WP_014837005.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004132852.1;locus_tag=PHA56_RS27700;product=PTS sugar transporter subunit IIB;protein_id=WP_014837005.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5870908 5871711 . + . ID=gene-PHA56_RS27705;Name=PHA56_RS27705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS27705;old_locus_tag=PHA56_27705 NZ_CP116214.1 Protein Homology CDS 5870908 5871711 . + 0 ID=cds-WP_014837004.1;Parent=gene-PHA56_RS27705;Dbxref=Genbank:WP_014837004.1;Name=WP_014837004.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966534.1;locus_tag=PHA56_RS27705;product=PTS sugar transporter subunit IIC;protein_id=WP_014837004.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5871704 5872546 . + . ID=gene-PHA56_RS27710;Name=PHA56_RS27710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS27710;old_locus_tag=PHA56_27710 NZ_CP116214.1 Protein Homology CDS 5871704 5872546 . + 0 ID=cds-WP_014837003.1;Parent=gene-PHA56_RS27710;Dbxref=Genbank:WP_014837003.1;Name=WP_014837003.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004116794.1;locus_tag=PHA56_RS27710;product=PTS system mannose/fructose/sorbose family transporter subunit IID;protein_id=WP_014837003.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5872769 5873467 . + . ID=gene-PHA56_RS27715;Name=PHA56_RS27715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS27715;old_locus_tag=PHA56_27715 NZ_CP116214.1 Protein Homology CDS 5872769 5873467 . + 0 ID=cds-WP_038423905.1;Parent=gene-PHA56_RS27715;Dbxref=Genbank:WP_038423905.1;Name=WP_038423905.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004107397.1;locus_tag=PHA56_RS27715;product=oligogalacturonate-specific porin KdgM family protein;protein_id=WP_038423905.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5873514 5875025 . - . ID=gene-PHA56_RS27720;Name=PHA56_RS27720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS27720;old_locus_tag=PHA56_27720 NZ_CP116214.1 Protein Homology CDS 5873514 5875025 . - 0 ID=cds-WP_038423904.1;Parent=gene-PHA56_RS27720;Dbxref=Genbank:WP_038423904.1;Name=WP_038423904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004127127.1;locus_tag=PHA56_RS27720;product=glycoside hydrolase 43 family protein;protein_id=WP_038423904.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5875171 5875383 . - . ID=gene-PHA56_RS27725;Name=PHA56_RS27725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS27725;old_locus_tag=PHA56_27725 NZ_CP116214.1 Protein Homology CDS 5875171 5875383 . - 0 ID=cds-WP_038423903.1;Parent=gene-PHA56_RS27725;Dbxref=Genbank:WP_038423903.1;Name=WP_038423903.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224343.1;locus_tag=PHA56_RS27725;product=DUF1471 domain-containing protein;protein_id=WP_038423903.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5875512 5876348 . - . ID=gene-PHA56_RS27730;Name=fdhD;gbkey=Gene;gene=fdhD;gene_biotype=protein_coding;locus_tag=PHA56_RS27730;old_locus_tag=PHA56_27730 NZ_CP116214.1 Protein Homology CDS 5875512 5876348 . - 0 ID=cds-WP_014227378.1;Parent=gene-PHA56_RS27730;Dbxref=Genbank:WP_014227378.1;Name=WP_014227378.1;Ontology_term=GO:0009061,GO:0015942,GO:0008863,GO:0009326;gbkey=CDS;gene=fdhD;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA;go_process=anaerobic respiration|0009061||IEA,formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224342.1;locus_tag=PHA56_RS27730;product=formate dehydrogenase accessory sulfurtransferase FdhD;protein_id=WP_014227378.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5876505 5879555 . + . ID=gene-PHA56_RS27735;Name=fdnG;gbkey=Gene;gene=fdnG;gene_biotype=protein_coding;locus_tag=PHA56_RS27735;old_locus_tag=PHA56_27735 NZ_CP116214.1 Protein Homology CDS 5876505 5879555 . + 0 ID=cds-WP_014837000.1;Parent=gene-PHA56_RS27735;Dbxref=Genbank:WP_014837000.1;Name=WP_014837000.1;Ontology_term=GO:0015942,GO:0009326;gbkey=CDS;gene=fdnG;go_component=formate dehydrogenase complex|0009326||IEA;go_process=formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460529.1;locus_tag=PHA56_RS27735;product=formate dehydrogenase-N subunit alpha;protein_id=WP_014837000.1;transl_except=(pos:5877090..5877092%2Caa:Sec);transl_table=11 NZ_CP116214.1 RefSeq gene 5879568 5880470 . + . ID=gene-PHA56_RS27740;Name=fdxH;gbkey=Gene;gene=fdxH;gene_biotype=protein_coding;locus_tag=PHA56_RS27740;old_locus_tag=PHA56_27740 NZ_CP116214.1 Protein Homology CDS 5879568 5880470 . + 0 ID=cds-WP_014227375.1;Parent=gene-PHA56_RS27740;Dbxref=Genbank:WP_014227375.1;Name=WP_014227375.1;Ontology_term=GO:0045333,GO:0008863;gbkey=CDS;gene=fdxH;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA;go_process=cellular respiration|0045333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224339.1;locus_tag=PHA56_RS27740;product=formate dehydrogenase subunit beta;protein_id=WP_014227375.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5880467 5881102 . + . ID=gene-PHA56_RS27745;Name=fdoI;gbkey=Gene;gene=fdoI;gene_biotype=protein_coding;locus_tag=PHA56_RS27745;old_locus_tag=PHA56_27745 NZ_CP116214.1 Protein Homology CDS 5880467 5881102 . + 0 ID=cds-WP_004116787.1;Parent=gene-PHA56_RS27745;Dbxref=Genbank:WP_004116787.1;Name=WP_004116787.1;gbkey=CDS;gene=fdoI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004116787.1;locus_tag=PHA56_RS27745;product=formate dehydrogenase cytochrome b556 subunit;protein_id=WP_004116787.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5881445 5882374 . + . ID=gene-PHA56_RS27750;Name=fdhE;gbkey=Gene;gene=fdhE;gene_biotype=protein_coding;locus_tag=PHA56_RS27750;old_locus_tag=PHA56_27750 NZ_CP116214.1 Protein Homology CDS 5881445 5882374 . + 0 ID=cds-WP_004132861.1;Parent=gene-PHA56_RS27750;Dbxref=Genbank:WP_004132861.1;Name=WP_004132861.1;gbkey=CDS;gene=fdhE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121819.1;locus_tag=PHA56_RS27750;product=formate dehydrogenase accessory protein FdhE;protein_id=WP_004132861.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5882570 5883487 . + . ID=gene-PHA56_RS27755;Name=PHA56_RS27755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS27755;old_locus_tag=PHA56_27755 NZ_CP116214.1 Protein Homology CDS 5882570 5883487 . + 0 ID=cds-WP_014836999.1;Parent=gene-PHA56_RS27755;Dbxref=Genbank:WP_014836999.1;Name=WP_014836999.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224334.1;locus_tag=PHA56_RS27755;product=alpha/beta hydrolase;protein_id=WP_014836999.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5883505 5884446 . - . ID=gene-PHA56_RS27760;Name=fabY;gbkey=Gene;gene=fabY;gene_biotype=protein_coding;gene_synonym=yiiD;locus_tag=PHA56_RS27760;old_locus_tag=PHA56_27760 NZ_CP116214.1 Protein Homology CDS 5883505 5884446 . - 0 ID=cds-WP_009652900.1;Parent=gene-PHA56_RS27760;Dbxref=Genbank:WP_009652900.1;Name=WP_009652900.1;gbkey=CDS;gene=fabY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001666856.1;locus_tag=PHA56_RS27760;product=fatty acid biosynthesis protein FabY;protein_id=WP_009652900.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5884491 5884928 . - . ID=gene-PHA56_RS27765;Name=dtd;gbkey=Gene;gene=dtd;gene_biotype=protein_coding;locus_tag=PHA56_RS27765;old_locus_tag=PHA56_27765 NZ_CP116214.1 Protein Homology CDS 5884491 5884928 . - 0 ID=cds-WP_014227372.1;Parent=gene-PHA56_RS27765;Dbxref=Genbank:WP_014227372.1;Name=WP_014227372.1;Ontology_term=GO:0008152,GO:0004045;gbkey=CDS;gene=dtd;go_function=aminoacyl-tRNA hydrolase activity|0004045||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000560980.1;locus_tag=PHA56_RS27765;product=D-aminoacyl-tRNA deacylase;protein_id=WP_014227372.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5884925 5885785 . - . ID=gene-PHA56_RS27770;Name=PHA56_RS27770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS27770;old_locus_tag=PHA56_27770 NZ_CP116214.1 Protein Homology CDS 5884925 5885785 . - 0 ID=cds-WP_004127107.1;Parent=gene-PHA56_RS27770;Dbxref=Genbank:WP_004127107.1;Name=WP_004127107.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004127107.1;locus_tag=PHA56_RS27770;product=virulence factor BrkB family protein;protein_id=WP_004127107.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5885779 5886378 . - . ID=gene-PHA56_RS27775;Name=yihX;gbkey=Gene;gene=yihX;gene_biotype=protein_coding;locus_tag=PHA56_RS27775;old_locus_tag=PHA56_27775 NZ_CP116214.1 Protein Homology CDS 5885779 5886378 . - 0 ID=cds-WP_038423902.1;Parent=gene-PHA56_RS27775;Dbxref=Genbank:WP_038423902.1;Name=WP_038423902.1;gbkey=CDS;gene=yihX;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224330.1;locus_tag=PHA56_RS27775;product=glucose-1-phosphatase;protein_id=WP_038423902.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5886512 5888335 . - . ID=gene-PHA56_RS27780;Name=typA;gbkey=Gene;gene=typA;gene_biotype=protein_coding;locus_tag=PHA56_RS27780;old_locus_tag=PHA56_27780 NZ_CP116214.1 Protein Homology CDS 5886512 5888335 . - 0 ID=cds-WP_004127103.1;Parent=gene-PHA56_RS27780;Dbxref=Genbank:WP_004127103.1;Name=WP_004127103.1;gbkey=CDS;gene=typA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224329.1;locus_tag=PHA56_RS27780;product=ribosome-dependent GTPase TypA;protein_id=WP_004127103.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5888714 5890123 . + . ID=gene-PHA56_RS27785;Name=glnA;gbkey=Gene;gene=glnA;gene_biotype=protein_coding;locus_tag=PHA56_RS27785;old_locus_tag=PHA56_27785 NZ_CP116214.1 Protein Homology CDS 5888714 5890123 . + 0 ID=cds-WP_004127100.1;Parent=gene-PHA56_RS27785;Dbxref=Genbank:WP_004127100.1;Name=WP_004127100.1;Ontology_term=GO:0006542,GO:0006807,GO:0004356;gbkey=CDS;gene=glnA;go_function=glutamate-ammonia ligase activity|0004356||IEA;go_process=glutamine biosynthetic process|0006542||IEA,nitrogen compound metabolic process|0006807||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020233234.1;locus_tag=PHA56_RS27785;product=glutamate--ammonia ligase;protein_id=WP_004127100.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5890312 5891361 . + . ID=gene-PHA56_RS27790;Name=glnL;gbkey=Gene;gene=glnL;gene_biotype=protein_coding;locus_tag=PHA56_RS27790;old_locus_tag=PHA56_27790 NZ_CP116214.1 Protein Homology CDS 5890312 5891361 . + 0 ID=cds-WP_004127098.1;Parent=gene-PHA56_RS27790;Dbxref=Genbank:WP_004127098.1;Name=WP_004127098.1;Ontology_term=GO:0006355,GO:0007165,GO:0016310,GO:0000155;gbkey=CDS;gene=glnL;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224326.1;locus_tag=PHA56_RS27790;product=nitrogen regulation protein NR(II);protein_id=WP_004127098.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5891370 5892779 . + . ID=gene-PHA56_RS27795;Name=glnG;gbkey=Gene;gene=glnG;gene_biotype=protein_coding;locus_tag=PHA56_RS27795;old_locus_tag=PHA56_27795 NZ_CP116214.1 Protein Homology CDS 5891370 5892779 . + 0 ID=cds-WP_004107350.1;Parent=gene-PHA56_RS27795;Dbxref=Genbank:WP_004107350.1;Name=WP_004107350.1;Ontology_term=GO:0006355,GO:0043565;gbkey=CDS;gene=glnG;go_function=sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133942.1;locus_tag=PHA56_RS27795;product=nitrogen regulation protein NR(I);protein_id=WP_004107350.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5892891 5893001 . + . ID=gene-PHA56_RS27800;Name=PHA56_RS27800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS27800;old_locus_tag=PHA56_27800 NZ_CP116214.1 Protein Homology CDS 5892891 5893001 . + 0 ID=cds-WP_004855828.1;Parent=gene-PHA56_RS27800;Dbxref=Genbank:WP_004855828.1;Name=WP_004855828.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791260.1;locus_tag=PHA56_RS27800;product=YshB family small membrane protein;protein_id=WP_004855828.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5893038 5894411 . - . ID=gene-PHA56_RS27805;Name=hemN;gbkey=Gene;gene=hemN;gene_biotype=protein_coding;locus_tag=PHA56_RS27805;old_locus_tag=PHA56_27805 NZ_CP116214.1 Protein Homology CDS 5893038 5894411 . - 0 ID=cds-WP_032693313.1;Parent=gene-PHA56_RS27805;Dbxref=Genbank:WP_032693313.1;Name=WP_032693313.1;Ontology_term=GO:0006779,GO:0051989;gbkey=CDS;gene=hemN;go_function=coproporphyrinogen dehydrogenase activity|0051989||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224324.1;locus_tag=PHA56_RS27805;product=oxygen-independent coproporphyrinogen III oxidase;protein_id=WP_032693313.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5894600 5895106 . - . ID=gene-PHA56_RS27810;Name=yihI;gbkey=Gene;gene=yihI;gene_biotype=protein_coding;locus_tag=PHA56_RS27810;old_locus_tag=PHA56_27810 NZ_CP116214.1 Protein Homology CDS 5894600 5895106 . - 0 ID=cds-WP_014227367.1;Parent=gene-PHA56_RS27810;Dbxref=Genbank:WP_014227367.1;Name=WP_014227367.1;gbkey=CDS;gene=yihI;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224323.1;locus_tag=PHA56_RS27810;product=Der GTPase-activating protein YihI;protein_id=WP_014227367.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5895690 5896322 . + . ID=gene-PHA56_RS27815;Name=yihA;gbkey=Gene;gene=yihA;gene_biotype=protein_coding;locus_tag=PHA56_RS27815;old_locus_tag=PHA56_27815 NZ_CP116214.1 Protein Homology CDS 5895690 5896322 . + 0 ID=cds-WP_004855823.1;Parent=gene-PHA56_RS27815;Dbxref=Genbank:WP_004855823.1;Name=WP_004855823.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=yihA;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224322.1;locus_tag=PHA56_RS27815;product=ribosome biogenesis GTP-binding protein YihA/YsxC;protein_id=WP_004855823.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5896672 5899461 . - . ID=gene-PHA56_RS27820;Name=polA;gbkey=Gene;gene=polA;gene_biotype=protein_coding;locus_tag=PHA56_RS27820;old_locus_tag=PHA56_27820 NZ_CP116214.1 Protein Homology CDS 5896672 5899461 . - 0 ID=cds-WP_038423901.1;Parent=gene-PHA56_RS27820;Dbxref=Genbank:WP_038423901.1;Name=WP_038423901.1;Ontology_term=GO:0006261,GO:0003676,GO:0003677,GO:0003887,GO:0008408;gbkey=CDS;gene=polA;go_function=nucleic acid binding|0003676||IEA,DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA-templated DNA replication|0006261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462879.1;locus_tag=PHA56_RS27820;product=DNA polymerase I;protein_id=WP_038423901.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5899858 5900757 . + . ID=gene-PHA56_RS27825;Name=PHA56_RS27825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS27825;old_locus_tag=PHA56_27825 NZ_CP116214.1 Protein Homology CDS 5899858 5900757 . + 0 ID=cds-WP_014227365.1;Parent=gene-PHA56_RS27825;Dbxref=Genbank:WP_014227365.1;Name=WP_014227365.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224320.1;locus_tag=PHA56_RS27825;product=acyltransferase;protein_id=WP_014227365.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5900807 5901430 . - . ID=gene-PHA56_RS27830;Name=dsbA;gbkey=Gene;gene=dsbA;gene_biotype=protein_coding;locus_tag=PHA56_RS27830;old_locus_tag=PHA56_27830 NZ_CP116214.1 Protein Homology CDS 5900807 5901430 . - 0 ID=cds-WP_004855816.1;Parent=gene-PHA56_RS27830;Dbxref=Genbank:WP_004855816.1;Name=WP_004855816.1;Ontology_term=GO:0016491;gbkey=CDS;gene=dsbA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224319.1;locus_tag=PHA56_RS27830;product=thiol:disulfide interchange protein DsbA;protein_id=WP_004855816.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5901458 5902444 . - . ID=gene-PHA56_RS27835;Name=PHA56_RS27835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS27835;old_locus_tag=PHA56_27835 NZ_CP116214.1 Protein Homology CDS 5901458 5902444 . - 0 ID=cds-WP_014839875.1;Parent=gene-PHA56_RS27835;Dbxref=Genbank:WP_014839875.1;Name=WP_014839875.1;Ontology_term=GO:0006468,GO:0004674;gbkey=CDS;go_function=protein serine/threonine kinase activity|0004674||IEA;go_process=protein phosphorylation|0006468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224318.1;locus_tag=PHA56_RS27835;product=serine/threonine protein kinase;protein_id=WP_014839875.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5902520 5902789 . - . ID=gene-PHA56_RS27840;Name=PHA56_RS27840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS27840;old_locus_tag=PHA56_27840 NZ_CP116214.1 Protein Homology CDS 5902520 5902789 . - 0 ID=cds-WP_004855810.1;Parent=gene-PHA56_RS27840;Dbxref=Genbank:WP_004855810.1;Name=WP_004855810.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966571.1;locus_tag=PHA56_RS27840;product=YihD family protein;protein_id=WP_004855810.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5902861 5903442 . + . ID=gene-PHA56_RS27845;Name=mobA;gbkey=Gene;gene=mobA;gene_biotype=protein_coding;locus_tag=PHA56_RS27845;old_locus_tag=PHA56_27845 NZ_CP116214.1 Protein Homology CDS 5902861 5903442 . + 0 ID=cds-WP_038423900.1;Parent=gene-PHA56_RS27845;Dbxref=Genbank:WP_038423900.1;Name=WP_038423900.1;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;gene=mobA;go_function=catalytic activity|0003824||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019725421.1;locus_tag=PHA56_RS27845;product=molybdenum cofactor guanylyltransferase MobA;protein_id=WP_038423900.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5903439 5903957 . + . ID=gene-PHA56_RS27850;Name=mobB;gbkey=Gene;gene=mobB;gene_biotype=protein_coding;locus_tag=PHA56_RS27850;old_locus_tag=PHA56_27850 NZ_CP116214.1 Protein Homology CDS 5903439 5903957 . + 0 ID=cds-WP_038423899.1;Parent=gene-PHA56_RS27850;Dbxref=Genbank:WP_038423899.1;Name=WP_038423899.1;Ontology_term=GO:0006777,GO:0005525;gbkey=CDS;gene=mobB;go_function=GTP binding|0005525||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014839873.1;locus_tag=PHA56_RS27850;product=molybdopterin-guanine dinucleotide biosynthesis protein MobB;protein_id=WP_038423899.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5904070 5904185 . - . ID=gene-PHA56_RS27855;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=PHA56_RS27855;old_locus_tag=PHA56_27855 NZ_CP116214.1 cmsearch rRNA 5904070 5904185 . - . ID=rna-PHA56_RS27855;Parent=gene-PHA56_RS27855;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA56_RS27855;product=5S ribosomal RNA NZ_CP116214.1 cmsearch exon 5904070 5904185 . - . ID=exon-PHA56_RS27855-1;Parent=rna-PHA56_RS27855;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA56_RS27855;product=5S ribosomal RNA NZ_CP116214.1 RefSeq gene 5904389 5907294 . - . ID=gene-PHA56_RS27860;Name=PHA56_RS27860;gbkey=Gene;gene_biotype=rRNA;locus_tag=PHA56_RS27860;old_locus_tag=PHA56_27860 NZ_CP116214.1 cmsearch rRNA 5904389 5907294 . - . ID=rna-PHA56_RS27860;Parent=gene-PHA56_RS27860;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA56_RS27860;product=23S ribosomal RNA NZ_CP116214.1 cmsearch exon 5904389 5907294 . - . ID=exon-PHA56_RS27860-1;Parent=rna-PHA56_RS27860;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA56_RS27860;product=23S ribosomal RNA NZ_CP116214.1 RefSeq gene 5907501 5909040 . - . ID=gene-PHA56_RS27865;Name=PHA56_RS27865;gbkey=Gene;gene_biotype=rRNA;locus_tag=PHA56_RS27865;old_locus_tag=PHA56_27865 NZ_CP116214.1 cmsearch rRNA 5907501 5909040 . - . ID=rna-PHA56_RS27865;Parent=gene-PHA56_RS27865;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA56_RS27865;product=16S ribosomal RNA NZ_CP116214.1 cmsearch exon 5907501 5909040 . - . ID=exon-PHA56_RS27865-1;Parent=rna-PHA56_RS27865;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA56_RS27865;product=16S ribosomal RNA NZ_CP116214.1 RefSeq gene 5909521 5910222 . + . ID=gene-PHA56_RS27870;Name=PHA56_RS27870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS27870;old_locus_tag=PHA56_27870 NZ_CP116214.1 Protein Homology CDS 5909521 5910222 . + 0 ID=cds-WP_004855803.1;Parent=gene-PHA56_RS27870;Dbxref=Genbank:WP_004855803.1;Name=WP_004855803.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224314.1;locus_tag=PHA56_RS27870;product=FadR/GntR family transcriptional regulator;protein_id=WP_004855803.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5910235 5911632 . + . ID=gene-PHA56_RS27875;Name=mdtD;gbkey=Gene;gene=mdtD;gene_biotype=protein_coding;locus_tag=PHA56_RS27875;old_locus_tag=PHA56_27875 NZ_CP116214.1 Protein Homology CDS 5910235 5911632 . + 0 ID=cds-WP_014227360.1;Parent=gene-PHA56_RS27875;Dbxref=Genbank:WP_014227360.1;Name=WP_014227360.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mdtD;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224313.1;locus_tag=PHA56_RS27875;product=multidrug transporter subunit MdtD;protein_id=WP_014227360.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5911629 5912621 . - . ID=gene-PHA56_RS27880;Name=rbsR;gbkey=Gene;gene=rbsR;gene_biotype=protein_coding;locus_tag=PHA56_RS27880;old_locus_tag=PHA56_27880 NZ_CP116214.1 Protein Homology CDS 5911629 5912621 . - 0 ID=cds-WP_014227359.1;Parent=gene-PHA56_RS27880;Dbxref=Genbank:WP_014227359.1;Name=WP_014227359.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=rbsR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312722.1;locus_tag=PHA56_RS27880;product=ribose operon transcriptional repressor RbsR;protein_id=WP_014227359.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5912625 5913557 . - . ID=gene-PHA56_RS27885;Name=rbsK;gbkey=Gene;gene=rbsK;gene_biotype=protein_coding;locus_tag=PHA56_RS27885;old_locus_tag=PHA56_27885 NZ_CP116214.1 Protein Homology CDS 5912625 5913557 . - 0 ID=cds-WP_161506359.1;Parent=gene-PHA56_RS27885;Dbxref=Genbank:WP_161506359.1;Name=WP_161506359.1;Ontology_term=GO:0006014,GO:0004747;gbkey=CDS;gene=rbsK;go_function=ribokinase activity|0004747||IEA;go_process=D-ribose metabolic process|0006014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224311.1;locus_tag=PHA56_RS27885;product=ribokinase;protein_id=WP_161506359.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5913656 5914546 . - . ID=gene-PHA56_RS27890;Name=rbsB;gbkey=Gene;gene=rbsB;gene_biotype=protein_coding;locus_tag=PHA56_RS27890;old_locus_tag=PHA56_27890 NZ_CP116214.1 Protein Homology CDS 5913656 5914546 . - 0 ID=cds-WP_004855794.1;Parent=gene-PHA56_RS27890;Dbxref=Genbank:WP_004855794.1;Name=WP_004855794.1;gbkey=CDS;gene=rbsB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224310.1;locus_tag=PHA56_RS27890;product=ribose ABC transporter substrate-binding protein RbsB;protein_id=WP_004855794.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5914574 5915539 . - . ID=gene-PHA56_RS27895;Name=rbsC;gbkey=Gene;gene=rbsC;gene_biotype=protein_coding;locus_tag=PHA56_RS27895;old_locus_tag=PHA56_27895 NZ_CP116214.1 Protein Homology CDS 5914574 5915539 . - 0 ID=cds-WP_004855792.1;Parent=gene-PHA56_RS27895;Dbxref=Genbank:WP_004855792.1;Name=WP_004855792.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=rbsC;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002882531.1;locus_tag=PHA56_RS27895;product=ribose ABC transporter permease;protein_id=WP_004855792.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5915545 5917050 . - . ID=gene-PHA56_RS27900;Name=rbsA;gbkey=Gene;gene=rbsA;gene_biotype=protein_coding;locus_tag=PHA56_RS27900;old_locus_tag=PHA56_27900 NZ_CP116214.1 Protein Homology CDS 5915545 5917050 . - 0 ID=cds-WP_032718765.1;Parent=gene-PHA56_RS27900;Dbxref=Genbank:WP_032718765.1;Name=WP_032718765.1;Ontology_term=GO:0005524;gbkey=CDS;gene=rbsA;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224308.1;locus_tag=PHA56_RS27900;product=ribose ABC transporter ATP-binding protein RbsA;protein_id=WP_032718765.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5917061 5917480 . - . ID=gene-PHA56_RS27905;Name=rbsD;gbkey=Gene;gene=rbsD;gene_biotype=protein_coding;locus_tag=PHA56_RS27905;old_locus_tag=PHA56_27905 NZ_CP116214.1 Protein Homology CDS 5917061 5917480 . - 0 ID=cds-WP_004855789.1;Parent=gene-PHA56_RS27905;Dbxref=Genbank:WP_004855789.1;Name=WP_004855789.1;Ontology_term=GO:0016872;gbkey=CDS;gene=rbsD;go_function=intramolecular lyase activity|0016872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224307.1;locus_tag=PHA56_RS27905;product=D-ribose pyranase;protein_id=WP_004855789.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5917666 5919534 . - . ID=gene-PHA56_RS27910;Name=kup;gbkey=Gene;gene=kup;gene_biotype=protein_coding;locus_tag=PHA56_RS27910;old_locus_tag=PHA56_27910 NZ_CP116214.1 Protein Homology CDS 5917666 5919534 . - 0 ID=cds-WP_014227355.1;Parent=gene-PHA56_RS27910;Dbxref=Genbank:WP_014227355.1;Name=WP_014227355.1;Ontology_term=GO:0015079,GO:0016020;gbkey=CDS;gene=kup;go_component=membrane|0016020||IEA;go_function=potassium ion transmembrane transporter activity|0015079||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000102304.1;locus_tag=PHA56_RS27910;product=low affinity potassium transporter Kup;protein_id=WP_014227355.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5919752 5921251 . + . ID=gene-PHA56_RS27915;Name=ravA;gbkey=Gene;gene=ravA;gene_biotype=protein_coding;locus_tag=PHA56_RS27915;old_locus_tag=PHA56_27915 NZ_CP116214.1 Protein Homology CDS 5919752 5921251 . + 0 ID=cds-WP_014227354.1;Parent=gene-PHA56_RS27915;Dbxref=Genbank:WP_014227354.1;Name=WP_014227354.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;gene=ravA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004116756.1;locus_tag=PHA56_RS27915;product=ATPase RavA;protein_id=WP_014227354.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5921248 5922696 . + . ID=gene-PHA56_RS27920;Name=viaA;gbkey=Gene;gene=viaA;gene_biotype=protein_coding;locus_tag=PHA56_RS27920;old_locus_tag=PHA56_27920 NZ_CP116214.1 Protein Homology CDS 5921248 5922696 . + 0 ID=cds-WP_014839869.1;Parent=gene-PHA56_RS27920;Dbxref=Genbank:WP_014839869.1;Name=WP_014839869.1;gbkey=CDS;gene=viaA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224304.1;locus_tag=PHA56_RS27920;product=ATPase RavA stimulator ViaA;protein_id=WP_014839869.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5922704 5923696 . - . ID=gene-PHA56_RS27925;Name=asnA;gbkey=Gene;gene=asnA;gene_biotype=protein_coding;locus_tag=PHA56_RS27925;old_locus_tag=PHA56_27925 NZ_CP116214.1 Protein Homology CDS 5922704 5923696 . - 0 ID=cds-WP_038423898.1;Parent=gene-PHA56_RS27925;Dbxref=Genbank:WP_038423898.1;Name=WP_038423898.1;Ontology_term=GO:0006529,GO:0004071;gbkey=CDS;gene=asnA;go_function=aspartate-ammonia ligase activity|0004071||IEA;go_process=asparagine biosynthetic process|0006529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224303.1;locus_tag=PHA56_RS27925;product=aspartate--ammonia ligase;protein_id=WP_038423898.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5923849 5924307 . + . ID=gene-PHA56_RS27930;Name=asnC;gbkey=Gene;gene=asnC;gene_biotype=protein_coding;locus_tag=PHA56_RS27930;old_locus_tag=PHA56_27930 NZ_CP116214.1 Protein Homology CDS 5923849 5924307 . + 0 ID=cds-WP_004107306.1;Parent=gene-PHA56_RS27930;Dbxref=Genbank:WP_004107306.1;Name=WP_004107306.1;Ontology_term=GO:0043565;gbkey=CDS;gene=asnC;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312712.1;locus_tag=PHA56_RS27930;product=transcriptional regulator AsnC;protein_id=WP_004107306.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5924399 5924839 . + . ID=gene-PHA56_RS27935;Name=mioC;gbkey=Gene;gene=mioC;gene_biotype=protein_coding;locus_tag=PHA56_RS27935;old_locus_tag=PHA56_27935 NZ_CP116214.1 Protein Homology CDS 5924399 5924839 . + 0 ID=cds-WP_009653317.1;Parent=gene-PHA56_RS27935;Dbxref=Genbank:WP_009653317.1;Name=WP_009653317.1;Ontology_term=GO:0010181;gbkey=CDS;gene=mioC;go_function=FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224301.1;locus_tag=PHA56_RS27935;product=FMN-binding protein MioC;protein_id=WP_009653317.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5925221 5927110 . + . ID=gene-PHA56_RS27940;Name=mnmG;gbkey=Gene;gene=mnmG;gene_biotype=protein_coding;locus_tag=PHA56_RS27940;old_locus_tag=PHA56_27940 NZ_CP116214.1 Protein Homology CDS 5925221 5927110 . + 0 ID=cds-WP_014839867.1;Parent=gene-PHA56_RS27940;Dbxref=Genbank:WP_014839867.1;Name=WP_014839867.1;Ontology_term=GO:0002098,GO:0008033,GO:0050660;gbkey=CDS;gene=mnmG;go_function=flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA wobble uridine modification|0002098||IEA,tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000499793.1;locus_tag=PHA56_RS27940;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG;protein_id=WP_014839867.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5927224 5927847 . + . ID=gene-PHA56_RS27945;Name=rsmG;gbkey=Gene;gene=rsmG;gene_biotype=protein_coding;locus_tag=PHA56_RS27945;old_locus_tag=PHA56_27945 NZ_CP116214.1 Protein Homology CDS 5927224 5927847 . + 0 ID=cds-WP_004855770.1;Parent=gene-PHA56_RS27945;Dbxref=Genbank:WP_004855770.1;Name=WP_004855770.1;Ontology_term=GO:0031167,GO:0046118,GO:0008168,GO:0005575;gbkey=CDS;gene=rsmG;go_component=cellular_component|0005575||IEA;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA methylation|0031167||IEA,7-methylguanosine biosynthetic process|0046118||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004871909.1;locus_tag=PHA56_RS27945;product=16S rRNA (guanine(527)-N(7))-methyltransferase RsmG;protein_id=WP_004855770.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5928464 5928844 . + . ID=gene-PHA56_RS27950;Name=atpI;gbkey=Gene;gene=atpI;gene_biotype=protein_coding;locus_tag=PHA56_RS27950;old_locus_tag=PHA56_27950 NZ_CP116214.1 Protein Homology CDS 5928464 5928844 . + 0 ID=cds-WP_004127040.1;Parent=gene-PHA56_RS27950;Dbxref=Genbank:WP_004127040.1;Name=WP_004127040.1;gbkey=CDS;gene=atpI;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229614.1;locus_tag=PHA56_RS27950;product=F0F1 ATP synthase subunit I;protein_id=WP_004127040.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5928853 5929668 . + . ID=gene-PHA56_RS27955;Name=atpB;gbkey=Gene;gene=atpB;gene_biotype=protein_coding;locus_tag=PHA56_RS27955;old_locus_tag=PHA56_27955 NZ_CP116214.1 Protein Homology CDS 5928853 5929668 . + 0 ID=cds-WP_004127037.1;Parent=gene-PHA56_RS27955;Dbxref=Genbank:WP_004127037.1;Name=WP_004127037.1;Ontology_term=GO:0015986,GO:0015078,GO:0045263;gbkey=CDS;gene=atpB;go_component=proton-transporting ATP synthase complex%2C coupling factor F(o)|0045263||IEA;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121454.1;locus_tag=PHA56_RS27955;product=F0F1 ATP synthase subunit A;protein_id=WP_004127037.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5929716 5929955 . + . ID=gene-PHA56_RS27960;Name=atpE;gbkey=Gene;gene=atpE;gene_biotype=protein_coding;locus_tag=PHA56_RS27960;old_locus_tag=PHA56_27960 NZ_CP116214.1 Protein Homology CDS 5929716 5929955 . + 0 ID=cds-WP_000429386.1;Parent=gene-PHA56_RS27960;Dbxref=Genbank:WP_000429386.1;Name=WP_000429386.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;gene=atpE;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246596.1;locus_tag=PHA56_RS27960;product=F0F1 ATP synthase subunit C;protein_id=WP_000429386.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5930012 5930482 . + . ID=gene-PHA56_RS27965;Name=atpF;gbkey=Gene;gene=atpF;gene_biotype=protein_coding;locus_tag=PHA56_RS27965;old_locus_tag=PHA56_27965 NZ_CP116214.1 Protein Homology CDS 5930012 5930482 . + 0 ID=cds-WP_004107293.1;Parent=gene-PHA56_RS27965;Dbxref=Genbank:WP_004107293.1;Name=WP_004107293.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;gene=atpF;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001052215.1;locus_tag=PHA56_RS27965;product=F0F1 ATP synthase subunit B;protein_id=WP_004107293.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5930497 5931030 . + . ID=gene-PHA56_RS27970;Name=atpH;gbkey=Gene;gene=atpH;gene_biotype=protein_coding;locus_tag=PHA56_RS27970;old_locus_tag=PHA56_27970 NZ_CP116214.1 Protein Homology CDS 5930497 5931030 . + 0 ID=cds-WP_004855764.1;Parent=gene-PHA56_RS27970;Dbxref=Genbank:WP_004855764.1;Name=WP_004855764.1;Ontology_term=GO:0015986,GO:0046933,GO:0016020;gbkey=CDS;gene=atpH;go_component=membrane|0016020||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966593.1;locus_tag=PHA56_RS27970;product=F0F1 ATP synthase subunit delta;protein_id=WP_004855764.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5931043 5932584 . + . ID=gene-PHA56_RS27975;Name=atpA;gbkey=Gene;gene=atpA;gene_biotype=protein_coding;locus_tag=PHA56_RS27975;old_locus_tag=PHA56_27975 NZ_CP116214.1 Protein Homology CDS 5931043 5932584 . + 0 ID=cds-WP_004127029.1;Parent=gene-PHA56_RS27975;Dbxref=Genbank:WP_004127029.1;Name=WP_004127029.1;Ontology_term=GO:0015986,GO:0046933,GO:0000275,GO:0045261,GO:0045262;gbkey=CDS;gene=atpA;go_component=mitochondrial proton-transporting ATP synthase complex%2C catalytic sector F(1)|0000275||IEA,proton-transporting ATP synthase complex%2C catalytic core F(1)|0045261||IEA,plasma membrane proton-transporting ATP synthase complex%2C catalytic core F(1)|0045262||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001176751.1;locus_tag=PHA56_RS27975;product=F0F1 ATP synthase subunit alpha;protein_id=WP_004127029.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5932635 5933498 . + . ID=gene-PHA56_RS27980;Name=atpG;gbkey=Gene;gene=atpG;gene_biotype=protein_coding;locus_tag=PHA56_RS27980;old_locus_tag=PHA56_27980 NZ_CP116214.1 Protein Homology CDS 5932635 5933498 . + 0 ID=cds-WP_004107278.1;Parent=gene-PHA56_RS27980;Dbxref=Genbank:WP_004107278.1;Name=WP_004107278.1;Ontology_term=GO:0015986,GO:0046933,GO:0045261;gbkey=CDS;gene=atpG;go_component=proton-transporting ATP synthase complex%2C catalytic core F(1)|0045261||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882764.1;locus_tag=PHA56_RS27980;product=F0F1 ATP synthase subunit gamma;protein_id=WP_004107278.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5933525 5934907 . + . ID=gene-PHA56_RS27985;Name=atpD;gbkey=Gene;gene=atpD;gene_biotype=protein_coding;locus_tag=PHA56_RS27985;old_locus_tag=PHA56_27985 NZ_CP116214.1 Protein Homology CDS 5933525 5934907 . + 0 ID=cds-WP_004107276.1;Parent=gene-PHA56_RS27985;Dbxref=Genbank:WP_004107276.1;Name=WP_004107276.1;Ontology_term=GO:0015986,GO:0046933,GO:0000275,GO:0045261,GO:0045262;gbkey=CDS;gene=atpD;go_component=mitochondrial proton-transporting ATP synthase complex%2C catalytic sector F(1)|0000275||IEA,proton-transporting ATP synthase complex%2C catalytic core F(1)|0045261||IEA,plasma membrane proton-transporting ATP synthase complex%2C catalytic core F(1)|0045262||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017800291.1;locus_tag=PHA56_RS27985;product=F0F1 ATP synthase subunit beta;protein_id=WP_004107276.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5934928 5935347 . + . ID=gene-PHA56_RS27990;Name=PHA56_RS27990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS27990;old_locus_tag=PHA56_27990 NZ_CP116214.1 Protein Homology CDS 5934928 5935347 . + 0 ID=cds-WP_004107274.1;Parent=gene-PHA56_RS27990;Dbxref=Genbank:WP_004107274.1;Name=WP_004107274.1;Ontology_term=GO:0015986,GO:0046933;gbkey=CDS;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001251972.1;locus_tag=PHA56_RS27990;product=F0F1 ATP synthase subunit epsilon;protein_id=WP_004107274.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5935761 5937932 . - . ID=gene-PHA56_RS27995;Name=PHA56_RS27995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS27995;old_locus_tag=PHA56_27995 NZ_CP116214.1 Protein Homology CDS 5935761 5937932 . - 0 ID=cds-WP_038423897.1;Parent=gene-PHA56_RS27995;Dbxref=Genbank:WP_038423897.1;Name=WP_038423897.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016807696.1;locus_tag=PHA56_RS27995;product=right-handed parallel beta-helix repeat-containing protein;protein_id=WP_038423897.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5938278 5939648 . + . ID=gene-PHA56_RS28000;Name=glmU;gbkey=Gene;gene=glmU;gene_biotype=protein_coding;locus_tag=PHA56_RS28000;old_locus_tag=PHA56_28000 NZ_CP116214.1 Protein Homology CDS 5938278 5939648 . + 0 ID=cds-WP_038423896.1;Parent=gene-PHA56_RS28000;Dbxref=Genbank:WP_038423896.1;Name=WP_038423896.1;Ontology_term=GO:0000902,GO:0006048,GO:0009252,GO:0000287,GO:0003977,GO:0019134;gbkey=CDS;gene=glmU;go_function=magnesium ion binding|0000287||IEA,UDP-N-acetylglucosamine diphosphorylase activity|0003977||IEA,glucosamine-1-phosphate N-acetyltransferase activity|0019134||IEA;go_process=cell morphogenesis|0000902||IEA,UDP-N-acetylglucosamine biosynthetic process|0006048||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229602.1;locus_tag=PHA56_RS28000;product=bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU;protein_id=WP_038423896.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5939831 5941660 . + . ID=gene-PHA56_RS28005;Name=glmS;gbkey=Gene;gene=glmS;gene_biotype=protein_coding;locus_tag=PHA56_RS28005;old_locus_tag=PHA56_28005 NZ_CP116214.1 Protein Homology CDS 5939831 5941660 . + 0 ID=cds-WP_009652734.1;Parent=gene-PHA56_RS28005;Dbxref=Genbank:WP_009652734.1;Name=WP_009652734.1;Ontology_term=GO:0006040,GO:0009252,GO:0004360;gbkey=CDS;gene=glmS;go_function=glutamine-fructose-6-phosphate transaminase (isomerizing) activity|0004360||IEA;go_process=amino sugar metabolic process|0006040||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121462.1;locus_tag=PHA56_RS28005;product=glutamine--fructose-6-phosphate transaminase (isomerizing);protein_id=WP_009652734.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5941977 5943017 . + . ID=gene-PHA56_RS28010;Name=pstS;gbkey=Gene;gene=pstS;gene_biotype=protein_coding;locus_tag=PHA56_RS28010;old_locus_tag=PHA56_28010 NZ_CP116214.1 Protein Homology CDS 5941977 5943017 . + 0 ID=cds-WP_038423895.1;Parent=gene-PHA56_RS28010;Dbxref=Genbank:WP_038423895.1;Name=WP_038423895.1;Ontology_term=GO:0035435,GO:0042301,GO:0043190;gbkey=CDS;gene=pstS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=phosphate ion binding|0042301||IEA;go_process=phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229600.1;locus_tag=PHA56_RS28010;product=phosphate ABC transporter substrate-binding protein PstS;protein_id=WP_038423895.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5943210 5944169 . + . ID=gene-PHA56_RS28015;Name=pstC;gbkey=Gene;gene=pstC;gene_biotype=protein_coding;locus_tag=PHA56_RS28015;old_locus_tag=PHA56_28015 NZ_CP116214.1 Protein Homology CDS 5943210 5944169 . + 0 ID=cds-WP_004107261.1;Parent=gene-PHA56_RS28015;Dbxref=Genbank:WP_004107261.1;Name=WP_004107261.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=pstC;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008806729.1;locus_tag=PHA56_RS28015;product=phosphate ABC transporter permease PstC;protein_id=WP_004107261.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5944169 5945059 . + . ID=gene-PHA56_RS28020;Name=pstA;gbkey=Gene;gene=pstA;gene_biotype=protein_coding;locus_tag=PHA56_RS28020;old_locus_tag=PHA56_28020 NZ_CP116214.1 Protein Homology CDS 5944169 5945059 . + 0 ID=cds-WP_004855748.1;Parent=gene-PHA56_RS28020;Dbxref=Genbank:WP_004855748.1;Name=WP_004855748.1;Ontology_term=GO:0035435,GO:0005886;gbkey=CDS;gene=pstA;go_component=plasma membrane|0005886||IEA;go_process=phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229598.1;locus_tag=PHA56_RS28020;product=phosphate ABC transporter permease PstA;protein_id=WP_004855748.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5945107 5945880 . + . ID=gene-PHA56_RS28025;Name=pstB;gbkey=Gene;gene=pstB;gene_biotype=protein_coding;locus_tag=PHA56_RS28025;old_locus_tag=PHA56_28025 NZ_CP116214.1 Protein Homology CDS 5945107 5945880 . + 0 ID=cds-WP_004855746.1;Parent=gene-PHA56_RS28025;Dbxref=Genbank:WP_004855746.1;Name=WP_004855746.1;Ontology_term=GO:0005524,GO:0015415,GO:0009898,GO:0055052;gbkey=CDS;gene=pstB;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000063125.1;locus_tag=PHA56_RS28025;product=phosphate ABC transporter ATP-binding protein PstB;protein_id=WP_004855746.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5945930 5946655 . + . ID=gene-PHA56_RS28030;Name=phoU;gbkey=Gene;gene=phoU;gene_biotype=protein_coding;locus_tag=PHA56_RS28030;old_locus_tag=PHA56_28030 NZ_CP116214.1 Protein Homology CDS 5945930 5946655 . + 0 ID=cds-WP_004107251.1;Parent=gene-PHA56_RS28030;Dbxref=Genbank:WP_004107251.1;Name=WP_004107251.1;Ontology_term=GO:0030643;gbkey=CDS;gene=phoU;go_process=cellular phosphate ion homeostasis|0030643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229596.1;locus_tag=PHA56_RS28030;product=phosphate signaling complex protein PhoU;protein_id=WP_004107251.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5947240 5948886 . + . ID=gene-PHA56_RS28035;Name=PHA56_RS28035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28035;old_locus_tag=PHA56_28035 NZ_CP116214.1 Protein Homology CDS 5947240 5948886 . + 0 ID=cds-WP_119834557.1;Parent=gene-PHA56_RS28035;Dbxref=Genbank:WP_119834557.1;Name=WP_119834557.1;Ontology_term=GO:0034219,GO:0015288,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=porin activity|0015288||IEA;go_process=carbohydrate transmembrane transport|0034219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229594.1;locus_tag=PHA56_RS28035;product=carbohydrate porin;protein_id=WP_119834557.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5948928 5950094 . + . ID=gene-PHA56_RS28040;Name=PHA56_RS28040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28040;old_locus_tag=PHA56_28040 NZ_CP116214.1 Protein Homology CDS 5948928 5950094 . + 0 ID=cds-WP_076752434.1;Parent=gene-PHA56_RS28040;Dbxref=Genbank:WP_076752434.1;Name=WP_076752434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016946150.1;locus_tag=PHA56_RS28040;product=alpha/beta hydrolase-fold protein;protein_id=WP_076752434.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5950149 5950871 . + . ID=gene-PHA56_RS28045;Name=PHA56_RS28045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28045;old_locus_tag=PHA56_28045 NZ_CP116214.1 Protein Homology CDS 5950149 5950871 . + 0 ID=cds-WP_014227343.1;Parent=gene-PHA56_RS28045;Dbxref=Genbank:WP_014227343.1;Name=WP_014227343.1;Ontology_term=GO:0006044,GO:0004342;gbkey=CDS;go_function=glucosamine-6-phosphate deaminase activity|0004342||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014227343.1;locus_tag=PHA56_RS28045;product=glucosamine-6-phosphate deaminase;protein_id=WP_014227343.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5950927 5951592 . - . ID=gene-PHA56_RS28050;Name=yieH;gbkey=Gene;gene=yieH;gene_biotype=protein_coding;locus_tag=PHA56_RS28050;old_locus_tag=PHA56_28050 NZ_CP116214.1 Protein Homology CDS 5950927 5951592 . - 0 ID=cds-WP_032718760.1;Parent=gene-PHA56_RS28050;Dbxref=Genbank:WP_032718760.1;Name=WP_032718760.1;gbkey=CDS;gene=yieH;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229590.1;locus_tag=PHA56_RS28050;product=6-phosphogluconate phosphatase;protein_id=WP_032718760.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5951760 5953097 . + . ID=gene-PHA56_RS28055;Name=adeP;gbkey=Gene;gene=adeP;gene_biotype=protein_coding;locus_tag=PHA56_RS28055;old_locus_tag=PHA56_28055 NZ_CP116214.1 Protein Homology CDS 5951760 5953097 . + 0 ID=cds-WP_014839859.1;Parent=gene-PHA56_RS28055;Dbxref=Genbank:WP_014839859.1;Name=WP_014839859.1;gbkey=CDS;gene=adeP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229588.1;locus_tag=PHA56_RS28055;product=adenine permease AdeP;protein_id=WP_014839859.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5953146 5953712 . - . ID=gene-PHA56_RS28060;Name=PHA56_RS28060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28060;old_locus_tag=PHA56_28060 NZ_CP116214.1 Protein Homology CDS 5953146 5953712 . - 0 ID=cds-WP_004855733.1;Parent=gene-PHA56_RS28060;Dbxref=Genbank:WP_004855733.1;Name=WP_004855733.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229587.1;locus_tag=PHA56_RS28060;product=NADPH-dependent FMN reductase;protein_id=WP_004855733.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5953750 5954487 . - . ID=gene-PHA56_RS28065;Name=PHA56_RS28065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28065;old_locus_tag=PHA56_28065 NZ_CP116214.1 Protein Homology CDS 5953750 5954487 . - 0 ID=cds-WP_014227339.1;Parent=gene-PHA56_RS28065;Dbxref=Genbank:WP_014227339.1;Name=WP_014227339.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004151542.1;locus_tag=PHA56_RS28065;product=hypothetical protein;protein_id=WP_014227339.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5954634 5955593 . - . ID=gene-PHA56_RS28070;Name=yidZ;gbkey=Gene;gene=yidZ;gene_biotype=protein_coding;locus_tag=PHA56_RS28070;old_locus_tag=PHA56_28070 NZ_CP116214.1 Protein Homology CDS 5954634 5955593 . - 0 ID=cds-WP_014839857.1;Parent=gene-PHA56_RS28070;Dbxref=Genbank:WP_014839857.1;Name=WP_014839857.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=yidZ;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229585.1;locus_tag=PHA56_RS28070;product=HTH-type transcriptional regulator YidZ;protein_id=WP_014839857.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5955562 5956746 . - . ID=gene-PHA56_RS28075;Name=PHA56_RS28075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28075;old_locus_tag=PHA56_28075 NZ_CP116214.1 Protein Homology CDS 5955562 5956746 . - 0 ID=cds-WP_032694284.1;Parent=gene-PHA56_RS28075;Dbxref=Genbank:WP_032694284.1;Name=WP_032694284.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015585461.1;locus_tag=PHA56_RS28075;product=MFS transporter;protein_id=WP_032694284.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5956926 5957333 . - . ID=gene-PHA56_RS28080;Name=PHA56_RS28080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28080;old_locus_tag=PHA56_28080 NZ_CP116214.1 Protein Homology CDS 5956926 5957333 . - 0 ID=cds-WP_014227336.1;Parent=gene-PHA56_RS28080;Dbxref=Genbank:WP_014227336.1;Name=WP_014227336.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004855722.1;locus_tag=PHA56_RS28080;product=GNAT family N-acetyltransferase;protein_id=WP_014227336.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5957467 5958831 . - . ID=gene-PHA56_RS28085;Name=mnmE;gbkey=Gene;gene=mnmE;gene_biotype=protein_coding;locus_tag=PHA56_RS28085;old_locus_tag=PHA56_28085 NZ_CP116214.1 Protein Homology CDS 5957467 5958831 . - 0 ID=cds-WP_038423892.1;Parent=gene-PHA56_RS28085;Dbxref=Genbank:WP_038423892.1;Name=WP_038423892.1;Ontology_term=GO:0006400,GO:0003924,GO:0005515,GO:0005525;gbkey=CDS;gene=mnmE;go_function=GTPase activity|0003924||IEA,protein binding|0005515||IEA,GTP binding|0005525||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462743.1;locus_tag=PHA56_RS28085;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE;protein_id=WP_038423892.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5958925 5960571 . - . ID=gene-PHA56_RS28090;Name=yidC;gbkey=Gene;gene=yidC;gene_biotype=protein_coding;locus_tag=PHA56_RS28090;old_locus_tag=PHA56_28090 NZ_CP116214.1 Protein Homology CDS 5958925 5960571 . - 0 ID=cds-WP_004855708.1;Parent=gene-PHA56_RS28090;Dbxref=Genbank:WP_004855708.1;Name=WP_004855708.1;Ontology_term=GO:0032977,GO:0016020;gbkey=CDS;gene=yidC;go_component=membrane|0016020||IEA;go_function=membrane insertase activity|0032977||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462742.1;locus_tag=PHA56_RS28090;product=membrane protein insertase YidC;protein_id=WP_004855708.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5960574 5960831 . - . ID=gene-PHA56_RS28095;Name=yidD;gbkey=Gene;gene=yidD;gene_biotype=protein_coding;locus_tag=PHA56_RS28095;old_locus_tag=PHA56_28095 NZ_CP116214.1 Protein Homology CDS 5960574 5960831 . - 0 ID=cds-WP_004871831.1;Parent=gene-PHA56_RS28095;Dbxref=Genbank:WP_004871831.1;Name=WP_004871831.1;gbkey=CDS;gene=yidD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462741.1;locus_tag=PHA56_RS28095;product=membrane protein insertion efficiency factor YidD;protein_id=WP_004871831.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5960795 5961154 . - . ID=gene-PHA56_RS28100;Name=rnpA;gbkey=Gene;gene=rnpA;gene_biotype=protein_coding;locus_tag=PHA56_RS28100;old_locus_tag=PHA56_28100 NZ_CP116214.1 Protein Homology CDS 5960795 5961154 . - 0 ID=cds-WP_004871829.1;Parent=gene-PHA56_RS28100;Dbxref=Genbank:WP_004871829.1;Name=WP_004871829.1;Ontology_term=GO:0006396,GO:0004526;gbkey=CDS;gene=rnpA;go_function=ribonuclease P activity|0004526||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014172301.1;locus_tag=PHA56_RS28100;product=ribonuclease P protein component;protein_id=WP_004871829.1;transl_table=11 NZ_CP116214.1 RefSeq gene 5961170 5961310 . - . ID=gene-PHA56_RS28105;Name=rpmH;gbkey=Gene;gene=rpmH;gene_biotype=protein_coding;locus_tag=PHA56_RS28105;old_locus_tag=PHA56_28105 NZ_CP116214.1 Protein Homology CDS 5961170 5961310 . - 0 ID=cds-WP_004871828.1;Parent=gene-PHA56_RS28105;Dbxref=Genbank:WP_004871828.1;Name=WP_004871828.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmH;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001686914.1;locus_tag=PHA56_RS28105;product=50S ribosomal protein L34;protein_id=WP_004871828.1;transl_table=11 ##sequence-region NZ_CP116215.1 1 362448 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1134687 NZ_CP116215.1 RefSeq region 1 362448 . + . ID=NZ_CP116215.1:1..362448;Dbxref=taxon:1134687;Is_circular=true;Name=p2562_1;collection-date=2018;country=China: Hangzhou;gbkey=Src;genome=plasmid;isolation-source=sputum;mol_type=genomic DNA;nat-host=Homo sapiens;plasmid-name=p2562_1;strain=2563 NZ_CP116215.1 RefSeq gene 1 1089 . + . ID=gene-PHA56_RS28110;Name=PHA56_RS28110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28110;old_locus_tag=PHA56_28110 NZ_CP116215.1 Protein Homology CDS 1 1089 . + 0 ID=cds-WP_004181841.1;Parent=gene-PHA56_RS28110;Dbxref=Genbank:WP_004181841.1;Name=WP_004181841.1;Ontology_term=GO:0006270,GO:0003887;gbkey=CDS;go_function=DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication initiation|0006270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004181841.1;locus_tag=PHA56_RS28110;product=RepB family plasmid replication initiator protein;protein_id=WP_004181841.1;transl_table=11 NZ_CP116215.1 RefSeq gene 3197 4177 . + . ID=gene-PHA56_RS28115;Name=PHA56_RS28115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28115;old_locus_tag=PHA56_28115 NZ_CP116215.1 Protein Homology CDS 3197 4177 . + 0 ID=cds-WP_135726817.1;Parent=gene-PHA56_RS28115;Dbxref=Genbank:WP_135726817.1;Name=WP_135726817.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414793.2;locus_tag=PHA56_RS28115;product=IS5-like element ISKpn26 family transposase;protein_id=WP_135726817.1;transl_table=11 NZ_CP116215.1 RefSeq gene 4459 5637 . - . ID=gene-PHA56_RS28120;Name=PHA56_RS28120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28120;old_locus_tag=PHA56_28120 NZ_CP116215.1 Protein Homology CDS 4459 5637 . - 0 ID=cds-WP_032416088.1;Parent=gene-PHA56_RS28120;Dbxref=Genbank:WP_032416088.1;Name=WP_032416088.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011666578.1;locus_tag=PHA56_RS28120;product=GIY-YIG nuclease family protein;protein_id=WP_032416088.1;transl_table=11 NZ_CP116215.1 RefSeq gene 5630 7675 . - . ID=gene-PHA56_RS28125;Name=PHA56_RS28125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28125;old_locus_tag=PHA56_28125 NZ_CP116215.1 Protein Homology CDS 5630 7675 . - 0 ID=cds-WP_032669192.1;Parent=gene-PHA56_RS28125;Dbxref=Genbank:WP_032669192.1;Name=WP_032669192.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004541851.1;locus_tag=PHA56_RS28125;product=DEAD/DEAH box helicase;protein_id=WP_032669192.1;transl_table=11 NZ_CP116215.1 RefSeq gene 7690 10452 . - . ID=gene-PHA56_RS28130;Name=PHA56_RS28130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28130;old_locus_tag=PHA56_28130 NZ_CP116215.1 Protein Homology CDS 7690 10452 . - 0 ID=cds-WP_032670757.1;Parent=gene-PHA56_RS28130;Dbxref=Genbank:WP_032670757.1;Name=WP_032670757.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017113199.1;locus_tag=PHA56_RS28130;product=class I SAM-dependent DNA methyltransferase;protein_id=WP_032670757.1;transl_table=11 NZ_CP116215.1 RefSeq pseudogene 10821 12026 . - . ID=gene-PHA56_RS28135;Name=PHA56_RS28135;end_range=12026,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS28135;old_locus_tag=PHA56_28135;partial=true;pseudo=true NZ_CP116215.1 Protein Homology CDS 10821 12026 . - 0 ID=cds-PHA56_RS28135;Parent=gene-PHA56_RS28135;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;end_range=12026,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000998048.1;locus_tag=PHA56_RS28135;partial=true;product=IS66 family transposase;pseudo=true;transl_table=11 NZ_CP116215.1 RefSeq pseudogene 12023 12250 . - . ID=gene-PHA56_RS28140;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=pseudogene;locus_tag=PHA56_RS28140;old_locus_tag=PHA56_28140;partial=true;pseudo=true;start_range=.,12023 NZ_CP116215.1 Protein Homology CDS 12023 12250 . - 0 ID=cds-PHA56_RS28140;Parent=gene-PHA56_RS28140;Note=TnpB%2C as the term is used for proteins encoded by IS66 family insertion elements%2C is considered an accessory protein%2C since TnpC%2C encoded by a neighboring gene%2C is a DDE family transposase.%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=tnpB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001536669.1;locus_tag=PHA56_RS28140;partial=true;product=IS66 family insertion sequence element accessory protein TnpB;pseudo=true;start_range=.,12023;transl_table=11 NZ_CP116215.1 RefSeq gene 12910 13785 . + . ID=gene-PHA56_RS28145;Name=PHA56_RS28145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28145;old_locus_tag=PHA56_28145 NZ_CP116215.1 Protein Homology CDS 12910 13785 . + 0 ID=cds-WP_042944383.1;Parent=gene-PHA56_RS28145;Dbxref=Genbank:WP_042944383.1;Name=WP_042944383.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000165430.1;locus_tag=PHA56_RS28145;product=GTPase family protein;protein_id=WP_042944383.1;transl_table=11 NZ_CP116215.1 RefSeq gene 14046 14759 . + . ID=gene-PHA56_RS28150;Name=PHA56_RS28150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28150;old_locus_tag=PHA56_28150 NZ_CP116215.1 Protein Homology CDS 14046 14759 . + 0 ID=cds-WP_042944385.1;Parent=gene-PHA56_RS28150;Dbxref=Genbank:WP_042944385.1;Name=WP_042944385.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000189408.1;locus_tag=PHA56_RS28150;product=WYL domain-containing protein;protein_id=WP_042944385.1;transl_table=11 NZ_CP116215.1 RefSeq gene 14761 14904 . + . ID=gene-PHA56_RS28155;Name=PHA56_RS28155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28155;old_locus_tag=PHA56_28155 NZ_CP116215.1 Protein Homology CDS 14761 14904 . + 0 ID=cds-WP_165821571.1;Parent=gene-PHA56_RS28155;Dbxref=Genbank:WP_165821571.1;Name=WP_165821571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001458941.1;locus_tag=PHA56_RS28155;product=hypothetical protein;protein_id=WP_165821571.1;transl_table=11 NZ_CP116215.1 RefSeq gene 14916 15131 . + . ID=gene-PHA56_RS28160;Name=PHA56_RS28160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28160;old_locus_tag=PHA56_28160 NZ_CP116215.1 Protein Homology CDS 14916 15131 . + 0 ID=cds-WP_042944388.1;Parent=gene-PHA56_RS28160;Dbxref=Genbank:WP_042944388.1;Name=WP_042944388.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000508241.1;locus_tag=PHA56_RS28160;product=hypothetical protein;protein_id=WP_042944388.1;transl_table=11 NZ_CP116215.1 RefSeq gene 15181 16128 . + . ID=gene-PHA56_RS28165;Name=PHA56_RS28165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28165;old_locus_tag=PHA56_28165 NZ_CP116215.1 Protein Homology CDS 15181 16128 . + 0 ID=cds-WP_227654180.1;Parent=gene-PHA56_RS28165;Dbxref=Genbank:WP_227654180.1;Name=WP_227654180.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013991368.1;locus_tag=PHA56_RS28165;product=Ivy family c-type lysozyme inhibitor;protein_id=WP_227654180.1;transl_table=11 NZ_CP116215.1 RefSeq gene 16216 16449 . + . ID=gene-PHA56_RS28170;Name=PHA56_RS28170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28170;old_locus_tag=PHA56_28170 NZ_CP116215.1 Protein Homology CDS 16216 16449 . + 0 ID=cds-WP_070083065.1;Parent=gene-PHA56_RS28170;Dbxref=Genbank:WP_070083065.1;Name=WP_070083065.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001362658.1;locus_tag=PHA56_RS28170;product=DUF905 domain-containing protein;protein_id=WP_070083065.1;transl_table=11 NZ_CP116215.1 RefSeq gene 16616 17893 . - . ID=gene-PHA56_RS28175;Name=PHA56_RS28175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28175;old_locus_tag=PHA56_28175 NZ_CP116215.1 Protein Homology CDS 16616 17893 . - 0 ID=cds-WP_070083064.1;Parent=gene-PHA56_RS28175;Dbxref=Genbank:WP_070083064.1;Name=WP_070083064.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611418.1;locus_tag=PHA56_RS28175;product=ISL3 family transposase;protein_id=WP_070083064.1;transl_table=11 NZ_CP116215.1 RefSeq gene 17906 18940 . - . ID=gene-PHA56_RS28180;Name=PHA56_RS28180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28180;old_locus_tag=PHA56_28180 NZ_CP116215.1 Protein Homology CDS 17906 18940 . - 0 ID=cds-WP_070083063.1;Parent=gene-PHA56_RS28180;Dbxref=Genbank:WP_070083063.1;Name=WP_070083063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016658919.1;locus_tag=PHA56_RS28180;product=permease;protein_id=WP_070083063.1;transl_table=11 NZ_CP116215.1 RefSeq gene 19052 19366 . + . ID=gene-PHA56_RS28185;Name=PHA56_RS28185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28185;old_locus_tag=PHA56_28185 NZ_CP116215.1 Protein Homology CDS 19052 19366 . + 0 ID=cds-WP_000349485.1;Parent=gene-PHA56_RS28185;Dbxref=Genbank:WP_000349485.1;Name=WP_000349485.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008294170.1;locus_tag=PHA56_RS28185;product=helix-turn-helix domain-containing protein;protein_id=WP_000349485.1;transl_table=11 NZ_CP116215.1 RefSeq gene 19520 19924 . - . ID=gene-PHA56_RS28190;Name=PHA56_RS28190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28190;old_locus_tag=PHA56_28190 NZ_CP116215.1 Protein Homology CDS 19520 19924 . - 0 ID=cds-WP_226650518.1;Parent=gene-PHA56_RS28190;Dbxref=Genbank:WP_226650518.1;Name=WP_226650518.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF014376.2;locus_tag=PHA56_RS28190;product=AraC family ligand binding domain-containing protein;protein_id=WP_226650518.1;transl_table=11 NZ_CP116215.1 RefSeq pseudogene 20054 20884 . + . ID=gene-PHA56_RS28195;Name=cfa;end_range=20884,.;gbkey=Gene;gene=cfa;gene_biotype=pseudogene;locus_tag=PHA56_RS28195;old_locus_tag=PHA56_28195;partial=true;pseudo=true NZ_CP116215.1 Protein Homology CDS 20054 20884 . + 0 ID=cds-PHA56_RS28195;Parent=gene-PHA56_RS28195;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=20884,.;gbkey=CDS;gene=cfa;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003846231.1;locus_tag=PHA56_RS28195;partial=true;product=cyclopropane fatty acyl phospholipid synthase;pseudo=true;transl_table=11 NZ_CP116215.1 RefSeq gene 20948 21652 . + . ID=gene-PHA56_RS28200;Name=PHA56_RS28200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28200;old_locus_tag=PHA56_28200 NZ_CP116215.1 Protein Homology CDS 20948 21652 . + 0 ID=cds-WP_001067855.1;Parent=gene-PHA56_RS28200;Dbxref=Genbank:WP_001067855.1;Name=WP_001067855.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221000.1;locus_tag=PHA56_RS28200;product=IS6-like element IS26 family transposase;protein_id=WP_001067855.1;transl_table=11 NZ_CP116215.1 RefSeq pseudogene 21705 22370 . - . ID=gene-PHA56_RS28205;Name=PHA56_RS28205;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS28205;old_locus_tag=PHA56_28205;partial=true;pseudo=true;start_range=.,21705 NZ_CP116215.1 Protein Homology CDS 21705 22370 . - 0 ID=cds-PHA56_RS28205;Parent=gene-PHA56_RS28205;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001172283.1;locus_tag=PHA56_RS28205;partial=true;product=aldo/keto reductase;pseudo=true;start_range=.,21705;transl_table=11 NZ_CP116215.1 RefSeq gene 22397 23248 . - . ID=gene-PHA56_RS28210;Name=PHA56_RS28210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28210;old_locus_tag=PHA56_28210 NZ_CP116215.1 Protein Homology CDS 22397 23248 . - 0 ID=cds-WP_060544639.1;Parent=gene-PHA56_RS28210;Dbxref=Genbank:WP_060544639.1;Name=WP_060544639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001195265.1;locus_tag=PHA56_RS28210;product=aldo/keto reductase;protein_id=WP_060544639.1;transl_table=11 NZ_CP116215.1 RefSeq gene 23492 24556 . - . ID=gene-PHA56_RS28215;Name=PHA56_RS28215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28215;old_locus_tag=PHA56_28215 NZ_CP116215.1 Protein Homology CDS 23492 24556 . - 0 ID=cds-WP_070083058.1;Parent=gene-PHA56_RS28215;Dbxref=Genbank:WP_070083058.1;Name=WP_070083058.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007885537.1;locus_tag=PHA56_RS28215;product=alpha/beta fold hydrolase;protein_id=WP_070083058.1;transl_table=11 NZ_CP116215.1 RefSeq gene 24664 25248 . - . ID=gene-PHA56_RS28220;Name=PHA56_RS28220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28220;old_locus_tag=PHA56_28220 NZ_CP116215.1 Protein Homology CDS 24664 25248 . - 0 ID=cds-WP_060544637.1;Parent=gene-PHA56_RS28220;Dbxref=Genbank:WP_060544637.1;Name=WP_060544637.1;Ontology_term=GO:0010181;gbkey=CDS;go_function=FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818640.1;locus_tag=PHA56_RS28220;product=flavodoxin;protein_id=WP_060544637.1;transl_table=11 NZ_CP116215.1 RefSeq gene 25258 26019 . - . ID=gene-PHA56_RS28225;Name=PHA56_RS28225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28225;old_locus_tag=PHA56_28225 NZ_CP116215.1 Protein Homology CDS 25258 26019 . - 0 ID=cds-WP_060544636.1;Parent=gene-PHA56_RS28225;Dbxref=Genbank:WP_060544636.1;Name=WP_060544636.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818641.1;locus_tag=PHA56_RS28225;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_060544636.1;transl_table=11 NZ_CP116215.1 RefSeq gene 25997 26476 . - . ID=gene-PHA56_RS28230;Name=PHA56_RS28230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28230;old_locus_tag=PHA56_28230 NZ_CP116215.1 Protein Homology CDS 25997 26476 . - 0 ID=cds-WP_060544635.1;Parent=gene-PHA56_RS28230;Dbxref=Genbank:WP_060544635.1;Name=WP_060544635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008815061.1;locus_tag=PHA56_RS28230;product=cupin domain-containing protein;protein_id=WP_060544635.1;transl_table=11 NZ_CP116215.1 RefSeq gene 26541 27998 . - . ID=gene-PHA56_RS28235;Name=PHA56_RS28235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28235;old_locus_tag=PHA56_28235 NZ_CP116215.1 Protein Homology CDS 26541 27998 . - 0 ID=cds-WP_060544649.1;Parent=gene-PHA56_RS28235;Dbxref=Genbank:WP_060544649.1;Name=WP_060544649.1;Ontology_term=GO:0000160,GO:0016310,GO:0000155,GO:0004673,GO:0016772,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000920032.1;locus_tag=PHA56_RS28235;product=heavy metal sensor histidine kinase;protein_id=WP_060544649.1;transl_table=11 NZ_CP116215.1 RefSeq gene 28014 28694 . - . ID=gene-PHA56_RS28240;Name=PHA56_RS28240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28240;old_locus_tag=PHA56_28240 NZ_CP116215.1 Protein Homology CDS 28014 28694 . - 0 ID=cds-WP_060544634.1;Parent=gene-PHA56_RS28240;Dbxref=Genbank:WP_060544634.1;Name=WP_060544634.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226766.1;locus_tag=PHA56_RS28240;product=heavy metal response regulator transcription factor;protein_id=WP_060544634.1;transl_table=11 NZ_CP116215.1 RefSeq gene 28709 29875 . - . ID=gene-PHA56_RS28245;Name=PHA56_RS28245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28245;old_locus_tag=PHA56_28245 NZ_CP116215.1 Protein Homology CDS 28709 29875 . - 0 ID=cds-WP_172970609.1;Parent=gene-PHA56_RS28245;Dbxref=Genbank:WP_172970609.1;Name=WP_172970609.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020303486.1;locus_tag=PHA56_RS28245;product=aldo/keto reductase;protein_id=WP_172970609.1;transl_table=11 NZ_CP116215.1 RefSeq gene 30126 31175 . + . ID=gene-PHA56_RS28250;Name=PHA56_RS28250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28250;old_locus_tag=PHA56_28250 NZ_CP116215.1 Protein Homology CDS 30126 31175 . + 0 ID=cds-WP_021571251.1;Parent=gene-PHA56_RS28250;Dbxref=Genbank:WP_021571251.1;Name=WP_021571251.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019082642.1;locus_tag=PHA56_RS28250;product=alpha/beta hydrolase;protein_id=WP_021571251.1;transl_table=11 NZ_CP116215.1 RefSeq gene 31435 32115 . + . ID=gene-PHA56_RS28255;Name=PHA56_RS28255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28255;old_locus_tag=PHA56_28255 NZ_CP116215.1 Protein Homology CDS 31435 32115 . + 0 ID=cds-WP_070083056.1;Parent=gene-PHA56_RS28255;Dbxref=Genbank:WP_070083056.1;Name=WP_070083056.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007885543.1;locus_tag=PHA56_RS28255;product=nitroreductase;protein_id=WP_070083056.1;transl_table=11 NZ_CP116215.1 RefSeq pseudogene 32123 32566 . - . ID=gene-PHA56_RS28260;Name=PHA56_RS28260;end_range=32566,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS28260;old_locus_tag=PHA56_28260;partial=true;pseudo=true NZ_CP116215.1 Protein Homology CDS 32123 32566 . - 0 ID=cds-PHA56_RS28260;Parent=gene-PHA56_RS28260;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=32566,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226762.1;locus_tag=PHA56_RS28260;partial=true;product=Bcr/CflA family drug resistance efflux transporter;pseudo=true;transl_table=11 NZ_CP116215.1 RefSeq gene 32639 33759 . + . ID=gene-PHA56_RS28265;Name=PHA56_RS28265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28265;old_locus_tag=PHA56_28265 NZ_CP116215.1 Protein Homology CDS 32639 32897 . + 0 ID=cds-WP_085956072.1-5;Parent=gene-PHA56_RS28265;Dbxref=Genbank:WP_085956072.1;Name=WP_085956072.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611473.1;locus_tag=PHA56_RS28265;product=IS3-like element ISKpn34 family transposase;protein_id=WP_085956072.1;transl_table=11 NZ_CP116215.1 Protein Homology CDS 32897 33759 . + 2 ID=cds-WP_085956072.1-5;Parent=gene-PHA56_RS28265;Dbxref=Genbank:WP_085956072.1;Name=WP_085956072.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611473.1;locus_tag=PHA56_RS28265;product=IS3-like element ISKpn34 family transposase;protein_id=WP_085956072.1;transl_table=11 NZ_CP116215.1 RefSeq pseudogene 33789 34550 . - . ID=gene-PHA56_RS28270;Name=PHA56_RS28270;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS28270;old_locus_tag=PHA56_28270;partial=true;pseudo=true;start_range=.,33789 NZ_CP116215.1 Protein Homology CDS 33789 34550 . - 0 ID=cds-PHA56_RS28270;Parent=gene-PHA56_RS28270;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226762.1;locus_tag=PHA56_RS28270;partial=true;product=multidrug effflux MFS transporter;pseudo=true;start_range=.,33789;transl_table=11 NZ_CP116215.1 RefSeq gene 35271 36809 . - . ID=gene-PHA56_RS28275;Name=PHA56_RS28275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28275;old_locus_tag=PHA56_28275 NZ_CP116215.1 Protein Homology CDS 35271 36809 . - 0 ID=cds-WP_070083054.1;Parent=gene-PHA56_RS28275;Dbxref=Genbank:WP_070083054.1;Name=WP_070083054.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000998048.1;locus_tag=PHA56_RS28275;product=IS66 family transposase;protein_id=WP_070083054.1;transl_table=11 NZ_CP116215.1 RefSeq gene 36859 37206 . - . ID=gene-PHA56_RS28280;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=protein_coding;locus_tag=PHA56_RS28280;old_locus_tag=PHA56_28280 NZ_CP116215.1 Protein Homology CDS 36859 37206 . - 0 ID=cds-WP_070083053.1;Parent=gene-PHA56_RS28280;Dbxref=Genbank:WP_070083053.1;Name=WP_070083053.1;Note=TnpB%2C as the term is used for proteins encoded by IS66 family insertion elements%2C is considered an accessory protein%2C since TnpC%2C encoded by a neighboring gene%2C is a DDE family transposase.;gbkey=CDS;gene=tnpB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004966400.1;locus_tag=PHA56_RS28280;product=IS66 family insertion sequence element accessory protein TnpB;protein_id=WP_070083053.1;transl_table=11 NZ_CP116215.1 RefSeq gene 37404 37580 . - . ID=gene-PHA56_RS28285;Name=PHA56_RS28285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28285;old_locus_tag=PHA56_28285 NZ_CP116215.1 Protein Homology CDS 37404 37580 . - 0 ID=cds-WP_135725239.1;Parent=gene-PHA56_RS28285;Dbxref=Genbank:WP_135725239.1;Name=WP_135725239.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: protein motif:HMM:NF013677.2;locus_tag=PHA56_RS28285;product=transposase;protein_id=WP_135725239.1;transl_table=11 NZ_CP116215.1 RefSeq pseudogene 37672 37863 . - . ID=gene-PHA56_RS28290;Name=PHA56_RS28290;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS28290;old_locus_tag=PHA56_28290;partial=true;pseudo=true;start_range=.,37672 NZ_CP116215.1 Protein Homology CDS 37672 37863 . - 0 ID=cds-PHA56_RS28290;Parent=gene-PHA56_RS28290;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000019445.1;locus_tag=PHA56_RS28290;partial=true;product=IS5/IS1182 family transposase;pseudo=true;start_range=.,37672;transl_table=11 NZ_CP116215.1 RefSeq gene 38027 38887 . - . ID=gene-PHA56_RS28295;Name=PHA56_RS28295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28295;old_locus_tag=PHA56_28295 NZ_CP116215.1 Protein Homology CDS 38027 38887 . - 0 ID=cds-WP_070083051.1;Parent=gene-PHA56_RS28295;Dbxref=Genbank:WP_070083051.1;Name=WP_070083051.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006324343.1;locus_tag=PHA56_RS28295;product=LysR family transcriptional regulator;protein_id=WP_070083051.1;transl_table=11 NZ_CP116215.1 RefSeq pseudogene 38898 40166 . - . ID=gene-PHA56_RS28300;Name=PHA56_RS28300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS28300;old_locus_tag=PHA56_28300;pseudo=true NZ_CP116215.1 Protein Homology CDS 38898 40166 . - 0 ID=cds-PHA56_RS28300;Parent=gene-PHA56_RS28300;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611435.1;locus_tag=PHA56_RS28300;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_CP116215.1 RefSeq pseudogene 40252 41157 . - . ID=gene-PHA56_RS28305;Name=PHA56_RS28305;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS28305;old_locus_tag=PHA56_28305;partial=true;pseudo=true;start_range=.,40252 NZ_CP116215.1 Protein Homology CDS 40252 41157 . - 0 ID=cds-PHA56_RS28305;Parent=gene-PHA56_RS28305;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012561117.1;locus_tag=PHA56_RS28305;partial=true;product=excinuclease ABC subunit A;pseudo=true;start_range=.,40252;transl_table=11 NZ_CP116215.1 RefSeq gene 41404 42720 . - . ID=gene-PHA56_RS28310;Name=PHA56_RS28310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28310;old_locus_tag=PHA56_28310 NZ_CP116215.1 Protein Homology CDS 41404 42720 . - 0 ID=cds-WP_070083048.1;Parent=gene-PHA56_RS28310;Dbxref=Genbank:WP_070083048.1;Name=WP_070083048.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004147486.1;locus_tag=PHA56_RS28310;product=PLP-dependent aminotransferase family protein;protein_id=WP_070083048.1;transl_table=11 NZ_CP116215.1 RefSeq gene 42878 43288 . + . ID=gene-PHA56_RS28315;Name=PHA56_RS28315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28315;old_locus_tag=PHA56_28315 NZ_CP116215.1 Protein Homology CDS 42878 43288 . + 0 ID=cds-WP_070083047.1;Parent=gene-PHA56_RS28315;Dbxref=Genbank:WP_070083047.1;Name=WP_070083047.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_252894.1;locus_tag=PHA56_RS28315;product=DoxX family protein;protein_id=WP_070083047.1;transl_table=11 NZ_CP116215.1 RefSeq gene 43414 44022 . + . ID=gene-PHA56_RS28320;Name=PHA56_RS28320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28320;old_locus_tag=PHA56_28320 NZ_CP116215.1 Protein Homology CDS 43414 44022 . + 0 ID=cds-WP_070083046.1;Parent=gene-PHA56_RS28320;Dbxref=Genbank:WP_070083046.1;Name=WP_070083046.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017907385.1;locus_tag=PHA56_RS28320;product=ATP-dependent Clp protease proteolytic subunit;protein_id=WP_070083046.1;transl_table=11 NZ_CP116215.1 RefSeq gene 44216 44815 . + . ID=gene-PHA56_RS28325;Name=PHA56_RS28325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28325;old_locus_tag=PHA56_28325 NZ_CP116215.1 Protein Homology CDS 44216 44815 . + 0 ID=cds-WP_023283488.1;Parent=gene-PHA56_RS28325;Dbxref=Genbank:WP_023283488.1;Name=WP_023283488.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019407667.1;locus_tag=PHA56_RS28325;product=LysE family translocator;protein_id=WP_023283488.1;transl_table=11 NZ_CP116215.1 RefSeq gene 44888 45919 . - . ID=gene-PHA56_RS28330;Name=PHA56_RS28330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28330;old_locus_tag=PHA56_28330 NZ_CP116215.1 Protein Homology CDS 44888 45919 . - 0 ID=cds-WP_070083045.1;Parent=gene-PHA56_RS28330;Dbxref=Genbank:WP_070083045.1;Name=WP_070083045.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001395480.1;locus_tag=PHA56_RS28330;product=IS630-like element ISEc33 family transposase;protein_id=WP_070083045.1;transl_table=11 NZ_CP116215.1 RefSeq gene 46042 46338 . + . ID=gene-PHA56_RS28335;Name=PHA56_RS28335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28335;old_locus_tag=PHA56_28335 NZ_CP116215.1 Protein Homology CDS 46042 46338 . + 0 ID=cds-WP_077270230.1;Parent=gene-PHA56_RS28335;Dbxref=Genbank:WP_077270230.1;Name=WP_077270230.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: protein motif:HMM:NF024809.2;locus_tag=PHA56_RS28335;product=glutathione S-transferase N-terminal domain-containing protein;protein_id=WP_077270230.1;transl_table=11 NZ_CP116215.1 RefSeq gene 46349 46747 . + . ID=gene-PHA56_RS28340;Name=PHA56_RS28340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28340;old_locus_tag=PHA56_28340 NZ_CP116215.1 GeneMarkS-2+ CDS 46349 46747 . + 0 ID=cds-WP_033128602.1;Parent=gene-PHA56_RS28340;Dbxref=Genbank:WP_033128602.1;Name=WP_033128602.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PHA56_RS28340;product=hypothetical protein;protein_id=WP_033128602.1;transl_table=11 NZ_CP116215.1 RefSeq gene 46835 47833 . - . ID=gene-PHA56_RS28345;Name=PHA56_RS28345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28345;old_locus_tag=PHA56_28345 NZ_CP116215.1 Protein Homology CDS 46835 47833 . - 0 ID=cds-WP_070083044.1;Parent=gene-PHA56_RS28345;Dbxref=Genbank:WP_070083044.1;Name=WP_070083044.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004866230.1;locus_tag=PHA56_RS28345;product=nitrilase family protein;protein_id=WP_070083044.1;transl_table=11 NZ_CP116215.1 RefSeq pseudogene 48026 48594 . + . ID=gene-PHA56_RS28350;Name=PHA56_RS28350;end_range=48594,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS28350;old_locus_tag=PHA56_28350;partial=true;pseudo=true NZ_CP116215.1 Protein Homology CDS 48026 48594 . + 0 ID=cds-PHA56_RS28350;Parent=gene-PHA56_RS28350;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=48594,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611134.1;locus_tag=PHA56_RS28350;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP116215.1 RefSeq pseudogene 48601 49635 . - . ID=gene-PHA56_RS28355;Name=PHA56_RS28355;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS28355;old_locus_tag=PHA56_28355;partial=true;pseudo=true;start_range=.,48601 NZ_CP116215.1 Protein Homology CDS 48601 49635 . - 0 ID=cds-PHA56_RS28355;Parent=gene-PHA56_RS28355;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004152817.1;locus_tag=PHA56_RS28355;partial=true;product=IS481 family transposase;pseudo=true;start_range=.,48601;transl_table=11 NZ_CP116215.1 RefSeq gene 49762 51294 . - . ID=gene-PHA56_RS28360;Name=PHA56_RS28360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28360;old_locus_tag=PHA56_28360 NZ_CP116215.1 Protein Homology CDS 49762 51294 . - 0 ID=cds-WP_022652342.1-2;Parent=gene-PHA56_RS28360;Dbxref=Genbank:WP_022652342.1;Name=WP_022652342.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012218041.1;locus_tag=PHA56_RS28360;product=IS3-like element ISKpn38 family transposase;protein_id=WP_022652342.1;transl_table=11 NZ_CP116215.1 RefSeq gene 51383 52723 . + . ID=gene-PHA56_RS28365;Name=PHA56_RS28365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28365;old_locus_tag=PHA56_28365 NZ_CP116215.1 Protein Homology CDS 51383 52723 . + 0 ID=cds-WP_004196353.1;Parent=gene-PHA56_RS28365;Dbxref=Genbank:WP_004196353.1;Name=WP_004196353.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001481272.1;locus_tag=PHA56_RS28365;product=ISNCY family transposase;protein_id=WP_004196353.1;transl_table=11 NZ_CP116215.1 RefSeq gene 52979 53401 . - . ID=gene-PHA56_RS28370;Name=PHA56_RS28370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28370;old_locus_tag=PHA56_28370 NZ_CP116215.1 Protein Homology CDS 52979 53401 . - 0 ID=cds-WP_032072095.1;Parent=gene-PHA56_RS28370;Dbxref=Genbank:WP_032072095.1;Name=WP_032072095.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_131199603.1;locus_tag=PHA56_RS28370;product=nickel resistance OB fold protein NcrY;protein_id=WP_032072095.1;transl_table=11 NZ_CP116215.1 RefSeq gene 53563 54693 . - . ID=gene-PHA56_RS28375;Name=PHA56_RS28375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28375;old_locus_tag=PHA56_28375 NZ_CP116215.1 Protein Homology CDS 53563 54693 . - 0 ID=cds-WP_004196366.1;Parent=gene-PHA56_RS28375;Dbxref=Genbank:WP_004196366.1;Name=WP_004196366.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004196366.1;locus_tag=PHA56_RS28375;product=Ni(II)/Co(II) efflux transporter permease subunit NcrC;protein_id=WP_004196366.1;transl_table=11 NZ_CP116215.1 RefSeq gene 54706 54975 . - . ID=gene-PHA56_RS28380;Name=PHA56_RS28380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28380;old_locus_tag=PHA56_28380 NZ_CP116215.1 Protein Homology CDS 54706 54975 . - 0 ID=cds-WP_004196355.1;Parent=gene-PHA56_RS28380;Dbxref=Genbank:WP_004196355.1;Name=WP_004196355.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032676615.1;locus_tag=PHA56_RS28380;product=nickel-sensing transcriptional repressor NcrB;protein_id=WP_004196355.1;transl_table=11 NZ_CP116215.1 RefSeq gene 55081 56379 . - . ID=gene-PHA56_RS28385;Name=nirA;gbkey=Gene;gene=nirA;gene_biotype=protein_coding;locus_tag=PHA56_RS28385;old_locus_tag=PHA56_28385 NZ_CP116215.1 Protein Homology CDS 55081 56379 . - 0 ID=cds-WP_255874664.1;Parent=gene-PHA56_RS28385;Dbxref=Genbank:WP_255874664.1;Name=WP_255874664.1;gbkey=CDS;gene=nirA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_063154576.1;locus_tag=PHA56_RS28385;product=nickel resistance membrane nickel efflux protein NirA;protein_id=WP_255874664.1;transl_table=11 NZ_CP116215.1 RefSeq gene 56613 57371 . - . ID=gene-PHA56_RS28390;Name=PHA56_RS28390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28390;old_locus_tag=PHA56_28390 NZ_CP116215.1 Protein Homology CDS 56613 57371 . - 0 ID=cds-WP_004196325.1;Parent=gene-PHA56_RS28390;Dbxref=Genbank:WP_004196325.1;Name=WP_004196325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004196325.1;locus_tag=PHA56_RS28390;product=hypothetical protein;protein_id=WP_004196325.1;transl_table=11 NZ_CP116215.1 RefSeq gene 57425 58345 . - . ID=gene-PHA56_RS28395;Name=PHA56_RS28395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28395;old_locus_tag=PHA56_28395 NZ_CP116215.1 Protein Homology CDS 57425 58345 . - 0 ID=cds-WP_004196315.1;Parent=gene-PHA56_RS28395;Dbxref=Genbank:WP_004196315.1;Name=WP_004196315.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009651957.1;locus_tag=PHA56_RS28395;product=hypothetical protein;protein_id=WP_004196315.1;transl_table=11 NZ_CP116215.1 RefSeq gene 58408 58779 . - . ID=gene-PHA56_RS28400;Name=PHA56_RS28400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28400;old_locus_tag=PHA56_28400 NZ_CP116215.1 Protein Homology CDS 58408 58779 . - 0 ID=cds-WP_032425553.1;Parent=gene-PHA56_RS28400;Dbxref=Genbank:WP_032425553.1;Name=WP_032425553.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004196359.1;locus_tag=PHA56_RS28400;product=hypothetical protein;protein_id=WP_032425553.1;transl_table=11 NZ_CP116215.1 RefSeq pseudogene 58904 59096 . - . ID=gene-PHA56_RS28405;Name=PHA56_RS28405;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS28405;old_locus_tag=PHA56_28405;partial=true;pseudo=true;start_range=.,58904 NZ_CP116215.1 Protein Homology CDS 58904 59096 . - 0 ID=cds-PHA56_RS28405;Parent=gene-PHA56_RS28405;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_063154576.1;locus_tag=PHA56_RS28405;partial=true;product=MFS transporter;pseudo=true;start_range=.,58904;transl_table=11 NZ_CP116215.1 RefSeq gene 59126 60103 . + . ID=gene-PHA56_RS28410;Name=PHA56_RS28410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28410;old_locus_tag=PHA56_28410 NZ_CP116215.1 Protein Homology CDS 59126 60103 . + 0 ID=cds-WP_004196334.1;Parent=gene-PHA56_RS28410;Dbxref=Genbank:WP_004196334.1;Name=WP_004196334.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004118716.1;locus_tag=PHA56_RS28410;product=chromate resistance protein;protein_id=WP_004196334.1;transl_table=11 NZ_CP116215.1 RefSeq gene 60060 61436 . + . ID=gene-PHA56_RS28415;Name=chrA;gbkey=Gene;gene=chrA;gene_biotype=protein_coding;locus_tag=PHA56_RS28415;old_locus_tag=PHA56_28415 NZ_CP116215.1 Protein Homology CDS 60060 61436 . + 0 ID=cds-WP_004196363.1;Parent=gene-PHA56_RS28415;Dbxref=Genbank:WP_004196363.1;Name=WP_004196363.1;Ontology_term=GO:0015703,GO:0015109;gbkey=CDS;gene=chrA;go_function=chromate transmembrane transporter activity|0015109||IEA;go_process=chromate transport|0015703||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004118718.1;locus_tag=PHA56_RS28415;product=chromate efflux transporter;protein_id=WP_004196363.1;transl_table=11 NZ_CP116215.1 RefSeq gene 61467 62156 . - . ID=gene-PHA56_RS28420;Name=PHA56_RS28420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28420;old_locus_tag=PHA56_28420 NZ_CP116215.1 Protein Homology CDS 61467 62156 . - 0 ID=cds-WP_004196322.1;Parent=gene-PHA56_RS28420;Dbxref=Genbank:WP_004196322.1;Name=WP_004196322.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004196322.1;locus_tag=PHA56_RS28420;product=hypothetical protein;protein_id=WP_004196322.1;transl_table=11 NZ_CP116215.1 RefSeq gene 62170 62907 . - . ID=gene-PHA56_RS28425;Name=PHA56_RS28425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28425;old_locus_tag=PHA56_28425 NZ_CP116215.1 Protein Homology CDS 62170 62907 . - 0 ID=cds-WP_008460272.1;Parent=gene-PHA56_RS28425;Dbxref=Genbank:WP_008460272.1;Name=WP_008460272.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008460272.1;locus_tag=PHA56_RS28425;product=HupE/UreJ family protein;protein_id=WP_008460272.1;transl_table=11 NZ_CP116215.1 RefSeq gene 62951 63316 . - . ID=gene-PHA56_RS28430;Name=PHA56_RS28430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28430;old_locus_tag=PHA56_28430 NZ_CP116215.1 Protein Homology CDS 62951 63316 . - 0 ID=cds-WP_009651956.1;Parent=gene-PHA56_RS28430;Dbxref=Genbank:WP_009651956.1;Name=WP_009651956.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009651956.1;locus_tag=PHA56_RS28430;product=hypothetical protein;protein_id=WP_009651956.1;transl_table=11 NZ_CP116215.1 RefSeq pseudogene 63444 63542 . - . ID=gene-PHA56_RS28435;Name=ydfV;gbkey=Gene;gene=ydfV;gene_biotype=pseudogene;locus_tag=PHA56_RS28435;old_locus_tag=PHA56_28435;partial=true;pseudo=true;start_range=.,63444 NZ_CP116215.1 Protein Homology CDS 63444 63542 . - 0 ID=cds-PHA56_RS28435;Parent=gene-PHA56_RS28435;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=ydfV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416083.1;locus_tag=PHA56_RS28435;partial=true;product=protein YdfV;pseudo=true;start_range=.,63444;transl_table=11 NZ_CP116215.1 RefSeq gene 63567 63806 . + . ID=gene-PHA56_RS28440;Name=relB;gbkey=Gene;gene=relB;gene_biotype=protein_coding;locus_tag=PHA56_RS28440;old_locus_tag=PHA56_28440 NZ_CP116215.1 Protein Homology CDS 63567 63806 . + 0 ID=cds-WP_004196370.1;Parent=gene-PHA56_RS28440;Dbxref=Genbank:WP_004196370.1;Name=WP_004196370.1;gbkey=CDS;gene=relB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416082.1;locus_tag=PHA56_RS28440;product=type II toxin-antitoxin system antitoxin RelB;protein_id=WP_004196370.1;transl_table=11 NZ_CP116215.1 RefSeq gene 63806 64093 . + . ID=gene-PHA56_RS28445;Name=relE;gbkey=Gene;gene=relE;gene_biotype=protein_coding;locus_tag=PHA56_RS28445;old_locus_tag=PHA56_28445 NZ_CP116215.1 Protein Homology CDS 63806 64093 . + 0 ID=cds-WP_000323025.1;Parent=gene-PHA56_RS28445;Dbxref=Genbank:WP_000323025.1;Name=WP_000323025.1;gbkey=CDS;gene=relE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416081.1;locus_tag=PHA56_RS28445;product=type II toxin-antitoxin system mRNA interferase RelE;protein_id=WP_000323025.1;transl_table=11 NZ_CP116215.1 RefSeq gene 64165 64323 . + . ID=gene-PHA56_RS28450;Name=PHA56_RS28450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28450;old_locus_tag=PHA56_28450 NZ_CP116215.1 Protein Homology CDS 64165 64323 . + 0 ID=cds-WP_004181898.1;Parent=gene-PHA56_RS28450;Dbxref=Genbank:WP_004181898.1;Name=WP_004181898.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052660.1;locus_tag=PHA56_RS28450;product=type I toxin-antitoxin system Hok family toxin;protein_id=WP_004181898.1;transl_table=11 NZ_CP116215.1 RefSeq gene 64929 65903 . + . ID=gene-PHA56_RS28455;Name=PHA56_RS28455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28455;old_locus_tag=PHA56_28455 NZ_CP116215.1 Protein Homology CDS 64929 65903 . + 0 ID=cds-WP_004196336.1;Parent=gene-PHA56_RS28455;Dbxref=Genbank:WP_004196336.1;Name=WP_004196336.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014386572.1;locus_tag=PHA56_RS28455;product=hypothetical protein;protein_id=WP_004196336.1;transl_table=11 NZ_CP116215.1 RefSeq gene 65887 66009 . + . ID=gene-PHA56_RS28460;Name=PHA56_RS28460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28460;old_locus_tag=PHA56_28460 NZ_CP116215.1 GeneMarkS-2+ CDS 65887 66009 . + 0 ID=cds-WP_254911979.1;Parent=gene-PHA56_RS28460;Dbxref=Genbank:WP_254911979.1;Name=WP_254911979.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PHA56_RS28460;product=hypothetical protein;protein_id=WP_254911979.1;transl_table=11 NZ_CP116215.1 RefSeq gene 66101 66478 . - . ID=gene-PHA56_RS28465;Name=PHA56_RS28465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28465;old_locus_tag=PHA56_28465 NZ_CP116215.1 Protein Homology CDS 66101 66478 . - 0 ID=cds-WP_045289277.1;Parent=gene-PHA56_RS28465;Dbxref=Genbank:WP_045289277.1;Name=WP_045289277.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004144074.1;locus_tag=PHA56_RS28465;product=hypothetical protein;protein_id=WP_045289277.1;transl_table=11 NZ_CP116215.1 RefSeq gene 66805 67101 . + . ID=gene-PHA56_RS28470;Name=PHA56_RS28470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28470;old_locus_tag=PHA56_28470 NZ_CP116215.1 Protein Homology CDS 66805 67101 . + 0 ID=cds-WP_094313394.1;Parent=gene-PHA56_RS28470;Dbxref=Genbank:WP_094313394.1;Name=WP_094313394.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004196317.1;locus_tag=PHA56_RS28470;product=hydrogenase expression/formation protein HypD;protein_id=WP_094313394.1;transl_table=11 NZ_CP116215.1 RefSeq gene 67170 68237 . + . ID=gene-PHA56_RS28475;Name=PHA56_RS28475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28475;old_locus_tag=PHA56_28475 NZ_CP116215.1 Protein Homology CDS 67170 68237 . + 0 ID=cds-WP_049130554.1;Parent=gene-PHA56_RS28475;Dbxref=Genbank:WP_049130554.1;Name=WP_049130554.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016947082.1;locus_tag=PHA56_RS28475;product=hypothetical protein;protein_id=WP_049130554.1;transl_table=11 NZ_CP116215.1 RefSeq gene 68393 68740 . + . ID=gene-PHA56_RS28480;Name=PHA56_RS28480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28480;old_locus_tag=PHA56_28480 NZ_CP116215.1 Protein Homology CDS 68393 68740 . + 0 ID=cds-WP_042935949.1;Parent=gene-PHA56_RS28480;Dbxref=Genbank:WP_042935949.1;Name=WP_042935949.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004196344.1;locus_tag=PHA56_RS28480;product=hypothetical protein;protein_id=WP_042935949.1;transl_table=11 NZ_CP116215.1 RefSeq gene 68819 69052 . + . ID=gene-PHA56_RS28485;Name=PHA56_RS28485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28485;old_locus_tag=PHA56_28485 NZ_CP116215.1 Protein Homology CDS 68819 69052 . + 0 ID=cds-WP_042935952.1;Parent=gene-PHA56_RS28485;Dbxref=Genbank:WP_042935952.1;Name=WP_042935952.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004196327.1;locus_tag=PHA56_RS28485;product=hypothetical protein;protein_id=WP_042935952.1;transl_table=11 NZ_CP116215.1 RefSeq gene 69672 69950 . + . ID=gene-PHA56_RS28490;Name=PHA56_RS28490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28490;old_locus_tag=PHA56_28490 NZ_CP116215.1 Protein Homology CDS 69672 69950 . + 0 ID=cds-WP_227649886.1;Parent=gene-PHA56_RS28490;Dbxref=Genbank:WP_227649886.1;Name=WP_227649886.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004026336.1;locus_tag=PHA56_RS28490;product=hypothetical protein;protein_id=WP_227649886.1;transl_table=11 NZ_CP116215.1 RefSeq gene 70004 70765 . - . ID=gene-PHA56_RS28495;Name=PHA56_RS28495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28495;old_locus_tag=PHA56_28495 NZ_CP116215.1 Protein Homology CDS 70004 70765 . - 0 ID=cds-WP_227666405.1;Parent=gene-PHA56_RS28495;Dbxref=Genbank:WP_227666405.1;Name=WP_227666405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004181907.1;locus_tag=PHA56_RS28495;product=nuclease-related domain-containing protein;protein_id=WP_227666405.1;transl_table=11 NZ_CP116215.1 RefSeq gene 70780 71916 . - . ID=gene-PHA56_RS28500;Name=PHA56_RS28500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28500;old_locus_tag=PHA56_28500 NZ_CP116215.1 Protein Homology CDS 70780 71916 . - 0 ID=cds-WP_004883400.1;Parent=gene-PHA56_RS28500;Dbxref=Genbank:WP_004883400.1;Name=WP_004883400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004883400.1;locus_tag=PHA56_RS28500;product=S49 family peptidase;protein_id=WP_004883400.1;transl_table=11 NZ_CP116215.1 RefSeq gene 71925 72599 . - . ID=gene-PHA56_RS28505;Name=PHA56_RS28505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28505;old_locus_tag=PHA56_28505 NZ_CP116215.1 Protein Homology CDS 71925 72599 . - 0 ID=cds-WP_004026331.1;Parent=gene-PHA56_RS28505;Dbxref=Genbank:WP_004026331.1;Name=WP_004026331.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004196348.1;locus_tag=PHA56_RS28505;product=DUF4400 domain-containing protein;protein_id=WP_004026331.1;transl_table=11 NZ_CP116215.1 RefSeq gene 72612 73358 . - . ID=gene-PHA56_RS28510;Name=PHA56_RS28510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28510;old_locus_tag=PHA56_28510 NZ_CP116215.1 GeneMarkS-2+ CDS 72612 73358 . - 0 ID=cds-WP_271292999.1;Parent=gene-PHA56_RS28510;Dbxref=Genbank:WP_271292999.1;Name=WP_271292999.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PHA56_RS28510;product=hypothetical protein;protein_id=WP_271292999.1;transl_table=11 NZ_CP116215.1 RefSeq gene 73438 74558 . + . ID=gene-PHA56_RS28515;Name=PHA56_RS28515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28515;old_locus_tag=PHA56_28515 NZ_CP116215.1 Protein Homology CDS 73438 73696 . + 0 ID=cds-WP_085956072.1-6;Parent=gene-PHA56_RS28515;Dbxref=Genbank:WP_085956072.1;Name=WP_085956072.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611473.1;locus_tag=PHA56_RS28515;product=IS3-like element ISKpn34 family transposase;protein_id=WP_085956072.1;transl_table=11 NZ_CP116215.1 Protein Homology CDS 73696 74558 . + 2 ID=cds-WP_085956072.1-6;Parent=gene-PHA56_RS28515;Dbxref=Genbank:WP_085956072.1;Name=WP_085956072.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611473.1;locus_tag=PHA56_RS28515;product=IS3-like element ISKpn34 family transposase;protein_id=WP_085956072.1;transl_table=11 NZ_CP116215.1 RefSeq gene 74585 74959 . - . ID=gene-PHA56_RS28520;Name=PHA56_RS28520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28520;old_locus_tag=PHA56_28520 NZ_CP116215.1 GeneMarkS-2+ CDS 74585 74959 . - 0 ID=cds-WP_271293000.1;Parent=gene-PHA56_RS28520;Dbxref=Genbank:WP_271293000.1;Name=WP_271293000.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PHA56_RS28520;product=hypothetical protein;protein_id=WP_271293000.1;transl_table=11 NZ_CP116215.1 RefSeq gene 74968 75282 . - . ID=gene-PHA56_RS28525;Name=PHA56_RS28525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28525;old_locus_tag=PHA56_28525 NZ_CP116215.1 Protein Homology CDS 74968 75282 . - 0 ID=cds-WP_004196316.1;Parent=gene-PHA56_RS28525;Dbxref=Genbank:WP_004196316.1;Name=WP_004196316.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004883458.1;locus_tag=PHA56_RS28525;product=hypothetical protein;protein_id=WP_004196316.1;transl_table=11 NZ_CP116215.1 RefSeq gene 75417 76637 . + . ID=gene-PHA56_RS28530;Name=PHA56_RS28530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28530;old_locus_tag=PHA56_28530 NZ_CP116215.1 Protein Homology CDS 75417 76637 . + 0 ID=cds-WP_000343760.1;Parent=gene-PHA56_RS28530;Dbxref=Genbank:WP_000343760.1;Name=WP_000343760.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343760.1;locus_tag=PHA56_RS28530;product=ISL3-like element ISKox3 family transposase;protein_id=WP_000343760.1;transl_table=11 NZ_CP116215.1 RefSeq gene 77457 79553 . + . ID=gene-PHA56_RS28535;Name=PHA56_RS28535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28535;old_locus_tag=PHA56_28535 NZ_CP116215.1 Protein Homology CDS 77457 79553 . + 0 ID=cds-WP_070596063.1;Parent=gene-PHA56_RS28535;Dbxref=Genbank:WP_070596063.1;Name=WP_070596063.1;Ontology_term=GO:0005525;gbkey=CDS;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017399009.1;locus_tag=PHA56_RS28535;product=50S ribosome-binding GTPase;protein_id=WP_070596063.1;transl_table=11 NZ_CP116215.1 RefSeq gene 79563 81272 . + . ID=gene-PHA56_RS28540;Name=PHA56_RS28540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28540;old_locus_tag=PHA56_28540 NZ_CP116215.1 Protein Homology CDS 79563 81272 . + 0 ID=cds-WP_070596064.1;Parent=gene-PHA56_RS28540;Dbxref=Genbank:WP_070596064.1;Name=WP_070596064.1;Ontology_term=GO:0005525;gbkey=CDS;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017401105.1;locus_tag=PHA56_RS28540;product=50S ribosome-binding GTPase;protein_id=WP_070596064.1;transl_table=11 NZ_CP116215.1 RefSeq gene 81589 82569 . + . ID=gene-PHA56_RS28545;Name=PHA56_RS28545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28545;old_locus_tag=PHA56_28545 NZ_CP116215.1 Protein Homology CDS 81589 82569 . + 0 ID=cds-WP_271293001.1;Parent=gene-PHA56_RS28545;Dbxref=Genbank:WP_271293001.1;Name=WP_271293001.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000019445.1;locus_tag=PHA56_RS28545;product=IS5-like element ISKpn26 family transposase;protein_id=WP_271293001.1;transl_table=11 NZ_CP116215.1 RefSeq gene 82835 88603 . + . ID=gene-PHA56_RS28550;Name=PHA56_RS28550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28550;old_locus_tag=PHA56_28550 NZ_CP116215.1 Protein Homology CDS 82835 88603 . + 0 ID=cds-WP_070596068.1;Parent=gene-PHA56_RS28550;Dbxref=Genbank:WP_070596068.1;Name=WP_070596068.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017539.2;locus_tag=PHA56_RS28550;product=ATP-binding protein;protein_id=WP_070596068.1;transl_table=11 NZ_CP116215.1 RefSeq pseudogene 88831 89736 . + . ID=gene-PHA56_RS28555;Name=PHA56_RS28555;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS28555;old_locus_tag=PHA56_28555;pseudo=true NZ_CP116215.1 Protein Homology CDS 88831 89736 . + 0 ID=cds-PHA56_RS28555;Parent=gene-PHA56_RS28555;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612091.1;locus_tag=PHA56_RS28555;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_CP116215.1 RefSeq gene 90015 90437 . - . ID=gene-PHA56_RS28560;Name=PHA56_RS28560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28560;old_locus_tag=PHA56_28560 NZ_CP116215.1 GeneMarkS-2+ CDS 90015 90437 . - 0 ID=cds-WP_070596070.1;Parent=gene-PHA56_RS28560;Dbxref=Genbank:WP_070596070.1;Name=WP_070596070.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PHA56_RS28560;product=hypothetical protein;protein_id=WP_070596070.1;transl_table=11 NZ_CP116215.1 RefSeq gene 90430 91143 . - . ID=gene-PHA56_RS28565;Name=PHA56_RS28565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28565;old_locus_tag=PHA56_28565 NZ_CP116215.1 GeneMarkS-2+ CDS 90430 91143 . - 0 ID=cds-WP_070596071.1;Parent=gene-PHA56_RS28565;Dbxref=Genbank:WP_070596071.1;Name=WP_070596071.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PHA56_RS28565;product=hypothetical protein;protein_id=WP_070596071.1;transl_table=11 NZ_CP116215.1 RefSeq gene 92125 92481 . + . ID=gene-PHA56_RS28570;Name=PHA56_RS28570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28570;old_locus_tag=PHA56_28570 NZ_CP116215.1 GeneMarkS-2+ CDS 92125 92481 . + 0 ID=cds-WP_135726811.1;Parent=gene-PHA56_RS28570;Dbxref=Genbank:WP_135726811.1;Name=WP_135726811.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PHA56_RS28570;product=hypothetical protein;protein_id=WP_135726811.1;transl_table=11 NZ_CP116215.1 RefSeq gene 92553 93250 . - . ID=gene-PHA56_RS28575;Name=PHA56_RS28575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28575;old_locus_tag=PHA56_28575 NZ_CP116215.1 Protein Homology CDS 93001 93250 . - 0 ID=cds-WP_223335778.1-4;Parent=gene-PHA56_RS28575;Dbxref=Genbank:WP_223335778.1;Name=WP_223335778.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558260.1;locus_tag=PHA56_RS28575;product=IS1 family transposase;protein_id=WP_223335778.1;transl_table=11 NZ_CP116215.1 Protein Homology CDS 92553 93001 . - 2 ID=cds-WP_223335778.1-4;Parent=gene-PHA56_RS28575;Dbxref=Genbank:WP_223335778.1;Name=WP_223335778.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558260.1;locus_tag=PHA56_RS28575;product=IS1 family transposase;protein_id=WP_223335778.1;transl_table=11 NZ_CP116215.1 RefSeq gene 93489 93785 . + . ID=gene-PHA56_RS28580;Name=PHA56_RS28580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28580;old_locus_tag=PHA56_28580 NZ_CP116215.1 GeneMarkS-2+ CDS 93489 93785 . + 0 ID=cds-WP_227662202.1;Parent=gene-PHA56_RS28580;Dbxref=Genbank:WP_227662202.1;Name=WP_227662202.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PHA56_RS28580;product=hypothetical protein;protein_id=WP_227662202.1;transl_table=11 NZ_CP116215.1 RefSeq gene 94150 99102 . + . ID=gene-PHA56_RS28585;Name=PHA56_RS28585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28585;old_locus_tag=PHA56_28585 NZ_CP116215.1 Protein Homology CDS 94150 99102 . + 0 ID=cds-WP_070596072.1;Parent=gene-PHA56_RS28585;Dbxref=Genbank:WP_070596072.1;Name=WP_070596072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001441238.1;locus_tag=PHA56_RS28585;product=AAA domain-containing protein;protein_id=WP_070596072.1;transl_table=11 NZ_CP116215.1 RefSeq gene 99099 100526 . + . ID=gene-PHA56_RS28590;Name=PHA56_RS28590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28590;old_locus_tag=PHA56_28590 NZ_CP116215.1 Protein Homology CDS 99099 100526 . + 0 ID=cds-WP_070596073.1;Parent=gene-PHA56_RS28590;Dbxref=Genbank:WP_070596073.1;Name=WP_070596073.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000986687.1;locus_tag=PHA56_RS28590;product=hypothetical protein;protein_id=WP_070596073.1;transl_table=11 NZ_CP116215.1 RefSeq pseudogene 100770 101261 . + . ID=gene-PHA56_RS28595;Name=PHA56_RS28595;end_range=101261,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS28595;old_locus_tag=PHA56_28595;partial=true;pseudo=true;start_range=.,100770 NZ_CP116215.1 Protein Homology CDS 100770 101261 . + 0 ID=cds-PHA56_RS28595;Parent=gene-PHA56_RS28595;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0016020;end_range=101261,.;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312401.1;locus_tag=PHA56_RS28595;partial=true;product=ArsB/NhaD family transporter;pseudo=true;start_range=.,100770;transl_table=11 NZ_CP116215.1 RefSeq pseudogene 101260 101615 . - . ID=gene-PHA56_RS28600;Name=PHA56_RS28600;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS28600;old_locus_tag=PHA56_28600;partial=true;pseudo=true;start_range=.,101260 NZ_CP116215.1 Protein Homology CDS 101260 101615 . - 0 ID=cds-PHA56_RS28600;Parent=gene-PHA56_RS28600;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013365374.1;locus_tag=PHA56_RS28600;partial=true;product=transposase;pseudo=true;start_range=.,101260;transl_table=11 NZ_CP116215.1 RefSeq gene 102146 102703 . - . ID=gene-PHA56_RS28605;Name=PHA56_RS28605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28605;old_locus_tag=PHA56_28605 NZ_CP116215.1 Protein Homology CDS 102146 102703 . - 0 ID=cds-WP_070596074.1;Parent=gene-PHA56_RS28605;Dbxref=Genbank:WP_070596074.1;Name=WP_070596074.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001088752.1;locus_tag=PHA56_RS28605;product=hypothetical protein;protein_id=WP_070596074.1;transl_table=11 NZ_CP116215.1 RefSeq gene 102801 103133 . + . ID=gene-PHA56_RS28610;Name=PHA56_RS28610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28610;old_locus_tag=PHA56_28610 NZ_CP116215.1 Protein Homology CDS 102801 103133 . + 0 ID=cds-WP_083294055.1;Parent=gene-PHA56_RS28610;Dbxref=Genbank:WP_083294055.1;Name=WP_083294055.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001300511.1;locus_tag=PHA56_RS28610;product=helix-turn-helix transcriptional regulator;protein_id=WP_083294055.1;transl_table=11 NZ_CP116215.1 RefSeq pseudogene 103361 103465 . + . ID=gene-PHA56_RS28615;Name=PHA56_RS28615;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS28615;old_locus_tag=PHA56_28615;partial=true;pseudo=true;start_range=.,103361 NZ_CP116215.1 Protein Homology CDS 103361 103465 . + 0 ID=cds-PHA56_RS28615;Parent=gene-PHA56_RS28615;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312402.1;locus_tag=PHA56_RS28615;partial=true;product=arsenate reductase;pseudo=true;start_range=.,103361;transl_table=11 NZ_CP116215.1 RefSeq pseudogene 103755 103865 . + . ID=gene-PHA56_RS28620;Name=PHA56_RS28620;end_range=103865,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS28620;old_locus_tag=PHA56_28620;partial=true;pseudo=true NZ_CP116215.1 Protein Homology CDS 103755 103865 . + 0 ID=cds-PHA56_RS28620;Parent=gene-PHA56_RS28620;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=103865,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611504.1;locus_tag=PHA56_RS28620;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP116215.1 RefSeq pseudogene 103889 104107 . - . ID=gene-PHA56_RS28625;Name=PHA56_RS28625;end_range=104107,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS28625;old_locus_tag=PHA56_28625;partial=true;pseudo=true;start_range=.,103889 NZ_CP116215.1 Protein Homology CDS 103889 104107 . - 0 ID=cds-PHA56_RS28625;Parent=gene-PHA56_RS28625;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=104107,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004152817.1;locus_tag=PHA56_RS28625;partial=true;product=IS481 family transposase;pseudo=true;start_range=.,103889;transl_table=11 NZ_CP116215.1 RefSeq gene 104335 104667 . + . ID=gene-PHA56_RS28630;Name=PHA56_RS28630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28630;old_locus_tag=PHA56_28630 NZ_CP116215.1 Protein Homology CDS 104335 104667 . + 0 ID=cds-WP_071596078.1;Parent=gene-PHA56_RS28630;Dbxref=Genbank:WP_071596078.1;Name=WP_071596078.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001300511.1;locus_tag=PHA56_RS28630;product=helix-turn-helix transcriptional regulator;protein_id=WP_071596078.1;transl_table=11 NZ_CP116215.1 RefSeq gene 104651 104845 . + . ID=gene-PHA56_RS28635;Name=PHA56_RS28635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28635;old_locus_tag=PHA56_28635 NZ_CP116215.1 Protein Homology CDS 104651 104845 . + 0 ID=cds-WP_020078874.1;Parent=gene-PHA56_RS28635;Dbxref=Genbank:WP_020078874.1;Name=WP_020078874.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020802065.1;locus_tag=PHA56_RS28635;product=MbcA/ParS/Xre antitoxin family protein;protein_id=WP_020078874.1;transl_table=11 NZ_CP116215.1 RefSeq gene 105252 105680 . - . ID=gene-PHA56_RS28640;Name=PHA56_RS28640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28640;old_locus_tag=PHA56_28640 NZ_CP116215.1 Protein Homology CDS 105252 105680 . - 0 ID=cds-WP_020078875.1;Parent=gene-PHA56_RS28640;Dbxref=Genbank:WP_020078875.1;Name=WP_020078875.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020078875.1;locus_tag=PHA56_RS28640;product=hypothetical protein;protein_id=WP_020078875.1;transl_table=11 NZ_CP116215.1 RefSeq pseudogene 105680 106051 . - . ID=gene-PHA56_RS28645;Name=PHA56_RS28645;end_range=106051,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS28645;old_locus_tag=PHA56_28645;partial=true;pseudo=true NZ_CP116215.1 Protein Homology CDS 105680 106051 . - 0 ID=cds-PHA56_RS28645;Parent=gene-PHA56_RS28645;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=106051,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000716055.1;locus_tag=PHA56_RS28645;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP116215.1 RefSeq gene 106081 107201 . - . ID=gene-PHA56_RS28650;Name=PHA56_RS28650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28650;old_locus_tag=PHA56_28650 NZ_CP116215.1 Protein Homology CDS 106943 107201 . - 0 ID=cds-WP_085956072.1-7;Parent=gene-PHA56_RS28650;Dbxref=Genbank:WP_085956072.1;Name=WP_085956072.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611473.1;locus_tag=PHA56_RS28650;product=IS3-like element ISKpn34 family transposase;protein_id=WP_085956072.1;transl_table=11 NZ_CP116215.1 Protein Homology CDS 106081 106943 . - 2 ID=cds-WP_085956072.1-7;Parent=gene-PHA56_RS28650;Dbxref=Genbank:WP_085956072.1;Name=WP_085956072.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611473.1;locus_tag=PHA56_RS28650;product=IS3-like element ISKpn34 family transposase;protein_id=WP_085956072.1;transl_table=11 NZ_CP116215.1 RefSeq gene 107235 109271 . - . ID=gene-PHA56_RS28655;Name=PHA56_RS28655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28655;old_locus_tag=PHA56_28655 NZ_CP116215.1 Protein Homology CDS 107235 109271 . - 0 ID=cds-WP_271293002.1;Parent=gene-PHA56_RS28655;Dbxref=Genbank:WP_271293002.1;Name=WP_271293002.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000716055.1;locus_tag=PHA56_RS28655;product=hypothetical protein;protein_id=WP_271293002.1;transl_table=11 NZ_CP116215.1 RefSeq gene 109268 110818 . - . ID=gene-PHA56_RS28660;Name=PHA56_RS28660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28660;old_locus_tag=PHA56_28660 NZ_CP116215.1 Protein Homology CDS 109268 110818 . - 0 ID=cds-WP_070596077.1;Parent=gene-PHA56_RS28660;Dbxref=Genbank:WP_070596077.1;Name=WP_070596077.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020078877.1;locus_tag=PHA56_RS28660;product=site-specific integrase;protein_id=WP_070596077.1;transl_table=11 NZ_CP116215.1 RefSeq gene 110802 111623 . - . ID=gene-PHA56_RS28665;Name=PHA56_RS28665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28665;old_locus_tag=PHA56_28665 NZ_CP116215.1 Protein Homology CDS 110802 111623 . - 0 ID=cds-WP_271293003.1;Parent=gene-PHA56_RS28665;Dbxref=Genbank:WP_271293003.1;Name=WP_271293003.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020078878.1;locus_tag=PHA56_RS28665;product=site-specific integrase;protein_id=WP_271293003.1;transl_table=11 NZ_CP116215.1 RefSeq gene 111912 112049 . + . ID=gene-PHA56_RS28670;Name=PHA56_RS28670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28670;old_locus_tag=PHA56_28670 NZ_CP116215.1 Protein Homology CDS 111912 112049 . + 0 ID=cds-WP_271293004.1;Parent=gene-PHA56_RS28670;Dbxref=Genbank:WP_271293004.1;Name=WP_271293004.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001394287.1;locus_tag=PHA56_RS28670;product=hypothetical protein;protein_id=WP_271293004.1;transl_table=11 NZ_CP116215.1 RefSeq gene 112125 113332 . + . ID=gene-PHA56_RS28675;Name=PHA56_RS28675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28675;old_locus_tag=PHA56_28675 NZ_CP116215.1 Protein Homology CDS 112125 112446 . + 0 ID=cds-WP_085955172.1;Parent=gene-PHA56_RS28675;Dbxref=Genbank:WP_085955172.1;Name=WP_085955172.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611134.1;locus_tag=PHA56_RS28675;product=IS3 family transposase;protein_id=WP_085955172.1;transl_table=11 NZ_CP116215.1 Protein Homology CDS 112446 113332 . + 2 ID=cds-WP_085955172.1;Parent=gene-PHA56_RS28675;Dbxref=Genbank:WP_085955172.1;Name=WP_085955172.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611134.1;locus_tag=PHA56_RS28675;product=IS3 family transposase;protein_id=WP_085955172.1;transl_table=11 NZ_CP116215.1 RefSeq gene 114197 114595 . - . ID=gene-PHA56_RS28680;Name=PHA56_RS28680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28680;old_locus_tag=PHA56_28680 NZ_CP116215.1 Protein Homology CDS 114197 114595 . - 0 ID=cds-WP_004181717.1;Parent=gene-PHA56_RS28680;Dbxref=Genbank:WP_004181717.1;Name=WP_004181717.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910103.1;locus_tag=PHA56_RS28680;product=H-NS family nucleoid-associated regulatory protein;protein_id=WP_004181717.1;transl_table=11 NZ_CP116215.1 RefSeq gene 114999 115673 . - . ID=gene-PHA56_RS28685;Name=PHA56_RS28685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28685;old_locus_tag=PHA56_28685 NZ_CP116215.1 Protein Homology CDS 114999 115673 . - 0 ID=cds-WP_271293005.1;Parent=gene-PHA56_RS28685;Dbxref=Genbank:WP_271293005.1;Name=WP_271293005.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004197613.1;locus_tag=PHA56_RS28685;product=DNA repair protein;protein_id=WP_271293005.1;transl_table=11 NZ_CP116215.1 RefSeq gene 115695 116815 . + . ID=gene-PHA56_RS28690;Name=PHA56_RS28690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28690;old_locus_tag=PHA56_28690 NZ_CP116215.1 Protein Homology CDS 115695 115953 . + 0 ID=cds-WP_085956072.1-8;Parent=gene-PHA56_RS28690;Dbxref=Genbank:WP_085956072.1;Name=WP_085956072.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611473.1;locus_tag=PHA56_RS28690;product=IS3-like element ISKpn34 family transposase;protein_id=WP_085956072.1;transl_table=11 NZ_CP116215.1 Protein Homology CDS 115953 116815 . + 2 ID=cds-WP_085956072.1-8;Parent=gene-PHA56_RS28690;Dbxref=Genbank:WP_085956072.1;Name=WP_085956072.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611473.1;locus_tag=PHA56_RS28690;product=IS3-like element ISKpn34 family transposase;protein_id=WP_085956072.1;transl_table=11 NZ_CP116215.1 RefSeq pseudogene 116848 117042 . - . ID=gene-PHA56_RS28695;Name=PHA56_RS28695;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS28695;old_locus_tag=PHA56_28695;partial=true;pseudo=true;start_range=.,116848 NZ_CP116215.1 Protein Homology CDS 116848 117042 . - 0 ID=cds-PHA56_RS28695;Parent=gene-PHA56_RS28695;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017051632.1;locus_tag=PHA56_RS28695;partial=true;product=DNA repair protein;pseudo=true;start_range=.,116848;transl_table=11 NZ_CP116215.1 RefSeq gene 117153 117647 . - . ID=gene-PHA56_RS28700;Name=PHA56_RS28700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28700;old_locus_tag=PHA56_28700 NZ_CP116215.1 Protein Homology CDS 117153 117647 . - 0 ID=cds-WP_032455404.1;Parent=gene-PHA56_RS28700;Dbxref=Genbank:WP_032455404.1;Name=WP_032455404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009655004.1;locus_tag=PHA56_RS28700;product=thermonuclease family protein;protein_id=WP_032455404.1;transl_table=11 NZ_CP116215.1 RefSeq gene 117830 119101 . + . ID=gene-PHA56_RS28705;Name=PHA56_RS28705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28705;old_locus_tag=PHA56_28705 NZ_CP116215.1 Protein Homology CDS 117830 119101 . + 0 ID=cds-WP_271293006.1;Parent=gene-PHA56_RS28705;Dbxref=Genbank:WP_271293006.1;Name=WP_271293006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004026624.1;locus_tag=PHA56_RS28705;product=DUF1173 family protein;protein_id=WP_271293006.1;transl_table=11 NZ_CP116215.1 RefSeq gene 120094 120696 . + . ID=gene-PHA56_RS28710;Name=PHA56_RS28710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28710;old_locus_tag=PHA56_28710 NZ_CP116215.1 Protein Homology CDS 120094 120696 . + 0 ID=cds-WP_004197614.1;Parent=gene-PHA56_RS28710;Dbxref=Genbank:WP_004197614.1;Name=WP_004197614.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004026623.1;locus_tag=PHA56_RS28710;product=hypothetical protein;protein_id=WP_004197614.1;transl_table=11 NZ_CP116215.1 RefSeq gene 120967 121686 . + . ID=gene-PHA56_RS28715;Name=PHA56_RS28715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28715;old_locus_tag=PHA56_28715 NZ_CP116215.1 Protein Homology CDS 120967 121686 . + 0 ID=cds-WP_225722749.1;Parent=gene-PHA56_RS28715;Dbxref=Genbank:WP_225722749.1;Name=WP_225722749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004883473.1;locus_tag=PHA56_RS28715;product=plasmid SOS inhibition protein A;protein_id=WP_225722749.1;transl_table=11 NZ_CP116215.1 RefSeq gene 121917 122675 . + . ID=gene-PHA56_RS28720;Name=PHA56_RS28720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28720;old_locus_tag=PHA56_28720 NZ_CP116215.1 Protein Homology CDS 121917 122675 . + 0 ID=cds-WP_040209506.1;Parent=gene-PHA56_RS28720;Dbxref=Genbank:WP_040209506.1;Name=WP_040209506.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004883475.1;locus_tag=PHA56_RS28720;product=hypothetical protein;protein_id=WP_040209506.1;transl_table=11 NZ_CP116215.1 RefSeq gene 122743 123135 . + . ID=gene-PHA56_RS28725;Name=PHA56_RS28725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28725;old_locus_tag=PHA56_28725 NZ_CP116215.1 Protein Homology CDS 122743 123135 . + 0 ID=cds-WP_004196899.1;Parent=gene-PHA56_RS28725;Dbxref=Genbank:WP_004196899.1;Name=WP_004196899.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012540175.1;locus_tag=PHA56_RS28725;product=hypothetical protein;protein_id=WP_004196899.1;transl_table=11 NZ_CP116215.1 RefSeq gene 123716 124363 . + . ID=gene-PHA56_RS28730;Name=PHA56_RS28730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28730;old_locus_tag=PHA56_28730 NZ_CP116215.1 Protein Homology CDS 123716 124363 . + 0 ID=cds-WP_001100942.1;Parent=gene-PHA56_RS28730;Dbxref=Genbank:WP_001100942.1;Name=WP_001100942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004210231.1;locus_tag=PHA56_RS28730;product=HAD-IB family hydrolase;protein_id=WP_001100942.1;transl_table=11 NZ_CP116215.1 RefSeq gene 124699 125940 . - . ID=gene-PHA56_RS28735;Name=PHA56_RS28735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28735;old_locus_tag=PHA56_28735 NZ_CP116215.1 Protein Homology CDS 124699 125940 . - 0 ID=cds-WP_042922219.1;Parent=gene-PHA56_RS28735;Dbxref=Genbank:WP_042922219.1;Name=WP_042922219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001176934.1;locus_tag=PHA56_RS28735;product=VWA domain-containing protein;protein_id=WP_042922219.1;transl_table=11 NZ_CP116215.1 RefSeq gene 126025 126600 . - . ID=gene-PHA56_RS28740;Name=terE;gbkey=Gene;gene=terE;gene_biotype=protein_coding;locus_tag=PHA56_RS28740;old_locus_tag=PHA56_28740 NZ_CP116215.1 Protein Homology CDS 126025 126600 . - 0 ID=cds-WP_004196906.1;Parent=gene-PHA56_RS28740;Dbxref=Genbank:WP_004196906.1;Name=WP_004196906.1;gbkey=CDS;gene=terE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309383.1;locus_tag=PHA56_RS28740;product=tellurium resistance cAMP binding protein TerE;protein_id=WP_004196906.1;transl_table=11 NZ_CP116215.1 RefSeq gene 126687 127265 . - . ID=gene-PHA56_RS28745;Name=terD;gbkey=Gene;gene=terD;gene_biotype=protein_coding;locus_tag=PHA56_RS28745;old_locus_tag=PHA56_28745 NZ_CP116215.1 Protein Homology CDS 126687 127265 . - 0 ID=cds-WP_040209498.1;Parent=gene-PHA56_RS28745;Dbxref=Genbank:WP_040209498.1;Name=WP_040209498.1;gbkey=CDS;gene=terD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309382.1;locus_tag=PHA56_RS28745;product=tellurium resistance membrane protein TerD;protein_id=WP_040209498.1;transl_table=11 NZ_CP116215.1 RefSeq gene 127304 128344 . - . ID=gene-PHA56_RS28750;Name=terC;gbkey=Gene;gene=terC;gene_biotype=protein_coding;locus_tag=PHA56_RS28750;old_locus_tag=PHA56_28750 NZ_CP116215.1 Protein Homology CDS 127304 128344 . - 0 ID=cds-WP_004026607.1;Parent=gene-PHA56_RS28750;Dbxref=Genbank:WP_004026607.1;Name=WP_004026607.1;gbkey=CDS;gene=terC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309381.1;locus_tag=PHA56_RS28750;product=tellurium resistance membrane protein TerC;protein_id=WP_004026607.1;transl_table=11 NZ_CP116215.1 RefSeq gene 128368 128823 . - . ID=gene-PHA56_RS28755;Name=terB;gbkey=Gene;gene=terB;gene_biotype=protein_coding;locus_tag=PHA56_RS28755;old_locus_tag=PHA56_28755 NZ_CP116215.1 Protein Homology CDS 128368 128823 . - 0 ID=cds-WP_004026604.1;Parent=gene-PHA56_RS28755;Dbxref=Genbank:WP_004026604.1;Name=WP_004026604.1;gbkey=CDS;gene=terB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309380.1;locus_tag=PHA56_RS28755;product=tellurium resistance membrane protein TerB;protein_id=WP_004026604.1;transl_table=11 NZ_CP116215.1 RefSeq gene 128846 129997 . - . ID=gene-PHA56_RS28760;Name=terA;gbkey=Gene;gene=terA;gene_biotype=protein_coding;locus_tag=PHA56_RS28760;old_locus_tag=PHA56_28760 NZ_CP116215.1 Protein Homology CDS 128846 129997 . - 0 ID=cds-WP_032720942.1;Parent=gene-PHA56_RS28760;Dbxref=Genbank:WP_032720942.1;Name=WP_032720942.1;gbkey=CDS;gene=terA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309379.2;locus_tag=PHA56_RS28760;product=tellurium resistance system protein TerA;protein_id=WP_032720942.1;transl_table=11 NZ_CP116215.1 RefSeq gene 129994 130578 . - . ID=gene-PHA56_RS28765;Name=PHA56_RS28765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28765;old_locus_tag=PHA56_28765 NZ_CP116215.1 Protein Homology CDS 129994 130578 . - 0 ID=cds-WP_040209492.1;Parent=gene-PHA56_RS28765;Dbxref=Genbank:WP_040209492.1;Name=WP_040209492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012540223.1;locus_tag=PHA56_RS28765;product=TerD family protein;protein_id=WP_040209492.1;transl_table=11 NZ_CP116215.1 RefSeq gene 130890 131948 . + . ID=gene-PHA56_RS28770;Name=PHA56_RS28770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28770;old_locus_tag=PHA56_28770 NZ_CP116215.1 Protein Homology CDS 130890 131948 . + 0 ID=cds-WP_004026600.1;Parent=gene-PHA56_RS28770;Dbxref=Genbank:WP_004026600.1;Name=WP_004026600.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004026600.1;locus_tag=PHA56_RS28770;product=ATP-grasp domain-containing protein;protein_id=WP_004026600.1;transl_table=11 NZ_CP116215.1 RefSeq gene 131960 133102 . + . ID=gene-PHA56_RS28775;Name=PHA56_RS28775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28775;old_locus_tag=PHA56_28775 NZ_CP116215.1 Protein Homology CDS 131960 133102 . + 0 ID=cds-WP_040209517.1;Parent=gene-PHA56_RS28775;Dbxref=Genbank:WP_040209517.1;Name=WP_040209517.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001280121.1;locus_tag=PHA56_RS28775;product=phosphoribosyltransferase domain-containing protein;protein_id=WP_040209517.1;transl_table=11 NZ_CP116215.1 RefSeq gene 133095 133868 . + . ID=gene-PHA56_RS28780;Name=PHA56_RS28780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28780;old_locus_tag=PHA56_28780 NZ_CP116215.1 Protein Homology CDS 133095 133868 . + 0 ID=cds-WP_004181732.1;Parent=gene-PHA56_RS28780;Dbxref=Genbank:WP_004181732.1;Name=WP_004181732.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014839883.1;locus_tag=PHA56_RS28780;product=hypothetical protein;protein_id=WP_004181732.1;transl_table=11 NZ_CP116215.1 RefSeq gene 133870 134949 . + . ID=gene-PHA56_RS28785;Name=PHA56_RS28785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28785;old_locus_tag=PHA56_28785 NZ_CP116215.1 Protein Homology CDS 133870 134949 . + 0 ID=cds-WP_040209488.1;Parent=gene-PHA56_RS28785;Dbxref=Genbank:WP_040209488.1;Name=WP_040209488.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004181734.1;locus_tag=PHA56_RS28785;product=cysteine protease StiP family protein;protein_id=WP_040209488.1;transl_table=11 NZ_CP116215.1 RefSeq gene 134949 135905 . + . ID=gene-PHA56_RS28790;Name=PHA56_RS28790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28790;old_locus_tag=PHA56_28790 NZ_CP116215.1 Protein Homology CDS 134949 135905 . + 0 ID=cds-WP_042922223.1;Parent=gene-PHA56_RS28790;Dbxref=Genbank:WP_042922223.1;Name=WP_042922223.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004026594.1;locus_tag=PHA56_RS28790;product=HpcH/HpaI aldolase/citrate lyase family protein;protein_id=WP_042922223.1;transl_table=11 NZ_CP116215.1 RefSeq gene 135916 137139 . + . ID=gene-PHA56_RS28795;Name=PHA56_RS28795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28795;old_locus_tag=PHA56_28795 NZ_CP116215.1 Protein Homology CDS 135916 137139 . + 0 ID=cds-WP_040209483.1;Parent=gene-PHA56_RS28795;Dbxref=Genbank:WP_040209483.1;Name=WP_040209483.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004210256.1;locus_tag=PHA56_RS28795;product=DUF4236 domain-containing protein;protein_id=WP_040209483.1;transl_table=11 NZ_CP116215.1 RefSeq gene 137142 137600 . + . ID=gene-PHA56_RS28800;Name=PHA56_RS28800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28800;old_locus_tag=PHA56_28800 NZ_CP116215.1 Protein Homology CDS 137142 137600 . + 0 ID=cds-WP_040209474.1;Parent=gene-PHA56_RS28800;Dbxref=Genbank:WP_040209474.1;Name=WP_040209474.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004196888.1;locus_tag=PHA56_RS28800;product=ribbon-helix-helix protein%2C CopG family;protein_id=WP_040209474.1;transl_table=11 NZ_CP116215.1 RefSeq gene 138080 138718 . + . ID=gene-PHA56_RS28805;Name=PHA56_RS28805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28805;old_locus_tag=PHA56_28805 NZ_CP116215.1 Protein Homology CDS 138080 138718 . + 0 ID=cds-WP_004210261.1;Parent=gene-PHA56_RS28805;Dbxref=Genbank:WP_004210261.1;Name=WP_004210261.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015731191.1;locus_tag=PHA56_RS28805;product=VWA domain-containing protein;protein_id=WP_004210261.1;transl_table=11 NZ_CP116215.1 RefSeq gene 138743 139384 . + . ID=gene-PHA56_RS28810;Name=PHA56_RS28810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28810;old_locus_tag=PHA56_28810 NZ_CP116215.1 Protein Homology CDS 138743 139384 . + 0 ID=cds-WP_004026586.1;Parent=gene-PHA56_RS28810;Dbxref=Genbank:WP_004026586.1;Name=WP_004026586.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210396.1;locus_tag=PHA56_RS28810;product=TerD family protein;protein_id=WP_004026586.1;transl_table=11 NZ_CP116215.1 RefSeq gene 139385 140023 . + . ID=gene-PHA56_RS28815;Name=PHA56_RS28815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28815;old_locus_tag=PHA56_28815 NZ_CP116215.1 Protein Homology CDS 139385 140023 . + 0 ID=cds-WP_004026585.1;Parent=gene-PHA56_RS28815;Dbxref=Genbank:WP_004026585.1;Name=WP_004026585.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013087240.1;locus_tag=PHA56_RS28815;product=VWA domain-containing protein;protein_id=WP_004026585.1;transl_table=11 NZ_CP116215.1 RefSeq gene 140116 141156 . + . ID=gene-PHA56_RS28820;Name=PHA56_RS28820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28820;old_locus_tag=PHA56_28820 NZ_CP116215.1 Protein Homology CDS 140116 141156 . + 0 ID=cds-WP_004026583.1;Parent=gene-PHA56_RS28820;Dbxref=Genbank:WP_004026583.1;Name=WP_004026583.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004026583.1;locus_tag=PHA56_RS28820;product=TerY-C metal binding domain-containing protein;protein_id=WP_004026583.1;transl_table=11 NZ_CP116215.1 RefSeq gene 141156 142889 . + . ID=gene-PHA56_RS28825;Name=PHA56_RS28825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28825;old_locus_tag=PHA56_28825 NZ_CP116215.1 Protein Homology CDS 141156 142889 . + 0 ID=cds-WP_040209467.1;Parent=gene-PHA56_RS28825;Dbxref=Genbank:WP_040209467.1;Name=WP_040209467.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011251311.1;locus_tag=PHA56_RS28825;product=PP2C family serine/threonine-protein phosphatase;protein_id=WP_040209467.1;transl_table=11 NZ_CP116215.1 RefSeq gene 142917 144416 . + . ID=gene-PHA56_RS28830;Name=PHA56_RS28830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28830;old_locus_tag=PHA56_28830 NZ_CP116215.1 Protein Homology CDS 142917 144416 . + 0 ID=cds-WP_004196935.1;Parent=gene-PHA56_RS28830;Dbxref=Genbank:WP_004196935.1;Name=WP_004196935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303502.1;locus_tag=PHA56_RS28830;product=lipopolysaccharide kinase InaA family protein;protein_id=WP_004196935.1;transl_table=11 NZ_CP116215.1 RefSeq gene 144795 145277 . + . ID=gene-PHA56_RS28835;Name=PHA56_RS28835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28835;old_locus_tag=PHA56_28835 NZ_CP116215.1 Protein Homology CDS 144795 145277 . + 0 ID=cds-WP_042922379.1;Parent=gene-PHA56_RS28835;Dbxref=Genbank:WP_042922379.1;Name=WP_042922379.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013096748.1;locus_tag=PHA56_RS28835;product=hypothetical protein;protein_id=WP_042922379.1;transl_table=11 NZ_CP116215.1 RefSeq gene 145553 145957 . - . ID=gene-PHA56_RS28840;Name=PHA56_RS28840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28840;old_locus_tag=PHA56_28840 NZ_CP116215.1 Protein Homology CDS 145553 145957 . - 0 ID=cds-WP_004118061.1;Parent=gene-PHA56_RS28840;Dbxref=Genbank:WP_004118061.1;Name=WP_004118061.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016529521.1;locus_tag=PHA56_RS28840;product=DUF2251 domain-containing protein;protein_id=WP_004118061.1;transl_table=11 NZ_CP116215.1 RefSeq gene 146505 146783 . - . ID=gene-PHA56_RS28845;Name=PHA56_RS28845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28845;old_locus_tag=PHA56_28845 NZ_CP116215.1 Protein Homology CDS 146505 146783 . - 0 ID=cds-WP_004118062.1;Parent=gene-PHA56_RS28845;Dbxref=Genbank:WP_004118062.1;Name=WP_004118062.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000801915.1;locus_tag=PHA56_RS28845;product=DUF1778 domain-containing protein;protein_id=WP_004118062.1;transl_table=11 NZ_CP116215.1 RefSeq gene 146877 147089 . - . ID=gene-PHA56_RS28850;Name=PHA56_RS28850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28850;old_locus_tag=PHA56_28850 NZ_CP116215.1 Protein Homology CDS 146877 147089 . - 0 ID=cds-WP_004118064.1;Parent=gene-PHA56_RS28850;Dbxref=Genbank:WP_004118064.1;Name=WP_004118064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004210286.1;locus_tag=PHA56_RS28850;product=hypothetical protein;protein_id=WP_004118064.1;transl_table=11 NZ_CP116215.1 RefSeq gene 147755 147940 . + . ID=gene-PHA56_RS28855;Name=PHA56_RS28855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28855;old_locus_tag=PHA56_28855 NZ_CP116215.1 GeneMarkS-2+ CDS 147755 147940 . + 0 ID=cds-WP_040238763.1;Parent=gene-PHA56_RS28855;Dbxref=Genbank:WP_040238763.1;Name=WP_040238763.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PHA56_RS28855;product=hypothetical protein;protein_id=WP_040238763.1;transl_table=11 NZ_CP116215.1 RefSeq gene 147994 148452 . - . ID=gene-PHA56_RS28860;Name=PHA56_RS28860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28860;old_locus_tag=PHA56_28860 NZ_CP116215.1 Protein Homology CDS 147994 148452 . - 0 ID=cds-WP_014386535.1;Parent=gene-PHA56_RS28860;Dbxref=Genbank:WP_014386535.1;Name=WP_014386535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004118072.1;locus_tag=PHA56_RS28860;product=hypothetical protein;protein_id=WP_014386535.1;transl_table=11 NZ_CP116215.1 RefSeq gene 148902 149924 . - . ID=gene-PHA56_RS28865;Name=PHA56_RS28865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28865;old_locus_tag=PHA56_28865 NZ_CP116215.1 Protein Homology CDS 148902 149924 . - 0 ID=cds-WP_000156887.1-2;Parent=gene-PHA56_RS28865;Dbxref=Genbank:WP_000156887.1;Name=WP_000156887.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612074.1;locus_tag=PHA56_RS28865;product=IS110 family transposase;protein_id=WP_000156887.1;transl_table=11 NZ_CP116215.1 RefSeq gene 149921 152986 . - . ID=gene-PHA56_RS28870;Name=PHA56_RS28870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28870;old_locus_tag=PHA56_28870 NZ_CP116215.1 Protein Homology CDS 149921 152986 . - 0 ID=cds-WP_070083100.1;Parent=gene-PHA56_RS28870;Dbxref=Genbank:WP_070083100.1;Name=WP_070083100.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004186929.1;locus_tag=PHA56_RS28870;product=Tn3 family transposase;protein_id=WP_070083100.1;transl_table=11 NZ_CP116215.1 RefSeq gene 153154 153795 . + . ID=gene-PHA56_RS28875;Name=PHA56_RS28875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28875;old_locus_tag=PHA56_28875 NZ_CP116215.1 Protein Homology CDS 153154 153795 . + 0 ID=cds-WP_009651826.1;Parent=gene-PHA56_RS28875;Dbxref=Genbank:WP_009651826.1;Name=WP_009651826.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009651826.1;locus_tag=PHA56_RS28875;product=recombinase family protein;protein_id=WP_009651826.1;transl_table=11 NZ_CP116215.1 RefSeq gene 153910 154722 . + . ID=gene-PHA56_RS28880;Name=PHA56_RS28880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28880;old_locus_tag=PHA56_28880 NZ_CP116215.1 Protein Homology CDS 153910 154722 . + 0 ID=cds-WP_007372378.1;Parent=gene-PHA56_RS28880;Dbxref=Genbank:WP_007372378.1;Name=WP_007372378.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000100193.1;locus_tag=PHA56_RS28880;product=sulfite exporter TauE/SafE family protein;protein_id=WP_007372378.1;transl_table=11 NZ_CP116215.1 RefSeq gene 154742 155113 . + . ID=gene-PHA56_RS28885;Name=PHA56_RS28885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28885;old_locus_tag=PHA56_28885 NZ_CP116215.1 Protein Homology CDS 154742 155113 . + 0 ID=cds-WP_009651828.1;Parent=gene-PHA56_RS28885;Dbxref=Genbank:WP_009651828.1;Name=WP_009651828.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001036747.1;locus_tag=PHA56_RS28885;product=LysR family transcriptional regulator;protein_id=WP_009651828.1;transl_table=11 NZ_CP116215.1 RefSeq pseudogene 155251 156191 . + . ID=gene-PHA56_RS28890;Name=PHA56_RS28890;end_range=156191,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS28890;old_locus_tag=PHA56_28890;partial=true;pseudo=true NZ_CP116215.1 Protein Homology CDS 155251 156191 . + 0 ID=cds-PHA56_RS28890;Parent=gene-PHA56_RS28890;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=156191,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612074.1;locus_tag=PHA56_RS28890;partial=true;product=IS110 family transposase;pseudo=true;transl_table=11 NZ_CP116215.1 RefSeq pseudogene 156188 156567 . + . ID=gene-PHA56_RS28895;Name=PHA56_RS28895;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS28895;old_locus_tag=PHA56_28895;partial=true;pseudo=true;start_range=.,156188 NZ_CP116215.1 Protein Homology CDS 156188 156567 . + 0 ID=cds-PHA56_RS28895;Parent=gene-PHA56_RS28895;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229637.1;locus_tag=PHA56_RS28895;partial=true;product=transposase;pseudo=true;start_range=.,156188;transl_table=11 NZ_CP116215.1 RefSeq gene 157116 157739 . + . ID=gene-PHA56_RS28900;Name=PHA56_RS28900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28900;old_locus_tag=PHA56_28900 NZ_CP116215.1 Protein Homology CDS 157116 157739 . + 0 ID=cds-WP_007372374.1;Parent=gene-PHA56_RS28900;Dbxref=Genbank:WP_007372374.1;Name=WP_007372374.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007372374.1;locus_tag=PHA56_RS28900;product=FmdE family protein;protein_id=WP_007372374.1;transl_table=11 NZ_CP116215.1 RefSeq gene 157749 158489 . + . ID=gene-PHA56_RS28905;Name=PHA56_RS28905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28905;old_locus_tag=PHA56_28905 NZ_CP116215.1 Protein Homology CDS 157749 158489 . + 0 ID=cds-WP_032951290.1;Parent=gene-PHA56_RS28905;Dbxref=Genbank:WP_032951290.1;Name=WP_032951290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012545035.1;locus_tag=PHA56_RS28905;product=sulfite exporter TauE/SafE family protein;protein_id=WP_032951290.1;transl_table=11 NZ_CP116215.1 RefSeq pseudogene 158684 158986 . - . ID=gene-PHA56_RS28910;Name=PHA56_RS28910;end_range=158986,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS28910;old_locus_tag=PHA56_28910;partial=true;pseudo=true NZ_CP116215.1 Protein Homology CDS 158684 158986 . - 0 ID=cds-PHA56_RS28910;Parent=gene-PHA56_RS28910;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=158986,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012606398.1;locus_tag=PHA56_RS28910;partial=true;product=DDE-type integrase/transposase/recombinase;pseudo=true;transl_table=11 NZ_CP116215.1 RefSeq pseudogene 159000 159943 . - . ID=gene-PHA56_RS28915;Name=PHA56_RS28915;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS28915;old_locus_tag=PHA56_28915;pseudo=true NZ_CP116215.1 Protein Homology CDS 159000 159943 . - 0 ID=cds-PHA56_RS28915;Parent=gene-PHA56_RS28915;Note=frameshifted%3B internal stop;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558215.1;locus_tag=PHA56_RS28915;product=transposase;pseudo=true;transl_table=11 NZ_CP116215.1 RefSeq pseudogene 160035 160418 . - . ID=gene-PHA56_RS28920;Name=PHA56_RS28920;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS28920;old_locus_tag=PHA56_28920;partial=true;pseudo=true;start_range=.,160035 NZ_CP116215.1 Protein Homology CDS 160035 160418 . - 0 ID=cds-PHA56_RS28920;Parent=gene-PHA56_RS28920;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012606398.1;locus_tag=PHA56_RS28920;partial=true;product=IS6 family transposase;pseudo=true;start_range=.,160035;transl_table=11 NZ_CP116215.1 RefSeq gene 160513 162171 . - . ID=gene-PHA56_RS28925;Name=PHA56_RS28925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28925;old_locus_tag=PHA56_28925 NZ_CP116215.1 Protein Homology CDS 160513 162171 . - 0 ID=cds-WP_009652879.1;Parent=gene-PHA56_RS28925;Dbxref=Genbank:WP_009652879.1;Name=WP_009652879.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007372656.1;locus_tag=PHA56_RS28925;product=FAD-dependent oxidoreductase;protein_id=WP_009652879.1;transl_table=11 NZ_CP116215.1 RefSeq gene 162332 162682 . + . ID=gene-PHA56_RS28930;Name=PHA56_RS28930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28930;old_locus_tag=PHA56_28930 NZ_CP116215.1 Protein Homology CDS 162332 162682 . + 0 ID=cds-WP_032951288.1;Parent=gene-PHA56_RS28930;Dbxref=Genbank:WP_032951288.1;Name=WP_032951288.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000928911.1;locus_tag=PHA56_RS28930;product=metalloregulator ArsR/SmtB family transcription factor;protein_id=WP_032951288.1;transl_table=11 NZ_CP116215.1 RefSeq gene 162984 163460 . - . ID=gene-PHA56_RS28935;Name=PHA56_RS28935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28935;old_locus_tag=PHA56_28935 NZ_CP116215.1 Protein Homology CDS 162984 163460 . - 0 ID=cds-WP_009652867.1;Parent=gene-PHA56_RS28935;Dbxref=Genbank:WP_009652867.1;Name=WP_009652867.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000043178.1;locus_tag=PHA56_RS28935;product=DNA starvation/stationary phase protection protein;protein_id=WP_009652867.1;transl_table=11 NZ_CP116215.1 RefSeq gene 163575 163925 . - . ID=gene-PHA56_RS28940;Name=PHA56_RS28940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28940;old_locus_tag=PHA56_28940 NZ_CP116215.1 Protein Homology CDS 163575 163925 . - 0 ID=cds-WP_223195104.1;Parent=gene-PHA56_RS28940;Dbxref=Genbank:WP_223195104.1;Name=WP_223195104.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR00369.1;locus_tag=PHA56_RS28940;product=PaaI family thioesterase;protein_id=WP_223195104.1;transl_table=11 NZ_CP116215.1 RefSeq gene 164158 164619 . - . ID=gene-PHA56_RS28945;Name=PHA56_RS28945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28945;old_locus_tag=PHA56_28945 NZ_CP116215.1 Protein Homology CDS 164158 164619 . - 0 ID=cds-WP_009652880.1;Parent=gene-PHA56_RS28945;Dbxref=Genbank:WP_009652880.1;Name=WP_009652880.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013095208.1;locus_tag=PHA56_RS28945;product=NifB/NifX family molybdenum-iron cluster-binding protein;protein_id=WP_009652880.1;transl_table=11 NZ_CP116215.1 RefSeq gene 164594 164914 . - . ID=gene-PHA56_RS28950;Name=PHA56_RS28950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28950;old_locus_tag=PHA56_28950 NZ_CP116215.1 Protein Homology CDS 164594 164914 . - 0 ID=cds-WP_032951283.1;Parent=gene-PHA56_RS28950;Dbxref=Genbank:WP_032951283.1;Name=WP_032951283.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001137910.1;locus_tag=PHA56_RS28950;product=DUF134 domain-containing protein;protein_id=WP_032951283.1;transl_table=11 NZ_CP116215.1 RefSeq gene 165382 166179 . - . ID=gene-PHA56_RS28955;Name=PHA56_RS28955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28955;old_locus_tag=PHA56_28955 NZ_CP116215.1 Protein Homology CDS 165382 166179 . - 0 ID=cds-WP_009652868.1;Parent=gene-PHA56_RS28955;Dbxref=Genbank:WP_009652868.1;Name=WP_009652868.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008786832.1;locus_tag=PHA56_RS28955;product=sulfite exporter TauE/SafE family protein;protein_id=WP_009652868.1;transl_table=11 NZ_CP116215.1 RefSeq gene 166216 166647 . - . ID=gene-PHA56_RS28960;Name=PHA56_RS28960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28960;old_locus_tag=PHA56_28960 NZ_CP116215.1 Protein Homology CDS 166216 166647 . - 0 ID=cds-WP_032951278.1;Parent=gene-PHA56_RS28960;Dbxref=Genbank:WP_032951278.1;Name=WP_032951278.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009652881.1;locus_tag=PHA56_RS28960;product=membrane protein;protein_id=WP_032951278.1;transl_table=11 NZ_CP116215.1 RefSeq gene 166688 167116 . - . ID=gene-PHA56_RS28965;Name=PHA56_RS28965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28965;old_locus_tag=PHA56_28965 NZ_CP116215.1 Protein Homology CDS 166688 167116 . - 0 ID=cds-WP_032951277.1;Parent=gene-PHA56_RS28965;Dbxref=Genbank:WP_032951277.1;Name=WP_032951277.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008786830.1;locus_tag=PHA56_RS28965;product=hypothetical protein;protein_id=WP_032951277.1;transl_table=11 NZ_CP116215.1 RefSeq pseudogene 167106 167417 . - . ID=gene-PHA56_RS28970;Name=PHA56_RS28970;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS28970;old_locus_tag=PHA56_28970;pseudo=true NZ_CP116215.1 Protein Homology CDS 167106 167417 . - 0 ID=cds-PHA56_RS28970;Parent=gene-PHA56_RS28970;Note=internal stop;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008786829.1;locus_tag=PHA56_RS28970;product=metalloregulator ArsR/SmtB family transcription factor;pseudo=true;transl_table=11 NZ_CP116215.1 RefSeq pseudogene 167572 168430 . + . ID=gene-PHA56_RS28975;Name=PHA56_RS28975;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS28975;old_locus_tag=PHA56_28975;pseudo=true NZ_CP116215.1 Protein Homology CDS 167572 168430 . + 0 ID=cds-PHA56_RS28975;Parent=gene-PHA56_RS28975;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017735435.1;locus_tag=PHA56_RS28975;product=MBL fold metallo-hydrolase;pseudo=true;transl_table=11 NZ_CP116215.1 RefSeq gene 168474 168686 . + . ID=gene-PHA56_RS28980;Name=PHA56_RS28980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28980;old_locus_tag=PHA56_28980 NZ_CP116215.1 GeneMarkS-2+ CDS 168474 168686 . + 0 ID=cds-WP_223195099.1;Parent=gene-PHA56_RS28980;Dbxref=Genbank:WP_223195099.1;Name=WP_223195099.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PHA56_RS28980;product=hypothetical protein;protein_id=WP_223195099.1;transl_table=11 NZ_CP116215.1 RefSeq gene 168963 169430 . + . ID=gene-PHA56_RS28985;Name=PHA56_RS28985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28985;old_locus_tag=PHA56_28985 NZ_CP116215.1 Protein Homology CDS 168963 169430 . + 0 ID=cds-WP_050593594.1;Parent=gene-PHA56_RS28985;Dbxref=Genbank:WP_050593594.1;Name=WP_050593594.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: protein motif:HMM:NF019604.2;locus_tag=PHA56_RS28985;product=FAD-dependent oxidoreductase;protein_id=WP_050593594.1;transl_table=11 NZ_CP116215.1 cmsearch riboswitch 169577 169645 . + . ID=id-NZ_CP116215.1:169577..169645;Dbxref=RFAM:RF01734;Note=Fluoride riboswitches increase expression of downstream genes that help mitigate the toxic effects of very high levels of fluoride%3B They are found in a wide variety of bacteria and archaea;bound_moiety=fluoride;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NZ_CP116215.1 RefSeq gene 169723 170631 . + . ID=gene-PHA56_RS28990;Name=PHA56_RS28990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28990;old_locus_tag=PHA56_28990 NZ_CP116215.1 Protein Homology CDS 169723 170631 . + 0 ID=cds-WP_032951275.1;Parent=gene-PHA56_RS28990;Dbxref=Genbank:WP_032951275.1;Name=WP_032951275.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007372658.1;locus_tag=PHA56_RS28990;product=DHH family phosphoesterase;protein_id=WP_032951275.1;transl_table=11 NZ_CP116215.1 RefSeq gene 170628 171053 . + . ID=gene-PHA56_RS28995;Name=PHA56_RS28995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS28995;old_locus_tag=PHA56_28995 NZ_CP116215.1 Protein Homology CDS 170628 171053 . + 0 ID=cds-WP_009652877.1;Parent=gene-PHA56_RS28995;Dbxref=Genbank:WP_009652877.1;Name=WP_009652877.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010260813.1;locus_tag=PHA56_RS28995;product=universal stress protein;protein_id=WP_009652877.1;transl_table=11 NZ_CP116215.1 RefSeq gene 171070 172359 . + . ID=gene-PHA56_RS29000;Name=eno;gbkey=Gene;gene=eno;gene_biotype=protein_coding;locus_tag=PHA56_RS29000;old_locus_tag=PHA56_29000 NZ_CP116215.1 Protein Homology CDS 171070 172359 . + 0 ID=cds-WP_032951272.1;Parent=gene-PHA56_RS29000;Dbxref=Genbank:WP_032951272.1;Name=WP_032951272.1;Ontology_term=GO:0006096,GO:0004634;gbkey=CDS;gene=eno;go_function=phosphopyruvate hydratase activity|0004634||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009652875.1;locus_tag=PHA56_RS29000;product=phosphopyruvate hydratase;protein_id=WP_032951272.1;transl_table=11 NZ_CP116215.1 RefSeq gene 172464 172817 . + . ID=gene-PHA56_RS29005;Name=crcB;gbkey=Gene;gene=crcB;gene_biotype=protein_coding;locus_tag=PHA56_RS29005;old_locus_tag=PHA56_29005 NZ_CP116215.1 Protein Homology CDS 172464 172817 . + 0 ID=cds-WP_032951270.1;Parent=gene-PHA56_RS29005;Dbxref=Genbank:WP_032951270.1;Name=WP_032951270.1;Ontology_term=GO:0016020;gbkey=CDS;gene=crcB;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004118534.1;locus_tag=PHA56_RS29005;product=fluoride efflux transporter CrcB;protein_id=WP_032951270.1;transl_table=11 NZ_CP116215.1 RefSeq gene 173055 173777 . - . ID=gene-PHA56_RS29010;Name=arsH;gbkey=Gene;gene=arsH;gene_biotype=protein_coding;locus_tag=PHA56_RS29010;old_locus_tag=PHA56_29010 NZ_CP116215.1 Protein Homology CDS 173055 173777 . - 0 ID=cds-WP_032951268.1;Parent=gene-PHA56_RS29010;Dbxref=Genbank:WP_032951268.1;Name=WP_032951268.1;Ontology_term=GO:0003674;gbkey=CDS;gene=arsH;go_function=molecular_function|0003674||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014606053.1;locus_tag=PHA56_RS29010;product=arsenical resistance protein ArsH;protein_id=WP_032951268.1;transl_table=11 NZ_CP116215.1 RefSeq gene 173786 174109 . - . ID=gene-PHA56_RS29015;Name=PHA56_RS29015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29015;old_locus_tag=PHA56_29015 NZ_CP116215.1 Protein Homology CDS 173786 174109 . - 0 ID=cds-WP_032951265.1;Parent=gene-PHA56_RS29015;Dbxref=Genbank:WP_032951265.1;Name=WP_032951265.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007749362.1;locus_tag=PHA56_RS29015;product=metalloregulator ArsR/SmtB family transcription factor;protein_id=WP_032951265.1;transl_table=11 NZ_CP116215.1 RefSeq gene 174212 175225 . - . ID=gene-PHA56_RS29020;Name=PHA56_RS29020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29020;old_locus_tag=PHA56_29020 NZ_CP116215.1 Protein Homology CDS 174212 175225 . - 0 ID=cds-WP_032951263.1;Parent=gene-PHA56_RS29020;Dbxref=Genbank:WP_032951263.1;Name=WP_032951263.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016658919.1;locus_tag=PHA56_RS29020;product=permease;protein_id=WP_032951263.1;transl_table=11 NZ_CP116215.1 RefSeq gene 175503 176015 . - . ID=gene-PHA56_RS29025;Name=PHA56_RS29025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29025;old_locus_tag=PHA56_29025 NZ_CP116215.1 Protein Homology CDS 175503 176015 . - 0 ID=cds-WP_101677559.1;Parent=gene-PHA56_RS29025;Dbxref=Genbank:WP_101677559.1;Name=WP_101677559.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007372634.1;locus_tag=PHA56_RS29025;product=tyrosine-protein phosphatase;protein_id=WP_101677559.1;transl_table=11 NZ_CP116215.1 RefSeq gene 176154 176648 . - . ID=gene-PHA56_RS29030;Name=PHA56_RS29030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29030;old_locus_tag=PHA56_29030 NZ_CP116215.1 Protein Homology CDS 176154 176648 . - 0 ID=cds-WP_032951261.1;Parent=gene-PHA56_RS29030;Dbxref=Genbank:WP_032951261.1;Name=WP_032951261.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007372635.1;locus_tag=PHA56_RS29030;product=arsenate reductase ArsC;protein_id=WP_032951261.1;transl_table=11 NZ_CP116215.1 RefSeq gene 176721 177149 . - . ID=gene-PHA56_RS29035;Name=arsC;gbkey=Gene;gene=arsC;gene_biotype=protein_coding;locus_tag=PHA56_RS29035;old_locus_tag=PHA56_29035 NZ_CP116215.1 Protein Homology CDS 176721 177149 . - 0 ID=cds-WP_025714558.1;Parent=gene-PHA56_RS29035;Dbxref=Genbank:WP_025714558.1;Name=WP_025714558.1;Ontology_term=GO:0008794;gbkey=CDS;gene=arsC;go_function=arsenate reductase (glutaredoxin) activity|0008794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007372636.1;locus_tag=PHA56_RS29035;product=glutaredoxin-dependent arsenate reductase;protein_id=WP_025714558.1;transl_table=11 NZ_CP116215.1 RefSeq gene 177207 178496 . - . ID=gene-PHA56_RS29040;Name=PHA56_RS29040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29040;old_locus_tag=PHA56_29040 NZ_CP116215.1 Protein Homology CDS 177207 178496 . - 0 ID=cds-WP_032951259.1;Parent=gene-PHA56_RS29040;Dbxref=Genbank:WP_032951259.1;Name=WP_032951259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312401.1;locus_tag=PHA56_RS29040;product=arsenic transporter;protein_id=WP_032951259.1;transl_table=11 NZ_CP116215.1 RefSeq gene 178537 180303 . - . ID=gene-PHA56_RS29045;Name=arsA;gbkey=Gene;gene=arsA;gene_biotype=protein_coding;locus_tag=PHA56_RS29045;old_locus_tag=PHA56_29045 NZ_CP116215.1 Protein Homology CDS 178537 180303 . - 0 ID=cds-WP_032951359.1;Parent=gene-PHA56_RS29045;Dbxref=Genbank:WP_032951359.1;Name=WP_032951359.1;Ontology_term=GO:0071722,GO:0005524,GO:0015446,GO:0016887;gbkey=CDS;gene=arsA;go_function=ATP binding|0005524||IEA,ATPase-coupled arsenite transmembrane transporter activity|0015446||IEA,ATP hydrolysis activity|0016887||IEA;go_process=detoxification of arsenic-containing substance|0071722||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013095196.1;locus_tag=PHA56_RS29045;product=arsenical pump-driving ATPase;protein_id=WP_032951359.1;transl_table=11 NZ_CP116215.1 RefSeq gene 180327 180692 . - . ID=gene-PHA56_RS29050;Name=arsD;gbkey=Gene;gene=arsD;gene_biotype=protein_coding;locus_tag=PHA56_RS29050;old_locus_tag=PHA56_29050 NZ_CP116215.1 Protein Homology CDS 180327 180692 . - 0 ID=cds-WP_032951256.1;Parent=gene-PHA56_RS29050;Dbxref=Genbank:WP_032951256.1;Name=WP_032951256.1;Ontology_term=GO:0003677;gbkey=CDS;gene=arsD;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000855179.1;locus_tag=PHA56_RS29050;product=arsenite efflux transporter metallochaperone ArsD;protein_id=WP_032951256.1;transl_table=11 NZ_CP116215.1 RefSeq gene 180717 181196 . - . ID=gene-PHA56_RS29055;Name=PHA56_RS29055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29055;old_locus_tag=PHA56_29055 NZ_CP116215.1 Protein Homology CDS 180717 181196 . - 0 ID=cds-WP_032951254.1;Parent=gene-PHA56_RS29055;Dbxref=Genbank:WP_032951254.1;Name=WP_032951254.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013095198.1;locus_tag=PHA56_RS29055;product=arsenate reductase ArsC;protein_id=WP_032951254.1;transl_table=11 NZ_CP116215.1 RefSeq gene 181253 181606 . - . ID=gene-PHA56_RS29060;Name=PHA56_RS29060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29060;old_locus_tag=PHA56_29060 NZ_CP116215.1 Protein Homology CDS 181253 181606 . - 0 ID=cds-WP_025714553.1;Parent=gene-PHA56_RS29060;Dbxref=Genbank:WP_025714553.1;Name=WP_025714553.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013095199.1;locus_tag=PHA56_RS29060;product=metalloregulator ArsR/SmtB family transcription factor;protein_id=WP_025714553.1;transl_table=11 NZ_CP116215.1 RefSeq gene 181725 181907 . + . ID=gene-PHA56_RS29065;Name=PHA56_RS29065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29065;old_locus_tag=PHA56_29065 NZ_CP116215.1 Protein Homology CDS 181725 181907 . + 0 ID=cds-WP_025714552.1;Parent=gene-PHA56_RS29065;Dbxref=Genbank:WP_025714552.1;Name=WP_025714552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013095200.1;locus_tag=PHA56_RS29065;product=hypothetical protein;protein_id=WP_025714552.1;transl_table=11 NZ_CP116215.1 RefSeq gene 182025 182567 . + . ID=gene-PHA56_RS29070;Name=PHA56_RS29070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29070;old_locus_tag=PHA56_29070 NZ_CP116215.1 Protein Homology CDS 182025 182567 . + 0 ID=cds-WP_032951250.1;Parent=gene-PHA56_RS29070;Dbxref=Genbank:WP_032951250.1;Name=WP_032951250.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017788464.1;locus_tag=PHA56_RS29070;product=sigma-70 family RNA polymerase sigma factor;protein_id=WP_032951250.1;transl_table=11 NZ_CP116215.1 RefSeq gene 182724 183725 . + . ID=gene-PHA56_RS29075;Name=PHA56_RS29075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29075;old_locus_tag=PHA56_29075 NZ_CP116215.1 Protein Homology CDS 182724 183725 . + 0 ID=cds-WP_032951239.1;Parent=gene-PHA56_RS29075;Dbxref=Genbank:WP_032951239.1;Name=WP_032951239.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013095204.1;locus_tag=PHA56_RS29075;product=permease;protein_id=WP_032951239.1;transl_table=11 NZ_CP116215.1 RefSeq gene 183739 183969 . + . ID=gene-PHA56_RS29080;Name=PHA56_RS29080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29080;old_locus_tag=PHA56_29080 NZ_CP116215.1 Protein Homology CDS 183739 183969 . + 0 ID=cds-WP_021314637.1;Parent=gene-PHA56_RS29080;Dbxref=Genbank:WP_021314637.1;Name=WP_021314637.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007372646.1;locus_tag=PHA56_RS29080;product=thioredoxin family protein;protein_id=WP_021314637.1;transl_table=11 NZ_CP116215.1 RefSeq gene 184247 184435 . - . ID=gene-PHA56_RS29085;Name=PHA56_RS29085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29085;old_locus_tag=PHA56_29085 NZ_CP116215.1 Protein Homology CDS 184247 184435 . - 0 ID=cds-WP_223226815.1;Parent=gene-PHA56_RS29085;Dbxref=Genbank:WP_223226815.1;Name=WP_223226815.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007372647.1;locus_tag=PHA56_RS29085;product=hypothetical protein;protein_id=WP_223226815.1;transl_table=11 NZ_CP116215.1 RefSeq gene 184532 185359 . - . ID=gene-PHA56_RS29090;Name=PHA56_RS29090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29090;old_locus_tag=PHA56_29090 NZ_CP116215.1 Protein Homology CDS 184532 185359 . - 0 ID=cds-WP_032951234.1;Parent=gene-PHA56_RS29090;Dbxref=Genbank:WP_032951234.1;Name=WP_032951234.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001066652.1;locus_tag=PHA56_RS29090;product=universal stress protein;protein_id=WP_032951234.1;transl_table=11 NZ_CP116215.1 RefSeq gene 185377 186855 . - . ID=gene-PHA56_RS29095;Name=PHA56_RS29095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29095;old_locus_tag=PHA56_29095 NZ_CP116215.1 Protein Homology CDS 185377 186855 . - 0 ID=cds-WP_032951231.1;Parent=gene-PHA56_RS29095;Dbxref=Genbank:WP_032951231.1;Name=WP_032951231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008786570.1;locus_tag=PHA56_RS29095;product=SulP family inorganic anion transporter;protein_id=WP_032951231.1;transl_table=11 NZ_CP116215.1 RefSeq gene 187361 188383 . + . ID=gene-PHA56_RS29100;Name=PHA56_RS29100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29100;old_locus_tag=PHA56_29100 NZ_CP116215.1 Protein Homology CDS 187361 188383 . + 0 ID=cds-WP_000156887.1-3;Parent=gene-PHA56_RS29100;Dbxref=Genbank:WP_000156887.1;Name=WP_000156887.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612074.1;locus_tag=PHA56_RS29100;product=IS110 family transposase;protein_id=WP_000156887.1;transl_table=11 NZ_CP116215.1 RefSeq gene 188759 190441 . - . ID=gene-PHA56_RS29105;Name=PHA56_RS29105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29105;old_locus_tag=PHA56_29105 NZ_CP116215.1 Protein Homology CDS 188759 190441 . - 0 ID=cds-WP_070083098.1;Parent=gene-PHA56_RS29105;Dbxref=Genbank:WP_070083098.1;Name=WP_070083098.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: protein motif:HMM:NF024140.2;locus_tag=PHA56_RS29105;product=methyl-accepting chemotaxis protein;protein_id=WP_070083098.1;transl_table=11 NZ_CP116215.1 RefSeq gene 190803 191507 . + . ID=gene-PHA56_RS29110;Name=PHA56_RS29110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29110;old_locus_tag=PHA56_29110 NZ_CP116215.1 Protein Homology CDS 190803 191507 . + 0 ID=cds-WP_059331711.1;Parent=gene-PHA56_RS29110;Dbxref=Genbank:WP_059331711.1;Name=WP_059331711.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221000.1;locus_tag=PHA56_RS29110;product=IS6-like element IS26 family transposase;protein_id=WP_059331711.1;transl_table=11 NZ_CP116215.1 RefSeq gene 191806 193488 . + . ID=gene-PHA56_RS29115;Name=PHA56_RS29115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29115;old_locus_tag=PHA56_29115 NZ_CP116215.1 Protein Homology CDS 191806 193488 . + 0 ID=cds-WP_010791757.1;Parent=gene-PHA56_RS29115;Dbxref=Genbank:WP_010791757.1;Name=WP_010791757.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013124600.1;locus_tag=PHA56_RS29115;product=DDE-type integrase/transposase/recombinase;protein_id=WP_010791757.1;transl_table=11 NZ_CP116215.1 RefSeq gene 193491 194399 . + . ID=gene-PHA56_RS29120;Name=PHA56_RS29120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29120;old_locus_tag=PHA56_29120 NZ_CP116215.1 Protein Homology CDS 193491 194399 . + 0 ID=cds-WP_000393453.1;Parent=gene-PHA56_RS29120;Dbxref=Genbank:WP_000393453.1;Name=WP_000393453.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003155746.1;locus_tag=PHA56_RS29120;product=TniB family NTP-binding protein;protein_id=WP_000393453.1;transl_table=11 NZ_CP116215.1 RefSeq gene 194396 195613 . + . ID=gene-PHA56_RS29125;Name=PHA56_RS29125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29125;old_locus_tag=PHA56_29125 NZ_CP116215.1 Protein Homology CDS 194396 195613 . + 0 ID=cds-WP_011405615.1;Parent=gene-PHA56_RS29125;Dbxref=Genbank:WP_011405615.1;Name=WP_011405615.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011517528.1;locus_tag=PHA56_RS29125;product=TniQ family protein;protein_id=WP_011405615.1;transl_table=11 NZ_CP116215.1 RefSeq gene 195674 196288 . + . ID=gene-PHA56_RS29130;Name=PHA56_RS29130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29130;old_locus_tag=PHA56_29130 NZ_CP116215.1 Protein Homology CDS 195674 196288 . + 0 ID=cds-WP_010981357.1;Parent=gene-PHA56_RS29130;Dbxref=Genbank:WP_010981357.1;Name=WP_010981357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000904941.1;locus_tag=PHA56_RS29130;product=recombinase family protein;protein_id=WP_010981357.1;transl_table=11 NZ_CP116215.1 RefSeq gene 196327 196530 . - . ID=gene-PHA56_RS29135;Name=PHA56_RS29135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29135;old_locus_tag=PHA56_29135 NZ_CP116215.1 Protein Homology CDS 196327 196530 . - 0 ID=cds-WP_005413391.1;Parent=gene-PHA56_RS29135;Dbxref=Genbank:WP_005413391.1;Name=WP_005413391.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023237.2;locus_tag=PHA56_RS29135;product=DUF3330 domain-containing protein;protein_id=WP_005413391.1;transl_table=11 NZ_CP116215.1 RefSeq gene 196663 196899 . - . ID=gene-PHA56_RS29140;Name=merE;gbkey=Gene;gene=merE;gene_biotype=protein_coding;locus_tag=PHA56_RS29140;old_locus_tag=PHA56_29140 NZ_CP116215.1 Protein Homology CDS 196663 196899 . - 0 ID=cds-WP_005413392.1;Parent=gene-PHA56_RS29140;Dbxref=Genbank:WP_005413392.1;Name=WP_005413392.1;gbkey=CDS;gene=merE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001087808.1;locus_tag=PHA56_RS29140;product=broad-spectrum mercury transporter MerE;protein_id=WP_005413392.1;transl_table=11 NZ_CP116215.1 RefSeq gene 196896 197261 . - . ID=gene-PHA56_RS29145;Name=merD;gbkey=Gene;gene=merD;gene_biotype=protein_coding;locus_tag=PHA56_RS29145;old_locus_tag=PHA56_29145 NZ_CP116215.1 Protein Homology CDS 196896 197261 . - 0 ID=cds-WP_000995361.1;Parent=gene-PHA56_RS29145;Dbxref=Genbank:WP_000995361.1;Name=WP_000995361.1;Ontology_term=GO:0006355,GO:0045892,GO:0003677;gbkey=CDS;gene=merD;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001277466.1;locus_tag=PHA56_RS29145;product=mercury resistance co-regulator MerD;protein_id=WP_000995361.1;transl_table=11 NZ_CP116215.1 RefSeq gene 197373 198011 . - . ID=gene-PHA56_RS29150;Name=merB;gbkey=Gene;gene=merB;gene_biotype=protein_coding;locus_tag=PHA56_RS29150;old_locus_tag=PHA56_29150 NZ_CP116215.1 Protein Homology CDS 197373 198011 . - 0 ID=cds-WP_000761850.1;Parent=gene-PHA56_RS29150;Dbxref=Genbank:WP_000761850.1;Name=WP_000761850.1;Ontology_term=GO:0018942;gbkey=CDS;gene=merB;go_process=organometal metabolic process|0018942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015062793.1;locus_tag=PHA56_RS29150;product=organomercurial lyase MerB;protein_id=WP_000761850.1;transl_table=11 NZ_CP116215.1 RefSeq pseudogene 198026 198268 . - . ID=gene-PHA56_RS29155;Name=PHA56_RS29155;end_range=198268,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS29155;old_locus_tag=PHA56_29155;partial=true;pseudo=true NZ_CP116215.1 Protein Homology CDS 198026 198268 . - 0 ID=cds-PHA56_RS29155;Parent=gene-PHA56_RS29155;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=198268,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012537218.1;locus_tag=PHA56_RS29155;partial=true;product=mercuric reductase;pseudo=true;transl_table=11 NZ_CP116215.1 RefSeq gene 198309 198743 . + . ID=gene-PHA56_RS29160;Name=PHA56_RS29160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29160;old_locus_tag=PHA56_29160 NZ_CP116215.1 Protein Homology CDS 198309 198743 . + 0 ID=cds-WP_010981353.1;Parent=gene-PHA56_RS29160;Dbxref=Genbank:WP_010981353.1;Name=WP_010981353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010981353.1;locus_tag=PHA56_RS29160;product=mercury resistance transcriptional regulator MerR;protein_id=WP_010981353.1;transl_table=11 NZ_CP116215.1 RefSeq gene 198822 199826 . + . ID=gene-PHA56_RS29165;Name=PHA56_RS29165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29165;old_locus_tag=PHA56_29165 NZ_CP116215.1 Protein Homology CDS 198822 199826 . + 0 ID=cds-WP_000427623.1-3;Parent=gene-PHA56_RS29165;Dbxref=Genbank:WP_000427623.1;Name=WP_000427623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229637.1;locus_tag=PHA56_RS29165;product=IS110-like element IS4321 family transposase;protein_id=WP_000427623.1;transl_table=11 NZ_CP116215.1 RefSeq gene 200112 200483 . + . ID=gene-PHA56_RS29170;Name=PHA56_RS29170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29170;old_locus_tag=PHA56_29170 NZ_CP116215.1 Protein Homology CDS 200112 200483 . + 0 ID=cds-WP_223259313.1;Parent=gene-PHA56_RS29170;Dbxref=Genbank:WP_223259313.1;Name=WP_223259313.1;Ontology_term=GO:0005524,GO:0016787;gbkey=CDS;go_function=ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: protein motif:HMM:NF024754.2;locus_tag=PHA56_RS29170;product=3'-5' exonuclease;protein_id=WP_223259313.1;transl_table=11 NZ_CP116215.1 RefSeq gene 200486 200740 . - . ID=gene-PHA56_RS29175;Name=PHA56_RS29175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29175;old_locus_tag=PHA56_29175 NZ_CP116215.1 Protein Homology CDS 200486 200740 . - 0 ID=cds-WP_000880375.1;Parent=gene-PHA56_RS29175;Dbxref=Genbank:WP_000880375.1;Name=WP_000880375.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000880375.1;locus_tag=PHA56_RS29175;product=hypothetical protein;protein_id=WP_000880375.1;transl_table=11 NZ_CP116215.1 RefSeq pseudogene 200866 201101 . - . ID=gene-PHA56_RS29180;Name=PHA56_RS29180;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS29180;old_locus_tag=PHA56_29180;partial=true;pseudo=true;start_range=.,200866 NZ_CP116215.1 Protein Homology CDS 200866 201101 . - 0 ID=cds-PHA56_RS29180;Parent=gene-PHA56_RS29180;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016162084.1;locus_tag=PHA56_RS29180;partial=true;product=type I restriction-modification system subunit M N-terminal domain-containing protein;pseudo=true;start_range=.,200866;transl_table=11 NZ_CP116215.1 RefSeq gene 201727 202068 . + . ID=gene-PHA56_RS29185;Name=PHA56_RS29185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29185;old_locus_tag=PHA56_29185 NZ_CP116215.1 Protein Homology CDS 201727 202068 . + 0 ID=cds-WP_001151572.1;Parent=gene-PHA56_RS29185;Dbxref=Genbank:WP_001151572.1;Name=WP_001151572.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001151572.1;locus_tag=PHA56_RS29185;product=hypothetical protein;protein_id=WP_001151572.1;transl_table=11 NZ_CP116215.1 RefSeq gene 202160 202351 . + . ID=gene-PHA56_RS29190;Name=PHA56_RS29190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29190;old_locus_tag=PHA56_29190 NZ_CP116215.1 Protein Homology CDS 202160 202351 . + 0 ID=cds-WP_000398479.1;Parent=gene-PHA56_RS29190;Dbxref=Genbank:WP_000398479.1;Name=WP_000398479.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008786869.1;locus_tag=PHA56_RS29190;product=hypothetical protein;protein_id=WP_000398479.1;transl_table=11 NZ_CP116215.1 RefSeq gene 202592 203047 . - . ID=gene-PHA56_RS29195;Name=PHA56_RS29195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29195;old_locus_tag=PHA56_29195 NZ_CP116215.1 Protein Homology CDS 202592 203047 . - 0 ID=cds-WP_000374058.1;Parent=gene-PHA56_RS29195;Dbxref=Genbank:WP_000374058.1;Name=WP_000374058.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000374058.1;locus_tag=PHA56_RS29195;product=hypothetical protein;protein_id=WP_000374058.1;transl_table=11 NZ_CP116215.1 RefSeq gene 203138 204379 . - . ID=gene-PHA56_RS29200;Name=PHA56_RS29200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29200;old_locus_tag=PHA56_29200 NZ_CP116215.1 Protein Homology CDS 203138 204379 . - 0 ID=cds-WP_001053340.1;Parent=gene-PHA56_RS29200;Dbxref=Genbank:WP_001053340.1;Name=WP_001053340.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001053346.1;locus_tag=PHA56_RS29200;product=VWA domain-containing protein;protein_id=WP_001053340.1;transl_table=11 NZ_CP116215.1 RefSeq pseudogene 204808 204894 . - . ID=gene-PHA56_RS29205;Name=PHA56_RS29205;end_range=204894,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS29205;old_locus_tag=PHA56_29205;partial=true;pseudo=true NZ_CP116215.1 Protein Homology CDS 204808 204894 . - 0 ID=cds-PHA56_RS29205;Parent=gene-PHA56_RS29205;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=204894,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309383.1;locus_tag=PHA56_RS29205;partial=true;product=TerD family protein;pseudo=true;transl_table=11 NZ_CP116215.1 RefSeq gene 204968 206088 . + . ID=gene-PHA56_RS29210;Name=PHA56_RS29210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29210;old_locus_tag=PHA56_29210 NZ_CP116215.1 Protein Homology CDS 204968 205226 . + 0 ID=cds-WP_085956072.1-9;Parent=gene-PHA56_RS29210;Dbxref=Genbank:WP_085956072.1;Name=WP_085956072.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611473.1;locus_tag=PHA56_RS29210;product=IS3-like element ISKpn34 family transposase;protein_id=WP_085956072.1;transl_table=11 NZ_CP116215.1 Protein Homology CDS 205226 206088 . + 2 ID=cds-WP_085956072.1-9;Parent=gene-PHA56_RS29210;Dbxref=Genbank:WP_085956072.1;Name=WP_085956072.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611473.1;locus_tag=PHA56_RS29210;product=IS3-like element ISKpn34 family transposase;protein_id=WP_085956072.1;transl_table=11 NZ_CP116215.1 RefSeq gene 206098 207009 . - . ID=gene-PHA56_RS29215;Name=PHA56_RS29215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29215;old_locus_tag=PHA56_29215 NZ_CP116215.1 Protein Homology CDS 206098 207009 . - 0 ID=cds-WP_271292988.1;Parent=gene-PHA56_RS29215;Dbxref=Genbank:WP_271292988.1;Name=WP_271292988.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000149831.1;locus_tag=PHA56_RS29215;product=hypothetical protein;protein_id=WP_271292988.1;transl_table=11 NZ_CP116215.1 RefSeq gene 207240 208441 . + . ID=gene-PHA56_RS29220;Name=PHA56_RS29220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29220;old_locus_tag=PHA56_29220 NZ_CP116215.1 Protein Homology CDS 207240 207555 . + 0 ID=cds-WP_096913407.1-4;Parent=gene-PHA56_RS29220;Dbxref=Genbank:WP_096913407.1;Name=WP_096913407.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558215.1;locus_tag=PHA56_RS29220;product=IS3 family transposase;protein_id=WP_096913407.1;transl_table=11 NZ_CP116215.1 Protein Homology CDS 207555 208441 . + 2 ID=cds-WP_096913407.1-4;Parent=gene-PHA56_RS29220;Dbxref=Genbank:WP_096913407.1;Name=WP_096913407.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558215.1;locus_tag=PHA56_RS29220;product=IS3 family transposase;protein_id=WP_096913407.1;transl_table=11 NZ_CP116215.1 RefSeq gene 208516 209454 . - . ID=gene-PHA56_RS29225;Name=PHA56_RS29225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29225;old_locus_tag=PHA56_29225 NZ_CP116215.1 Protein Homology CDS 208516 209454 . - 0 ID=cds-WP_000472041.1;Parent=gene-PHA56_RS29225;Dbxref=Genbank:WP_000472041.1;Name=WP_000472041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000472041.1;locus_tag=PHA56_RS29225;product=hypothetical protein;protein_id=WP_000472041.1;transl_table=11 NZ_CP116215.1 RefSeq gene 209521 210441 . - . ID=gene-PHA56_RS29230;Name=PHA56_RS29230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29230;old_locus_tag=PHA56_29230 NZ_CP116215.1 Protein Homology CDS 209521 210441 . - 0 ID=cds-WP_000991697.1;Parent=gene-PHA56_RS29230;Dbxref=Genbank:WP_000991697.1;Name=WP_000991697.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000991697.1;locus_tag=PHA56_RS29230;product=hypothetical protein;protein_id=WP_000991697.1;transl_table=11 NZ_CP116215.1 RefSeq gene 210510 211445 . - . ID=gene-PHA56_RS29235;Name=PHA56_RS29235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29235;old_locus_tag=PHA56_29235 NZ_CP116215.1 Protein Homology CDS 210510 211445 . - 0 ID=cds-WP_070083092.1;Parent=gene-PHA56_RS29235;Dbxref=Genbank:WP_070083092.1;Name=WP_070083092.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000691118.1;locus_tag=PHA56_RS29235;product=hypothetical protein;protein_id=WP_070083092.1;transl_table=11 NZ_CP116215.1 RefSeq gene 211515 212393 . - . ID=gene-PHA56_RS29240;Name=PHA56_RS29240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29240;old_locus_tag=PHA56_29240 NZ_CP116215.1 Protein Homology CDS 211515 212393 . - 0 ID=cds-WP_000762003.1;Parent=gene-PHA56_RS29240;Dbxref=Genbank:WP_000762003.1;Name=WP_000762003.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000762003.1;locus_tag=PHA56_RS29240;product=hypothetical protein;protein_id=WP_000762003.1;transl_table=11 NZ_CP116215.1 RefSeq gene 212472 212993 . - . ID=gene-PHA56_RS29245;Name=PHA56_RS29245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29245;old_locus_tag=PHA56_29245 NZ_CP116215.1 Protein Homology CDS 212472 212993 . - 0 ID=cds-WP_001011130.1;Parent=gene-PHA56_RS29245;Dbxref=Genbank:WP_001011130.1;Name=WP_001011130.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001010933.1;locus_tag=PHA56_RS29245;product=hypothetical protein;protein_id=WP_001011130.1;transl_table=11 NZ_CP116215.1 RefSeq gene 213263 214495 . - . ID=gene-PHA56_RS29250;Name=PHA56_RS29250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29250;old_locus_tag=PHA56_29250 NZ_CP116215.1 Protein Homology CDS 213263 214495 . - 0 ID=cds-WP_000220379.1;Parent=gene-PHA56_RS29250;Dbxref=Genbank:WP_000220379.1;Name=WP_000220379.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000220381.1;locus_tag=PHA56_RS29250;product=toprim domain-containing protein;protein_id=WP_000220379.1;transl_table=11 NZ_CP116215.1 RefSeq gene 214609 214830 . - . ID=gene-PHA56_RS29255;Name=PHA56_RS29255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29255;old_locus_tag=PHA56_29255 NZ_CP116215.1 Protein Homology CDS 214609 214830 . - 0 ID=cds-WP_000192120.1;Parent=gene-PHA56_RS29255;Dbxref=Genbank:WP_000192120.1;Name=WP_000192120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000192121.1;locus_tag=PHA56_RS29255;product=hypothetical protein;protein_id=WP_000192120.1;transl_table=11 NZ_CP116215.1 RefSeq gene 214903 216909 . - . ID=gene-PHA56_RS29260;Name=PHA56_RS29260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29260;old_locus_tag=PHA56_29260 NZ_CP116215.1 Protein Homology CDS 214903 216909 . - 0 ID=cds-WP_070083091.1;Parent=gene-PHA56_RS29260;Dbxref=Genbank:WP_070083091.1;Name=WP_070083091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000762700.1;locus_tag=PHA56_RS29260;product=VWA domain-containing protein;protein_id=WP_070083091.1;transl_table=11 NZ_CP116215.1 RefSeq gene 216987 218114 . - . ID=gene-PHA56_RS29265;Name=PHA56_RS29265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29265;old_locus_tag=PHA56_29265 NZ_CP116215.1 Protein Homology CDS 216987 218114 . - 0 ID=cds-WP_000174396.1;Parent=gene-PHA56_RS29265;Dbxref=Genbank:WP_000174396.1;Name=WP_000174396.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000174395.1;locus_tag=PHA56_RS29265;product=DUF3150 domain-containing protein;protein_id=WP_000174396.1;transl_table=11 NZ_CP116215.1 RefSeq gene 218178 218351 . - . ID=gene-PHA56_RS29270;Name=PHA56_RS29270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29270;old_locus_tag=PHA56_29270 NZ_CP116215.1 Protein Homology CDS 218178 218351 . - 0 ID=cds-WP_001176645.1;Parent=gene-PHA56_RS29270;Dbxref=Genbank:WP_001176645.1;Name=WP_001176645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001176645.1;locus_tag=PHA56_RS29270;product=hypothetical protein;protein_id=WP_001176645.1;transl_table=11 NZ_CP116215.1 RefSeq gene 218636 219340 . + . ID=gene-PHA56_RS29275;Name=PHA56_RS29275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29275;old_locus_tag=PHA56_29275 NZ_CP116215.1 Protein Homology CDS 218636 219340 . + 0 ID=cds-WP_059331711.1-2;Parent=gene-PHA56_RS29275;Dbxref=Genbank:WP_059331711.1;Name=WP_059331711.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221000.1;locus_tag=PHA56_RS29275;product=IS6-like element IS26 family transposase;protein_id=WP_059331711.1;transl_table=11 NZ_CP116215.1 RefSeq gene 219346 220275 . + . ID=gene-PHA56_RS29280;Name=PHA56_RS29280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29280;old_locus_tag=PHA56_29280 NZ_CP116215.1 Protein Homology CDS 219346 220275 . + 0 ID=cds-WP_230324202.1;Parent=gene-PHA56_RS29280;Dbxref=Genbank:WP_230324202.1;Name=WP_230324202.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032491235.1;locus_tag=PHA56_RS29280;product=IS5 family transposase;protein_id=WP_230324202.1;transl_table=11 NZ_CP116215.1 RefSeq gene 221346 222917 . - . ID=gene-PHA56_RS29285;Name=PHA56_RS29285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29285;old_locus_tag=PHA56_29285 NZ_CP116215.1 Protein Homology CDS 221346 222917 . - 0 ID=cds-WP_044066950.1;Parent=gene-PHA56_RS29285;Dbxref=Genbank:WP_044066950.1;Name=WP_044066950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904571.1;locus_tag=PHA56_RS29285;product=IS66-like element ISCro1 family transposase;protein_id=WP_044066950.1;transl_table=11 NZ_CP116215.1 RefSeq gene 222937 223284 . - . ID=gene-PHA56_RS29290;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=protein_coding;locus_tag=PHA56_RS29290;old_locus_tag=PHA56_29290 NZ_CP116215.1 Protein Homology CDS 222937 223284 . - 0 ID=cds-WP_000624622.1;Parent=gene-PHA56_RS29290;Dbxref=Genbank:WP_000624622.1;Name=WP_000624622.1;Note=TnpB%2C as the term is used for proteins encoded by IS66 family insertion elements%2C is considered an accessory protein%2C since TnpC%2C encoded by a neighboring gene%2C is a DDE family transposase.;gbkey=CDS;gene=tnpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858152.1;locus_tag=PHA56_RS29290;product=IS66 family insertion sequence element accessory protein TnpB;protein_id=WP_000624622.1;transl_table=11 NZ_CP116215.1 RefSeq gene 223284 223961 . - . ID=gene-PHA56_RS29295;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=PHA56_RS29295;old_locus_tag=PHA56_29295 NZ_CP116215.1 Protein Homology CDS 223284 223961 . - 0 ID=cds-WP_106904188.1;Parent=gene-PHA56_RS29295;Dbxref=Genbank:WP_106904188.1;Name=WP_106904188.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;gene=tnpA;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743492.1;locus_tag=PHA56_RS29295;product=IS66-like element accessory protein TnpA;protein_id=WP_106904188.1;transl_table=11 NZ_CP116215.1 RefSeq pseudogene 224048 224733 . + . ID=gene-PHA56_RS29300;Name=PHA56_RS29300;end_range=224733,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS29300;old_locus_tag=PHA56_29300;partial=true;pseudo=true NZ_CP116215.1 Protein Homology CDS 224048 224733 . + 0 ID=cds-PHA56_RS29300;Parent=gene-PHA56_RS29300;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=224733,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611384.1;locus_tag=PHA56_RS29300;partial=true;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_CP116215.1 RefSeq gene 225406 226914 . + . ID=gene-PHA56_RS29305;Name=ltrA;gbkey=Gene;gene=ltrA;gene_biotype=protein_coding;locus_tag=PHA56_RS29305;old_locus_tag=PHA56_29305 NZ_CP116215.1 Protein Homology CDS 225406 226914 . + 0 ID=cds-WP_001189109.1;Parent=gene-PHA56_RS29305;Dbxref=Genbank:WP_001189109.1;Name=WP_001189109.1;Ontology_term=GO:0000373,GO:0003964;gbkey=CDS;gene=ltrA;go_function=RNA-directed DNA polymerase activity|0003964||IEA;go_process=Group II intron splicing|0000373||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708749.1;locus_tag=PHA56_RS29305;product=group II intron reverse transcriptase/maturase;protein_id=WP_001189109.1;transl_table=11 NZ_CP116215.1 RefSeq pseudogene 226995 227492 . + . ID=gene-PHA56_RS29310;Name=PHA56_RS29310;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS29310;old_locus_tag=PHA56_29310;partial=true;pseudo=true;start_range=.,226995 NZ_CP116215.1 Protein Homology CDS 226995 227492 . + 0 ID=cds-PHA56_RS29310;Parent=gene-PHA56_RS29310;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011341074.1;locus_tag=PHA56_RS29310;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,226995;transl_table=11 NZ_CP116215.1 RefSeq gene 227707 227976 . + . ID=gene-PHA56_RS29315;Name=PHA56_RS29315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29315;old_locus_tag=PHA56_29315 NZ_CP116215.1 Protein Homology CDS 227707 227976 . + 0 ID=cds-WP_048213818.1;Parent=gene-PHA56_RS29315;Dbxref=Genbank:WP_048213818.1;Name=WP_048213818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001303459.1;locus_tag=PHA56_RS29315;product=DUF1778 domain-containing protein;protein_id=WP_048213818.1;transl_table=11 NZ_CP116215.1 RefSeq gene 227980 228510 . + . ID=gene-PHA56_RS29320;Name=PHA56_RS29320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29320;old_locus_tag=PHA56_29320 NZ_CP116215.1 Protein Homology CDS 227980 228510 . + 0 ID=cds-WP_048213819.1;Parent=gene-PHA56_RS29320;Dbxref=Genbank:WP_048213819.1;Name=WP_048213819.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000348879.1;locus_tag=PHA56_RS29320;product=GNAT family N-acetyltransferase;protein_id=WP_048213819.1;transl_table=11 NZ_CP116215.1 RefSeq gene 228595 229599 . - . ID=gene-PHA56_RS29325;Name=PHA56_RS29325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29325;old_locus_tag=PHA56_29325 NZ_CP116215.1 Protein Homology CDS 228595 229599 . - 0 ID=cds-WP_048213820.1;Parent=gene-PHA56_RS29325;Dbxref=Genbank:WP_048213820.1;Name=WP_048213820.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000145248.1;locus_tag=PHA56_RS29325;product=hypothetical protein;protein_id=WP_048213820.1;transl_table=11 NZ_CP116215.1 RefSeq gene 229604 229849 . - . ID=gene-PHA56_RS29330;Name=PHA56_RS29330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29330;old_locus_tag=PHA56_29330 NZ_CP116215.1 Protein Homology CDS 229604 229849 . - 0 ID=cds-WP_048213821.1;Parent=gene-PHA56_RS29330;Dbxref=Genbank:WP_048213821.1;Name=WP_048213821.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000368361.1;locus_tag=PHA56_RS29330;product=hypothetical protein;protein_id=WP_048213821.1;transl_table=11 NZ_CP116215.1 RefSeq gene 230608 231975 . - . ID=gene-PHA56_RS29335;Name=PHA56_RS29335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29335;old_locus_tag=PHA56_29335 NZ_CP116215.1 Protein Homology CDS 230608 231975 . - 0 ID=cds-WP_230324193.1;Parent=gene-PHA56_RS29335;Dbxref=Genbank:WP_230324193.1;Name=WP_230324193.1;Ontology_term=GO:0009190,GO:0035556;gbkey=CDS;go_process=cyclic nucleotide biosynthetic process|0009190||IEA,intracellular signal transduction|0035556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020884633.1;locus_tag=PHA56_RS29335;product=adenylate/guanylate cyclase domain-containing protein;protein_id=WP_230324193.1;transl_table=11 NZ_CP116215.1 RefSeq gene 231985 232518 . - . ID=gene-PHA56_RS29340;Name=PHA56_RS29340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29340;old_locus_tag=PHA56_29340 NZ_CP116215.1 Protein Homology CDS 231985 232518 . - 0 ID=cds-WP_048213822.1;Parent=gene-PHA56_RS29340;Dbxref=Genbank:WP_048213822.1;Name=WP_048213822.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020884632.1;locus_tag=PHA56_RS29340;product=hypothetical protein;protein_id=WP_048213822.1;transl_table=11 NZ_CP116215.1 RefSeq gene 232874 233929 . + . ID=gene-PHA56_RS29345;Name=PHA56_RS29345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29345;old_locus_tag=PHA56_29345 NZ_CP116215.1 Protein Homology CDS 232874 233929 . + 0 ID=cds-WP_271292989.1;Parent=gene-PHA56_RS29345;Dbxref=Genbank:WP_271292989.1;Name=WP_271292989.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014599032.1;locus_tag=PHA56_RS29345;product=IS481-like element ISKpn28 family transposase;protein_id=WP_271292989.1;transl_table=11 NZ_CP116215.1 RefSeq gene 234282 236492 . - . ID=gene-PHA56_RS29350;Name=PHA56_RS29350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29350;old_locus_tag=PHA56_29350 NZ_CP116215.1 Protein Homology CDS 234282 236492 . - 0 ID=cds-WP_271292990.1;Parent=gene-PHA56_RS29350;Dbxref=Genbank:WP_271292990.1;Name=WP_271292990.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012540226.1;locus_tag=PHA56_RS29350;product=AAA family ATPase;protein_id=WP_271292990.1;transl_table=11 NZ_CP116215.1 RefSeq gene 237287 237991 . + . ID=gene-PHA56_RS29355;Name=PHA56_RS29355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29355;old_locus_tag=PHA56_29355 NZ_CP116215.1 Protein Homology CDS 237287 237991 . + 0 ID=cds-WP_059331711.1-3;Parent=gene-PHA56_RS29355;Dbxref=Genbank:WP_059331711.1;Name=WP_059331711.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221000.1;locus_tag=PHA56_RS29355;product=IS6-like element IS26 family transposase;protein_id=WP_059331711.1;transl_table=11 NZ_CP116215.1 RefSeq gene 238105 238926 . + . ID=gene-PHA56_RS29360;Name=PHA56_RS29360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29360;old_locus_tag=PHA56_29360 NZ_CP116215.1 Protein Homology CDS 238105 238926 . + 0 ID=cds-WP_019706045.1;Parent=gene-PHA56_RS29360;Dbxref=Genbank:WP_019706045.1;Name=WP_019706045.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000744355.1;locus_tag=PHA56_RS29360;product=TrbG/VirB9 family P-type conjugative transfer protein;protein_id=WP_019706045.1;transl_table=11 NZ_CP116215.1 RefSeq gene 238926 240086 . + . ID=gene-PHA56_RS29365;Name=virB10;gbkey=Gene;gene=virB10;gene_biotype=protein_coding;locus_tag=PHA56_RS29365;old_locus_tag=PHA56_29365 NZ_CP116215.1 Protein Homology CDS 238926 240086 . + 0 ID=cds-WP_012561145.1;Parent=gene-PHA56_RS29365;Dbxref=Genbank:WP_012561145.1;Name=WP_012561145.1;gbkey=CDS;gene=virB10;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220995.1;locus_tag=PHA56_RS29365;product=type IV secretion system protein VirB10;protein_id=WP_012561145.1;transl_table=11 NZ_CP116215.1 RefSeq gene 240128 241123 . + . ID=gene-PHA56_RS29370;Name=PHA56_RS29370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29370;old_locus_tag=PHA56_29370 NZ_CP116215.1 Protein Homology CDS 240128 241123 . + 0 ID=cds-WP_012561144.1;Parent=gene-PHA56_RS29370;Dbxref=Genbank:WP_012561144.1;Name=WP_012561144.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220996.1;locus_tag=PHA56_RS29370;product=ATPase%2C T2SS/T4P/T4SS family;protein_id=WP_012561144.1;transl_table=11 NZ_CP116215.1 RefSeq gene 241123 241656 . + . ID=gene-PHA56_RS29375;Name=PHA56_RS29375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29375;old_locus_tag=PHA56_29375 NZ_CP116215.1 Protein Homology CDS 241123 241656 . + 0 ID=cds-WP_057066695.1;Parent=gene-PHA56_RS29375;Dbxref=Genbank:WP_057066695.1;Name=WP_057066695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220997.1;locus_tag=PHA56_RS29375;product=phospholipase D family protein;protein_id=WP_057066695.1;transl_table=11 NZ_CP116215.1 RefSeq gene 241829 242143 . - . ID=gene-PHA56_RS29380;Name=PHA56_RS29380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29380;old_locus_tag=PHA56_29380 NZ_CP116215.1 Protein Homology CDS 241829 242143 . - 0 ID=cds-WP_000091613.1;Parent=gene-PHA56_RS29380;Dbxref=Genbank:WP_000091613.1;Name=WP_000091613.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000091613.1;locus_tag=PHA56_RS29380;product=hypothetical protein;protein_id=WP_000091613.1;transl_table=11 NZ_CP116215.1 RefSeq gene 242398 242754 . - . ID=gene-PHA56_RS29385;Name=PHA56_RS29385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29385;old_locus_tag=PHA56_29385 NZ_CP116215.1 Protein Homology CDS 242398 242754 . - 0 ID=cds-WP_000215515.1;Parent=gene-PHA56_RS29385;Dbxref=Genbank:WP_000215515.1;Name=WP_000215515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003465043.1;locus_tag=PHA56_RS29385;product=cupin domain-containing protein;protein_id=WP_000215515.1;transl_table=11 NZ_CP116215.1 RefSeq gene 242744 243145 . - . ID=gene-PHA56_RS29390;Name=PHA56_RS29390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29390;old_locus_tag=PHA56_29390 NZ_CP116215.1 Protein Homology CDS 242744 243145 . - 0 ID=cds-WP_001293886.1;Parent=gene-PHA56_RS29390;Dbxref=Genbank:WP_001293886.1;Name=WP_001293886.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001293886.1;locus_tag=PHA56_RS29390;product=DUF86 domain-containing protein;protein_id=WP_001293886.1;transl_table=11 NZ_CP116215.1 RefSeq gene 243142 243432 . - . ID=gene-PHA56_RS29395;Name=PHA56_RS29395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29395;old_locus_tag=PHA56_29395 NZ_CP116215.1 Protein Homology CDS 243142 243432 . - 0 ID=cds-WP_001247892.1;Parent=gene-PHA56_RS29395;Dbxref=Genbank:WP_001247892.1;Name=WP_001247892.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001247892.1;locus_tag=PHA56_RS29395;product=nucleotidyltransferase;protein_id=WP_001247892.1;transl_table=11 NZ_CP116215.1 RefSeq pseudogene 243591 245090 . + . ID=gene-PHA56_RS29400;Name=PHA56_RS29400;end_range=245090,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS29400;old_locus_tag=PHA56_29400;partial=true;pseudo=true NZ_CP116215.1 Protein Homology CDS 243591 245090 . + 0 ID=cds-PHA56_RS29400;Parent=gene-PHA56_RS29400;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=245090,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014834018.1;locus_tag=PHA56_RS29400;partial=true;product=Tn3-like element ISPa38 family transposase;pseudo=true;transl_table=11 NZ_CP116215.1 RefSeq gene 245367 246371 . - . ID=gene-PHA56_RS29405;Name=PHA56_RS29405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29405;old_locus_tag=PHA56_29405 NZ_CP116215.1 Protein Homology CDS 245367 246371 . - 0 ID=cds-WP_000427623.1-4;Parent=gene-PHA56_RS29405;Dbxref=Genbank:WP_000427623.1;Name=WP_000427623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229637.1;locus_tag=PHA56_RS29405;product=IS110-like element IS4321 family transposase;protein_id=WP_000427623.1;transl_table=11 NZ_CP116215.1 RefSeq gene 246450 246884 . - . ID=gene-PHA56_RS29410;Name=PHA56_RS29410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29410;old_locus_tag=PHA56_29410 NZ_CP116215.1 Protein Homology CDS 246450 246884 . - 0 ID=cds-WP_003131969.1;Parent=gene-PHA56_RS29410;Dbxref=Genbank:WP_003131969.1;Name=WP_003131969.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229638.1;locus_tag=PHA56_RS29410;product=mercury resistance transcriptional regulator MerR;protein_id=WP_003131969.1;transl_table=11 NZ_CP116215.1 RefSeq gene 246956 247306 . + . ID=gene-PHA56_RS29415;Name=merT;gbkey=Gene;gene=merT;gene_biotype=protein_coding;locus_tag=PHA56_RS29415;old_locus_tag=PHA56_29415 NZ_CP116215.1 Protein Homology CDS 246956 247306 . + 0 ID=cds-WP_003131974.1;Parent=gene-PHA56_RS29415;Dbxref=Genbank:WP_003131974.1;Name=WP_003131974.1;gbkey=CDS;gene=merT;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229639.1;locus_tag=PHA56_RS29415;product=mercuric ion transporter MerT;protein_id=WP_003131974.1;transl_table=11 NZ_CP116215.1 RefSeq gene 247319 247594 . + . ID=gene-PHA56_RS29420;Name=merP;gbkey=Gene;gene=merP;gene_biotype=protein_coding;locus_tag=PHA56_RS29420;old_locus_tag=PHA56_29420 NZ_CP116215.1 Protein Homology CDS 247319 247594 . + 0 ID=cds-WP_003131987.1;Parent=gene-PHA56_RS29420;Dbxref=Genbank:WP_003131987.1;Name=WP_003131987.1;Ontology_term=GO:0045340;gbkey=CDS;gene=merP;go_function=mercury ion binding|0045340||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229640.1;locus_tag=PHA56_RS29420;product=mercury resistance system periplasmic binding protein MerP;protein_id=WP_003131987.1;transl_table=11 NZ_CP116215.1 RefSeq gene 247666 249351 . + . ID=gene-PHA56_RS29425;Name=merA;gbkey=Gene;gene=merA;gene_biotype=protein_coding;locus_tag=PHA56_RS29425;old_locus_tag=PHA56_29425 NZ_CP116215.1 Protein Homology CDS 247666 249351 . + 0 ID=cds-WP_003156770.1;Parent=gene-PHA56_RS29425;Dbxref=Genbank:WP_003156770.1;Name=WP_003156770.1;Ontology_term=GO:0016152;gbkey=CDS;gene=merA;go_function=mercury (II) reductase activity|0016152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013722692.1;locus_tag=PHA56_RS29425;product=mercury(II) reductase;protein_id=WP_003156770.1;transl_table=11 NZ_CP116215.1 RefSeq gene 249369 249734 . + . ID=gene-PHA56_RS29430;Name=merD;gbkey=Gene;gene=merD;gene_biotype=protein_coding;locus_tag=PHA56_RS29430;old_locus_tag=PHA56_29430 NZ_CP116215.1 Protein Homology CDS 249369 249734 . + 0 ID=cds-WP_000995360.1;Parent=gene-PHA56_RS29430;Dbxref=Genbank:WP_000995360.1;Name=WP_000995360.1;Ontology_term=GO:0006355,GO:0045892,GO:0003677;gbkey=CDS;gene=merD;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001277466.1;locus_tag=PHA56_RS29430;product=mercury resistance co-regulator MerD;protein_id=WP_000995360.1;transl_table=11 NZ_CP116215.1 RefSeq gene 249731 249967 . + . ID=gene-PHA56_RS29435;Name=merE;gbkey=Gene;gene=merE;gene_biotype=protein_coding;locus_tag=PHA56_RS29435;old_locus_tag=PHA56_29435 NZ_CP116215.1 Protein Homology CDS 249731 249967 . + 0 ID=cds-WP_003132004.1;Parent=gene-PHA56_RS29435;Dbxref=Genbank:WP_003132004.1;Name=WP_003132004.1;gbkey=CDS;gene=merE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003132004.1;locus_tag=PHA56_RS29435;product=broad-spectrum mercury transporter MerE;protein_id=WP_003132004.1;transl_table=11 NZ_CP116215.1 RefSeq gene 250003 250779 . + . ID=gene-PHA56_RS29440;Name=PHA56_RS29440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29440;old_locus_tag=PHA56_29440 NZ_CP116215.1 Protein Homology CDS 250003 250779 . + 0 ID=cds-WP_271293007.1;Parent=gene-PHA56_RS29440;Dbxref=Genbank:WP_271293007.1;Name=WP_271293007.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003158918.1;locus_tag=PHA56_RS29440;product=cyclic diguanylate phosphodiesterase;protein_id=WP_271293007.1;transl_table=11 NZ_CP116215.1 RefSeq gene 250725 251429 . - . ID=gene-PHA56_RS29445;Name=PHA56_RS29445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29445;old_locus_tag=PHA56_29445 NZ_CP116215.1 Protein Homology CDS 250725 251429 . - 0 ID=cds-WP_001067855.1-2;Parent=gene-PHA56_RS29445;Dbxref=Genbank:WP_001067855.1;Name=WP_001067855.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221000.1;locus_tag=PHA56_RS29445;product=IS6-like element IS26 family transposase;protein_id=WP_001067855.1;transl_table=11 NZ_CP116215.1 RefSeq gene 251420 252040 . + . ID=gene-PHA56_RS29450;Name=PHA56_RS29450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29450;old_locus_tag=PHA56_29450 NZ_CP116215.1 GeneMarkS-2+ CDS 251420 252040 . + 0 ID=cds-WP_057068510.1;Parent=gene-PHA56_RS29450;Dbxref=Genbank:WP_057068510.1;Name=WP_057068510.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PHA56_RS29450;product=hypothetical protein;protein_id=WP_057068510.1;transl_table=11 NZ_CP116215.1 RefSeq gene 252037 252327 . + . ID=gene-PHA56_RS29455;Name=PHA56_RS29455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29455;old_locus_tag=PHA56_29455 NZ_CP116215.1 Protein Homology CDS 252037 252327 . + 0 ID=cds-WP_007372364.1;Parent=gene-PHA56_RS29455;Dbxref=Genbank:WP_007372364.1;Name=WP_007372364.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000990619.1;locus_tag=PHA56_RS29455;product=hypothetical protein;protein_id=WP_007372364.1;transl_table=11 NZ_CP116215.1 RefSeq gene 252859 253239 . - . ID=gene-PHA56_RS29460;Name=PHA56_RS29460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29460;old_locus_tag=PHA56_29460 NZ_CP116215.1 GeneMarkS-2+ CDS 252859 253239 . - 0 ID=cds-WP_007372363.1;Parent=gene-PHA56_RS29460;Dbxref=Genbank:WP_007372363.1;Name=WP_007372363.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PHA56_RS29460;product=hypothetical protein;protein_id=WP_007372363.1;transl_table=11 NZ_CP116215.1 RefSeq gene 254219 255628 . + . ID=gene-PHA56_RS29465;Name=PHA56_RS29465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29465;old_locus_tag=PHA56_29465 NZ_CP116215.1 Protein Homology CDS 254219 255628 . + 0 ID=cds-WP_007372362.1;Parent=gene-PHA56_RS29465;Dbxref=Genbank:WP_007372362.1;Name=WP_007372362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015672912.1;locus_tag=PHA56_RS29465;product=cytochrome ubiquinol oxidase subunit I;protein_id=WP_007372362.1;transl_table=11 NZ_CP116215.1 RefSeq gene 255628 256638 . + . ID=gene-PHA56_RS29470;Name=cydB;gbkey=Gene;gene=cydB;gene_biotype=protein_coding;locus_tag=PHA56_RS29470;old_locus_tag=PHA56_29470 NZ_CP116215.1 Protein Homology CDS 255628 256638 . + 0 ID=cds-WP_007372361.1;Parent=gene-PHA56_RS29470;Dbxref=Genbank:WP_007372361.1;Name=WP_007372361.1;Ontology_term=GO:0016682;gbkey=CDS;gene=cydB;go_function=oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006327184.1;locus_tag=PHA56_RS29470;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_007372361.1;transl_table=11 NZ_CP116215.1 RefSeq gene 256664 256810 . + . ID=gene-PHA56_RS29475;Name=PHA56_RS29475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29475;old_locus_tag=PHA56_29475 NZ_CP116215.1 Protein Homology CDS 256664 256810 . + 0 ID=cds-WP_000859348.1;Parent=gene-PHA56_RS29475;Dbxref=Genbank:WP_000859348.1;Name=WP_000859348.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000859348.1;locus_tag=PHA56_RS29475;product=DUF2474 domain-containing protein;protein_id=WP_000859348.1;transl_table=11 NZ_CP116215.1 RefSeq gene 256971 258122 . - . ID=gene-PHA56_RS29480;Name=PHA56_RS29480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29480;old_locus_tag=PHA56_29480 NZ_CP116215.1 Protein Homology CDS 256971 258122 . - 0 ID=cds-WP_007372360.1;Parent=gene-PHA56_RS29480;Dbxref=Genbank:WP_007372360.1;Name=WP_007372360.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008988739.1;locus_tag=PHA56_RS29480;product=iron-containing alcohol dehydrogenase;protein_id=WP_007372360.1;transl_table=11 NZ_CP116215.1 RefSeq gene 258808 259083 . - . ID=gene-PHA56_RS29485;Name=frmR;gbkey=Gene;gene=frmR;gene_biotype=protein_coding;locus_tag=PHA56_RS29485;old_locus_tag=PHA56_29485 NZ_CP116215.1 Protein Homology CDS 258808 259083 . - 0 ID=cds-WP_001141269.1;Parent=gene-PHA56_RS29485;Dbxref=Genbank:WP_001141269.1;Name=WP_001141269.1;gbkey=CDS;gene=frmR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414891.4;locus_tag=PHA56_RS29485;product=formaldehyde-responsive transcriptional repressor FrmR;protein_id=WP_001141269.1;transl_table=11 NZ_CP116215.1 RefSeq gene 259448 259879 . - . ID=gene-PHA56_RS29490;Name=PHA56_RS29490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29490;old_locus_tag=PHA56_29490 NZ_CP116215.1 Protein Homology CDS 259448 259879 . - 0 ID=cds-WP_000765646.1;Parent=gene-PHA56_RS29490;Dbxref=Genbank:WP_000765646.1;Name=WP_000765646.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000765646.1;locus_tag=PHA56_RS29490;product=DUF488 domain-containing protein;protein_id=WP_000765646.1;transl_table=11 NZ_CP116215.1 RefSeq gene 260071 262722 . - . ID=gene-PHA56_RS29495;Name=PHA56_RS29495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29495;old_locus_tag=PHA56_29495 NZ_CP116215.1 Protein Homology CDS 260071 262722 . - 0 ID=cds-WP_000038427.1;Parent=gene-PHA56_RS29495;Dbxref=Genbank:WP_000038427.1;Name=WP_000038427.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000038427.1;locus_tag=PHA56_RS29495;product=excinuclease ABC subunit UvrA;protein_id=WP_000038427.1;transl_table=11 NZ_CP116215.1 RefSeq gene 262926 264236 . - . ID=gene-PHA56_RS29500;Name=PHA56_RS29500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29500;old_locus_tag=PHA56_29500 NZ_CP116215.1 Protein Homology CDS 262926 264236 . - 0 ID=cds-WP_000233327.1;Parent=gene-PHA56_RS29500;Dbxref=Genbank:WP_000233327.1;Name=WP_000233327.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000233327.1;locus_tag=PHA56_RS29500;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_000233327.1;transl_table=11 NZ_CP116215.1 RefSeq gene 264254 265084 . - . ID=gene-PHA56_RS29505;Name=fghA;gbkey=Gene;gene=fghA;gene_biotype=protein_coding;locus_tag=PHA56_RS29505;old_locus_tag=PHA56_29505 NZ_CP116215.1 Protein Homology CDS 264254 265084 . - 0 ID=cds-WP_042630903.1;Parent=gene-PHA56_RS29505;Dbxref=Genbank:WP_042630903.1;Name=WP_042630903.1;Ontology_term=GO:0046292,GO:0018738;gbkey=CDS;gene=fghA;go_function=S-formylglutathione hydrolase activity|0018738||IEA;go_process=formaldehyde metabolic process|0046292||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000439570.1;locus_tag=PHA56_RS29505;product=S-formylglutathione hydrolase;protein_id=WP_042630903.1;transl_table=11 NZ_CP116215.1 RefSeq gene 265132 266466 . - . ID=gene-PHA56_RS29510;Name=PHA56_RS29510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29510;old_locus_tag=PHA56_29510 NZ_CP116215.1 Protein Homology CDS 265132 266466 . - 0 ID=cds-WP_042630902.1;Parent=gene-PHA56_RS29510;Dbxref=Genbank:WP_042630902.1;Name=WP_042630902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000664785.1;locus_tag=PHA56_RS29510;product=DUF3422 family protein;protein_id=WP_042630902.1;transl_table=11 NZ_CP116215.1 RefSeq gene 266624 267022 . - . ID=gene-PHA56_RS29515;Name=PHA56_RS29515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29515;old_locus_tag=PHA56_29515 NZ_CP116215.1 Protein Homology CDS 266624 267022 . - 0 ID=cds-WP_000070400.1;Parent=gene-PHA56_RS29515;Dbxref=Genbank:WP_000070400.1;Name=WP_000070400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009639360.1;locus_tag=PHA56_RS29515;product=VOC family protein;protein_id=WP_000070400.1;transl_table=11 NZ_CP116215.1 RefSeq gene 267073 268182 . - . ID=gene-PHA56_RS29520;Name=PHA56_RS29520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29520;old_locus_tag=PHA56_29520 NZ_CP116215.1 Protein Homology CDS 267073 268182 . - 0 ID=cds-WP_000842119.1;Parent=gene-PHA56_RS29520;Dbxref=Genbank:WP_000842119.1;Name=WP_000842119.1;Ontology_term=GO:0006113,GO:0009404,GO:0004024,GO:0051903;gbkey=CDS;go_function=alcohol dehydrogenase activity%2C zinc-dependent|0004024||IEA,S-(hydroxymethyl)glutathione dehydrogenase activity|0051903||IEA;go_process=fermentation|0006113||IEA,toxin metabolic process|0009404||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308438.1;locus_tag=PHA56_RS29520;product=S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase;protein_id=WP_000842119.1;transl_table=11 NZ_CP116215.1 RefSeq gene 268241 268516 . - . ID=gene-PHA56_RS29525;Name=frmR;gbkey=Gene;gene=frmR;gene_biotype=protein_coding;locus_tag=PHA56_RS29525;old_locus_tag=PHA56_29525 NZ_CP116215.1 Protein Homology CDS 268241 268516 . - 0 ID=cds-WP_001120775.1;Parent=gene-PHA56_RS29525;Dbxref=Genbank:WP_001120775.1;Name=WP_001120775.1;gbkey=CDS;gene=frmR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007182548.1;locus_tag=PHA56_RS29525;product=formaldehyde-responsive transcriptional repressor FrmR;protein_id=WP_001120775.1;transl_table=11 NZ_CP116215.1 RefSeq gene 268803 270779 . + . ID=gene-PHA56_RS29530;Name=uvrB;gbkey=Gene;gene=uvrB;gene_biotype=protein_coding;locus_tag=PHA56_RS29530;old_locus_tag=PHA56_29530 NZ_CP116215.1 Protein Homology CDS 268803 270779 . + 0 ID=cds-WP_050886231.1;Parent=gene-PHA56_RS29530;Dbxref=Genbank:WP_050886231.1;Name=WP_050886231.1;Ontology_term=GO:0006289,GO:0003677,GO:0005515,GO:0005524,GO:0016787,GO:0016887,GO:0009380;gbkey=CDS;gene=uvrB;go_component=excinuclease repair complex|0009380||IEA;go_function=DNA binding|0003677||IEA,protein binding|0005515||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001120095.1;locus_tag=PHA56_RS29530;product=excinuclease ABC subunit UvrB;protein_id=WP_050886231.1;transl_table=11 NZ_CP116215.1 RefSeq gene 271062 271328 . - . ID=gene-PHA56_RS29535;Name=PHA56_RS29535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29535;old_locus_tag=PHA56_29535 NZ_CP116215.1 Protein Homology CDS 271062 271328 . - 0 ID=cds-WP_000699996.1;Parent=gene-PHA56_RS29535;Dbxref=Genbank:WP_000699996.1;Name=WP_000699996.1;Ontology_term=GO:0044780,GO:0045893;gbkey=CDS;go_process=bacterial-type flagellum assembly|0044780||IEA,positive regulation of DNA-templated transcription|0045893||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009653367.1;locus_tag=PHA56_RS29535;product=flagellar transcriptional regulator FlhD;protein_id=WP_000699996.1;transl_table=11 NZ_CP116215.1 RefSeq gene 271377 272090 . - . ID=gene-PHA56_RS29540;Name=PHA56_RS29540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29540;old_locus_tag=PHA56_29540 NZ_CP116215.1 Protein Homology CDS 271377 272090 . - 0 ID=cds-WP_050886232.1;Parent=gene-PHA56_RS29540;Dbxref=Genbank:WP_050886232.1;Name=WP_050886232.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000139428.1;locus_tag=PHA56_RS29540;product=GNAT family protein;protein_id=WP_050886232.1;transl_table=11 NZ_CP116215.1 RefSeq pseudogene 272773 273170 . - . ID=gene-PHA56_RS29545;Name=PHA56_RS29545;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS29545;old_locus_tag=PHA56_29545;pseudo=true NZ_CP116215.1 Protein Homology CDS 272773 273170 . - 0 ID=cds-PHA56_RS29545;Parent=gene-PHA56_RS29545;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007755460.1;locus_tag=PHA56_RS29545;product=type II toxin-antitoxin system VapC family toxin;pseudo=true;transl_table=11 NZ_CP116215.1 RefSeq gene 273167 273388 . - . ID=gene-PHA56_RS29550;Name=vapB;gbkey=Gene;gene=vapB;gene_biotype=protein_coding;locus_tag=PHA56_RS29550;old_locus_tag=PHA56_29550 NZ_CP116215.1 Protein Homology CDS 273167 273388 . - 0 ID=cds-WP_050886233.1;Parent=gene-PHA56_RS29550;Dbxref=Genbank:WP_050886233.1;Name=WP_050886233.1;gbkey=CDS;gene=vapB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229629.1;locus_tag=PHA56_RS29550;product=type II toxin-antitoxin system VapB family antitoxin;protein_id=WP_050886233.1;transl_table=11 NZ_CP116215.1 RefSeq gene 273470 274300 . + . ID=gene-PHA56_RS29555;Name=PHA56_RS29555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29555;old_locus_tag=PHA56_29555 NZ_CP116215.1 Protein Homology CDS 273470 274300 . + 0 ID=cds-WP_050886234.1;Parent=gene-PHA56_RS29555;Dbxref=Genbank:WP_050886234.1;Name=WP_050886234.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012539937.1;locus_tag=PHA56_RS29555;product=hypothetical protein;protein_id=WP_050886234.1;transl_table=11 NZ_CP116215.1 RefSeq gene 274452 277139 . + . ID=gene-PHA56_RS29560;Name=PHA56_RS29560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29560;old_locus_tag=PHA56_29560 NZ_CP116215.1 Protein Homology CDS 274452 277139 . + 0 ID=cds-WP_087761875.1;Parent=gene-PHA56_RS29560;Dbxref=Genbank:WP_087761875.1;Name=WP_087761875.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000215804.1;locus_tag=PHA56_RS29560;product=hypothetical protein;protein_id=WP_087761875.1;transl_table=11 NZ_CP116215.1 RefSeq gene 277300 279129 . - . ID=gene-PHA56_RS29565;Name=PHA56_RS29565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29565;old_locus_tag=PHA56_29565 NZ_CP116215.1 Protein Homology CDS 277300 279129 . - 0 ID=cds-WP_106672647.1;Parent=gene-PHA56_RS29565;Dbxref=Genbank:WP_106672647.1;Name=WP_106672647.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001217270.1;locus_tag=PHA56_RS29565;product=hypothetical protein;protein_id=WP_106672647.1;transl_table=11 NZ_CP116215.1 RefSeq gene 279650 279979 . - . ID=gene-PHA56_RS29570;Name=PHA56_RS29570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29570;old_locus_tag=PHA56_29570 NZ_CP116215.1 GeneMarkS-2+ CDS 279650 279979 . - 0 ID=cds-WP_022646501.1;Parent=gene-PHA56_RS29570;Dbxref=Genbank:WP_022646501.1;Name=WP_022646501.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PHA56_RS29570;product=hypothetical protein;protein_id=WP_022646501.1;transl_table=11 NZ_CP116215.1 RefSeq gene 280919 281044 . + . ID=gene-PHA56_RS29575;Name=PHA56_RS29575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29575;old_locus_tag=PHA56_29575 NZ_CP116215.1 GeneMarkS-2+ CDS 280919 281044 . + 0 ID=cds-WP_271292991.1;Parent=gene-PHA56_RS29575;Dbxref=Genbank:WP_271292991.1;Name=WP_271292991.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PHA56_RS29575;product=hypothetical protein;protein_id=WP_271292991.1;transl_table=11 NZ_CP116215.1 RefSeq gene 281223 282191 . - . ID=gene-PHA56_RS29580;Name=PHA56_RS29580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29580;old_locus_tag=PHA56_29580 NZ_CP116215.1 Protein Homology CDS 281223 282191 . - 0 ID=cds-WP_072206253.1;Parent=gene-PHA56_RS29580;Dbxref=Genbank:WP_072206253.1;Name=WP_072206253.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1;locus_tag=PHA56_RS29580;product=IS5 family transposase;protein_id=WP_072206253.1;transl_table=11 NZ_CP116215.1 RefSeq gene 282193 282870 . - . ID=gene-PHA56_RS29585;Name=PHA56_RS29585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29585;old_locus_tag=PHA56_29585 NZ_CP116215.1 Protein Homology CDS 282193 282870 . - 0 ID=cds-WP_271292992.1;Parent=gene-PHA56_RS29585;Dbxref=Genbank:WP_271292992.1;Name=WP_271292992.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000182008.1;locus_tag=PHA56_RS29585;product=hypothetical protein;protein_id=WP_271292992.1;transl_table=11 NZ_CP116215.1 RefSeq gene 283335 284099 . + . ID=gene-PHA56_RS29590;Name=PHA56_RS29590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29590;old_locus_tag=PHA56_29590 NZ_CP116215.1 Protein Homology CDS 283335 284099 . + 0 ID=cds-WP_000174662.1;Parent=gene-PHA56_RS29590;Dbxref=Genbank:WP_000174662.1;Name=WP_000174662.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000174662.1;locus_tag=PHA56_RS29590;product=tyrosine-type recombinase/integrase;protein_id=WP_000174662.1;transl_table=11 NZ_CP116215.1 RefSeq gene 284119 285213 . + . ID=gene-PHA56_RS29595;Name=PHA56_RS29595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29595;old_locus_tag=PHA56_29595 NZ_CP116215.1 Protein Homology CDS 284119 285213 . + 0 ID=cds-WP_007372351.1;Parent=gene-PHA56_RS29595;Dbxref=Genbank:WP_007372351.1;Name=WP_007372351.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007372351.1;locus_tag=PHA56_RS29595;product=hypothetical protein;protein_id=WP_007372351.1;transl_table=11 NZ_CP116215.1 RefSeq gene 285347 286246 . + . ID=gene-PHA56_RS29600;Name=PHA56_RS29600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29600;old_locus_tag=PHA56_29600 NZ_CP116215.1 Protein Homology CDS 285347 286246 . + 0 ID=cds-WP_071532009.1;Parent=gene-PHA56_RS29600;Dbxref=Genbank:WP_071532009.1;Name=WP_071532009.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF037432.2;locus_tag=PHA56_RS29600;product=HEPN/Toprim-associated domain-containing protein;protein_id=WP_071532009.1;transl_table=11 NZ_CP116215.1 RefSeq gene 286137 286841 . - . ID=gene-PHA56_RS29605;Name=PHA56_RS29605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29605;old_locus_tag=PHA56_29605 NZ_CP116215.1 Protein Homology CDS 286137 286841 . - 0 ID=cds-WP_001067855.1-3;Parent=gene-PHA56_RS29605;Dbxref=Genbank:WP_001067855.1;Name=WP_001067855.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221000.1;locus_tag=PHA56_RS29605;product=IS6-like element IS26 family transposase;protein_id=WP_001067855.1;transl_table=11 NZ_CP116215.1 RefSeq pseudogene 286906 287028 . - . ID=gene-PHA56_RS29610;Name=PHA56_RS29610;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS29610;old_locus_tag=PHA56_29610;partial=true;pseudo=true;start_range=.,286906 NZ_CP116215.1 Protein Homology CDS 286906 287028 . - 0 ID=cds-PHA56_RS29610;Parent=gene-PHA56_RS29610;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000019445.1;locus_tag=PHA56_RS29610;partial=true;product=IS5/IS1182 family transposase;pseudo=true;start_range=.,286906;transl_table=11 NZ_CP116215.1 RefSeq pseudogene 287096 287308 . + . ID=gene-PHA56_RS29615;Name=PHA56_RS29615;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS29615;old_locus_tag=PHA56_29615;partial=true;pseudo=true;start_range=.,287096 NZ_CP116215.1 Protein Homology CDS 287096 287308 . + 0 ID=cds-PHA56_RS29615;Parent=gene-PHA56_RS29615;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013578380.1;locus_tag=PHA56_RS29615;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;start_range=.,287096;transl_table=11 NZ_CP116215.1 RefSeq gene 287428 287718 . + . ID=gene-PHA56_RS29620;Name=PHA56_RS29620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29620;old_locus_tag=PHA56_29620 NZ_CP116215.1 Protein Homology CDS 287428 287718 . + 0 ID=cds-WP_016241603.1;Parent=gene-PHA56_RS29620;Dbxref=Genbank:WP_016241603.1;Name=WP_016241603.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017459230.1;locus_tag=PHA56_RS29620;product=antibiotic biosynthesis monooxygenase;protein_id=WP_016241603.1;transl_table=11 NZ_CP116215.1 RefSeq gene 287891 288871 . + . ID=gene-PHA56_RS29625;Name=PHA56_RS29625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29625;old_locus_tag=PHA56_29625 NZ_CP116215.1 Protein Homology CDS 287891 288871 . + 0 ID=cds-WP_000019441.1;Parent=gene-PHA56_RS29625;Dbxref=Genbank:WP_000019441.1;Name=WP_000019441.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000019445.1;locus_tag=PHA56_RS29625;product=IS5-like element ISKpn26 family transposase;protein_id=WP_000019441.1;transl_table=11 NZ_CP116215.1 RefSeq pseudogene 289009 289212 . + . ID=gene-PHA56_RS29630;Name=PHA56_RS29630;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS29630;old_locus_tag=PHA56_29630;partial=true;pseudo=true;start_range=.,289009 NZ_CP116215.1 Protein Homology CDS 289009 289212 . + 0 ID=cds-PHA56_RS29630;Parent=gene-PHA56_RS29630;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014599159.1;locus_tag=PHA56_RS29630;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,289009;transl_table=11 NZ_CP116215.1 RefSeq gene 289229 290392 . + . ID=gene-PHA56_RS29635;Name=dhaT;gbkey=Gene;gene=dhaT;gene_biotype=protein_coding;locus_tag=PHA56_RS29635;old_locus_tag=PHA56_29635 NZ_CP116215.1 Protein Homology CDS 289229 290392 . + 0 ID=cds-WP_023336801.1;Parent=gene-PHA56_RS29635;Dbxref=Genbank:WP_023336801.1;Name=WP_023336801.1;gbkey=CDS;gene=dhaT;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228921.1;locus_tag=PHA56_RS29635;product=1%2C3-propanediol dehydrogenase;protein_id=WP_023336801.1;transl_table=11 NZ_CP116215.1 RefSeq pseudogene 290413 290601 . + . ID=gene-PHA56_RS29640;Name=PHA56_RS29640;end_range=290601,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS29640;old_locus_tag=PHA56_29640;partial=true;pseudo=true NZ_CP116215.1 Protein Homology CDS 290413 290601 . + 0 ID=cds-PHA56_RS29640;Parent=gene-PHA56_RS29640;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=290601,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228922.1;locus_tag=PHA56_RS29640;partial=true;product=glycerol dehydratase reactivase beta/small subunit family protein;pseudo=true;transl_table=11 NZ_CP116215.1 RefSeq gene 290664 291368 . + . ID=gene-PHA56_RS29645;Name=PHA56_RS29645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29645;old_locus_tag=PHA56_29645 NZ_CP116215.1 Protein Homology CDS 290664 291368 . + 0 ID=cds-WP_001067855.1-4;Parent=gene-PHA56_RS29645;Dbxref=Genbank:WP_001067855.1;Name=WP_001067855.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221000.1;locus_tag=PHA56_RS29645;product=IS6-like element IS26 family transposase;protein_id=WP_001067855.1;transl_table=11 NZ_CP116215.1 RefSeq pseudogene 291423 292112 . + . ID=gene-PHA56_RS29650;Name=PHA56_RS29650;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS29650;old_locus_tag=PHA56_29650;partial=true;pseudo=true;start_range=.,291423 NZ_CP116215.1 Protein Homology CDS 291423 292112 . + 0 ID=cds-PHA56_RS29650;Parent=gene-PHA56_RS29650;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004186929.1;locus_tag=PHA56_RS29650;partial=true;product=Tn3 family transposase;pseudo=true;start_range=.,291423;transl_table=11 NZ_CP116215.1 RefSeq gene 292109 293131 . + . ID=gene-PHA56_RS29655;Name=PHA56_RS29655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29655;old_locus_tag=PHA56_29655 NZ_CP116215.1 Protein Homology CDS 292109 293131 . + 0 ID=cds-WP_000156887.1-4;Parent=gene-PHA56_RS29655;Dbxref=Genbank:WP_000156887.1;Name=WP_000156887.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612074.1;locus_tag=PHA56_RS29655;product=IS110 family transposase;protein_id=WP_000156887.1;transl_table=11 NZ_CP116215.1 RefSeq gene 293518 294585 . - . ID=gene-PHA56_RS29660;Name=PHA56_RS29660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29660;old_locus_tag=PHA56_29660 NZ_CP116215.1 Protein Homology CDS 293518 294585 . - 0 ID=cds-WP_040238711.1;Parent=gene-PHA56_RS29660;Dbxref=Genbank:WP_040238711.1;Name=WP_040238711.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004186930.1;locus_tag=PHA56_RS29660;product=hypothetical protein;protein_id=WP_040238711.1;transl_table=11 NZ_CP116215.1 RefSeq gene 294671 294925 . - . ID=gene-PHA56_RS29665;Name=PHA56_RS29665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29665;old_locus_tag=PHA56_29665 NZ_CP116215.1 Protein Homology CDS 294671 294925 . - 0 ID=cds-WP_004197576.1;Parent=gene-PHA56_RS29665;Dbxref=Genbank:WP_004197576.1;Name=WP_004197576.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004186931.1;locus_tag=PHA56_RS29665;product=Hha/YmoA family nucleoid-associated regulatory protein;protein_id=WP_004197576.1;transl_table=11 NZ_CP116215.1 RefSeq gene 295102 296238 . + . ID=gene-PHA56_RS29670;Name=PHA56_RS29670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29670;old_locus_tag=PHA56_29670 NZ_CP116215.1 Protein Homology CDS 295102 296238 . + 0 ID=cds-WP_040238712.1;Parent=gene-PHA56_RS29670;Dbxref=Genbank:WP_040238712.1;Name=WP_040238712.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004117850.1;locus_tag=PHA56_RS29670;product=tyrosine-type recombinase/integrase;protein_id=WP_040238712.1;transl_table=11 NZ_CP116215.1 RefSeq gene 296304 296621 . - . ID=gene-PHA56_RS29675;Name=PHA56_RS29675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29675;old_locus_tag=PHA56_29675 NZ_CP116215.1 Protein Homology CDS 296304 296621 . - 0 ID=cds-WP_004213829.1;Parent=gene-PHA56_RS29675;Dbxref=Genbank:WP_004213829.1;Name=WP_004213829.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004026552.1;locus_tag=PHA56_RS29675;product=hypothetical protein;protein_id=WP_004213829.1;transl_table=11 NZ_CP116215.1 RefSeq gene 296772 297095 . - . ID=gene-PHA56_RS29680;Name=PHA56_RS29680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29680;old_locus_tag=PHA56_29680 NZ_CP116215.1 Protein Homology CDS 296772 297095 . - 0 ID=cds-WP_004197568.1;Parent=gene-PHA56_RS29680;Dbxref=Genbank:WP_004197568.1;Name=WP_004197568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004117846.1;locus_tag=PHA56_RS29680;product=hypothetical protein;protein_id=WP_004197568.1;transl_table=11 NZ_CP116215.1 RefSeq gene 297092 297850 . - . ID=gene-PHA56_RS29685;Name=PHA56_RS29685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29685;old_locus_tag=PHA56_29685 NZ_CP116215.1 Protein Homology CDS 297092 297850 . - 0 ID=cds-WP_004181760.1;Parent=gene-PHA56_RS29685;Dbxref=Genbank:WP_004181760.1;Name=WP_004181760.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004026550.1;locus_tag=PHA56_RS29685;product=hypothetical protein;protein_id=WP_004181760.1;transl_table=11 NZ_CP116215.1 RefSeq gene 297847 298806 . - . ID=gene-PHA56_RS29690;Name=PHA56_RS29690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29690;old_locus_tag=PHA56_29690 NZ_CP116215.1 Protein Homology CDS 297847 298806 . - 0 ID=cds-WP_004026549.1;Parent=gene-PHA56_RS29690;Dbxref=Genbank:WP_004026549.1;Name=WP_004026549.1;Ontology_term=GO:0006274,GO:0003677,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA;go_process=DNA replication termination|0006274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011251302.1;locus_tag=PHA56_RS29690;product=DNA replication terminus site-binding protein;protein_id=WP_004026549.1;transl_table=11 NZ_CP116215.1 RefSeq gene 298849 299256 . - . ID=gene-PHA56_RS29695;Name=PHA56_RS29695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29695;old_locus_tag=PHA56_29695 NZ_CP116215.1 Protein Homology CDS 298849 299256 . - 0 ID=cds-WP_004186937.1;Parent=gene-PHA56_RS29695;Dbxref=Genbank:WP_004186937.1;Name=WP_004186937.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004181761.1;locus_tag=PHA56_RS29695;product=hypothetical protein;protein_id=WP_004186937.1;transl_table=11 NZ_CP116215.1 RefSeq gene 299266 299730 . - . ID=gene-PHA56_RS29700;Name=PHA56_RS29700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29700;old_locus_tag=PHA56_29700 NZ_CP116215.1 Protein Homology CDS 299266 299730 . - 0 ID=cds-WP_004181762.1;Parent=gene-PHA56_RS29700;Dbxref=Genbank:WP_004181762.1;Name=WP_004181762.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004117834.1;locus_tag=PHA56_RS29700;product=hypothetical protein;protein_id=WP_004181762.1;transl_table=11 NZ_CP116215.1 RefSeq gene 299778 300020 . - . ID=gene-PHA56_RS29705;Name=PHA56_RS29705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29705;old_locus_tag=PHA56_29705 NZ_CP116215.1 Protein Homology CDS 299778 300020 . - 0 ID=cds-WP_049130050.1;Parent=gene-PHA56_RS29705;Dbxref=Genbank:WP_049130050.1;Name=WP_049130050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012540189.1;locus_tag=PHA56_RS29705;product=hypothetical protein;protein_id=WP_049130050.1;transl_table=11 NZ_CP116215.1 RefSeq gene 300007 300615 . - . ID=gene-PHA56_RS29710;Name=PHA56_RS29710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29710;old_locus_tag=PHA56_29710 NZ_CP116215.1 Protein Homology CDS 300007 300615 . - 0 ID=cds-WP_049130051.1;Parent=gene-PHA56_RS29710;Dbxref=Genbank:WP_049130051.1;Name=WP_049130051.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004026546.1;locus_tag=PHA56_RS29710;product=hypothetical protein;protein_id=WP_049130051.1;transl_table=11 NZ_CP116215.1 RefSeq gene 300608 300829 . - . ID=gene-PHA56_RS29715;Name=PHA56_RS29715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29715;old_locus_tag=PHA56_29715 NZ_CP116215.1 Protein Homology CDS 300608 300829 . - 0 ID=cds-WP_223175070.1;Parent=gene-PHA56_RS29715;Dbxref=Genbank:WP_223175070.1;Name=WP_223175070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004181765.1;locus_tag=PHA56_RS29715;product=hypothetical protein;protein_id=WP_223175070.1;transl_table=11 NZ_CP116215.1 RefSeq gene 300971 301510 . - . ID=gene-PHA56_RS29720;Name=PHA56_RS29720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29720;old_locus_tag=PHA56_29720 NZ_CP116215.1 Protein Homology CDS 300971 301510 . - 0 ID=cds-WP_271292993.1;Parent=gene-PHA56_RS29720;Dbxref=Genbank:WP_271292993.1;Name=WP_271292993.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004181766.1;locus_tag=PHA56_RS29720;product=hypothetical protein;protein_id=WP_271292993.1;transl_table=11 NZ_CP116215.1 RefSeq gene 301579 302823 . - . ID=gene-PHA56_RS29725;Name=PHA56_RS29725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29725;old_locus_tag=PHA56_29725 NZ_CP116215.1 Protein Homology CDS 301579 302823 . - 0 ID=cds-WP_049130052.1;Parent=gene-PHA56_RS29725;Dbxref=Genbank:WP_049130052.1;Name=WP_049130052.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009652473.1;locus_tag=PHA56_RS29725;product=toprim domain-containing protein;protein_id=WP_049130052.1;transl_table=11 NZ_CP116215.1 RefSeq gene 302934 303164 . - . ID=gene-PHA56_RS29730;Name=PHA56_RS29730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29730;old_locus_tag=PHA56_29730 NZ_CP116215.1 Protein Homology CDS 302934 303164 . - 0 ID=cds-WP_004181768.1;Parent=gene-PHA56_RS29730;Dbxref=Genbank:WP_004181768.1;Name=WP_004181768.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004181768.1;locus_tag=PHA56_RS29730;product=hypothetical protein;protein_id=WP_004181768.1;transl_table=11 NZ_CP116215.1 RefSeq gene 303236 305281 . - . ID=gene-PHA56_RS29735;Name=PHA56_RS29735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29735;old_locus_tag=PHA56_29735 NZ_CP116215.1 Protein Homology CDS 303236 305281 . - 0 ID=cds-WP_271292994.1;Parent=gene-PHA56_RS29735;Dbxref=Genbank:WP_271292994.1;Name=WP_271292994.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004026539.1;locus_tag=PHA56_RS29735;product=VWA domain-containing protein;protein_id=WP_271292994.1;transl_table=11 NZ_CP116215.1 RefSeq gene 305345 306421 . - . ID=gene-PHA56_RS29740;Name=PHA56_RS29740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29740;old_locus_tag=PHA56_29740 NZ_CP116215.1 Protein Homology CDS 305345 306421 . - 0 ID=cds-WP_004026538.1;Parent=gene-PHA56_RS29740;Dbxref=Genbank:WP_004026538.1;Name=WP_004026538.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004026538.1;locus_tag=PHA56_RS29740;product=DUF3150 domain-containing protein;protein_id=WP_004026538.1;transl_table=11 NZ_CP116215.1 RefSeq gene 306515 307567 . - . ID=gene-PHA56_RS29745;Name=PHA56_RS29745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29745;old_locus_tag=PHA56_29745 NZ_CP116215.1 Protein Homology CDS 306515 307567 . - 0 ID=cds-WP_004196646.1;Parent=gene-PHA56_RS29745;Dbxref=Genbank:WP_004196646.1;Name=WP_004196646.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004181771.1;locus_tag=PHA56_RS29745;product=AAA family ATPase;protein_id=WP_004196646.1;transl_table=11 NZ_CP116215.1 RefSeq gene 307595 308431 . - . ID=gene-PHA56_RS29750;Name=PHA56_RS29750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29750;old_locus_tag=PHA56_29750 NZ_CP116215.1 Protein Homology CDS 307595 308431 . - 0 ID=cds-WP_223686625.1;Parent=gene-PHA56_RS29750;Dbxref=Genbank:WP_223686625.1;Name=WP_223686625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014839941.1;locus_tag=PHA56_RS29750;product=hypothetical protein;protein_id=WP_223686625.1;transl_table=11 NZ_CP116215.1 RefSeq gene 308478 308831 . - . ID=gene-PHA56_RS29755;Name=PHA56_RS29755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29755;old_locus_tag=PHA56_29755 NZ_CP116215.1 Protein Homology CDS 308478 308831 . - 0 ID=cds-WP_004181774.1;Parent=gene-PHA56_RS29755;Dbxref=Genbank:WP_004181774.1;Name=WP_004181774.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004181774.1;locus_tag=PHA56_RS29755;product=hypothetical protein;protein_id=WP_004181774.1;transl_table=11 NZ_CP116215.1 RefSeq gene 308978 309958 . - . ID=gene-PHA56_RS29760;Name=PHA56_RS29760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29760;old_locus_tag=PHA56_29760 NZ_CP116215.1 Protein Homology CDS 308978 309958 . - 0 ID=cds-WP_029505580.1;Parent=gene-PHA56_RS29760;Dbxref=Genbank:WP_029505580.1;Name=WP_029505580.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004026531.1;locus_tag=PHA56_RS29760;product=hypothetical protein;protein_id=WP_029505580.1;transl_table=11 NZ_CP116215.1 RefSeq gene 310291 312090 . - . ID=gene-PHA56_RS29765;Name=PHA56_RS29765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29765;old_locus_tag=PHA56_29765 NZ_CP116215.1 Protein Homology CDS 310291 312090 . - 0 ID=cds-WP_004196639.1;Parent=gene-PHA56_RS29765;Dbxref=Genbank:WP_004196639.1;Name=WP_004196639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004181776.1;locus_tag=PHA56_RS29765;product=ATP-dependent helicase;protein_id=WP_004196639.1;transl_table=11 NZ_CP116215.1 RefSeq gene 312371 313222 . + . ID=gene-PHA56_RS29770;Name=PHA56_RS29770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29770;old_locus_tag=PHA56_29770 NZ_CP116215.1 Protein Homology CDS 312371 313222 . + 0 ID=cds-WP_004186952.1;Parent=gene-PHA56_RS29770;Dbxref=Genbank:WP_004186952.1;Name=WP_004186952.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004026527.1;locus_tag=PHA56_RS29770;product=hypothetical protein;protein_id=WP_004186952.1;transl_table=11 NZ_CP116215.1 RefSeq gene 313252 316434 . - . ID=gene-PHA56_RS29775;Name=traN;gbkey=Gene;gene=traN;gene_biotype=protein_coding;locus_tag=PHA56_RS29775;old_locus_tag=PHA56_29775 NZ_CP116215.1 Protein Homology CDS 313252 316434 . - 0 ID=cds-WP_042932492.1;Parent=gene-PHA56_RS29775;Dbxref=Genbank:WP_042932492.1;Name=WP_042932492.1;gbkey=CDS;gene=traN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004186954.1;locus_tag=PHA56_RS29775;product=conjugal transfer protein TraN;protein_id=WP_042932492.1;transl_table=11 NZ_CP116215.1 RefSeq gene 316444 317481 . - . ID=gene-PHA56_RS29780;Name=trhU;gbkey=Gene;gene=trhU;gene_biotype=protein_coding;locus_tag=PHA56_RS29780;old_locus_tag=PHA56_29780 NZ_CP116215.1 Protein Homology CDS 316444 317481 . - 0 ID=cds-WP_004026524.1;Parent=gene-PHA56_RS29780;Dbxref=Genbank:WP_004026524.1;Name=WP_004026524.1;gbkey=CDS;gene=trhU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004026524.1;locus_tag=PHA56_RS29780;product=IncHI-type conjugal transfer protein TrhU;protein_id=WP_004026524.1;transl_table=11 NZ_CP116215.1 RefSeq gene 317478 318839 . - . ID=gene-PHA56_RS29785;Name=PHA56_RS29785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29785;old_locus_tag=PHA56_29785 NZ_CP116215.1 Protein Homology CDS 317478 318839 . - 0 ID=cds-WP_045291109.1;Parent=gene-PHA56_RS29785;Dbxref=Genbank:WP_045291109.1;Name=WP_045291109.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004026523.1;locus_tag=PHA56_RS29785;product=TrbC family F-type conjugative pilus assembly protein;protein_id=WP_045291109.1;transl_table=11 NZ_CP116215.1 RefSeq gene 318826 319350 . - . ID=gene-PHA56_RS29790;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=PHA56_RS29790;old_locus_tag=PHA56_29790 NZ_CP116215.1 Protein Homology CDS 318826 319350 . - 0 ID=cds-WP_004196665.1;Parent=gene-PHA56_RS29790;Dbxref=Genbank:WP_004196665.1;Name=WP_004196665.1;Ontology_term=GO:0006465,GO:0009306,GO:0004252;gbkey=CDS;gene=lepB;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=signal peptide processing|0006465||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004196665.1;locus_tag=PHA56_RS29790;product=signal peptidase I;protein_id=WP_004196665.1;transl_table=11 NZ_CP116215.1 RefSeq gene 319488 321029 . - . ID=gene-PHA56_RS29795;Name=PHA56_RS29795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29795;old_locus_tag=PHA56_29795 NZ_CP116215.1 GeneMarkS-2+ CDS 319488 321029 . - 0 ID=cds-WP_271292995.1;Parent=gene-PHA56_RS29795;Dbxref=Genbank:WP_271292995.1;Name=WP_271292995.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PHA56_RS29795;product=hypothetical protein;protein_id=WP_271292995.1;transl_table=11 NZ_CP116215.1 RefSeq gene 321196 322316 . + . ID=gene-PHA56_RS29800;Name=PHA56_RS29800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29800;old_locus_tag=PHA56_29800 NZ_CP116215.1 Protein Homology CDS 321196 321454 . + 0 ID=cds-WP_085956072.1-10;Parent=gene-PHA56_RS29800;Dbxref=Genbank:WP_085956072.1;Name=WP_085956072.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611473.1;locus_tag=PHA56_RS29800;product=IS3-like element ISKpn34 family transposase;protein_id=WP_085956072.1;transl_table=11 NZ_CP116215.1 Protein Homology CDS 321454 322316 . + 2 ID=cds-WP_085956072.1-10;Parent=gene-PHA56_RS29800;Dbxref=Genbank:WP_085956072.1;Name=WP_085956072.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611473.1;locus_tag=PHA56_RS29800;product=IS3-like element ISKpn34 family transposase;protein_id=WP_085956072.1;transl_table=11 NZ_CP116215.1 RefSeq pseudogene 322363 323076 . + . ID=gene-PHA56_RS29805;Name=PHA56_RS29805;end_range=323076,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS29805;old_locus_tag=PHA56_29805;partial=true;pseudo=true;start_range=.,322363 NZ_CP116215.1 Protein Homology CDS 322363 323076 . + 0 ID=cds-PHA56_RS29805;Parent=gene-PHA56_RS29805;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=323076,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023666.2;locus_tag=PHA56_RS29805;partial=true;product=Ig-like domain repeat protein;pseudo=true;start_range=.,322363;transl_table=11 NZ_CP116215.1 RefSeq gene 323917 324708 . + . ID=gene-PHA56_RS29810;Name=PHA56_RS29810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29810;old_locus_tag=PHA56_29810 NZ_CP116215.1 Protein Homology CDS 323917 324708 . + 0 ID=cds-WP_074171227.1;Parent=gene-PHA56_RS29810;Dbxref=Genbank:WP_074171227.1;Name=WP_074171227.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025125.2;locus_tag=PHA56_RS29810;product=Ig-like domain-containing protein;protein_id=WP_074171227.1;transl_table=11 NZ_CP116215.1 RefSeq gene 324680 324910 . - . ID=gene-PHA56_RS29815;Name=PHA56_RS29815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29815;old_locus_tag=PHA56_29815 NZ_CP116215.1 GeneMarkS-2+ CDS 324680 324910 . - 0 ID=cds-WP_065310894.1;Parent=gene-PHA56_RS29815;Dbxref=Genbank:WP_065310894.1;Name=WP_065310894.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PHA56_RS29815;product=hypothetical protein;protein_id=WP_065310894.1;transl_table=11 NZ_CP116215.1 RefSeq gene 327588 328835 . + . ID=gene-PHA56_RS29820;Name=PHA56_RS29820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29820;old_locus_tag=PHA56_29820 NZ_CP116215.1 Protein Homology CDS 327588 328835 . + 0 ID=cds-WP_004181813.1;Parent=gene-PHA56_RS29820;Dbxref=Genbank:WP_004181813.1;Name=WP_004181813.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004026482.1;locus_tag=PHA56_RS29820;product=ParA family protein;protein_id=WP_004181813.1;transl_table=11 NZ_CP116215.1 RefSeq gene 328835 329845 . + . ID=gene-PHA56_RS29825;Name=PHA56_RS29825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29825;old_locus_tag=PHA56_29825 NZ_CP116215.1 Protein Homology CDS 328835 329845 . + 0 ID=cds-WP_014386499.1;Parent=gene-PHA56_RS29825;Dbxref=Genbank:WP_014386499.1;Name=WP_014386499.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004181814.1;locus_tag=PHA56_RS29825;product=ParB family protein;protein_id=WP_014386499.1;transl_table=11 NZ_CP116215.1 RefSeq gene 330567 332972 . - . ID=gene-PHA56_RS29830;Name=PHA56_RS29830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29830;old_locus_tag=PHA56_29830 NZ_CP116215.1 Protein Homology CDS 330567 332972 . - 0 ID=cds-WP_014386498.1;Parent=gene-PHA56_RS29830;Dbxref=Genbank:WP_014386498.1;Name=WP_014386498.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004883016.1;locus_tag=PHA56_RS29830;product=Ig-like domain-containing protein;protein_id=WP_014386498.1;transl_table=11 NZ_CP116215.1 RefSeq gene 333111 335516 . - . ID=gene-PHA56_RS29835;Name=PHA56_RS29835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29835;old_locus_tag=PHA56_29835 NZ_CP116215.1 Protein Homology CDS 333111 335516 . - 0 ID=cds-WP_048995636.1;Parent=gene-PHA56_RS29835;Dbxref=Genbank:WP_048995636.1;Name=WP_048995636.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004883018.1;locus_tag=PHA56_RS29835;product=Ig-like domain-containing protein;protein_id=WP_048995636.1;transl_table=11 NZ_CP116215.1 RefSeq gene 335940 336359 . - . ID=gene-PHA56_RS29840;Name=PHA56_RS29840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29840;old_locus_tag=PHA56_29840 NZ_CP116215.1 Protein Homology CDS 335940 336359 . - 0 ID=cds-WP_024198092.1;Parent=gene-PHA56_RS29840;Dbxref=Genbank:WP_024198092.1;Name=WP_024198092.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004883023.1;locus_tag=PHA56_RS29840;product=hypothetical protein;protein_id=WP_024198092.1;transl_table=11 NZ_CP116215.1 RefSeq gene 336911 337264 . + . ID=gene-PHA56_RS29845;Name=PHA56_RS29845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29845;old_locus_tag=PHA56_29845 NZ_CP116215.1 Protein Homology CDS 336911 337264 . + 0 ID=cds-WP_065807390.1;Parent=gene-PHA56_RS29845;Dbxref=Genbank:WP_065807390.1;Name=WP_065807390.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004883026.1;locus_tag=PHA56_RS29845;product=hypothetical protein;protein_id=WP_065807390.1;transl_table=11 NZ_CP116215.1 RefSeq gene 337456 337920 . + . ID=gene-PHA56_RS29850;Name=PHA56_RS29850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29850;old_locus_tag=PHA56_29850 NZ_CP116215.1 Protein Homology CDS 337456 337920 . + 0 ID=cds-WP_065807388.1;Parent=gene-PHA56_RS29850;Dbxref=Genbank:WP_065807388.1;Name=WP_065807388.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004181822.1;locus_tag=PHA56_RS29850;product=hypothetical protein;protein_id=WP_065807388.1;transl_table=11 NZ_CP116215.1 RefSeq gene 338020 338598 . + . ID=gene-PHA56_RS29855;Name=PHA56_RS29855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29855;old_locus_tag=PHA56_29855 NZ_CP116215.1 Protein Homology CDS 338020 338598 . + 0 ID=cds-WP_038992080.1;Parent=gene-PHA56_RS29855;Dbxref=Genbank:WP_038992080.1;Name=WP_038992080.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004181823.1;locus_tag=PHA56_RS29855;product=HNH endonuclease signature motif containing protein;protein_id=WP_038992080.1;transl_table=11 NZ_CP116215.1 RefSeq gene 338589 338903 . - . ID=gene-PHA56_RS29860;Name=PHA56_RS29860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29860;old_locus_tag=PHA56_29860 NZ_CP116215.1 Protein Homology CDS 338589 338903 . - 0 ID=cds-WP_004181824.1;Parent=gene-PHA56_RS29860;Dbxref=Genbank:WP_004181824.1;Name=WP_004181824.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004181824.1;locus_tag=PHA56_RS29860;product=hypothetical protein;protein_id=WP_004181824.1;transl_table=11 NZ_CP116215.1 RefSeq gene 339386 339607 . + . ID=gene-PHA56_RS29865;Name=PHA56_RS29865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29865;old_locus_tag=PHA56_29865 NZ_CP116215.1 GeneMarkS-2+ CDS 339386 339607 . + 0 ID=cds-WP_271292996.1;Parent=gene-PHA56_RS29865;Dbxref=Genbank:WP_271292996.1;Name=WP_271292996.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PHA56_RS29865;product=hypothetical protein;protein_id=WP_271292996.1;transl_table=11 NZ_CP116215.1 RefSeq gene 339623 339982 . - . ID=gene-PHA56_RS29870;Name=PHA56_RS29870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29870;old_locus_tag=PHA56_29870 NZ_CP116215.1 Protein Homology CDS 339623 339982 . - 0 ID=cds-WP_004181826.1;Parent=gene-PHA56_RS29870;Dbxref=Genbank:WP_004181826.1;Name=WP_004181826.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004196726.1;locus_tag=PHA56_RS29870;product=hypothetical protein;protein_id=WP_004181826.1;transl_table=11 NZ_CP116215.1 RefSeq gene 340213 340656 . + . ID=gene-PHA56_RS29875;Name=PHA56_RS29875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29875;old_locus_tag=PHA56_29875 NZ_CP116215.1 Protein Homology CDS 340213 340656 . + 0 ID=cds-WP_004026468.1;Parent=gene-PHA56_RS29875;Dbxref=Genbank:WP_004026468.1;Name=WP_004026468.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009652418.1;locus_tag=PHA56_RS29875;product=hypothetical protein;protein_id=WP_004026468.1;transl_table=11 NZ_CP116215.1 RefSeq gene 340910 341170 . + . ID=gene-PHA56_RS29880;Name=PHA56_RS29880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29880;old_locus_tag=PHA56_29880 NZ_CP116215.1 Protein Homology CDS 340910 341170 . + 0 ID=cds-WP_004026466.1;Parent=gene-PHA56_RS29880;Dbxref=Genbank:WP_004026466.1;Name=WP_004026466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004026466.1;locus_tag=PHA56_RS29880;product=hypothetical protein;protein_id=WP_004026466.1;transl_table=11 NZ_CP116215.1 RefSeq gene 341203 341637 . + . ID=gene-PHA56_RS29885;Name=PHA56_RS29885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29885;old_locus_tag=PHA56_29885 NZ_CP116215.1 Protein Homology CDS 341203 341637 . + 0 ID=cds-WP_004026465.1;Parent=gene-PHA56_RS29885;Dbxref=Genbank:WP_004026465.1;Name=WP_004026465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004196690.1;locus_tag=PHA56_RS29885;product=hypothetical protein;protein_id=WP_004026465.1;transl_table=11 NZ_CP116215.1 RefSeq gene 341634 342377 . + . ID=gene-PHA56_RS29890;Name=dnaC;gbkey=Gene;gene=dnaC;gene_biotype=protein_coding;locus_tag=PHA56_RS29890;old_locus_tag=PHA56_29890 NZ_CP116215.1 Protein Homology CDS 341634 342377 . + 0 ID=cds-WP_004026464.1;Parent=gene-PHA56_RS29890;Dbxref=Genbank:WP_004026464.1;Name=WP_004026464.1;gbkey=CDS;gene=dnaC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004026464.1;locus_tag=PHA56_RS29890;product=DNA replication protein DnaC;protein_id=WP_004026464.1;transl_table=11 NZ_CP116215.1 RefSeq gene 342504 343919 . + . ID=gene-PHA56_RS29895;Name=PHA56_RS29895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29895;old_locus_tag=PHA56_29895 NZ_CP116215.1 Protein Homology CDS 342504 343919 . + 0 ID=cds-WP_038992077.1;Parent=gene-PHA56_RS29895;Dbxref=Genbank:WP_038992077.1;Name=WP_038992077.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004181827.1;locus_tag=PHA56_RS29895;product=DNA cytosine methyltransferase;protein_id=WP_038992077.1;transl_table=11 NZ_CP116215.1 RefSeq gene 344009 345211 . - . ID=gene-PHA56_RS29900;Name=PHA56_RS29900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29900;old_locus_tag=PHA56_29900 NZ_CP116215.1 Protein Homology CDS 344009 345211 . - 0 ID=cds-WP_038992075.1;Parent=gene-PHA56_RS29900;Dbxref=Genbank:WP_038992075.1;Name=WP_038992075.1;Ontology_term=GO:0009307,GO:0003677,GO:0009036;gbkey=CDS;go_function=DNA binding|0003677||IEA,type II site-specific deoxyribonuclease activity|0009036||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009652517.1;locus_tag=PHA56_RS29900;product=type II restriction endonuclease;protein_id=WP_038992075.1;transl_table=11 NZ_CP116215.1 RefSeq gene 345789 346037 . + . ID=gene-PHA56_RS29905;Name=PHA56_RS29905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29905;old_locus_tag=PHA56_29905 NZ_CP116215.1 Protein Homology CDS 345789 346037 . + 0 ID=cds-WP_004181828.1;Parent=gene-PHA56_RS29905;Dbxref=Genbank:WP_004181828.1;Name=WP_004181828.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004181828.1;locus_tag=PHA56_RS29905;product=hypothetical protein;protein_id=WP_004181828.1;transl_table=11 NZ_CP116215.1 RefSeq gene 346065 346382 . + . ID=gene-PHA56_RS29910;Name=PHA56_RS29910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29910;old_locus_tag=PHA56_29910 NZ_CP116215.1 Protein Homology CDS 346065 346382 . + 0 ID=cds-WP_004181829.1;Parent=gene-PHA56_RS29910;Dbxref=Genbank:WP_004181829.1;Name=WP_004181829.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004026459.1;locus_tag=PHA56_RS29910;product=DUF3846 domain-containing protein;protein_id=WP_004181829.1;transl_table=11 NZ_CP116215.1 RefSeq gene 346503 346781 . - . ID=gene-PHA56_RS29915;Name=PHA56_RS29915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29915;old_locus_tag=PHA56_29915 NZ_CP116215.1 GeneMarkS-2+ CDS 346503 346781 . - 0 ID=cds-WP_124036897.1;Parent=gene-PHA56_RS29915;Dbxref=Genbank:WP_124036897.1;Name=WP_124036897.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PHA56_RS29915;product=hypothetical protein;protein_id=WP_124036897.1;transl_table=11 NZ_CP116215.1 RefSeq gene 346825 347118 . - . ID=gene-PHA56_RS29920;Name=PHA56_RS29920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29920;old_locus_tag=PHA56_29920 NZ_CP116215.1 Protein Homology CDS 346825 347118 . - 0 ID=cds-WP_004196694.1;Parent=gene-PHA56_RS29920;Dbxref=Genbank:WP_004196694.1;Name=WP_004196694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004196694.1;locus_tag=PHA56_RS29920;product=hypothetical protein;protein_id=WP_004196694.1;transl_table=11 NZ_CP116215.1 RefSeq gene 347179 347841 . - . ID=gene-PHA56_RS29925;Name=PHA56_RS29925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29925;old_locus_tag=PHA56_29925 NZ_CP116215.1 Protein Homology CDS 347179 347841 . - 0 ID=cds-WP_038992072.1;Parent=gene-PHA56_RS29925;Dbxref=Genbank:WP_038992072.1;Name=WP_038992072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016947056.1;locus_tag=PHA56_RS29925;product=hypothetical protein;protein_id=WP_038992072.1;transl_table=11 NZ_CP116215.1 RefSeq gene 347996 348304 . - . ID=gene-PHA56_RS29930;Name=PHA56_RS29930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29930;old_locus_tag=PHA56_29930 NZ_CP116215.1 Protein Homology CDS 347996 348304 . - 0 ID=cds-WP_004026456.1;Parent=gene-PHA56_RS29930;Dbxref=Genbank:WP_004026456.1;Name=WP_004026456.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004181832.1;locus_tag=PHA56_RS29930;product=hypothetical protein;protein_id=WP_004026456.1;transl_table=11 NZ_CP116215.1 RefSeq gene 348599 349033 . - . ID=gene-PHA56_RS29935;Name=PHA56_RS29935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29935;old_locus_tag=PHA56_29935 NZ_CP116215.1 Protein Homology CDS 348599 349033 . - 0 ID=cds-WP_077255437.1;Parent=gene-PHA56_RS29935;Dbxref=Genbank:WP_077255437.1;Name=WP_077255437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004026454.1;locus_tag=PHA56_RS29935;product=hypothetical protein;protein_id=WP_077255437.1;transl_table=11 NZ_CP116215.1 RefSeq gene 349262 349882 . - . ID=gene-PHA56_RS29940;Name=PHA56_RS29940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29940;old_locus_tag=PHA56_29940 NZ_CP116215.1 Protein Homology CDS 349262 349882 . - 0 ID=cds-WP_016947058.1;Parent=gene-PHA56_RS29940;Dbxref=Genbank:WP_016947058.1;Name=WP_016947058.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016947058.1;locus_tag=PHA56_RS29940;product=hypothetical protein;protein_id=WP_016947058.1;transl_table=11 NZ_CP116215.1 RefSeq gene 350107 351087 . - . ID=gene-PHA56_RS29945;Name=PHA56_RS29945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29945;old_locus_tag=PHA56_29945 NZ_CP116215.1 Protein Homology CDS 350107 351087 . - 0 ID=cds-WP_135726817.1-2;Parent=gene-PHA56_RS29945;Dbxref=Genbank:WP_135726817.1;Name=WP_135726817.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414793.2;locus_tag=PHA56_RS29945;product=IS5-like element ISKpn26 family transposase;protein_id=WP_135726817.1;transl_table=11 NZ_CP116215.1 RefSeq gene 351133 351366 . - . ID=gene-PHA56_RS29950;Name=PHA56_RS29950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29950;old_locus_tag=PHA56_29950 NZ_CP116215.1 Protein Homology CDS 351133 351366 . - 0 ID=cds-WP_271292997.1;Parent=gene-PHA56_RS29950;Dbxref=Genbank:WP_271292997.1;Name=WP_271292997.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004196689.1;locus_tag=PHA56_RS29950;product=hypothetical protein;protein_id=WP_271292997.1;transl_table=11 NZ_CP116215.1 RefSeq gene 351402 351674 . - . ID=gene-PHA56_RS29955;Name=yfaE;gbkey=Gene;gene=yfaE;gene_biotype=protein_coding;locus_tag=PHA56_RS29955;old_locus_tag=PHA56_29955 NZ_CP116215.1 Protein Homology CDS 351402 351674 . - 0 ID=cds-WP_004196718.1;Parent=gene-PHA56_RS29955;Dbxref=Genbank:WP_004196718.1;Name=WP_004196718.1;Ontology_term=GO:0051537;gbkey=CDS;gene=yfaE;go_function=2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004196718.1;locus_tag=PHA56_RS29955;product=class I ribonucleotide reductase maintenance protein YfaE;protein_id=WP_004196718.1;transl_table=11 NZ_CP116215.1 RefSeq gene 351953 352264 . + . ID=gene-PHA56_RS29960;Name=PHA56_RS29960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29960;old_locus_tag=PHA56_29960 NZ_CP116215.1 Protein Homology CDS 351953 352264 . + 0 ID=cds-WP_004181835.1;Parent=gene-PHA56_RS29960;Dbxref=Genbank:WP_004181835.1;Name=WP_004181835.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014839961.1;locus_tag=PHA56_RS29960;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_004181835.1;transl_table=11 NZ_CP116215.1 RefSeq gene 352276 352593 . + . ID=gene-PHA56_RS29965;Name=PHA56_RS29965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29965;old_locus_tag=PHA56_29965 NZ_CP116215.1 Protein Homology CDS 352276 352593 . + 0 ID=cds-WP_032719483.1;Parent=gene-PHA56_RS29965;Dbxref=Genbank:WP_032719483.1;Name=WP_032719483.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004026449.1;locus_tag=PHA56_RS29965;product=hypothetical protein;protein_id=WP_032719483.1;transl_table=11 NZ_CP116215.1 RefSeq gene 352623 353012 . + . ID=gene-PHA56_RS29970;Name=PHA56_RS29970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29970;old_locus_tag=PHA56_29970 NZ_CP116215.1 Protein Homology CDS 352623 353012 . + 0 ID=cds-WP_004883159.1;Parent=gene-PHA56_RS29970;Dbxref=Genbank:WP_004883159.1;Name=WP_004883159.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004181836.1;locus_tag=PHA56_RS29970;product=hypothetical protein;protein_id=WP_004883159.1;transl_table=11 NZ_CP116215.1 RefSeq gene 353143 353895 . + . ID=gene-PHA56_RS29975;Name=PHA56_RS29975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29975;old_locus_tag=PHA56_29975 NZ_CP116215.1 Protein Homology CDS 353143 353895 . + 0 ID=cds-WP_004026447.1;Parent=gene-PHA56_RS29975;Dbxref=Genbank:WP_004026447.1;Name=WP_004026447.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016947061.1;locus_tag=PHA56_RS29975;product=hypothetical protein;protein_id=WP_004026447.1;transl_table=11 NZ_CP116215.1 RefSeq gene 354242 355486 . + . ID=gene-PHA56_RS29980;Name=PHA56_RS29980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29980;old_locus_tag=PHA56_29980 NZ_CP116215.1 Protein Homology CDS 354242 355486 . + 0 ID=cds-WP_094284674.1;Parent=gene-PHA56_RS29980;Dbxref=Genbank:WP_094284674.1;Name=WP_094284674.1;Ontology_term=GO:0006306,GO:0003677,GO:0008170;gbkey=CDS;go_function=DNA binding|0003677||IEA,N-methyltransferase activity|0008170||IEA;go_process=DNA methylation|0006306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004026446.1;locus_tag=PHA56_RS29980;product=site-specific DNA-methyltransferase;protein_id=WP_094284674.1;transl_table=11 NZ_CP116215.1 RefSeq gene 355555 358935 . + . ID=gene-PHA56_RS29985;Name=PHA56_RS29985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29985;old_locus_tag=PHA56_29985 NZ_CP116215.1 Protein Homology CDS 355555 358935 . + 0 ID=cds-WP_004883186.1;Parent=gene-PHA56_RS29985;Dbxref=Genbank:WP_004883186.1;Name=WP_004883186.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014839963.1;locus_tag=PHA56_RS29985;product=hypothetical protein;protein_id=WP_004883186.1;transl_table=11 NZ_CP116215.1 RefSeq gene 358945 359280 . + . ID=gene-PHA56_RS29990;Name=PHA56_RS29990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29990;old_locus_tag=PHA56_29990 NZ_CP116215.1 Protein Homology CDS 358945 359280 . + 0 ID=cds-WP_271292998.1;Parent=gene-PHA56_RS29990;Dbxref=Genbank:WP_271292998.1;Name=WP_271292998.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004026444.1;locus_tag=PHA56_RS29990;product=hypothetical protein;protein_id=WP_271292998.1;transl_table=11 NZ_CP116215.1 RefSeq gene 359298 360266 . + . ID=gene-PHA56_RS29995;Name=PHA56_RS29995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS29995;old_locus_tag=PHA56_29995 NZ_CP116215.1 Protein Homology CDS 359298 360266 . + 0 ID=cds-WP_072206253.1-2;Parent=gene-PHA56_RS29995;Dbxref=Genbank:WP_072206253.1;Name=WP_072206253.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1;locus_tag=PHA56_RS29995;product=IS5 family transposase;protein_id=WP_072206253.1;transl_table=11 NZ_CP116215.1 RefSeq gene 360684 361475 . + . ID=gene-PHA56_RS30000;Name=PHA56_RS30000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS30000;old_locus_tag=PHA56_30000 NZ_CP116215.1 Protein Homology CDS 360684 361475 . + 0 ID=cds-WP_004026443.1;Parent=gene-PHA56_RS30000;Dbxref=Genbank:WP_004026443.1;Name=WP_004026443.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004196715.1;locus_tag=PHA56_RS30000;product=hypothetical protein;protein_id=WP_004026443.1;transl_table=11 ##sequence-region NZ_CP116216.1 1 183276 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1134687 NZ_CP116216.1 RefSeq region 1 183276 . + . ID=NZ_CP116216.1:1..183276;Dbxref=taxon:1134687;Is_circular=true;Name=p2562_2;collection-date=2018;country=China: Hangzhou;gbkey=Src;genome=plasmid;isolation-source=sputum;mol_type=genomic DNA;nat-host=Homo sapiens;plasmid-name=p2562_2;strain=2563 NZ_CP116216.1 RefSeq gene 1 1011 . + . ID=gene-PHA56_RS30005;Name=PHA56_RS30005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS30005;old_locus_tag=PHA56_30005 NZ_CP116216.1 Protein Homology CDS 1 1011 . + 0 ID=cds-WP_032752116.1;Parent=gene-PHA56_RS30005;Dbxref=Genbank:WP_032752116.1;Name=WP_032752116.1;Ontology_term=GO:0006270,GO:0003887;gbkey=CDS;go_function=DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication initiation|0006270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017900946.1;locus_tag=PHA56_RS30005;product=RepB family plasmid replication initiator protein;protein_id=WP_032752116.1;transl_table=11 NZ_CP116216.1 RefSeq gene 1320 2060 . - . ID=gene-PHA56_RS30010;Name=PHA56_RS30010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS30010;old_locus_tag=PHA56_30010 NZ_CP116216.1 Protein Homology CDS 1320 2060 . - 0 ID=cds-WP_032752117.1;Parent=gene-PHA56_RS30010;Dbxref=Genbank:WP_032752117.1;Name=WP_032752117.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001586233.1;locus_tag=PHA56_RS30010;product=site-specific integrase;protein_id=WP_032752117.1;transl_table=11 NZ_CP116216.1 RefSeq gene 2525 4216 . - . ID=gene-PHA56_RS30015;Name=PHA56_RS30015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS30015;old_locus_tag=PHA56_30015 NZ_CP116216.1 Protein Homology CDS 2525 4216 . - 0 ID=cds-WP_047665743.1;Parent=gene-PHA56_RS30015;Dbxref=Genbank:WP_047665743.1;Name=WP_047665743.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015486328.1;locus_tag=PHA56_RS30015;product=AIPR family protein;protein_id=WP_047665743.1;transl_table=11 NZ_CP116216.1 RefSeq gene 4319 5299 . + . ID=gene-PHA56_RS30020;Name=PHA56_RS30020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS30020;old_locus_tag=PHA56_30020 NZ_CP116216.1 Protein Homology CDS 4319 5299 . + 0 ID=cds-WP_000019473.1-4;Parent=gene-PHA56_RS30020;Dbxref=Genbank:WP_000019473.1;Name=WP_000019473.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000019445.1;locus_tag=PHA56_RS30020;product=IS5-like element ISKpn26 family transposase;protein_id=WP_000019473.1;transl_table=11 NZ_CP116216.1 RefSeq pseudogene 5829 6361 . - . ID=gene-PHA56_RS30025;Name=PHA56_RS30025;end_range=6361,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS30025;old_locus_tag=PHA56_30025;partial=true;pseudo=true NZ_CP116216.1 Protein Homology CDS 5829 6361 . - 0 ID=cds-PHA56_RS30025;Parent=gene-PHA56_RS30025;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=6361,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611123.1;locus_tag=PHA56_RS30025;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP116216.1 RefSeq gene 6688 7431 . - . ID=gene-PHA56_RS30030;Name=PHA56_RS30030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS30030;old_locus_tag=PHA56_30030 NZ_CP116216.1 Protein Homology CDS 6688 7431 . - 0 ID=cds-WP_040118423.1;Parent=gene-PHA56_RS30030;Dbxref=Genbank:WP_040118423.1;Name=WP_040118423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000015958.1;locus_tag=PHA56_RS30030;product=site-specific integrase;protein_id=WP_040118423.1;transl_table=11 NZ_CP116216.1 RefSeq gene 7473 7802 . - . ID=gene-PHA56_RS30035;Name=PHA56_RS30035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS30035;old_locus_tag=PHA56_30035 NZ_CP116216.1 GeneMarkS-2+ CDS 7473 7802 . - 0 ID=cds-WP_040118424.1;Parent=gene-PHA56_RS30035;Dbxref=Genbank:WP_040118424.1;Name=WP_040118424.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PHA56_RS30035;product=hypothetical protein;protein_id=WP_040118424.1;transl_table=11 NZ_CP116216.1 RefSeq gene 8111 8779 . - . ID=gene-PHA56_RS30040;Name=PHA56_RS30040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS30040;old_locus_tag=PHA56_30040 NZ_CP116216.1 Protein Homology CDS 8111 8779 . - 0 ID=cds-WP_040118425.1;Parent=gene-PHA56_RS30040;Dbxref=Genbank:WP_040118425.1;Name=WP_040118425.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013811189.1;locus_tag=PHA56_RS30040;product=hypothetical protein;protein_id=WP_040118425.1;transl_table=11 NZ_CP116216.1 RefSeq gene 8868 9140 . - . ID=gene-PHA56_RS30045;Name=PHA56_RS30045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS30045;old_locus_tag=PHA56_30045 NZ_CP116216.1 GeneMarkS-2+ CDS 8868 9140 . - 0 ID=cds-WP_032752086.1;Parent=gene-PHA56_RS30045;Dbxref=Genbank:WP_032752086.1;Name=WP_032752086.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PHA56_RS30045;product=hypothetical protein;protein_id=WP_032752086.1;transl_table=11 NZ_CP116216.1 RefSeq gene 10018 10926 . + . ID=gene-PHA56_RS30050;Name=PHA56_RS30050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS30050;old_locus_tag=PHA56_30050 NZ_CP116216.1 Protein Homology CDS 10018 10926 . + 0 ID=cds-WP_007374408.1;Parent=gene-PHA56_RS30050;Dbxref=Genbank:WP_007374408.1;Name=WP_007374408.1;Ontology_term=GO:0003676,GO:0004519;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,endonuclease activity|0004519||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001568530.1;locus_tag=PHA56_RS30050;product=HNH endonuclease;protein_id=WP_007374408.1;transl_table=11 NZ_CP116216.1 RefSeq gene 11334 11684 . - . ID=gene-PHA56_RS30055;Name=PHA56_RS30055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS30055;old_locus_tag=PHA56_30055 NZ_CP116216.1 Protein Homology CDS 11334 11684 . - 0 ID=cds-WP_032752126.1;Parent=gene-PHA56_RS30055;Dbxref=Genbank:WP_032752126.1;Name=WP_032752126.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000647571.1;locus_tag=PHA56_RS30055;product=DUF305 domain-containing protein;protein_id=WP_032752126.1;transl_table=11 NZ_CP116216.1 RefSeq gene 11830 12261 . - . ID=gene-PHA56_RS30060;Name=silE;gbkey=Gene;gene=silE;gene_biotype=protein_coding;locus_tag=PHA56_RS30060;old_locus_tag=PHA56_30060 NZ_CP116216.1 Protein Homology CDS 11830 12261 . - 0 ID=cds-WP_007374411.1;Parent=gene-PHA56_RS30060;Dbxref=Genbank:WP_007374411.1;Name=WP_007374411.1;gbkey=CDS;gene=silE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000790485.1;locus_tag=PHA56_RS30060;product=silver-binding protein SilE;protein_id=WP_007374411.1;transl_table=11 NZ_CP116216.1 RefSeq gene 12507 13982 . - . ID=gene-PHA56_RS30065;Name=silS;gbkey=Gene;gene=silS;gene_biotype=protein_coding;locus_tag=PHA56_RS30065;old_locus_tag=PHA56_30065 NZ_CP116216.1 Protein Homology CDS 12507 13982 . - 0 ID=cds-WP_040118426.1;Parent=gene-PHA56_RS30065;Dbxref=Genbank:WP_040118426.1;Name=WP_040118426.1;gbkey=CDS;gene=silS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004385431.1;locus_tag=PHA56_RS30065;product=copper/silver sensor histidine kinase SilS;protein_id=WP_040118426.1;transl_table=11 NZ_CP116216.1 RefSeq gene 13975 14655 . - . ID=gene-PHA56_RS30070;Name=silR;gbkey=Gene;gene=silR;gene_biotype=protein_coding;locus_tag=PHA56_RS30070;old_locus_tag=PHA56_30070 NZ_CP116216.1 Protein Homology CDS 13975 14655 . - 0 ID=cds-WP_000697968.1;Parent=gene-PHA56_RS30070;Dbxref=Genbank:WP_000697968.1;Name=WP_000697968.1;gbkey=CDS;gene=silR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001572351.1;locus_tag=PHA56_RS30070;product=copper/silver response regulator transcription factor SilR;protein_id=WP_000697968.1;transl_table=11 NZ_CP116216.1 RefSeq gene 14845 16230 . + . ID=gene-PHA56_RS30075;Name=silC;gbkey=Gene;gene=silC;gene_biotype=protein_coding;locus_tag=PHA56_RS30075;old_locus_tag=PHA56_30075 NZ_CP116216.1 Protein Homology CDS 14845 16230 . + 0 ID=cds-WP_000475503.1;Parent=gene-PHA56_RS30075;Dbxref=Genbank:WP_000475503.1;Name=WP_000475503.1;gbkey=CDS;gene=silC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001572989.1;locus_tag=PHA56_RS30075;product=Cu(+)/Ag(+) efflux RND transporter outer membrane channel SilC;protein_id=WP_000475503.1;transl_table=11 NZ_CP116216.1 RefSeq gene 16259 16612 . + . ID=gene-PHA56_RS30080;Name=cusF;gbkey=Gene;gene=cusF;gene_biotype=protein_coding;locus_tag=PHA56_RS30080;old_locus_tag=PHA56_30080 NZ_CP116216.1 Protein Homology CDS 16259 16612 . + 0 ID=cds-WP_001246153.1;Parent=gene-PHA56_RS30080;Dbxref=Genbank:WP_001246153.1;Name=WP_001246153.1;gbkey=CDS;gene=cusF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009654303.1;locus_tag=PHA56_RS30080;product=cation efflux system protein CusF;protein_id=WP_001246153.1;transl_table=11 NZ_CP116216.1 RefSeq gene 16726 18018 . + . ID=gene-PHA56_RS30085;Name=silB;gbkey=Gene;gene=silB;gene_biotype=protein_coding;locus_tag=PHA56_RS30085;old_locus_tag=PHA56_30085 NZ_CP116216.1 Protein Homology CDS 16726 18018 . + 0 ID=cds-WP_023602553.1;Parent=gene-PHA56_RS30085;Dbxref=Genbank:WP_023602553.1;Name=WP_023602553.1;gbkey=CDS;gene=silB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017146627.1;locus_tag=PHA56_RS30085;product=Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit SilB;protein_id=WP_023602553.1;transl_table=11 NZ_CP116216.1 RefSeq gene 18029 21175 . + . ID=gene-PHA56_RS30090;Name=silA;gbkey=Gene;gene=silA;gene_biotype=protein_coding;locus_tag=PHA56_RS30090;old_locus_tag=PHA56_30090 NZ_CP116216.1 Protein Homology CDS 18029 21175 . + 0 ID=cds-WP_000574021.1;Parent=gene-PHA56_RS30090;Dbxref=Genbank:WP_000574021.1;Name=WP_000574021.1;gbkey=CDS;gene=silA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011711636.1;locus_tag=PHA56_RS30090;product=Cu(+)/Ag(+) efflux RND transporter permease subunit SilA;protein_id=WP_000574021.1;transl_table=11 NZ_CP116216.1 RefSeq gene 21262 21702 . + . ID=gene-PHA56_RS30095;Name=PHA56_RS30095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS30095;old_locus_tag=PHA56_30095 NZ_CP116216.1 Protein Homology CDS 21262 21702 . + 0 ID=cds-WP_002436620.1;Parent=gene-PHA56_RS30095;Dbxref=Genbank:WP_002436620.1;Name=WP_002436620.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002436620.1;locus_tag=PHA56_RS30095;product=DUF411 domain-containing protein;protein_id=WP_002436620.1;transl_table=11 NZ_CP116216.1 RefSeq gene 21800 24271 . + . ID=gene-PHA56_RS30100;Name=silP;gbkey=Gene;gene=silP;gene_biotype=protein_coding;locus_tag=PHA56_RS30100;old_locus_tag=PHA56_30100 NZ_CP116216.1 Protein Homology CDS 21800 24271 . + 0 ID=cds-WP_142132150.1;Parent=gene-PHA56_RS30100;Dbxref=Genbank:WP_142132150.1;Name=WP_142132150.1;gbkey=CDS;gene=silP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032489447.1;locus_tag=PHA56_RS30100;product=Ag(+)-translocating P-type ATPase SilP;protein_id=WP_142132150.1;transl_table=11 NZ_CP116216.1 RefSeq gene 24312 24509 . + . ID=gene-PHA56_RS30105;Name=PHA56_RS30105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS30105;old_locus_tag=PHA56_30105 NZ_CP116216.1 Protein Homology CDS 24312 24509 . + 0 ID=cds-WP_000843497.1;Parent=gene-PHA56_RS30105;Dbxref=Genbank:WP_000843497.1;Name=WP_000843497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000843499.1;locus_tag=PHA56_RS30105;product=DUF2933 domain-containing protein;protein_id=WP_000843497.1;transl_table=11 NZ_CP116216.1 RefSeq gene 24543 25280 . - . ID=gene-PHA56_RS30110;Name=PHA56_RS30110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS30110;old_locus_tag=PHA56_30110 NZ_CP116216.1 Protein Homology CDS 24543 25280 . - 0 ID=cds-WP_004118669.1;Parent=gene-PHA56_RS30110;Dbxref=Genbank:WP_004118669.1;Name=WP_004118669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002436617.1;locus_tag=PHA56_RS30110;product=peptidoglycan DD-metalloendopeptidase family protein;protein_id=WP_004118669.1;transl_table=11 NZ_CP116216.1 RefSeq gene 25569 26018 . - . ID=gene-PHA56_RS30115;Name=PHA56_RS30115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS30115;old_locus_tag=PHA56_30115 NZ_CP116216.1 Protein Homology CDS 25569 26018 . - 0 ID=cds-WP_001023257.1;Parent=gene-PHA56_RS30115;Dbxref=Genbank:WP_001023257.1;Name=WP_001023257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004388333.1;locus_tag=PHA56_RS30115;product=copper resistance protein;protein_id=WP_001023257.1;transl_table=11 NZ_CP116216.1 RefSeq gene 26253 28070 . + . ID=gene-PHA56_RS30120;Name=pcoA;gbkey=Gene;gene=pcoA;gene_biotype=protein_coding;locus_tag=PHA56_RS30120;old_locus_tag=PHA56_30120 NZ_CP116216.1 Protein Homology CDS 26253 28070 . + 0 ID=cds-WP_000925242.1;Parent=gene-PHA56_RS30120;Dbxref=Genbank:WP_000925242.1;Name=WP_000925242.1;gbkey=CDS;gene=pcoA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001480786.1;locus_tag=PHA56_RS30120;product=multicopper oxidase PcoA;protein_id=WP_000925242.1;transl_table=11 NZ_CP116216.1 RefSeq gene 28076 28966 . + . ID=gene-PHA56_RS30125;Name=pcoB;gbkey=Gene;gene=pcoB;gene_biotype=protein_coding;locus_tag=PHA56_RS30125;old_locus_tag=PHA56_30125 NZ_CP116216.1 Protein Homology CDS 28076 28966 . + 0 ID=cds-WP_001378118.1;Parent=gene-PHA56_RS30125;Dbxref=Genbank:WP_001378118.1;Name=WP_001378118.1;gbkey=CDS;gene=pcoB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001378118.1;locus_tag=PHA56_RS30125;product=copper resistance outer membrane transporter PcoB;protein_id=WP_001378118.1;transl_table=11 NZ_CP116216.1 RefSeq gene 29006 29386 . + . ID=gene-PHA56_RS30130;Name=pcoC;gbkey=Gene;gene=pcoC;gene_biotype=protein_coding;locus_tag=PHA56_RS30130;old_locus_tag=PHA56_30130 NZ_CP116216.1 Protein Homology CDS 29006 29386 . + 0 ID=cds-WP_000025662.1;Parent=gene-PHA56_RS30130;Dbxref=Genbank:WP_000025662.1;Name=WP_000025662.1;gbkey=CDS;gene=pcoC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004098941.1;locus_tag=PHA56_RS30130;product=copper resistance system metallochaperone PcoC;protein_id=WP_000025662.1;transl_table=11 NZ_CP116216.1 RefSeq gene 29391 30320 . + . ID=gene-PHA56_RS30135;Name=pcoD;gbkey=Gene;gene=pcoD;gene_biotype=protein_coding;locus_tag=PHA56_RS30135;old_locus_tag=PHA56_30135 NZ_CP116216.1 Protein Homology CDS 29391 30320 . + 0 ID=cds-WP_004118344.1;Parent=gene-PHA56_RS30135;Dbxref=Genbank:WP_004118344.1;Name=WP_004118344.1;gbkey=CDS;gene=pcoD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004098940.1;locus_tag=PHA56_RS30135;product=copper resistance inner membrane protein PcoD;protein_id=WP_004118344.1;transl_table=11 NZ_CP116216.1 RefSeq gene 30375 31055 . + . ID=gene-PHA56_RS30140;Name=pcoR;gbkey=Gene;gene=pcoR;gene_biotype=protein_coding;locus_tag=PHA56_RS30140;old_locus_tag=PHA56_30140 NZ_CP116216.1 Protein Homology CDS 30375 31055 . + 0 ID=cds-WP_001188930.1;Parent=gene-PHA56_RS30140;Dbxref=Genbank:WP_001188930.1;Name=WP_001188930.1;gbkey=CDS;gene=pcoR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020239536.1;locus_tag=PHA56_RS30140;product=copper response regulator transcription factor PcoR;protein_id=WP_001188930.1;transl_table=11 NZ_CP116216.1 RefSeq gene 31052 32452 . + . ID=gene-PHA56_RS30145;Name=pcoS;gbkey=Gene;gene=pcoS;gene_biotype=protein_coding;locus_tag=PHA56_RS30145;old_locus_tag=PHA56_30145 NZ_CP116216.1 Protein Homology CDS 31052 32452 . + 0 ID=cds-WP_002436614.1;Parent=gene-PHA56_RS30145;Dbxref=Genbank:WP_002436614.1;Name=WP_002436614.1;gbkey=CDS;gene=pcoS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001211179.1;locus_tag=PHA56_RS30145;product=copper resistance membrane spanning protein PcoS;protein_id=WP_002436614.1;transl_table=11 NZ_CP116216.1 RefSeq gene 32668 33102 . + . ID=gene-PHA56_RS30150;Name=PHA56_RS30150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS30150;old_locus_tag=PHA56_30150 NZ_CP116216.1 Protein Homology CDS 32668 33102 . + 0 ID=cds-WP_004118347.1;Parent=gene-PHA56_RS30150;Dbxref=Genbank:WP_004118347.1;Name=WP_004118347.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000723069.1;locus_tag=PHA56_RS30150;product=hypothetical protein;protein_id=WP_004118347.1;transl_table=11 NZ_CP116216.1 RefSeq pseudogene 33282 33444 . - . ID=gene-PHA56_RS30155;Name=PHA56_RS30155;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS30155;old_locus_tag=PHA56_30155;pseudo=true NZ_CP116216.1 Protein Homology CDS 33282 33444 . - 0 ID=cds-PHA56_RS30155;Parent=gene-PHA56_RS30155;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004152086.1;locus_tag=PHA56_RS30155;product=type II toxin-antitoxin system RelE/ParE family toxin;pseudo=true;transl_table=11 NZ_CP116216.1 RefSeq gene 33481 33579 . - . ID=gene-PHA56_RS30160;Name=PHA56_RS30160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS30160;old_locus_tag=PHA56_30160 NZ_CP116216.1 Protein Homology CDS 33481 33579 . - 0 ID=cds-WP_004118688.1;Parent=gene-PHA56_RS30160;Dbxref=Genbank:WP_004118688.1;Name=WP_004118688.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004118348.1;locus_tag=PHA56_RS30160;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_004118688.1;transl_table=11 NZ_CP116216.1 RefSeq gene 33566 33745 . - . ID=gene-PHA56_RS30165;Name=PHA56_RS30165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS30165;old_locus_tag=PHA56_30165 NZ_CP116216.1 Protein Homology CDS 33566 33745 . - 0 ID=cds-WP_004118349.1;Parent=gene-PHA56_RS30165;Dbxref=Genbank:WP_004118349.1;Name=WP_004118349.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011906492.1;locus_tag=PHA56_RS30165;product=type II toxin-antitoxin system ParD family antitoxin;protein_id=WP_004118349.1;transl_table=11 NZ_CP116216.1 RefSeq gene 34059 34322 . + . ID=gene-PHA56_RS30170;Name=PHA56_RS30170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS30170;old_locus_tag=PHA56_30170 NZ_CP116216.1 Protein Homology CDS 34059 34322 . + 0 ID=cds-WP_009310051.1;Parent=gene-PHA56_RS30170;Dbxref=Genbank:WP_009310051.1;Name=WP_009310051.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009310051.1;locus_tag=PHA56_RS30170;product=hypothetical protein;protein_id=WP_009310051.1;transl_table=11 NZ_CP116216.1 RefSeq gene 34319 34885 . + . ID=gene-PHA56_RS30175;Name=PHA56_RS30175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS30175;old_locus_tag=PHA56_30175 NZ_CP116216.1 Protein Homology CDS 34319 34885 . + 0 ID=cds-WP_009310052.1;Parent=gene-PHA56_RS30175;Dbxref=Genbank:WP_009310052.1;Name=WP_009310052.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004118694.1;locus_tag=PHA56_RS30175;product=hypothetical protein;protein_id=WP_009310052.1;transl_table=11 NZ_CP116216.1 RefSeq gene 34916 35410 . + . ID=gene-PHA56_RS30180;Name=PHA56_RS30180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS30180;old_locus_tag=PHA56_30180 NZ_CP116216.1 Protein Homology CDS 34916 35410 . + 0 ID=cds-WP_004213594.1;Parent=gene-PHA56_RS30180;Dbxref=Genbank:WP_004213594.1;Name=WP_004213594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020805591.1;locus_tag=PHA56_RS30180;product=hypothetical protein;protein_id=WP_004213594.1;transl_table=11 NZ_CP116216.1 RefSeq gene 35471 35674 . + . ID=gene-PHA56_RS30185;Name=PHA56_RS30185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS30185;old_locus_tag=PHA56_30185 NZ_CP116216.1 Protein Homology CDS 35471 35674 . + 0 ID=cds-WP_004150739.1;Parent=gene-PHA56_RS30185;Dbxref=Genbank:WP_004150739.1;Name=WP_004150739.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004152106.1;locus_tag=PHA56_RS30185;product=HHA domain-containing protein;protein_id=WP_004150739.1;transl_table=11 NZ_CP116216.1 RefSeq gene 35768 36936 . + . ID=gene-PHA56_RS30190;Name=PHA56_RS30190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS30190;old_locus_tag=PHA56_30190 NZ_CP116216.1 Protein Homology CDS 35768 36017 . + 0 ID=cds-WP_142132149.1;Parent=gene-PHA56_RS30190;Dbxref=Genbank:WP_142132149.1;Name=WP_142132149.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611553.1;locus_tag=PHA56_RS30190;product=IS3-like element ISEc52 family transposase;protein_id=WP_142132149.1;transl_table=11 NZ_CP116216.1 Protein Homology CDS 36017 36936 . + 2 ID=cds-WP_142132149.1;Parent=gene-PHA56_RS30190;Dbxref=Genbank:WP_142132149.1;Name=WP_142132149.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611553.1;locus_tag=PHA56_RS30190;product=IS3-like element ISEc52 family transposase;protein_id=WP_142132149.1;transl_table=11 NZ_CP116216.1 RefSeq gene 37366 38919 . - . ID=gene-PHA56_RS30195;Name=PHA56_RS30195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS30195;old_locus_tag=PHA56_30195 NZ_CP116216.1 Protein Homology CDS 37366 38919 . - 0 ID=cds-WP_032716625.1;Parent=gene-PHA56_RS30195;Dbxref=Genbank:WP_032716625.1;Name=WP_032716625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134138.1;locus_tag=PHA56_RS30195;product=L-lactate permease;protein_id=WP_032716625.1;transl_table=11 NZ_CP116216.1 RefSeq gene 39355 41052 . + . ID=gene-PHA56_RS30200;Name=dld;gbkey=Gene;gene=dld;gene_biotype=protein_coding;locus_tag=PHA56_RS30200;old_locus_tag=PHA56_30200 NZ_CP116216.1 Protein Homology CDS 39355 41052 . + 0 ID=cds-WP_003033249.1;Parent=gene-PHA56_RS30200;Dbxref=Genbank:WP_003033249.1;Name=WP_003033249.1;Ontology_term=GO:0006089,GO:0019516,GO:0016901;gbkey=CDS;gene=dld;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C quinone or similar compound as acceptor|0016901||IEA;go_process=lactate metabolic process|0006089||IEA,lactate oxidation|0019516||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020324177.1;locus_tag=PHA56_RS30200;product=D-lactate dehydrogenase;protein_id=WP_003033249.1;transl_table=11 NZ_CP116216.1 RefSeq gene 41127 41846 . + . ID=gene-PHA56_RS30205;Name=PHA56_RS30205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS30205;old_locus_tag=PHA56_30205 NZ_CP116216.1 Protein Homology CDS 41127 41846 . + 0 ID=cds-WP_001102107.1;Parent=gene-PHA56_RS30205;Dbxref=Genbank:WP_001102107.1;Name=WP_001102107.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308371.1;locus_tag=PHA56_RS30205;product=(Fe-S)-binding protein;protein_id=WP_001102107.1;transl_table=11 NZ_CP116216.1 RefSeq gene 41857 43284 . + . ID=gene-PHA56_RS30210;Name=PHA56_RS30210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS30210;old_locus_tag=PHA56_30210 NZ_CP116216.1 Protein Homology CDS 41857 43284 . + 0 ID=cds-WP_000023895.1;Parent=gene-PHA56_RS30210;Dbxref=Genbank:WP_000023895.1;Name=WP_000023895.1;Ontology_term=GO:0019516,GO:0009055,GO:0051536;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=lactate oxidation|0019516||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706212.1;locus_tag=PHA56_RS30210;product=LutB/LldF family L-lactate oxidation iron-sulfur protein;protein_id=WP_000023895.1;transl_table=11 NZ_CP116216.1 RefSeq gene 43277 43972 . + . ID=gene-PHA56_RS30215;Name=PHA56_RS30215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS30215;old_locus_tag=PHA56_30215 NZ_CP116216.1 Protein Homology CDS 43277 43972 . + 0 ID=cds-WP_004118595.1;Parent=gene-PHA56_RS30215;Dbxref=Genbank:WP_004118595.1;Name=WP_004118595.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414842.4;locus_tag=PHA56_RS30215;product=lactate utilization protein C;protein_id=WP_004118595.1;transl_table=11 NZ_CP116216.1 RefSeq pseudogene 44022 44402 . - . ID=gene-PHA56_RS30220;Name=PHA56_RS30220;end_range=44402,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS30220;old_locus_tag=PHA56_30220;partial=true;pseudo=true NZ_CP116216.1 Protein Homology CDS 44022 44402 . - 0 ID=cds-PHA56_RS30220;Parent=gene-PHA56_RS30220;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=44402,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313307.1;locus_tag=PHA56_RS30220;partial=true;product=gluconate permease;pseudo=true;transl_table=11 NZ_CP116216.1 RefSeq gene 44613 44924 . + . ID=gene-PHA56_RS30225;Name=PHA56_RS30225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS30225;old_locus_tag=PHA56_30225 NZ_CP116216.1 Protein Homology CDS 44613 44924 . + 0 ID=cds-WP_004118600.1;Parent=gene-PHA56_RS30225;Dbxref=Genbank:WP_004118600.1;Name=WP_004118600.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000558568.1;locus_tag=PHA56_RS30225;product=type II toxin-antitoxin system HigB family toxin;protein_id=WP_004118600.1;transl_table=11 NZ_CP116216.1 RefSeq gene 44921 45340 . + . ID=gene-PHA56_RS30230;Name=PHA56_RS30230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS30230;old_locus_tag=PHA56_30230 NZ_CP116216.1 Protein Homology CDS 44921 45340 . + 0 ID=cds-WP_000990392.1;Parent=gene-PHA56_RS30230;Dbxref=Genbank:WP_000990392.1;Name=WP_000990392.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000990392.1;locus_tag=PHA56_RS30230;product=helix-turn-helix domain-containing protein;protein_id=WP_000990392.1;transl_table=11 NZ_CP116216.1 RefSeq gene 45377 46579 . - . ID=gene-PHA56_RS30235;Name=PHA56_RS30235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS30235;old_locus_tag=PHA56_30235 NZ_CP116216.1 Protein Homology CDS 45377 46579 . - 0 ID=cds-WP_003031541.1;Parent=gene-PHA56_RS30235;Dbxref=Genbank:WP_003031541.1;Name=WP_003031541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000753106.1;locus_tag=PHA56_RS30235;product=hypothetical protein;protein_id=WP_003031541.1;transl_table=11 NZ_CP116216.1 RefSeq gene 46572 46901 . - . ID=gene-PHA56_RS30240;Name=PHA56_RS30240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS30240;old_locus_tag=PHA56_30240 NZ_CP116216.1 Protein Homology CDS 46572 46901 . - 0 ID=cds-WP_004118613.1;Parent=gene-PHA56_RS30240;Dbxref=Genbank:WP_004118613.1;Name=WP_004118613.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000121260.1;locus_tag=PHA56_RS30240;product=hypothetical protein;protein_id=WP_004118613.1;transl_table=11 NZ_CP116216.1 RefSeq gene 46898 47557 . - . ID=gene-PHA56_RS30245;Name=PHA56_RS30245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS30245;old_locus_tag=PHA56_30245 NZ_CP116216.1 Protein Homology CDS 46898 47557 . - 0 ID=cds-WP_000078540.1;Parent=gene-PHA56_RS30245;Dbxref=Genbank:WP_000078540.1;Name=WP_000078540.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000078540.1;locus_tag=PHA56_RS30245;product=hypothetical protein;protein_id=WP_000078540.1;transl_table=11 NZ_CP116216.1 RefSeq gene 47981 48289 . - . ID=gene-PHA56_RS30250;Name=PHA56_RS30250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS30250;old_locus_tag=PHA56_30250 NZ_CP116216.1 Protein Homology CDS 47981 48289 . - 0 ID=cds-WP_020324596.1;Parent=gene-PHA56_RS30250;Dbxref=Genbank:WP_020324596.1;Name=WP_020324596.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020324596.1;locus_tag=PHA56_RS30250;product=Ref family recombination enhancement nuclease;protein_id=WP_020324596.1;transl_table=11 NZ_CP116216.1 RefSeq gene 48457 48597 . - . ID=gene-PHA56_RS30255;Name=PHA56_RS30255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS30255;old_locus_tag=PHA56_30255 NZ_CP116216.1 Protein Homology CDS 48457 48597 . - 0 ID=cds-WP_004118614.1;Parent=gene-PHA56_RS30255;Dbxref=Genbank:WP_004118614.1;Name=WP_004118614.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004118614.1;locus_tag=PHA56_RS30255;product=hypothetical protein;protein_id=WP_004118614.1;transl_table=11 NZ_CP116216.1 RefSeq gene 48890 49243 . + . ID=gene-PHA56_RS30260;Name=arsR;gbkey=Gene;gene=arsR;gene_biotype=protein_coding;locus_tag=PHA56_RS30260;old_locus_tag=PHA56_30260 NZ_CP116216.1 Protein Homology CDS 48890 49243 . + 0 ID=cds-WP_001114073.1;Parent=gene-PHA56_RS30260;Dbxref=Genbank:WP_001114073.1;Name=WP_001114073.1;gbkey=CDS;gene=arsR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001114073.1;locus_tag=PHA56_RS30260;product=As(III)-sensing metalloregulatory transcriptional repressor ArsR;protein_id=WP_001114073.1;transl_table=11 NZ_CP116216.1 RefSeq gene 49291 49653 . + . ID=gene-PHA56_RS30265;Name=arsD;gbkey=Gene;gene=arsD;gene_biotype=protein_coding;locus_tag=PHA56_RS30265;old_locus_tag=PHA56_30265 NZ_CP116216.1 Protein Homology CDS 49291 49653 . + 0 ID=cds-WP_000783215.1;Parent=gene-PHA56_RS30265;Dbxref=Genbank:WP_000783215.1;Name=WP_000783215.1;Ontology_term=GO:0003677;gbkey=CDS;gene=arsD;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000855179.1;locus_tag=PHA56_RS30265;product=arsenite efflux transporter metallochaperone ArsD;protein_id=WP_000783215.1;transl_table=11 NZ_CP116216.1 RefSeq gene 49671 51422 . + . ID=gene-PHA56_RS30270;Name=arsA;gbkey=Gene;gene=arsA;gene_biotype=protein_coding;locus_tag=PHA56_RS30270;old_locus_tag=PHA56_30270 NZ_CP116216.1 Protein Homology CDS 49671 51422 . + 0 ID=cds-WP_040118429.1;Parent=gene-PHA56_RS30270;Dbxref=Genbank:WP_040118429.1;Name=WP_040118429.1;gbkey=CDS;gene=arsA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010999951.1;locus_tag=PHA56_RS30270;product=arsenite efflux transporter ATPase subunit ArsA;protein_id=WP_040118429.1;transl_table=11 NZ_CP116216.1 RefSeq gene 51471 52760 . + . ID=gene-PHA56_RS30275;Name=arsB;gbkey=Gene;gene=arsB;gene_biotype=protein_coding;locus_tag=PHA56_RS30275;old_locus_tag=PHA56_30275 NZ_CP116216.1 Protein Homology CDS 51471 52760 . + 0 ID=cds-WP_000922630.1;Parent=gene-PHA56_RS30275;Dbxref=Genbank:WP_000922630.1;Name=WP_000922630.1;gbkey=CDS;gene=arsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312401.1;locus_tag=PHA56_RS30275;product=arsenite efflux transporter membrane subunit ArsB;protein_id=WP_000922630.1;transl_table=11 NZ_CP116216.1 RefSeq gene 52773 53198 . + . ID=gene-PHA56_RS30280;Name=arsC;gbkey=Gene;gene=arsC;gene_biotype=protein_coding;locus_tag=PHA56_RS30280;old_locus_tag=PHA56_30280 NZ_CP116216.1 Protein Homology CDS 52773 53198 . + 0 ID=cds-WP_000065758.1;Parent=gene-PHA56_RS30280;Dbxref=Genbank:WP_000065758.1;Name=WP_000065758.1;Ontology_term=GO:0008794;gbkey=CDS;gene=arsC;go_function=arsenate reductase (glutaredoxin) activity|0008794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312402.1;locus_tag=PHA56_RS30280;product=glutaredoxin-dependent arsenate reductase;protein_id=WP_000065758.1;transl_table=11 NZ_CP116216.1 RefSeq gene 53229 53495 . - . ID=gene-PHA56_RS30285;Name=PHA56_RS30285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS30285;old_locus_tag=PHA56_30285 NZ_CP116216.1 Protein Homology CDS 53229 53495 . - 0 ID=cds-WP_102047566.1;Parent=gene-PHA56_RS30285;Dbxref=Genbank:WP_102047566.1;Name=WP_102047566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016236909.1;locus_tag=PHA56_RS30285;product=ArsA-related P-loop ATPase;protein_id=WP_102047566.1;transl_table=11 NZ_CP116216.1 RefSeq gene 53569 54273 . + . ID=gene-PHA56_RS30290;Name=PHA56_RS30290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS30290;old_locus_tag=PHA56_30290 NZ_CP116216.1 Protein Homology CDS 53569 54273 . + 0 ID=cds-WP_001067855.1-5;Parent=gene-PHA56_RS30290;Dbxref=Genbank:WP_001067855.1;Name=WP_001067855.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221000.1;locus_tag=PHA56_RS30290;product=IS6-like element IS26 family transposase;protein_id=WP_001067855.1;transl_table=11 NZ_CP116216.1 RefSeq pseudogene 54328 54450 . + . ID=gene-PHA56_RS30295;Name=PHA56_RS30295;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS30295;old_locus_tag=PHA56_30295;partial=true;pseudo=true;start_range=.,54328 NZ_CP116216.1 Protein Homology CDS 54328 54450 . + 0 ID=cds-PHA56_RS30295;Parent=gene-PHA56_RS30295;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015065592.1;locus_tag=PHA56_RS30295;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,54328;transl_table=11 NZ_CP116216.1 RefSeq pseudogene 54472 54699 . + . ID=gene-PHA56_RS30300;Name=PHA56_RS30300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS30300;old_locus_tag=PHA56_30300;partial=true;pseudo=true;start_range=.,54472 NZ_CP116216.1 Protein Homology CDS 54472 54699 . + 0 ID=cds-PHA56_RS30300;Parent=gene-PHA56_RS30300;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012218041.1;locus_tag=PHA56_RS30300;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,54472;transl_table=11 NZ_CP116216.1 RefSeq gene 54858 55340 . - . ID=gene-PHA56_RS30305;Name=PHA56_RS30305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS30305;old_locus_tag=PHA56_30305 NZ_CP116216.1 Protein Homology CDS 54858 55340 . - 0 ID=cds-WP_003026803.1;Parent=gene-PHA56_RS30305;Dbxref=Genbank:WP_003026803.1;Name=WP_003026803.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012540079.1;locus_tag=PHA56_RS30305;product=GNAT family N-acetyltransferase;protein_id=WP_003026803.1;transl_table=11 NZ_CP116216.1 RefSeq gene 55328 55594 . - . ID=gene-PHA56_RS30310;Name=PHA56_RS30310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS30310;old_locus_tag=PHA56_30310 NZ_CP116216.1 Protein Homology CDS 55328 55594 . - 0 ID=cds-WP_003026799.1;Parent=gene-PHA56_RS30310;Dbxref=Genbank:WP_003026799.1;Name=WP_003026799.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004213599.1;locus_tag=PHA56_RS30310;product=DUF1778 domain-containing protein;protein_id=WP_003026799.1;transl_table=11 NZ_CP116216.1 RefSeq gene 55864 56652 . + . ID=gene-PHA56_RS30315;Name=PHA56_RS30315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS30315;old_locus_tag=PHA56_30315 NZ_CP116216.1 Protein Homology CDS 55864 56652 . + 0 ID=cds-WP_077255422.1;Parent=gene-PHA56_RS30315;Dbxref=Genbank:WP_077255422.1;Name=WP_077255422.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003026794.1;locus_tag=PHA56_RS30315;product=hypothetical protein;protein_id=WP_077255422.1;transl_table=11 NZ_CP116216.1 RefSeq gene 56598 57302 . - . ID=gene-PHA56_RS30320;Name=PHA56_RS30320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS30320;old_locus_tag=PHA56_30320 NZ_CP116216.1 Protein Homology CDS 56598 57302 . - 0 ID=cds-WP_001067855.1-6;Parent=gene-PHA56_RS30320;Dbxref=Genbank:WP_001067855.1;Name=WP_001067855.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221000.1;locus_tag=PHA56_RS30320;product=IS6-like element IS26 family transposase;protein_id=WP_001067855.1;transl_table=11 NZ_CP116216.1 RefSeq pseudogene 57366 60151 . + . ID=gene-PHA56_RS30325;Name=PHA56_RS30325;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS30325;old_locus_tag=PHA56_30325;partial=true;pseudo=true;start_range=.,57366 NZ_CP116216.1 Protein Homology CDS 57366 60151 . + 0 ID=cds-PHA56_RS30325;Parent=gene-PHA56_RS30325;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014834018.1;locus_tag=PHA56_RS30325;partial=true;product=Tn3 family transposase;pseudo=true;start_range=.,57366;transl_table=11 NZ_CP116216.1 RefSeq gene 60230 61234 . + . ID=gene-PHA56_RS30330;Name=PHA56_RS30330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS30330;old_locus_tag=PHA56_30330 NZ_CP116216.1 Protein Homology CDS 60230 61234 . + 0 ID=cds-WP_000427623.1-5;Parent=gene-PHA56_RS30330;Dbxref=Genbank:WP_000427623.1;Name=WP_000427623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229637.1;locus_tag=PHA56_RS30330;product=IS110-like element IS4321 family transposase;protein_id=WP_000427623.1;transl_table=11 NZ_CP116216.1 RefSeq gene 61515 62792 . + . ID=gene-PHA56_RS30335;Name=PHA56_RS30335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS30335;old_locus_tag=PHA56_30335 NZ_CP116216.1 Protein Homology CDS 61515 62792 . + 0 ID=cds-WP_064794005.1;Parent=gene-PHA56_RS30335;Dbxref=Genbank:WP_064794005.1;Name=WP_064794005.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005184191.1;locus_tag=PHA56_RS30335;product=arsenic transporter;protein_id=WP_064794005.1;transl_table=11 NZ_CP116216.1 RefSeq gene 62842 63270 . + . ID=gene-PHA56_RS30340;Name=arsC;gbkey=Gene;gene=arsC;gene_biotype=protein_coding;locus_tag=PHA56_RS30340;old_locus_tag=PHA56_30340 NZ_CP116216.1 Protein Homology CDS 62842 63270 . + 0 ID=cds-WP_001549888.1;Parent=gene-PHA56_RS30340;Dbxref=Genbank:WP_001549888.1;Name=WP_001549888.1;Ontology_term=GO:0008794;gbkey=CDS;gene=arsC;go_function=arsenate reductase (glutaredoxin) activity|0008794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014606052.1;locus_tag=PHA56_RS30340;product=glutaredoxin-dependent arsenate reductase;protein_id=WP_001549888.1;transl_table=11 NZ_CP116216.1 RefSeq gene 63328 64041 . - . ID=gene-PHA56_RS30345;Name=arsH;gbkey=Gene;gene=arsH;gene_biotype=protein_coding;locus_tag=PHA56_RS30345;old_locus_tag=PHA56_30345 NZ_CP116216.1 Protein Homology CDS 63328 64041 . - 0 ID=cds-WP_025801347.1;Parent=gene-PHA56_RS30345;Dbxref=Genbank:WP_025801347.1;Name=WP_025801347.1;Ontology_term=GO:0003674;gbkey=CDS;gene=arsH;go_function=molecular_function|0003674||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016151351.1;locus_tag=PHA56_RS30345;product=arsenical resistance protein ArsH;protein_id=WP_025801347.1;transl_table=11 NZ_CP116216.1 RefSeq gene 64047 64379 . - . ID=gene-PHA56_RS30350;Name=PHA56_RS30350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS30350;old_locus_tag=PHA56_30350 NZ_CP116216.1 Protein Homology CDS 64047 64379 . - 0 ID=cds-WP_001549890.1;Parent=gene-PHA56_RS30350;Dbxref=Genbank:WP_001549890.1;Name=WP_001549890.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001549890.1;locus_tag=PHA56_RS30350;product=metalloregulator ArsR/SmtB family transcription factor;protein_id=WP_001549890.1;transl_table=11 NZ_CP116216.1 RefSeq gene 64686 65390 . + . ID=gene-PHA56_RS30355;Name=PHA56_RS30355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS30355;old_locus_tag=PHA56_30355 NZ_CP116216.1 Protein Homology CDS 64686 65390 . + 0 ID=cds-WP_001067855.1-7;Parent=gene-PHA56_RS30355;Dbxref=Genbank:WP_001067855.1;Name=WP_001067855.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221000.1;locus_tag=PHA56_RS30355;product=IS6-like element IS26 family transposase;protein_id=WP_001067855.1;transl_table=11 NZ_CP116216.1 RefSeq pseudogene 65462 65950 . + . ID=gene-PHA56_RS30360;Name=PHA56_RS30360;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS30360;old_locus_tag=PHA56_30360;partial=true;pseudo=true;start_range=.,65462 NZ_CP116216.1 Protein Homology CDS 65462 65950 . + 0 ID=cds-PHA56_RS30360;Parent=gene-PHA56_RS30360;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001028172.1;locus_tag=PHA56_RS30360;partial=true;product=IS110 family transposase;pseudo=true;start_range=.,65462;transl_table=11 NZ_CP116216.1 RefSeq pseudogene 66176 66289 . - . ID=gene-PHA56_RS30365;Name=PHA56_RS30365;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS30365;old_locus_tag=PHA56_30365;partial=true;pseudo=true;start_range=.,66176 NZ_CP116216.1 Protein Homology CDS 66176 66289 . - 0 ID=cds-PHA56_RS30365;Parent=gene-PHA56_RS30365;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611474.1;locus_tag=PHA56_RS30365;partial=true;product=transposase;pseudo=true;start_range=.,66176;transl_table=11 NZ_CP116216.1 RefSeq pseudogene 66311 66994 . + . ID=gene-PHA56_RS30370;Name=PHA56_RS30370;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS30370;old_locus_tag=PHA56_30370;partial=true;pseudo=true;start_range=.,66311 NZ_CP116216.1 Protein Homology CDS 66311 66994 . + 0 ID=cds-PHA56_RS30370;Parent=gene-PHA56_RS30370;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001198018.1;locus_tag=PHA56_RS30370;partial=true;product=cation diffusion facilitator family transporter;pseudo=true;start_range=.,66311;transl_table=11 NZ_CP116216.1 RefSeq gene 67106 67480 . + . ID=gene-PHA56_RS30375;Name=PHA56_RS30375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS30375;old_locus_tag=PHA56_30375 NZ_CP116216.1 Protein Homology CDS 67106 67480 . + 0 ID=cds-WP_011977761.1;Parent=gene-PHA56_RS30375;Dbxref=Genbank:WP_011977761.1;Name=WP_011977761.1;Ontology_term=GO:0022900,GO:0005506,GO:0009055,GO:0020037,GO:0042597;gbkey=CDS;go_component=periplasmic space|0042597||IEA;go_function=iron ion binding|0005506||IEA,electron transfer activity|0009055||IEA,heme binding|0020037||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011977761.1;locus_tag=PHA56_RS30375;product=cytochrome b562;protein_id=WP_011977761.1;transl_table=11 NZ_CP116216.1 RefSeq gene 67918 68499 . + . ID=gene-PHA56_RS30380;Name=PHA56_RS30380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS30380;old_locus_tag=PHA56_30380 NZ_CP116216.1 Protein Homology CDS 67918 68499 . + 0 ID=cds-WP_011977760.1;Parent=gene-PHA56_RS30380;Dbxref=Genbank:WP_011977760.1;Name=WP_011977760.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003846895.1;locus_tag=PHA56_RS30380;product=cytochrome b/b6 domain-containing protein;protein_id=WP_011977760.1;transl_table=11 NZ_CP116216.1 RefSeq gene 68635 69324 . + . ID=gene-PHA56_RS30385;Name=PHA56_RS30385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS30385;old_locus_tag=PHA56_30385 NZ_CP116216.1 Protein Homology CDS 68635 69324 . + 0 ID=cds-WP_016240364.1;Parent=gene-PHA56_RS30385;Dbxref=Genbank:WP_016240364.1;Name=WP_016240364.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008804997.1;locus_tag=PHA56_RS30385;product=VIT family protein;protein_id=WP_016240364.1;transl_table=11 NZ_CP116216.1 RefSeq gene 69467 69778 . - . ID=gene-PHA56_RS30390;Name=PHA56_RS30390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS30390;old_locus_tag=PHA56_30390 NZ_CP116216.1 Protein Homology CDS 69467 69778 . - 0 ID=cds-WP_011977758.1;Parent=gene-PHA56_RS30390;Dbxref=Genbank:WP_011977758.1;Name=WP_011977758.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011977758.1;locus_tag=PHA56_RS30390;product=hypothetical protein;protein_id=WP_011977758.1;transl_table=11 NZ_CP116216.1 RefSeq pseudogene 69951 70115 . + . ID=gene-PHA56_RS30395;Name=PHA56_RS30395;end_range=70115,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS30395;old_locus_tag=PHA56_30395;partial=true;pseudo=true NZ_CP116216.1 Protein Homology CDS 69951 70115 . + 0 ID=cds-PHA56_RS30395;Parent=gene-PHA56_RS30395;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=70115,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612066.1;locus_tag=PHA56_RS30395;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP116216.1 RefSeq gene 70392 71396 . - . ID=gene-PHA56_RS30400;Name=PHA56_RS30400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS30400;old_locus_tag=PHA56_30400 NZ_CP116216.1 Protein Homology CDS 70392 71396 . - 0 ID=cds-WP_000427623.1-6;Parent=gene-PHA56_RS30400;Dbxref=Genbank:WP_000427623.1;Name=WP_000427623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229637.1;locus_tag=PHA56_RS30400;product=IS110-like element IS4321 family transposase;protein_id=WP_000427623.1;transl_table=11 NZ_CP116216.1 RefSeq gene 71800 72810 . - . ID=gene-PHA56_RS30405;Name=PHA56_RS30405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS30405;old_locus_tag=PHA56_30405 NZ_CP116216.1 Protein Homology CDS 71800 72810 . - 0 ID=cds-WP_004152284.1;Parent=gene-PHA56_RS30405;Dbxref=Genbank:WP_004152284.1;Name=WP_004152284.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004152284.1;locus_tag=PHA56_RS30405;product=zinc-binding alcohol dehydrogenase family protein;protein_id=WP_004152284.1;transl_table=11 NZ_CP116216.1 RefSeq pseudogene 73153 73235 . + . ID=gene-PHA56_RS30410;Name=PHA56_RS30410;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS30410;old_locus_tag=PHA56_30410;partial=true;pseudo=true;start_range=.,73153 NZ_CP116216.1 Protein Homology CDS 73153 73235 . + 0 ID=cds-PHA56_RS30410;Parent=gene-PHA56_RS30410;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308426.1;locus_tag=PHA56_RS30410;partial=true;product=hypothetical protein;pseudo=true;start_range=.,73153;transl_table=11 NZ_CP116216.1 RefSeq gene 73271 74353 . + . ID=gene-PHA56_RS30415;Name=lacI;gbkey=Gene;gene=lacI;gene_biotype=protein_coding;locus_tag=PHA56_RS30415;old_locus_tag=PHA56_30415 NZ_CP116216.1 Protein Homology CDS 73271 74353 . + 0 ID=cds-WP_004152286.1;Parent=gene-PHA56_RS30415;Dbxref=Genbank:WP_004152286.1;Name=WP_004152286.1;gbkey=CDS;gene=lacI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414879.3;locus_tag=PHA56_RS30415;product=DNA-binding transcriptional repressor LacI;protein_id=WP_004152286.1;transl_table=11 NZ_CP116216.1 RefSeq gene 74475 77549 . + . ID=gene-PHA56_RS30420;Name=lacZ;gbkey=Gene;gene=lacZ;gene_biotype=protein_coding;locus_tag=PHA56_RS30420;old_locus_tag=PHA56_30420 NZ_CP116216.1 Protein Homology CDS 74475 77549 . + 0 ID=cds-WP_032427316.1;Parent=gene-PHA56_RS30420;Dbxref=Genbank:WP_032427316.1;Name=WP_032427316.1;gbkey=CDS;gene=lacZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414878.1;locus_tag=PHA56_RS30420;product=beta-galactosidase;protein_id=WP_032427316.1;transl_table=11 NZ_CP116216.1 RefSeq gene 77601 78854 . + . ID=gene-PHA56_RS30425;Name=lacY;gbkey=Gene;gene=lacY;gene_biotype=protein_coding;locus_tag=PHA56_RS30425;old_locus_tag=PHA56_30425 NZ_CP116216.1 Protein Homology CDS 77601 78854 . + 0 ID=cds-WP_003846917.1;Parent=gene-PHA56_RS30425;Dbxref=Genbank:WP_003846917.1;Name=WP_003846917.1;gbkey=CDS;gene=lacY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414877.1;locus_tag=PHA56_RS30425;product=lactose permease;protein_id=WP_003846917.1;transl_table=11 NZ_CP116216.1 RefSeq pseudogene 78946 79915 . + . ID=gene-PHA56_RS30430;Name=PHA56_RS30430;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS30430;old_locus_tag=PHA56_30430;pseudo=true NZ_CP116216.1 Protein Homology CDS 78946 79915 . + 0 ID=cds-PHA56_RS30430;Parent=gene-PHA56_RS30430;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1;locus_tag=PHA56_RS30430;product=IS5-like element IS903B family transposase;pseudo=true;transl_table=11 NZ_CP116216.1 RefSeq gene 80560 82869 . + . ID=gene-PHA56_RS30435;Name=PHA56_RS30435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS30435;old_locus_tag=PHA56_30435 NZ_CP116216.1 Protein Homology CDS 80560 82869 . + 0 ID=cds-WP_004152290.1;Parent=gene-PHA56_RS30435;Dbxref=Genbank:WP_004152290.1;Name=WP_004152290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000421673.1;locus_tag=PHA56_RS30435;product=TerB N-terminal domain-containing protein;protein_id=WP_004152290.1;transl_table=11 NZ_CP116216.1 RefSeq gene 82873 84189 . + . ID=gene-PHA56_RS30440;Name=PHA56_RS30440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS30440;old_locus_tag=PHA56_30440 NZ_CP116216.1 Protein Homology CDS 82873 84189 . + 0 ID=cds-WP_004152291.1;Parent=gene-PHA56_RS30440;Dbxref=Genbank:WP_004152291.1;Name=WP_004152291.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000117530.1;locus_tag=PHA56_RS30440;product=ATP-binding protein;protein_id=WP_004152291.1;transl_table=11 NZ_CP116216.1 RefSeq gene 84186 86381 . + . ID=gene-PHA56_RS30445;Name=PHA56_RS30445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS30445;old_locus_tag=PHA56_30445 NZ_CP116216.1 Protein Homology CDS 84186 86381 . + 0 ID=cds-WP_000093087.1;Parent=gene-PHA56_RS30445;Dbxref=Genbank:WP_000093087.1;Name=WP_000093087.1;Ontology_term=GO:0003676,GO:0005524;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000093087.1;locus_tag=PHA56_RS30445;product=DEAD/DEAH box helicase;protein_id=WP_000093087.1;transl_table=11 NZ_CP116216.1 RefSeq gene 87868 88674 . - . ID=gene-PHA56_RS30450;Name=repA;gbkey=Gene;gene=repA;gene_biotype=protein_coding;locus_tag=PHA56_RS30450;old_locus_tag=PHA56_30450 NZ_CP116216.1 Protein Homology CDS 87868 88674 . - 0 ID=cds-WP_044348844.1;Parent=gene-PHA56_RS30450;Dbxref=Genbank:WP_044348844.1;Name=WP_044348844.1;Ontology_term=GO:0006276;gbkey=CDS;gene=repA;go_process=plasmid maintenance|0006276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001697166.1;locus_tag=PHA56_RS30450;product=incFII family plasmid replication initiator RepA;protein_id=WP_044348844.1;transl_table=11 NZ_CP116216.1 RefSeq gene 88733 88804 . - . ID=gene-PHA56_RS30455;Name=tap;gbkey=Gene;gene=tap;gene_biotype=protein_coding;locus_tag=PHA56_RS30455;old_locus_tag=PHA56_30455 NZ_CP116216.1 Protein Homology CDS 88733 88804 . - 0 ID=cds-WP_071887233.1;Parent=gene-PHA56_RS30455;Dbxref=Genbank:WP_071887233.1;Name=WP_071887233.1;Ontology_term=GO:0006276,GO:0003674;gbkey=CDS;gene=tap;go_function=molecular_function|0003674||IEA;go_process=plasmid maintenance|0006276||IEA;inference=COORDINATES: protein motif:HMM:TIGR03475.1;locus_tag=PHA56_RS30455;product=RepA leader peptide Tap;protein_id=WP_071887233.1;transl_table=11 NZ_CP116216.1 RefSeq gene 89020 89289 . - . ID=gene-PHA56_RS30460;Name=repA;gbkey=Gene;gene=repA;gene_biotype=protein_coding;locus_tag=PHA56_RS30460;old_locus_tag=PHA56_30460 NZ_CP116216.1 Protein Homology CDS 89020 89289 . - 0 ID=cds-WP_040118434.1;Parent=gene-PHA56_RS30460;Dbxref=Genbank:WP_040118434.1;Name=WP_040118434.1;gbkey=CDS;gene=repA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016831067.1;locus_tag=PHA56_RS30460;product=replication regulatory protein RepA;protein_id=WP_040118434.1;transl_table=11 NZ_CP116216.1 RefSeq gene 89430 89996 . - . ID=gene-PHA56_RS30465;Name=PHA56_RS30465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS30465;old_locus_tag=PHA56_30465 NZ_CP116216.1 Protein Homology CDS 89430 89996 . - 0 ID=cds-WP_051800686.1;Parent=gene-PHA56_RS30465;Dbxref=Genbank:WP_051800686.1;Name=WP_051800686.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001485404.1;locus_tag=PHA56_RS30465;product=phospholipase D family protein;protein_id=WP_051800686.1;transl_table=11 NZ_CP116216.1 RefSeq pseudogene 90003 90206 . - . ID=gene-PHA56_RS30470;Name=PHA56_RS30470;end_range=90206,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS30470;old_locus_tag=PHA56_30470;partial=true;pseudo=true NZ_CP116216.1 Protein Homology CDS 90003 90206 . - 0 ID=cds-PHA56_RS30470;Parent=gene-PHA56_RS30470;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=90206,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229682.1;locus_tag=PHA56_RS30470;partial=true;product=DUF2726 domain-containing protein;pseudo=true;transl_table=11 NZ_CP116216.1 RefSeq gene 90505 91527 . - . ID=gene-PHA56_RS30475;Name=PHA56_RS30475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS30475;old_locus_tag=PHA56_30475 NZ_CP116216.1 Protein Homology CDS 90505 91527 . - 0 ID=cds-WP_000156887.1-5;Parent=gene-PHA56_RS30475;Dbxref=Genbank:WP_000156887.1;Name=WP_000156887.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612074.1;locus_tag=PHA56_RS30475;product=IS110 family transposase;protein_id=WP_000156887.1;transl_table=11 NZ_CP116216.1 RefSeq pseudogene 91524 92999 . - . ID=gene-PHA56_RS30480;Name=PHA56_RS30480;end_range=92999,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS30480;old_locus_tag=PHA56_30480;partial=true;pseudo=true NZ_CP116216.1 Protein Homology CDS 91524 92999 . - 0 ID=cds-PHA56_RS30480;Parent=gene-PHA56_RS30480;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;end_range=92999,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004186929.1;locus_tag=PHA56_RS30480;partial=true;product=Tn3 family transposase;pseudo=true;transl_table=11 NZ_CP116216.1 RefSeq pseudogene 92988 93266 . + . ID=gene-PHA56_RS30485;Name=PHA56_RS30485;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS30485;old_locus_tag=PHA56_30485;partial=true;pseudo=true;start_range=.,92988 NZ_CP116216.1 Protein Homology CDS 92988 93266 . + 0 ID=cds-PHA56_RS30485;Parent=gene-PHA56_RS30485;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611340.1;locus_tag=PHA56_RS30485;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,92988;transl_table=11 NZ_CP116216.1 RefSeq gene 93469 94278 . - . ID=gene-PHA56_RS30490;Name=hutG;gbkey=Gene;gene=hutG;gene_biotype=protein_coding;locus_tag=PHA56_RS30490;old_locus_tag=PHA56_30490 NZ_CP116216.1 Protein Homology CDS 93469 94278 . - 0 ID=cds-WP_004118865.1;Parent=gene-PHA56_RS30490;Dbxref=Genbank:WP_004118865.1;Name=WP_004118865.1;Ontology_term=GO:0019557,GO:0050129;gbkey=CDS;gene=hutG;go_function=N-formylglutamate deformylase activity|0050129||IEA;go_process=histidine catabolic process to glutamate and formate|0019557||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009652944.1;locus_tag=PHA56_RS30490;product=N-formylglutamate deformylase;protein_id=WP_004118865.1;transl_table=11 NZ_CP116216.1 RefSeq gene 94271 95479 . - . ID=gene-PHA56_RS30495;Name=hutI;gbkey=Gene;gene=hutI;gene_biotype=protein_coding;locus_tag=PHA56_RS30495;old_locus_tag=PHA56_30495 NZ_CP116216.1 Protein Homology CDS 94271 95479 . - 0 ID=cds-WP_004118868.1;Parent=gene-PHA56_RS30495;Dbxref=Genbank:WP_004118868.1;Name=WP_004118868.1;Ontology_term=GO:0006548,GO:0050480;gbkey=CDS;gene=hutI;go_function=imidazolonepropionase activity|0050480||IEA;go_process=histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004848034.1;locus_tag=PHA56_RS30495;product=imidazolonepropionase;protein_id=WP_004118868.1;transl_table=11 NZ_CP116216.1 RefSeq gene 95491 96882 . - . ID=gene-PHA56_RS30500;Name=PHA56_RS30500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS30500;old_locus_tag=PHA56_30500 NZ_CP116216.1 Protein Homology CDS 95491 96882 . - 0 ID=cds-WP_154970958.1;Parent=gene-PHA56_RS30500;Dbxref=Genbank:WP_154970958.1;Name=WP_154970958.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004848032.1;locus_tag=PHA56_RS30500;product=cytosine permease;protein_id=WP_154970958.1;transl_table=11 NZ_CP116216.1 RefSeq gene 96935 98611 . - . ID=gene-PHA56_RS30505;Name=hutU;gbkey=Gene;gene=hutU;gene_biotype=protein_coding;locus_tag=PHA56_RS30505;old_locus_tag=PHA56_30505 NZ_CP116216.1 Protein Homology CDS 96935 98611 . - 0 ID=cds-WP_040118402.1;Parent=gene-PHA56_RS30505;Dbxref=Genbank:WP_040118402.1;Name=WP_040118402.1;Ontology_term=GO:0006548,GO:0016153;gbkey=CDS;gene=hutU;go_function=urocanate hydratase activity|0016153||IEA;go_process=histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004118875.1;locus_tag=PHA56_RS30505;product=urocanate hydratase;protein_id=WP_040118402.1;transl_table=11 NZ_CP116216.1 RefSeq pseudogene 99120 100116 . + . ID=gene-PHA56_RS30510;Name=PHA56_RS30510;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS30510;old_locus_tag=PHA56_30510;pseudo=true NZ_CP116216.1 Protein Homology CDS 99120 100116 . + 0 ID=cds-PHA56_RS30510;Parent=gene-PHA56_RS30510;Note=frameshifted%3B internal stop;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004848028.1;locus_tag=PHA56_RS30510;product=ATP-binding cassette domain-containing protein;pseudo=true;transl_table=11 NZ_CP116216.1 RefSeq pseudogene 100149 100758 . + . ID=gene-PHA56_RS30515;Name=PHA56_RS30515;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS30515;old_locus_tag=PHA56_30515;pseudo=true NZ_CP116216.1 Protein Homology CDS 100149 100758 . + 0 ID=cds-PHA56_RS30515;Parent=gene-PHA56_RS30515;Note=frameshifted;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009111300.1;locus_tag=PHA56_RS30515;product=ABC transporter permease subunit;pseudo=true;transl_table=11 NZ_CP116216.1 RefSeq pseudogene 100818 101327 . + . ID=gene-PHA56_RS30520;Name=PHA56_RS30520;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS30520;old_locus_tag=PHA56_30520;partial=true;pseudo=true;start_range=.,100818 NZ_CP116216.1 Protein Homology CDS 100818 101327 . + 0 ID=cds-PHA56_RS30520;Parent=gene-PHA56_RS30520;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004848018.1;locus_tag=PHA56_RS30520;partial=true;product=aromatic amino acid lyase;pseudo=true;start_range=.,100818;transl_table=11 NZ_CP116216.1 RefSeq gene 101361 101918 . - . ID=gene-PHA56_RS30525;Name=PHA56_RS30525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS30525;old_locus_tag=PHA56_30525 NZ_CP116216.1 Protein Homology CDS 101361 101918 . - 0 ID=cds-WP_040118404.1;Parent=gene-PHA56_RS30525;Dbxref=Genbank:WP_040118404.1;Name=WP_040118404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017900872.1;locus_tag=PHA56_RS30525;product=HutD family protein;protein_id=WP_040118404.1;transl_table=11 NZ_CP116216.1 RefSeq gene 101915 102676 . - . ID=gene-PHA56_RS30530;Name=hutC;gbkey=Gene;gene=hutC;gene_biotype=protein_coding;locus_tag=PHA56_RS30530;old_locus_tag=PHA56_30530 NZ_CP116216.1 Protein Homology CDS 101915 102676 . - 0 ID=cds-WP_032413289.1;Parent=gene-PHA56_RS30530;Dbxref=Genbank:WP_032413289.1;Name=WP_032413289.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=hutC;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017900871.1;locus_tag=PHA56_RS30530;product=histidine utilization repressor;protein_id=WP_032413289.1;transl_table=11 NZ_CP116216.1 RefSeq gene 102775 104142 . + . ID=gene-PHA56_RS30535;Name=PHA56_RS30535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS30535;old_locus_tag=PHA56_30535 NZ_CP116216.1 Protein Homology CDS 102775 104142 . + 0 ID=cds-WP_004118890.1;Parent=gene-PHA56_RS30535;Dbxref=Genbank:WP_004118890.1;Name=WP_004118890.1;Ontology_term=GO:0016810;gbkey=CDS;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004848011.1;locus_tag=PHA56_RS30535;product=formimidoylglutamate deiminase;protein_id=WP_004118890.1;transl_table=11 NZ_CP116216.1 RefSeq pseudogene 104365 105056 . - . ID=gene-PHA56_RS30540;Name=PHA56_RS30540;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS30540;old_locus_tag=PHA56_30540;pseudo=true NZ_CP116216.1 Protein Homology CDS 104365 105056 . - 0 ID=cds-PHA56_RS30540;Parent=gene-PHA56_RS30540;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=PHA56_RS30540;product=IS1 family transposase;pseudo=true;transl_table=11 NZ_CP116216.1 RefSeq gene 105862 107268 . + . ID=gene-PHA56_RS30545;Name=PHA56_RS30545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS30545;old_locus_tag=PHA56_30545 NZ_CP116216.1 Protein Homology CDS 105862 107268 . + 0 ID=cds-WP_004118895.1;Parent=gene-PHA56_RS30545;Dbxref=Genbank:WP_004118895.1;Name=WP_004118895.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004190776.1;locus_tag=PHA56_RS30545;product=cytosine permease;protein_id=WP_004118895.1;transl_table=11 NZ_CP116216.1 RefSeq gene 107305 108894 . + . ID=gene-PHA56_RS30550;Name=PHA56_RS30550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS30550;old_locus_tag=PHA56_30550 NZ_CP116216.1 Protein Homology CDS 107305 108894 . + 0 ID=cds-WP_004118898.1;Parent=gene-PHA56_RS30550;Dbxref=Genbank:WP_004118898.1;Name=WP_004118898.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017736575.1;locus_tag=PHA56_RS30550;product=AMP-binding protein;protein_id=WP_004118898.1;transl_table=11 NZ_CP116216.1 RefSeq gene 108891 109883 . + . ID=gene-PHA56_RS30555;Name=PHA56_RS30555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS30555;old_locus_tag=PHA56_30555 NZ_CP116216.1 Protein Homology CDS 108891 109883 . + 0 ID=cds-WP_004118901.1;Parent=gene-PHA56_RS30555;Dbxref=Genbank:WP_004118901.1;Name=WP_004118901.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: protein motif:HMM:NF013488.2;locus_tag=PHA56_RS30555;product=DsbA family protein;protein_id=WP_004118901.1;transl_table=11 NZ_CP116216.1 RefSeq pseudogene 110001 110108 . - . ID=gene-PHA56_RS30560;Name=PHA56_RS30560;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS30560;old_locus_tag=PHA56_30560;partial=true;pseudo=true;start_range=.,110001 NZ_CP116216.1 Protein Homology CDS 110001 110108 . - 0 ID=cds-PHA56_RS30560;Parent=gene-PHA56_RS30560;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000108571.1;locus_tag=PHA56_RS30560;partial=true;product=antirestriction protein ArdA;pseudo=true;start_range=.,110001;transl_table=11 NZ_CP116216.1 RefSeq pseudogene 110510 110859 . + . ID=gene-PHA56_RS30565;Name=PHA56_RS30565;end_range=110859,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS30565;old_locus_tag=PHA56_30565;partial=true;pseudo=true NZ_CP116216.1 Protein Homology CDS 110510 110859 . + 0 ID=cds-PHA56_RS30565;Parent=gene-PHA56_RS30565;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=110859,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558270.1;locus_tag=PHA56_RS30565;partial=true;product=IS1-like element transposase;pseudo=true;transl_table=11 NZ_CP116216.1 RefSeq pseudogene 110871 112046 . - . ID=gene-PHA56_RS30570;Name=PHA56_RS30570;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS30570;old_locus_tag=PHA56_30570;pseudo=true NZ_CP116216.1 Protein Homology CDS 110871 112046 . - 0 ID=cds-PHA56_RS30570;Parent=gene-PHA56_RS30570;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611434.1;locus_tag=PHA56_RS30570;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_CP116216.1 RefSeq gene 112123 113088 . - . ID=gene-PHA56_RS30575;Name=PHA56_RS30575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS30575;old_locus_tag=PHA56_30575 NZ_CP116216.1 Protein Homology CDS 112123 113088 . - 0 ID=cds-WP_004118922.1;Parent=gene-PHA56_RS30575;Dbxref=Genbank:WP_004118922.1;Name=WP_004118922.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004118922.1;locus_tag=PHA56_RS30575;product=DMT family transporter;protein_id=WP_004118922.1;transl_table=11 NZ_CP116216.1 RefSeq gene 113085 113903 . - . ID=gene-PHA56_RS30580;Name=PHA56_RS30580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS30580;old_locus_tag=PHA56_30580 NZ_CP116216.1 Protein Homology CDS 113085 113903 . - 0 ID=cds-WP_004118925.1;Parent=gene-PHA56_RS30580;Dbxref=Genbank:WP_004118925.1;Name=WP_004118925.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014837252.1;locus_tag=PHA56_RS30580;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_004118925.1;transl_table=11 NZ_CP116216.1 RefSeq gene 113908 114570 . - . ID=gene-PHA56_RS30585;Name=PHA56_RS30585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS30585;old_locus_tag=PHA56_30585 NZ_CP116216.1 Protein Homology CDS 113908 114570 . - 0 ID=cds-WP_004118928.1;Parent=gene-PHA56_RS30585;Dbxref=Genbank:WP_004118928.1;Name=WP_004118928.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017901244.1;locus_tag=PHA56_RS30585;product=amino acid ABC transporter permease;protein_id=WP_004118928.1;transl_table=11 NZ_CP116216.1 RefSeq gene 114567 115238 . - . ID=gene-PHA56_RS30590;Name=PHA56_RS30590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS30590;old_locus_tag=PHA56_30590 NZ_CP116216.1 Protein Homology CDS 114567 115238 . - 0 ID=cds-WP_004118931.1;Parent=gene-PHA56_RS30590;Dbxref=Genbank:WP_004118931.1;Name=WP_004118931.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004118153.1;locus_tag=PHA56_RS30590;product=amino acid ABC transporter permease;protein_id=WP_004118931.1;transl_table=11 NZ_CP116216.1 RefSeq gene 115262 116110 . - . ID=gene-PHA56_RS30595;Name=PHA56_RS30595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS30595;old_locus_tag=PHA56_30595 NZ_CP116216.1 Protein Homology CDS 115262 116110 . - 0 ID=cds-WP_004118155.1;Parent=gene-PHA56_RS30595;Dbxref=Genbank:WP_004118155.1;Name=WP_004118155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004206591.1;locus_tag=PHA56_RS30595;product=transporter substrate-binding domain-containing protein;protein_id=WP_004118155.1;transl_table=11 NZ_CP116216.1 RefSeq gene 116267 117220 . + . ID=gene-PHA56_RS30600;Name=PHA56_RS30600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS30600;old_locus_tag=PHA56_30600 NZ_CP116216.1 Protein Homology CDS 116267 117220 . + 0 ID=cds-WP_004118935.1;Parent=gene-PHA56_RS30600;Dbxref=Genbank:WP_004118935.1;Name=WP_004118935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004118935.1;locus_tag=PHA56_RS30600;product=LysR substrate-binding domain-containing protein;protein_id=WP_004118935.1;transl_table=11 NZ_CP116216.1 RefSeq gene 117307 118518 . + . ID=gene-PHA56_RS30605;Name=PHA56_RS30605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS30605;old_locus_tag=PHA56_30605 NZ_CP116216.1 Protein Homology CDS 117307 118518 . + 0 ID=cds-WP_004118158.1;Parent=gene-PHA56_RS30605;Dbxref=Genbank:WP_004118158.1;Name=WP_004118158.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019690428.1;locus_tag=PHA56_RS30605;product=M24 family metallopeptidase;protein_id=WP_004118158.1;transl_table=11 NZ_CP116216.1 RefSeq gene 118649 119617 . + . ID=gene-PHA56_RS30610;Name=PHA56_RS30610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS30610;old_locus_tag=PHA56_30610 NZ_CP116216.1 Protein Homology CDS 118649 119617 . + 0 ID=cds-WP_077260293.1;Parent=gene-PHA56_RS30610;Dbxref=Genbank:WP_077260293.1;Name=WP_077260293.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1;locus_tag=PHA56_RS30610;product=IS5 family transposase;protein_id=WP_077260293.1;transl_table=11 NZ_CP116216.1 RefSeq gene 119834 120421 . - . ID=gene-PHA56_RS30615;Name=PHA56_RS30615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS30615;old_locus_tag=PHA56_30615 NZ_CP116216.1 Protein Homology CDS 119834 120421 . - 0 ID=cds-WP_032716672.1;Parent=gene-PHA56_RS30615;Dbxref=Genbank:WP_032716672.1;Name=WP_032716672.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004152380.1;locus_tag=PHA56_RS30615;product=fertility inhibition protein FinO;protein_id=WP_032716672.1;transl_table=11 NZ_CP116216.1 RefSeq gene 120563 121288 . - . ID=gene-PHA56_RS30620;Name=traX;gbkey=Gene;gene=traX;gene_biotype=protein_coding;locus_tag=PHA56_RS30620;old_locus_tag=PHA56_30620 NZ_CP116216.1 Protein Homology CDS 120563 121288 . - 0 ID=cds-WP_040118407.1;Parent=gene-PHA56_RS30620;Dbxref=Genbank:WP_040118407.1;Name=WP_040118407.1;gbkey=CDS;gene=traX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020315135.1;locus_tag=PHA56_RS30620;product=type-F conjugative transfer system pilin acetylase TraX;protein_id=WP_040118407.1;transl_table=11 NZ_CP116216.1 RefSeq gene 121381 126645 . - . ID=gene-PHA56_RS30625;Name=traI;gbkey=Gene;gene=traI;gene_biotype=protein_coding;locus_tag=PHA56_RS30625;old_locus_tag=PHA56_30625 NZ_CP116216.1 Protein Homology CDS 121381 126645 . - 0 ID=cds-WP_040118408.1;Parent=gene-PHA56_RS30625;Dbxref=Genbank:WP_040118408.1;Name=WP_040118408.1;Ontology_term=GO:0003677,GO:0003678,GO:0005524,GO:0016818;gbkey=CDS;gene=traI;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229687.1;locus_tag=PHA56_RS30625;product=conjugative transfer relaxase/helicase TraI;protein_id=WP_040118408.1;transl_table=11 NZ_CP116216.1 RefSeq gene 126645 128975 . - . ID=gene-PHA56_RS30630;Name=traD;gbkey=Gene;gene=traD;gene_biotype=protein_coding;locus_tag=PHA56_RS30630;old_locus_tag=PHA56_30630 NZ_CP116216.1 Protein Homology CDS 126645 128975 . - 0 ID=cds-WP_040118437.1;Parent=gene-PHA56_RS30630;Dbxref=Genbank:WP_040118437.1;Name=WP_040118437.1;gbkey=CDS;gene=traD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004152630.1;locus_tag=PHA56_RS30630;product=type IV conjugative transfer system coupling protein TraD;protein_id=WP_040118437.1;transl_table=11 NZ_CP116216.1 RefSeq gene 129169 129900 . - . ID=gene-PHA56_RS30635;Name=traT;gbkey=Gene;gene=traT;gene_biotype=protein_coding;locus_tag=PHA56_RS30635;old_locus_tag=PHA56_30635 NZ_CP116216.1 Protein Homology CDS 129169 129900 . - 0 ID=cds-WP_032716670.1;Parent=gene-PHA56_RS30635;Dbxref=Genbank:WP_032716670.1;Name=WP_032716670.1;gbkey=CDS;gene=traT;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229690.1;locus_tag=PHA56_RS30635;product=complement resistance protein TraT;protein_id=WP_032716670.1;transl_table=11 NZ_CP116216.1 RefSeq gene 130095 130709 . - . ID=gene-PHA56_RS30640;Name=PHA56_RS30640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS30640;old_locus_tag=PHA56_30640 NZ_CP116216.1 Protein Homology CDS 130095 130709 . - 0 ID=cds-WP_032732092.1;Parent=gene-PHA56_RS30640;Dbxref=Genbank:WP_032732092.1;Name=WP_032732092.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022091.2;locus_tag=PHA56_RS30640;product=hypothetical protein;protein_id=WP_032732092.1;transl_table=11 NZ_CP116216.1 RefSeq gene 130735 133557 . - . ID=gene-PHA56_RS30645;Name=traG;gbkey=Gene;gene=traG;gene_biotype=protein_coding;locus_tag=PHA56_RS30645;old_locus_tag=PHA56_30645 NZ_CP116216.1 Protein Homology CDS 130735 133557 . - 0 ID=cds-WP_040118409.1;Parent=gene-PHA56_RS30645;Dbxref=Genbank:WP_040118409.1;Name=WP_040118409.1;gbkey=CDS;gene=traG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020316632.1;locus_tag=PHA56_RS30645;product=conjugal transfer mating pair stabilization protein TraG;protein_id=WP_040118409.1;transl_table=11 NZ_CP116216.1 RefSeq gene 133557 134927 . - . ID=gene-PHA56_RS30650;Name=PHA56_RS30650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS30650;old_locus_tag=PHA56_30650 NZ_CP116216.1 Protein Homology CDS 133557 134927 . - 0 ID=cds-WP_032700807.1;Parent=gene-PHA56_RS30650;Dbxref=Genbank:WP_032700807.1;Name=WP_032700807.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004159274.1;locus_tag=PHA56_RS30650;product=conjugal transfer protein TraH;protein_id=WP_032700807.1;transl_table=11 NZ_CP116216.1 RefSeq gene 134914 135342 . - . ID=gene-PHA56_RS30655;Name=PHA56_RS30655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS30655;old_locus_tag=PHA56_30655 NZ_CP116216.1 Protein Homology CDS 134914 135342 . - 0 ID=cds-WP_032700808.1;Parent=gene-PHA56_RS30655;Dbxref=Genbank:WP_032700808.1;Name=WP_032700808.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019725059.1;locus_tag=PHA56_RS30655;product=conjugal transfer protein TrbF;protein_id=WP_032700808.1;transl_table=11 NZ_CP116216.1 RefSeq gene 135335 135901 . - . ID=gene-PHA56_RS30660;Name=trbB;gbkey=Gene;gene=trbB;gene_biotype=protein_coding;locus_tag=PHA56_RS30660;old_locus_tag=PHA56_30660 NZ_CP116216.1 Protein Homology CDS 135335 135901 . - 0 ID=cds-WP_032732090.1;Parent=gene-PHA56_RS30660;Dbxref=Genbank:WP_032732090.1;Name=WP_032732090.1;gbkey=CDS;gene=trbB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004152688.1;locus_tag=PHA56_RS30660;product=type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB;protein_id=WP_032732090.1;transl_table=11 NZ_CP116216.1 RefSeq gene 135876 136112 . - . ID=gene-PHA56_RS30665;Name=traQ;gbkey=Gene;gene=traQ;gene_biotype=protein_coding;locus_tag=PHA56_RS30665;old_locus_tag=PHA56_30665 NZ_CP116216.1 Protein Homology CDS 135876 136112 . - 0 ID=cds-WP_032700810.1;Parent=gene-PHA56_RS30665;Dbxref=Genbank:WP_032700810.1;Name=WP_032700810.1;gbkey=CDS;gene=traQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009309875.1;locus_tag=PHA56_RS30665;product=type-F conjugative transfer system pilin chaperone TraQ;protein_id=WP_032700810.1;transl_table=11 NZ_CP116216.1 RefSeq gene 136123 136875 . - . ID=gene-PHA56_RS30670;Name=traF;gbkey=Gene;gene=traF;gene_biotype=protein_coding;locus_tag=PHA56_RS30670;old_locus_tag=PHA56_30670 NZ_CP116216.1 Protein Homology CDS 136123 136875 . - 0 ID=cds-WP_040118410.1;Parent=gene-PHA56_RS30670;Dbxref=Genbank:WP_040118410.1;Name=WP_040118410.1;gbkey=CDS;gene=traF;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229697.1;locus_tag=PHA56_RS30670;product=type-F conjugative transfer system pilin assembly protein TraF;protein_id=WP_040118410.1;transl_table=11 NZ_CP116216.1 RefSeq gene 136898 137224 . - . ID=gene-PHA56_RS30675;Name=PHA56_RS30675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS30675;old_locus_tag=PHA56_30675 NZ_CP116216.1 Protein Homology CDS 136898 137224 . - 0 ID=cds-WP_032700812.1;Parent=gene-PHA56_RS30675;Dbxref=Genbank:WP_032700812.1;Name=WP_032700812.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013214030.1;locus_tag=PHA56_RS30675;product=hypothetical protein;protein_id=WP_032700812.1;transl_table=11 NZ_CP116216.1 RefSeq gene 137514 138482 . - . ID=gene-PHA56_RS30680;Name=PHA56_RS30680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS30680;old_locus_tag=PHA56_30680 NZ_CP116216.1 Protein Homology CDS 137514 138482 . - 0 ID=cds-WP_077255412.1;Parent=gene-PHA56_RS30680;Dbxref=Genbank:WP_077255412.1;Name=WP_077255412.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1;locus_tag=PHA56_RS30680;product=IS5 family transposase;protein_id=WP_077255412.1;transl_table=11 NZ_CP116216.1 RefSeq gene 138562 140517 . - . ID=gene-PHA56_RS30685;Name=traN;gbkey=Gene;gene=traN;gene_biotype=protein_coding;locus_tag=PHA56_RS30685;old_locus_tag=PHA56_30685 NZ_CP116216.1 Protein Homology CDS 138562 140517 . - 0 ID=cds-WP_040118411.1;Parent=gene-PHA56_RS30685;Dbxref=Genbank:WP_040118411.1;Name=WP_040118411.1;gbkey=CDS;gene=traN;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229701.1;locus_tag=PHA56_RS30685;product=type-F conjugative transfer system mating-pair stabilization protein TraN;protein_id=WP_040118411.1;transl_table=11 NZ_CP116216.1 RefSeq gene 140517 141146 . - . ID=gene-PHA56_RS30690;Name=trbC;gbkey=Gene;gene=trbC;gene_biotype=protein_coding;locus_tag=PHA56_RS30690;old_locus_tag=PHA56_30690 NZ_CP116216.1 Protein Homology CDS 140517 141146 . - 0 ID=cds-WP_032700817.1;Parent=gene-PHA56_RS30690;Dbxref=Genbank:WP_032700817.1;Name=WP_032700817.1;gbkey=CDS;gene=trbC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001568086.1;locus_tag=PHA56_RS30690;product=type-F conjugative transfer system pilin assembly protein TrbC;protein_id=WP_032700817.1;transl_table=11 NZ_CP116216.1 RefSeq gene 141159 142118 . - . ID=gene-PHA56_RS30695;Name=PHA56_RS30695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS30695;old_locus_tag=PHA56_30695 NZ_CP116216.1 Protein Homology CDS 141159 142118 . - 0 ID=cds-WP_032716690.1;Parent=gene-PHA56_RS30695;Dbxref=Genbank:WP_032716690.1;Name=WP_032716690.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016479984.1;locus_tag=PHA56_RS30695;product=conjugal transfer pilus assembly protein TraU;protein_id=WP_032716690.1;transl_table=11 NZ_CP116216.1 RefSeq gene 142159 142788 . - . ID=gene-PHA56_RS30700;Name=traW;gbkey=Gene;gene=traW;gene_biotype=protein_coding;locus_tag=PHA56_RS30700;old_locus_tag=PHA56_30700 NZ_CP116216.1 Protein Homology CDS 142159 142788 . - 0 ID=cds-WP_032716660.1;Parent=gene-PHA56_RS30700;Dbxref=Genbank:WP_032716660.1;Name=WP_032716660.1;gbkey=CDS;gene=traW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004966201.1;locus_tag=PHA56_RS30700;product=type-F conjugative transfer system protein TraW;protein_id=WP_032716660.1;transl_table=11 NZ_CP116216.1 RefSeq gene 142785 143177 . - . ID=gene-PHA56_RS30705;Name=trbI;gbkey=Gene;gene=trbI;gene_biotype=protein_coding;locus_tag=PHA56_RS30705;old_locus_tag=PHA56_30705 NZ_CP116216.1 Protein Homology CDS 142785 143177 . - 0 ID=cds-WP_032716659.1;Parent=gene-PHA56_RS30705;Dbxref=Genbank:WP_032716659.1;Name=WP_032716659.1;gbkey=CDS;gene=trbI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020326931.1;locus_tag=PHA56_RS30705;product=type-F conjugative transfer system protein TrbI;protein_id=WP_032716659.1;transl_table=11 NZ_CP116216.1 RefSeq gene 143177 145816 . - . ID=gene-PHA56_RS30710;Name=traC;gbkey=Gene;gene=traC;gene_biotype=protein_coding;locus_tag=PHA56_RS30710;old_locus_tag=PHA56_30710 NZ_CP116216.1 Protein Homology CDS 143177 145816 . - 0 ID=cds-WP_032716658.1;Parent=gene-PHA56_RS30710;Dbxref=Genbank:WP_032716658.1;Name=WP_032716658.1;gbkey=CDS;gene=traC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001568090.1;locus_tag=PHA56_RS30710;product=type IV secretion system protein TraC;protein_id=WP_032716658.1;transl_table=11 NZ_CP116216.1 RefSeq gene 145896 146285 . - . ID=gene-PHA56_RS30715;Name=PHA56_RS30715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS30715;old_locus_tag=PHA56_30715 NZ_CP116216.1 Protein Homology CDS 145896 146285 . - 0 ID=cds-WP_040118412.1;Parent=gene-PHA56_RS30715;Dbxref=Genbank:WP_040118412.1;Name=WP_040118412.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004197816.1;locus_tag=PHA56_RS30715;product=hypothetical protein;protein_id=WP_040118412.1;transl_table=11 NZ_CP116216.1 RefSeq gene 146662 147066 . - . ID=gene-PHA56_RS30720;Name=PHA56_RS30720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS30720;old_locus_tag=PHA56_30720 NZ_CP116216.1 Protein Homology CDS 146662 147066 . - 0 ID=cds-WP_040118414.1;Parent=gene-PHA56_RS30720;Dbxref=Genbank:WP_040118414.1;Name=WP_040118414.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004152594.1;locus_tag=PHA56_RS30720;product=hypothetical protein;protein_id=WP_040118414.1;transl_table=11 NZ_CP116216.1 RefSeq gene 147063 147284 . - . ID=gene-PHA56_RS30725;Name=PHA56_RS30725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS30725;old_locus_tag=PHA56_30725 NZ_CP116216.1 Protein Homology CDS 147063 147284 . - 0 ID=cds-WP_032732073.1;Parent=gene-PHA56_RS30725;Dbxref=Genbank:WP_032732073.1;Name=WP_032732073.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000556745.1;locus_tag=PHA56_RS30725;product=hypothetical protein;protein_id=WP_032732073.1;transl_table=11 NZ_CP116216.1 RefSeq gene 147766 148245 . - . ID=gene-PHA56_RS30730;Name=PHA56_RS30730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS30730;old_locus_tag=PHA56_30730 NZ_CP116216.1 Protein Homology CDS 147766 148245 . - 0 ID=cds-WP_223306708.1;Parent=gene-PHA56_RS30730;Dbxref=Genbank:WP_223306708.1;Name=WP_223306708.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009652471.1;locus_tag=PHA56_RS30730;product=hypothetical protein;protein_id=WP_223306708.1;transl_table=11 NZ_CP116216.1 RefSeq gene 148352 148921 . - . ID=gene-PHA56_RS30735;Name=traV;gbkey=Gene;gene=traV;gene_biotype=protein_coding;locus_tag=PHA56_RS30735;old_locus_tag=PHA56_30735 NZ_CP116216.1 Protein Homology CDS 148352 148921 . - 0 ID=cds-WP_071889124.1;Parent=gene-PHA56_RS30735;Dbxref=Genbank:WP_071889124.1;Name=WP_071889124.1;gbkey=CDS;gene=traV;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016233168.1;locus_tag=PHA56_RS30735;product=type IV conjugative transfer system lipoprotein TraV;protein_id=WP_071889124.1;transl_table=11 NZ_CP116216.1 RefSeq gene 148940 149146 . - . ID=gene-PHA56_RS30740;Name=PHA56_RS30740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS30740;old_locus_tag=PHA56_30740 NZ_CP116216.1 GeneMarkS-2+ CDS 148940 149146 . - 0 ID=cds-WP_032700826.1;Parent=gene-PHA56_RS30740;Dbxref=Genbank:WP_032700826.1;Name=WP_032700826.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PHA56_RS30740;product=hypothetical protein;protein_id=WP_032700826.1;transl_table=11 NZ_CP116216.1 RefSeq gene 149127 149723 . - . ID=gene-PHA56_RS30745;Name=PHA56_RS30745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS30745;old_locus_tag=PHA56_30745 NZ_CP116216.1 Protein Homology CDS 149127 149723 . - 0 ID=cds-WP_119834738.1;Parent=gene-PHA56_RS30745;Dbxref=Genbank:WP_119834738.1;Name=WP_119834738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004152599.1;locus_tag=PHA56_RS30745;product=conjugal transfer protein TraP;protein_id=WP_119834738.1;transl_table=11 NZ_CP116216.1 RefSeq gene 149716 151134 . - . ID=gene-PHA56_RS30750;Name=PHA56_RS30750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS30750;old_locus_tag=PHA56_30750 NZ_CP116216.1 Protein Homology CDS 149716 151134 . - 0 ID=cds-WP_040118415.1;Parent=gene-PHA56_RS30750;Dbxref=Genbank:WP_040118415.1;Name=WP_040118415.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229715.1;locus_tag=PHA56_RS30750;product=conjugal transfer protein TraB;protein_id=WP_040118415.1;transl_table=11 NZ_CP116216.1 RefSeq gene 151134 151868 . - . ID=gene-PHA56_RS30755;Name=traK;gbkey=Gene;gene=traK;gene_biotype=protein_coding;locus_tag=PHA56_RS30755;old_locus_tag=PHA56_30755 NZ_CP116216.1 Protein Homology CDS 151134 151868 . - 0 ID=cds-WP_040118416.1;Parent=gene-PHA56_RS30755;Dbxref=Genbank:WP_040118416.1;Name=WP_040118416.1;gbkey=CDS;gene=traK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001568101.1;locus_tag=PHA56_RS30755;product=type-F conjugative transfer system secretin TraK;protein_id=WP_040118416.1;transl_table=11 NZ_CP116216.1 RefSeq gene 151855 152421 . - . ID=gene-PHA56_RS30760;Name=traE;gbkey=Gene;gene=traE;gene_biotype=protein_coding;locus_tag=PHA56_RS30760;old_locus_tag=PHA56_30760 NZ_CP116216.1 Protein Homology CDS 151855 152421 . - 0 ID=cds-WP_040118417.1;Parent=gene-PHA56_RS30760;Dbxref=Genbank:WP_040118417.1;Name=WP_040118417.1;gbkey=CDS;gene=traE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229717.1;locus_tag=PHA56_RS30760;product=type IV conjugative transfer system protein TraE;protein_id=WP_040118417.1;transl_table=11 NZ_CP116216.1 RefSeq gene 152441 152746 . - . ID=gene-PHA56_RS30765;Name=traL;gbkey=Gene;gene=traL;gene_biotype=protein_coding;locus_tag=PHA56_RS30765;old_locus_tag=PHA56_30765 NZ_CP116216.1 Protein Homology CDS 152441 152746 . - 0 ID=cds-WP_020323523.1;Parent=gene-PHA56_RS30765;Dbxref=Genbank:WP_020323523.1;Name=WP_020323523.1;gbkey=CDS;gene=traL;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229718.1;locus_tag=PHA56_RS30765;product=type IV conjugative transfer system protein TraL;protein_id=WP_020323523.1;transl_table=11 NZ_CP116216.1 RefSeq gene 152760 153128 . - . ID=gene-PHA56_RS30770;Name=traA;gbkey=Gene;gene=traA;gene_biotype=protein_coding;locus_tag=PHA56_RS30770;old_locus_tag=PHA56_30770 NZ_CP116216.1 Protein Homology CDS 152760 153128 . - 0 ID=cds-WP_047665734.1;Parent=gene-PHA56_RS30770;Dbxref=Genbank:WP_047665734.1;Name=WP_047665734.1;gbkey=CDS;gene=traA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229719.1;locus_tag=PHA56_RS30770;product=type IV conjugative transfer system pilin TraA;protein_id=WP_047665734.1;transl_table=11 NZ_CP116216.1 RefSeq gene 153190 153354 . - . ID=gene-PHA56_RS30775;Name=PHA56_RS30775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS30775;old_locus_tag=PHA56_30775 NZ_CP116216.1 Protein Homology CDS 153190 153354 . - 0 ID=cds-WP_032444506.1;Parent=gene-PHA56_RS30775;Dbxref=Genbank:WP_032444506.1;Name=WP_032444506.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000280363.1;locus_tag=PHA56_RS30775;product=TraY domain-containing protein;protein_id=WP_032444506.1;transl_table=11 NZ_CP116216.1 RefSeq gene 153532 154221 . - . ID=gene-PHA56_RS30780;Name=PHA56_RS30780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS30780;old_locus_tag=PHA56_30780 NZ_CP116216.1 Protein Homology CDS 153532 154221 . - 0 ID=cds-WP_071889125.1;Parent=gene-PHA56_RS30780;Dbxref=Genbank:WP_071889125.1;Name=WP_071889125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229721.1;locus_tag=PHA56_RS30780;product=hypothetical protein;protein_id=WP_071889125.1;transl_table=11 NZ_CP116216.1 RefSeq gene 154422 154811 . - . ID=gene-PHA56_RS30785;Name=traM;gbkey=Gene;gene=traM;gene_biotype=protein_coding;locus_tag=PHA56_RS30785;old_locus_tag=PHA56_30785 NZ_CP116216.1 Protein Homology CDS 154422 154811 . - 0 ID=cds-WP_032700831.1;Parent=gene-PHA56_RS30785;Dbxref=Genbank:WP_032700831.1;Name=WP_032700831.1;gbkey=CDS;gene=traM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001568107.1;locus_tag=PHA56_RS30785;product=relaxosome protein TraM;protein_id=WP_032700831.1;transl_table=11 NZ_CP116216.1 RefSeq gene 155236 155715 . + . ID=gene-PHA56_RS30790;Name=PHA56_RS30790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS30790;old_locus_tag=PHA56_30790 NZ_CP116216.1 Protein Homology CDS 155236 155715 . + 0 ID=cds-WP_032716648.1;Parent=gene-PHA56_RS30790;Dbxref=Genbank:WP_032716648.1;Name=WP_032716648.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004197738.1;locus_tag=PHA56_RS30790;product=transglycosylase SLT domain-containing protein;protein_id=WP_032716648.1;transl_table=11 NZ_CP116216.1 RefSeq gene 155753 156283 . - . ID=gene-PHA56_RS30795;Name=PHA56_RS30795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS30795;old_locus_tag=PHA56_30795 NZ_CP116216.1 Protein Homology CDS 155753 156283 . - 0 ID=cds-WP_032716647.1;Parent=gene-PHA56_RS30795;Dbxref=Genbank:WP_032716647.1;Name=WP_032716647.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000556933.1;locus_tag=PHA56_RS30795;product=antirestriction protein;protein_id=WP_032716647.1;transl_table=11 NZ_CP116216.1 RefSeq gene 156968 157114 . - . ID=gene-PHA56_RS30800;Name=PHA56_RS30800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS30800;old_locus_tag=PHA56_30800 NZ_CP116216.1 Protein Homology CDS 156968 157114 . - 0 ID=cds-WP_032700834.1;Parent=gene-PHA56_RS30800;Dbxref=Genbank:WP_032700834.1;Name=WP_032700834.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001403164.1;locus_tag=PHA56_RS30800;product=hypothetical protein;protein_id=WP_032700834.1;transl_table=11 NZ_CP116216.1 RefSeq gene 157208 157555 . - . ID=gene-PHA56_RS30805;Name=PHA56_RS30805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS30805;old_locus_tag=PHA56_30805 NZ_CP116216.1 Protein Homology CDS 157208 157555 . - 0 ID=cds-WP_032700835.1;Parent=gene-PHA56_RS30805;Dbxref=Genbank:WP_032700835.1;Name=WP_032700835.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004152749.1;locus_tag=PHA56_RS30805;product=hypothetical protein;protein_id=WP_032700835.1;transl_table=11 NZ_CP116216.1 RefSeq gene 157581 157739 . - . ID=gene-PHA56_RS30810;Name=PHA56_RS30810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS30810;old_locus_tag=PHA56_30810 NZ_CP116216.1 Protein Homology CDS 157581 157739 . - 0 ID=cds-WP_162180130.1;Parent=gene-PHA56_RS30810;Dbxref=Genbank:WP_162180130.1;Name=WP_162180130.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009651962.1;locus_tag=PHA56_RS30810;product=hypothetical protein;protein_id=WP_162180130.1;transl_table=11 NZ_CP116216.1 RefSeq gene 157796 158071 . - . ID=gene-PHA56_RS30815;Name=PHA56_RS30815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS30815;old_locus_tag=PHA56_30815 NZ_CP116216.1 Protein Homology CDS 157796 158071 . - 0 ID=cds-WP_032700867.1;Parent=gene-PHA56_RS30815;Dbxref=Genbank:WP_032700867.1;Name=WP_032700867.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004118955.1;locus_tag=PHA56_RS30815;product=hypothetical protein;protein_id=WP_032700867.1;transl_table=11 NZ_CP116216.1 RefSeq gene 158890 159171 . - . ID=gene-PHA56_RS30820;Name=PHA56_RS30820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS30820;old_locus_tag=PHA56_30820 NZ_CP116216.1 Protein Homology CDS 158890 159171 . - 0 ID=cds-WP_004118961.1;Parent=gene-PHA56_RS30820;Dbxref=Genbank:WP_004118961.1;Name=WP_004118961.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019077272.1;locus_tag=PHA56_RS30820;product=helix-turn-helix transcriptional regulator;protein_id=WP_004118961.1;transl_table=11 NZ_CP116216.1 RefSeq gene 159152 159481 . - . ID=gene-PHA56_RS30825;Name=PHA56_RS30825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS30825;old_locus_tag=PHA56_30825 NZ_CP116216.1 Protein Homology CDS 159152 159481 . - 0 ID=cds-WP_004118963.1;Parent=gene-PHA56_RS30825;Dbxref=Genbank:WP_004118963.1;Name=WP_004118963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001647051.1;locus_tag=PHA56_RS30825;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_004118963.1;transl_table=11 NZ_CP116216.1 RefSeq pseudogene 159801 159888 . - . ID=gene-PHA56_RS30830;Name=PHA56_RS30830;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS30830;old_locus_tag=PHA56_30830;partial=true;pseudo=true;start_range=.,159801 NZ_CP116216.1 Protein Homology CDS 159801 159888 . - 0 ID=cds-PHA56_RS30830;Parent=gene-PHA56_RS30830;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001562885.1;locus_tag=PHA56_RS30830;partial=true;product=theronine dehydrogenase;pseudo=true;start_range=.,159801;transl_table=11 NZ_CP116216.1 RefSeq gene 159885 160613 . - . ID=gene-PHA56_RS30835;Name=PHA56_RS30835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS30835;old_locus_tag=PHA56_30835 NZ_CP116216.1 Protein Homology CDS 159885 160613 . - 0 ID=cds-WP_004118966.1;Parent=gene-PHA56_RS30835;Dbxref=Genbank:WP_004118966.1;Name=WP_004118966.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020314934.1;locus_tag=PHA56_RS30835;product=plasmid SOS inhibition protein A;protein_id=WP_004118966.1;transl_table=11 NZ_CP116216.1 RefSeq gene 160610 161041 . - . ID=gene-PHA56_RS30840;Name=psiB;gbkey=Gene;gene=psiB;gene_biotype=protein_coding;locus_tag=PHA56_RS30840;old_locus_tag=PHA56_30840 NZ_CP116216.1 Protein Homology CDS 160610 161041 . - 0 ID=cds-WP_004118968.1;Parent=gene-PHA56_RS30840;Dbxref=Genbank:WP_004118968.1;Name=WP_004118968.1;gbkey=CDS;gene=psiB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001244368.1;locus_tag=PHA56_RS30840;product=conjugation system SOS inhibitor PsiB;protein_id=WP_004118968.1;transl_table=11 NZ_CP116216.1 RefSeq gene 161085 163142 . - . ID=gene-PHA56_RS30845;Name=PHA56_RS30845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS30845;old_locus_tag=PHA56_30845 NZ_CP116216.1 Protein Homology CDS 161085 163142 . - 0 ID=cds-WP_032700842.1;Parent=gene-PHA56_RS30845;Dbxref=Genbank:WP_032700842.1;Name=WP_032700842.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229746.1;locus_tag=PHA56_RS30845;product=ParB/RepB/Spo0J family partition protein;protein_id=WP_032700842.1;transl_table=11 NZ_CP116216.1 RefSeq gene 163210 163443 . - . ID=gene-PHA56_RS30850;Name=PHA56_RS30850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS30850;old_locus_tag=PHA56_30850 NZ_CP116216.1 Protein Homology CDS 163210 163443 . - 0 ID=cds-WP_009654057.1;Parent=gene-PHA56_RS30850;Dbxref=Genbank:WP_009654057.1;Name=WP_009654057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019106849.1;locus_tag=PHA56_RS30850;product=DUF905 domain-containing protein;protein_id=WP_009654057.1;transl_table=11 NZ_CP116216.1 RefSeq gene 163492 164040 . - . ID=gene-PHA56_RS30855;Name=ssb;gbkey=Gene;gene=ssb;gene_biotype=protein_coding;locus_tag=PHA56_RS30855;old_locus_tag=PHA56_30855 NZ_CP116216.1 Protein Homology CDS 163492 164040 . - 0 ID=cds-WP_009654061.1;Parent=gene-PHA56_RS30855;Dbxref=Genbank:WP_009654061.1;Name=WP_009654061.1;Ontology_term=GO:0006260,GO:0006281,GO:0006310,GO:0006351,GO:0003697;gbkey=CDS;gene=ssb;go_function=single-stranded DNA binding|0003697||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA,DNA recombination|0006310||IEA,DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229748.1;locus_tag=PHA56_RS30855;product=single-stranded DNA-binding protein;protein_id=WP_009654061.1;transl_table=11 NZ_CP116216.1 RefSeq pseudogene 164078 164212 . - . ID=gene-PHA56_RS30860;Name=PHA56_RS30860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS30860;old_locus_tag=PHA56_30860;partial=true;pseudo=true;start_range=.,164078 NZ_CP116216.1 Protein Homology CDS 164078 164212 . - 0 ID=cds-PHA56_RS30860;Parent=gene-PHA56_RS30860;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001087957.1;locus_tag=PHA56_RS30860;partial=true;product=single-stranded DNA-binding protein;pseudo=true;start_range=.,164078;transl_table=11 NZ_CP116216.1 RefSeq pseudogene 164379 164600 . + . ID=gene-PHA56_RS30865;Name=PHA56_RS30865;end_range=164600,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS30865;old_locus_tag=PHA56_30865;partial=true;pseudo=true NZ_CP116216.1 Protein Homology CDS 164379 164600 . + 0 ID=cds-PHA56_RS30865;Parent=gene-PHA56_RS30865;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=164600,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001311849.1;locus_tag=PHA56_RS30865;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP116216.1 RefSeq gene 164874 165437 . - . ID=gene-PHA56_RS30870;Name=PHA56_RS30870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS30870;old_locus_tag=PHA56_30870 NZ_CP116216.1 Protein Homology CDS 164874 165437 . - 0 ID=cds-WP_032700843.1;Parent=gene-PHA56_RS30870;Dbxref=Genbank:WP_032700843.1;Name=WP_032700843.1;Ontology_term=GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000556067.1;locus_tag=PHA56_RS30870;product=methyltransferase;protein_id=WP_032700843.1;transl_table=11 NZ_CP116216.1 RefSeq gene 165486 166868 . - . ID=gene-PHA56_RS30875;Name=PHA56_RS30875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS30875;old_locus_tag=PHA56_30875 NZ_CP116216.1 Protein Homology CDS 165486 166868 . - 0 ID=cds-WP_032700844.1;Parent=gene-PHA56_RS30875;Dbxref=Genbank:WP_032700844.1;Name=WP_032700844.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229751.1;locus_tag=PHA56_RS30875;product=DUF3560 domain-containing protein;protein_id=WP_032700844.1;transl_table=11 NZ_CP116216.1 RefSeq gene 166919 167149 . - . ID=gene-PHA56_RS30880;Name=PHA56_RS30880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS30880;old_locus_tag=PHA56_30880 NZ_CP116216.1 Protein Homology CDS 166919 167149 . - 0 ID=cds-WP_032700845.1;Parent=gene-PHA56_RS30880;Dbxref=Genbank:WP_032700845.1;Name=WP_032700845.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229752.1;locus_tag=PHA56_RS30880;product=hypothetical protein;protein_id=WP_032700845.1;transl_table=11 NZ_CP116216.1 RefSeq gene 167278 167526 . - . ID=gene-PHA56_RS30885;Name=PHA56_RS30885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS30885;old_locus_tag=PHA56_30885 NZ_CP116216.1 GeneMarkS-2+ CDS 167278 167526 . - 0 ID=cds-WP_223306709.1;Parent=gene-PHA56_RS30885;Dbxref=Genbank:WP_223306709.1;Name=WP_223306709.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PHA56_RS30885;product=hypothetical protein;protein_id=WP_223306709.1;transl_table=11 NZ_CP116216.1 RefSeq pseudogene 167622 167831 . + . ID=gene-PHA56_RS30890;Name=PHA56_RS30890;end_range=167831,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS30890;old_locus_tag=PHA56_30890;partial=true;pseudo=true;start_range=.,167622 NZ_CP116216.1 Protein Homology CDS 167622 167831 . + 0 ID=cds-PHA56_RS30890;Parent=gene-PHA56_RS30890;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=167831,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052655.1;locus_tag=PHA56_RS30890;partial=true;product=hypothetical protein;pseudo=true;start_range=.,167622;transl_table=11 NZ_CP116216.1 RefSeq gene 167942 168187 . - . ID=gene-PHA56_RS30895;Name=PHA56_RS30895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS30895;old_locus_tag=PHA56_30895 NZ_CP116216.1 Protein Homology CDS 167942 168187 . - 0 ID=cds-WP_074172513.1;Parent=gene-PHA56_RS30895;Dbxref=Genbank:WP_074172513.1;Name=WP_074172513.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009654058.1;locus_tag=PHA56_RS30895;product=DNA polymerase III subunit theta;protein_id=WP_074172513.1;transl_table=11 NZ_CP116216.1 RefSeq gene 168373 168564 . - . ID=gene-PHA56_RS30900;Name=PHA56_RS30900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS30900;old_locus_tag=PHA56_30900 NZ_CP116216.1 Protein Homology CDS 168373 168564 . - 0 ID=cds-WP_032700847.1;Parent=gene-PHA56_RS30900;Dbxref=Genbank:WP_032700847.1;Name=WP_032700847.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229757.1;locus_tag=PHA56_RS30900;product=hypothetical protein;protein_id=WP_032700847.1;transl_table=11 NZ_CP116216.1 RefSeq gene 168642 169070 . - . ID=gene-PHA56_RS30905;Name=PHA56_RS30905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS30905;old_locus_tag=PHA56_30905 NZ_CP116216.1 Protein Homology CDS 168642 169070 . - 0 ID=cds-WP_032700848.1;Parent=gene-PHA56_RS30905;Dbxref=Genbank:WP_032700848.1;Name=WP_032700848.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001198918.1;locus_tag=PHA56_RS30905;product=antirestriction protein;protein_id=WP_032700848.1;transl_table=11 NZ_CP116216.1 RefSeq gene 169240 170025 . - . ID=gene-PHA56_RS30910;Name=PHA56_RS30910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS30910;old_locus_tag=PHA56_30910 NZ_CP116216.1 Protein Homology CDS 169240 170025 . - 0 ID=cds-WP_032700849.1;Parent=gene-PHA56_RS30910;Dbxref=Genbank:WP_032700849.1;Name=WP_032700849.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009654051.1;locus_tag=PHA56_RS30910;product=hypothetical protein;protein_id=WP_032700849.1;transl_table=11 NZ_CP116216.1 RefSeq gene 170079 170498 . - . ID=gene-PHA56_RS30915;Name=PHA56_RS30915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS30915;old_locus_tag=PHA56_30915 NZ_CP116216.1 Protein Homology CDS 170079 170498 . - 0 ID=cds-WP_032700850.1;Parent=gene-PHA56_RS30915;Dbxref=Genbank:WP_032700850.1;Name=WP_032700850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001568043.1;locus_tag=PHA56_RS30915;product=DUF1380 family protein;protein_id=WP_032700850.1;transl_table=11 NZ_CP116216.1 RefSeq gene 170510 170731 . - . ID=gene-PHA56_RS30920;Name=PHA56_RS30920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS30920;old_locus_tag=PHA56_30920 NZ_CP116216.1 Protein Homology CDS 170510 170731 . - 0 ID=cds-WP_032700851.1;Parent=gene-PHA56_RS30920;Dbxref=Genbank:WP_032700851.1;Name=WP_032700851.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_958723.1;locus_tag=PHA56_RS30920;product=hypothetical protein;protein_id=WP_032700851.1;transl_table=11 NZ_CP116216.1 RefSeq gene 170731 171411 . - . ID=gene-PHA56_RS30925;Name=PHA56_RS30925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS30925;old_locus_tag=PHA56_30925 NZ_CP116216.1 Protein Homology CDS 170731 171411 . - 0 ID=cds-WP_032700852.1;Parent=gene-PHA56_RS30925;Dbxref=Genbank:WP_032700852.1;Name=WP_032700852.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490548.1;locus_tag=PHA56_RS30925;product=DNA methylase;protein_id=WP_032700852.1;transl_table=11 NZ_CP116216.1 RefSeq pseudogene 171789 172068 . - . ID=gene-PHA56_RS30930;Name=PHA56_RS30930;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS30930;old_locus_tag=PHA56_30930;pseudo=true NZ_CP116216.1 Protein Homology CDS 171789 172068 . - 0 ID=cds-PHA56_RS30930;Parent=gene-PHA56_RS30930;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194745.1;locus_tag=PHA56_RS30930;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP116216.1 RefSeq gene 172386 172616 . - . ID=gene-PHA56_RS30935;Name=PHA56_RS30935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS30935;old_locus_tag=PHA56_30935 NZ_CP116216.1 Protein Homology CDS 172386 172616 . - 0 ID=cds-WP_047665741.1;Parent=gene-PHA56_RS30935;Dbxref=Genbank:WP_047665741.1;Name=WP_047665741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229766.1;locus_tag=PHA56_RS30935;product=hypothetical protein;protein_id=WP_047665741.1;transl_table=11 NZ_CP116216.1 RefSeq gene 172680 173351 . - . ID=gene-PHA56_RS30940;Name=PHA56_RS30940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS30940;old_locus_tag=PHA56_30940 NZ_CP116216.1 Protein Homology CDS 172680 173351 . - 0 ID=cds-WP_032700854.1;Parent=gene-PHA56_RS30940;Dbxref=Genbank:WP_032700854.1;Name=WP_032700854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229767.1;locus_tag=PHA56_RS30940;product=plasmid partitioning/stability family protein;protein_id=WP_032700854.1;transl_table=11 NZ_CP116216.1 RefSeq gene 173354 174325 . - . ID=gene-PHA56_RS30945;Name=parM;gbkey=Gene;gene=parM;gene_biotype=protein_coding;locus_tag=PHA56_RS30945;old_locus_tag=PHA56_30945 NZ_CP116216.1 Protein Homology CDS 173354 174325 . - 0 ID=cds-WP_077255421.1;Parent=gene-PHA56_RS30945;Dbxref=Genbank:WP_077255421.1;Name=WP_077255421.1;gbkey=CDS;gene=parM;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229768.1;locus_tag=PHA56_RS30945;product=plasmid segregation protein ParM;protein_id=WP_077255421.1;transl_table=11 NZ_CP116216.1 RefSeq gene 174544 174987 . + . ID=gene-PHA56_RS30950;Name=umuD;gbkey=Gene;gene=umuD;gene_biotype=protein_coding;locus_tag=PHA56_RS30950;old_locus_tag=PHA56_30950 NZ_CP116216.1 Protein Homology CDS 174544 174987 . + 0 ID=cds-WP_040118420.1;Parent=gene-PHA56_RS30950;Dbxref=Genbank:WP_040118420.1;Name=WP_040118420.1;Ontology_term=GO:0003677;gbkey=CDS;gene=umuD;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229772.1;locus_tag=PHA56_RS30950;product=translesion error-prone DNA polymerase V autoproteolytic subunit;protein_id=WP_040118420.1;transl_table=11 NZ_CP116216.1 RefSeq gene 174987 176255 . + . ID=gene-PHA56_RS30955;Name=PHA56_RS30955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS30955;old_locus_tag=PHA56_30955 NZ_CP116216.1 Protein Homology CDS 174987 176255 . + 0 ID=cds-WP_032752101.1;Parent=gene-PHA56_RS30955;Dbxref=Genbank:WP_032752101.1;Name=WP_032752101.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004152715.1;locus_tag=PHA56_RS30955;product=Y-family DNA polymerase;protein_id=WP_032752101.1;transl_table=11 NZ_CP116216.1 RefSeq gene 176420 176671 . + . ID=gene-PHA56_RS30960;Name=PHA56_RS30960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS30960;old_locus_tag=PHA56_30960 NZ_CP116216.1 Protein Homology CDS 176420 176671 . + 0 ID=cds-WP_032752108.1;Parent=gene-PHA56_RS30960;Dbxref=Genbank:WP_032752108.1;Name=WP_032752108.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001595120.1;locus_tag=PHA56_RS30960;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=WP_032752108.1;transl_table=11 NZ_CP116216.1 RefSeq gene 176668 176955 . + . ID=gene-PHA56_RS30965;Name=PHA56_RS30965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS30965;old_locus_tag=PHA56_30965 NZ_CP116216.1 Protein Homology CDS 176668 176955 . + 0 ID=cds-WP_032693963.1;Parent=gene-PHA56_RS30965;Dbxref=Genbank:WP_032693963.1;Name=WP_032693963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020317119.1;locus_tag=PHA56_RS30965;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_032693963.1;transl_table=11 NZ_CP116216.1 RefSeq gene 177555 178756 . + . ID=gene-PHA56_RS30970;Name=PHA56_RS30970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS30970;old_locus_tag=PHA56_30970 NZ_CP116216.1 Protein Homology CDS 177555 177870 . + 0 ID=cds-WP_096913407.1-5;Parent=gene-PHA56_RS30970;Dbxref=Genbank:WP_096913407.1;Name=WP_096913407.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558215.1;locus_tag=PHA56_RS30970;product=IS3 family transposase;protein_id=WP_096913407.1;transl_table=11 NZ_CP116216.1 Protein Homology CDS 177870 178756 . + 2 ID=cds-WP_096913407.1-5;Parent=gene-PHA56_RS30970;Dbxref=Genbank:WP_096913407.1;Name=WP_096913407.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558215.1;locus_tag=PHA56_RS30970;product=IS3 family transposase;protein_id=WP_096913407.1;transl_table=11 NZ_CP116216.1 RefSeq pseudogene 179383 179655 . + . ID=gene-PHA56_RS30975;Name=PHA56_RS30975;end_range=179655,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS30975;old_locus_tag=PHA56_30975;partial=true;pseudo=true;start_range=.,179383 NZ_CP116216.1 Protein Homology CDS 179383 179655 . + 0 ID=cds-PHA56_RS30975;Parent=gene-PHA56_RS30975;Note=binds processed UmuD protein to form functional DNA pol V (UmuD'2UmuC)%3B involved in translesion polymerization%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=179655,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000457545.1;locus_tag=PHA56_RS30975;partial=true;product=DNA polymerase V subunit UmuC;pseudo=true;start_range=.,179383;transl_table=11 NZ_CP116216.1 RefSeq gene 180321 181292 . - . ID=gene-PHA56_RS30980;Name=PHA56_RS30980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS30980;old_locus_tag=PHA56_30980 NZ_CP116216.1 Protein Homology CDS 180321 181292 . - 0 ID=cds-WP_032752114.1;Parent=gene-PHA56_RS30980;Dbxref=Genbank:WP_032752114.1;Name=WP_032752114.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052641.1;locus_tag=PHA56_RS30980;product=ParB/RepB/Spo0J family plasmid partition protein;protein_id=WP_032752114.1;transl_table=11 NZ_CP116216.1 RefSeq gene 181292 182458 . - . ID=gene-PHA56_RS30985;Name=sopA;gbkey=Gene;gene=sopA;gene_biotype=protein_coding;locus_tag=PHA56_RS30985;old_locus_tag=PHA56_30985 NZ_CP116216.1 Protein Homology CDS 181292 182458 . - 0 ID=cds-WP_032752115.1;Parent=gene-PHA56_RS30985;Dbxref=Genbank:WP_032752115.1;Name=WP_032752115.1;gbkey=CDS;gene=sopA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052640.1;locus_tag=PHA56_RS30985;product=plasmid-partitioning protein SopA;protein_id=WP_032752115.1;transl_table=11 ##sequence-region NZ_CP116217.1 1 105902 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1134687 NZ_CP116217.1 RefSeq region 1 105902 . + . ID=NZ_CP116217.1:1..105902;Dbxref=taxon:1134687;Is_circular=true;Name=p2562_3;collection-date=2018;country=China: Hangzhou;gbkey=Src;genome=plasmid;isolation-source=sputum;mol_type=genomic DNA;nat-host=Homo sapiens;plasmid-name=p2562_3;strain=2563 NZ_CP116217.1 RefSeq gene 19 894 . + . ID=gene-PHA56_RS30990;Name=PHA56_RS30990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS30990;old_locus_tag=PHA56_30990 NZ_CP116217.1 Protein Homology CDS 19 894 . + 0 ID=cds-WP_004098982.1;Parent=gene-PHA56_RS30990;Dbxref=Genbank:WP_004098982.1;Name=WP_004098982.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004098982.1;locus_tag=PHA56_RS30990;product=replication initiation protein;protein_id=WP_004098982.1;transl_table=11 NZ_CP116217.1 RefSeq gene 1471 2097 . + . ID=gene-PHA56_RS30995;Name=PHA56_RS30995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS30995;old_locus_tag=PHA56_30995 NZ_CP116217.1 Protein Homology CDS 1471 2097 . + 0 ID=cds-WP_016946792.1;Parent=gene-PHA56_RS30995;Dbxref=Genbank:WP_016946792.1;Name=WP_016946792.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010260829.1;locus_tag=PHA56_RS30995;product=ParA family plasmid-partitioning AAA ATPase;protein_id=WP_016946792.1;transl_table=11 NZ_CP116217.1 RefSeq gene 2094 2396 . + . ID=gene-PHA56_RS31000;Name=PHA56_RS31000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31000;old_locus_tag=PHA56_31000 NZ_CP116217.1 Protein Homology CDS 2094 2396 . + 0 ID=cds-WP_004197636.1;Parent=gene-PHA56_RS31000;Dbxref=Genbank:WP_004197636.1;Name=WP_004197636.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001245882.1;locus_tag=PHA56_RS31000;product=hypothetical protein;protein_id=WP_004197636.1;transl_table=11 NZ_CP116217.1 RefSeq gene 2812 3606 . - . ID=gene-PHA56_RS31005;Name=PHA56_RS31005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31005;old_locus_tag=PHA56_31005 NZ_CP116217.1 Protein Homology CDS 2812 3606 . - 0 ID=cds-WP_016240356.1;Parent=gene-PHA56_RS31005;Dbxref=Genbank:WP_016240356.1;Name=WP_016240356.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004197635.1;locus_tag=PHA56_RS31005;product=site-specific integrase;protein_id=WP_016240356.1;transl_table=11 NZ_CP116217.1 RefSeq pseudogene 3804 4819 . - . ID=gene-PHA56_RS31010;Name=PHA56_RS31010;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS31010;old_locus_tag=PHA56_31010;pseudo=true NZ_CP116217.1 Protein Homology CDS 3804 4819 . - 0 ID=cds-PHA56_RS31010;Parent=gene-PHA56_RS31010;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016946794.1;locus_tag=PHA56_RS31010;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP116217.1 RefSeq gene 5013 5318 . - . ID=gene-PHA56_RS31015;Name=ccdB;gbkey=Gene;gene=ccdB;gene_biotype=protein_coding;locus_tag=PHA56_RS31015;old_locus_tag=PHA56_31015 NZ_CP116217.1 Protein Homology CDS 5013 5318 . - 0 ID=cds-WP_006788214.1;Parent=gene-PHA56_RS31015;Dbxref=Genbank:WP_006788214.1;Name=WP_006788214.1;gbkey=CDS;gene=ccdB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052635.1;locus_tag=PHA56_RS31015;product=type II toxin-antitoxin system toxin CcdB;protein_id=WP_006788214.1;transl_table=11 NZ_CP116217.1 RefSeq gene 5320 5538 . - . ID=gene-PHA56_RS31020;Name=ccdA;gbkey=Gene;gene=ccdA;gene_biotype=protein_coding;locus_tag=PHA56_RS31020;old_locus_tag=PHA56_31020 NZ_CP116217.1 Protein Homology CDS 5320 5538 . - 0 ID=cds-WP_006788213.1;Parent=gene-PHA56_RS31020;Dbxref=Genbank:WP_006788213.1;Name=WP_006788213.1;gbkey=CDS;gene=ccdA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858357.1;locus_tag=PHA56_RS31020;product=type II toxin-antitoxin system antitoxin CcdA;protein_id=WP_006788213.1;transl_table=11 NZ_CP116217.1 RefSeq gene 6166 6396 . + . ID=gene-PHA56_RS31025;Name=vapB;gbkey=Gene;gene=vapB;gene_biotype=protein_coding;locus_tag=PHA56_RS31025;old_locus_tag=PHA56_31025 NZ_CP116217.1 Protein Homology CDS 6166 6396 . + 0 ID=cds-WP_021312767.1;Parent=gene-PHA56_RS31025;Dbxref=Genbank:WP_021312767.1;Name=WP_021312767.1;gbkey=CDS;gene=vapB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229629.1;locus_tag=PHA56_RS31025;product=type II toxin-antitoxin system VapB family antitoxin;protein_id=WP_021312767.1;transl_table=11 NZ_CP116217.1 RefSeq gene 6393 6809 . + . ID=gene-PHA56_RS31030;Name=PHA56_RS31030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31030;old_locus_tag=PHA56_31030 NZ_CP116217.1 Protein Homology CDS 6393 6809 . + 0 ID=cds-WP_021312768.1;Parent=gene-PHA56_RS31030;Dbxref=Genbank:WP_021312768.1;Name=WP_021312768.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229630.1;locus_tag=PHA56_RS31030;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_021312768.1;transl_table=11 NZ_CP116217.1 RefSeq gene 6997 7701 . - . ID=gene-PHA56_RS31035;Name=PHA56_RS31035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31035;old_locus_tag=PHA56_31035 NZ_CP116217.1 Protein Homology CDS 6997 7701 . - 0 ID=cds-WP_001067855.1-8;Parent=gene-PHA56_RS31035;Dbxref=Genbank:WP_001067855.1;Name=WP_001067855.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221000.1;locus_tag=PHA56_RS31035;product=IS6-like element IS26 family transposase;protein_id=WP_001067855.1;transl_table=11 NZ_CP116217.1 RefSeq pseudogene 7766 10540 . + . ID=gene-PHA56_RS31040;Name=PHA56_RS31040;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS31040;old_locus_tag=PHA56_31040;partial=true;pseudo=true;start_range=.,7766 NZ_CP116217.1 Protein Homology CDS 7766 10540 . + 0 ID=cds-PHA56_RS31040;Parent=gene-PHA56_RS31040;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012817690.1;locus_tag=PHA56_RS31040;partial=true;product=Tn3 family transposase;pseudo=true;start_range=.,7766;transl_table=11 NZ_CP116217.1 RefSeq gene 10748 11716 . - . ID=gene-PHA56_RS31045;Name=PHA56_RS31045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31045;old_locus_tag=PHA56_31045 NZ_CP116217.1 Protein Homology CDS 10748 11716 . - 0 ID=cds-WP_077255425.1;Parent=gene-PHA56_RS31045;Dbxref=Genbank:WP_077255425.1;Name=WP_077255425.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1;locus_tag=PHA56_RS31045;product=IS5-like element IS903B family transposase;protein_id=WP_077255425.1;transl_table=11 NZ_CP116217.1 RefSeq gene 11951 12976 . + . ID=gene-PHA56_RS31050;Name=PHA56_RS31050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31050;old_locus_tag=PHA56_31050 NZ_CP116217.1 Protein Homology CDS 11951 12976 . + 0 ID=cds-WP_040118421.1-6;Parent=gene-PHA56_RS31050;Dbxref=Genbank:WP_040118421.1;Name=WP_040118421.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011144720.1;locus_tag=PHA56_RS31050;product=IS630 family transposase;protein_id=WP_040118421.1;transl_table=11 NZ_CP116217.1 RefSeq gene 13589 14614 . - . ID=gene-PHA56_RS31055;Name=PHA56_RS31055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31055;old_locus_tag=PHA56_31055 NZ_CP116217.1 Protein Homology CDS 13589 14614 . - 0 ID=cds-WP_040118421.1-7;Parent=gene-PHA56_RS31055;Dbxref=Genbank:WP_040118421.1;Name=WP_040118421.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011144720.1;locus_tag=PHA56_RS31055;product=IS630 family transposase;protein_id=WP_040118421.1;transl_table=11 NZ_CP116217.1 RefSeq gene 14663 15247 . - . ID=gene-PHA56_RS31060;Name=PHA56_RS31060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31060;old_locus_tag=PHA56_31060 NZ_CP116217.1 GeneMarkS-2+ CDS 14663 15247 . - 0 ID=cds-WP_040118526.1;Parent=gene-PHA56_RS31060;Dbxref=Genbank:WP_040118526.1;Name=WP_040118526.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PHA56_RS31060;product=hypothetical protein;protein_id=WP_040118526.1;transl_table=11 NZ_CP116217.1 RefSeq pseudogene 15379 15651 . - . ID=gene-PHA56_RS31065;Name=PHA56_RS31065;end_range=15651,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS31065;old_locus_tag=PHA56_31065;partial=true;pseudo=true NZ_CP116217.1 Protein Homology CDS 15379 15651 . - 0 ID=cds-PHA56_RS31065;Parent=gene-PHA56_RS31065;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=15651,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=PHA56_RS31065;partial=true;product=IS1 family transposase;pseudo=true;transl_table=11 NZ_CP116217.1 RefSeq gene 15750 17183 . + . ID=gene-PHA56_RS31070;Name=PHA56_RS31070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31070;old_locus_tag=PHA56_31070 NZ_CP116217.1 Protein Homology CDS 15750 17183 . + 0 ID=cds-WP_001288432.1;Parent=gene-PHA56_RS31070;Dbxref=Genbank:WP_001288432.1;Name=WP_001288432.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001288433.1;locus_tag=PHA56_RS31070;product=DNA cytosine methyltransferase;protein_id=WP_001288432.1;transl_table=11 NZ_CP116217.1 RefSeq gene 17217 18431 . - . ID=gene-PHA56_RS31075;Name=PHA56_RS31075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31075;old_locus_tag=PHA56_31075 NZ_CP116217.1 Protein Homology CDS 17217 18431 . - 0 ID=cds-WP_005012528.1;Parent=gene-PHA56_RS31075;Dbxref=Genbank:WP_005012528.1;Name=WP_005012528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_143212653.1;locus_tag=PHA56_RS31075;product=type II site-specific deoxyribonuclease;protein_id=WP_005012528.1;transl_table=11 NZ_CP116217.1 RefSeq pseudogene 18543 18851 . + . ID=gene-PHA56_RS31080;Name=PHA56_RS31080;end_range=18851,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS31080;old_locus_tag=PHA56_31080;partial=true;pseudo=true NZ_CP116217.1 Protein Homology CDS 18543 18851 . + 0 ID=cds-PHA56_RS31080;Parent=gene-PHA56_RS31080;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=18851,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221000.1;locus_tag=PHA56_RS31080;partial=true;product=IS6-like element IS26 family transposase;pseudo=true;transl_table=11 NZ_CP116217.1 RefSeq gene 18906 19610 . - . ID=gene-PHA56_RS31085;Name=PHA56_RS31085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31085;old_locus_tag=PHA56_31085 NZ_CP116217.1 Protein Homology CDS 18906 19610 . - 0 ID=cds-WP_001067855.1-9;Parent=gene-PHA56_RS31085;Dbxref=Genbank:WP_001067855.1;Name=WP_001067855.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221000.1;locus_tag=PHA56_RS31085;product=IS6-like element IS26 family transposase;protein_id=WP_001067855.1;transl_table=11 NZ_CP116217.1 RefSeq pseudogene 19673 20581 . + . ID=gene-PHA56_RS31090;Name=PHA56_RS31090;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS31090;old_locus_tag=PHA56_31090;partial=true;pseudo=true;start_range=.,19673 NZ_CP116217.1 Protein Homology CDS 19673 20581 . + 0 ID=cds-PHA56_RS31090;Parent=gene-PHA56_RS31090;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0003824,GO:0030976;gbkey=CDS;go_function=catalytic activity|0003824||IEA,thiamine pyrophosphate binding|0030976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001012636.1;locus_tag=PHA56_RS31090;partial=true;product=thiamine pyrophosphate-dependent enzyme;pseudo=true;start_range=.,19673;transl_table=11 NZ_CP116217.1 RefSeq gene 20578 20844 . + . ID=gene-PHA56_RS31095;Name=ilvM;gbkey=Gene;gene=ilvM;gene_biotype=protein_coding;locus_tag=PHA56_RS31095;old_locus_tag=PHA56_31095 NZ_CP116217.1 Protein Homology CDS 20578 20844 . + 0 ID=cds-WP_040118523.1;Parent=gene-PHA56_RS31095;Dbxref=Genbank:WP_040118523.1;Name=WP_040118523.1;gbkey=CDS;gene=ilvM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312730.1;locus_tag=PHA56_RS31095;product=acetolactate synthase 2 small subunit;protein_id=WP_040118523.1;transl_table=11 NZ_CP116217.1 RefSeq gene 20862 21791 . + . ID=gene-PHA56_RS31100;Name=PHA56_RS31100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31100;old_locus_tag=PHA56_31100 NZ_CP116217.1 Protein Homology CDS 20862 21791 . + 0 ID=cds-WP_040118522.1;Parent=gene-PHA56_RS31100;Dbxref=Genbank:WP_040118522.1;Name=WP_040118522.1;Ontology_term=GO:0009081,GO:0004084;gbkey=CDS;go_function=branched-chain-amino-acid transaminase activity|0004084||IEA;go_process=branched-chain amino acid metabolic process|0009081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312731.1;locus_tag=PHA56_RS31100;product=branched-chain amino acid transaminase;protein_id=WP_040118522.1;transl_table=11 NZ_CP116217.1 RefSeq gene 21855 23705 . + . ID=gene-PHA56_RS31105;Name=ilvD;gbkey=Gene;gene=ilvD;gene_biotype=protein_coding;locus_tag=PHA56_RS31105;old_locus_tag=PHA56_31105 NZ_CP116217.1 Protein Homology CDS 21855 23705 . + 0 ID=cds-WP_040118521.1;Parent=gene-PHA56_RS31105;Dbxref=Genbank:WP_040118521.1;Name=WP_040118521.1;Ontology_term=GO:0009082,GO:0004160;gbkey=CDS;gene=ilvD;go_function=dihydroxy-acid dehydratase activity|0004160||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133366.1;locus_tag=PHA56_RS31105;product=dihydroxy-acid dehydratase;protein_id=WP_040118521.1;transl_table=11 NZ_CP116217.1 RefSeq gene 23711 25255 . + . ID=gene-PHA56_RS31110;Name=ilvA;gbkey=Gene;gene=ilvA;gene_biotype=protein_coding;locus_tag=PHA56_RS31110;old_locus_tag=PHA56_31110 NZ_CP116217.1 Protein Homology CDS 23711 25255 . + 0 ID=cds-WP_020323225.1;Parent=gene-PHA56_RS31110;Dbxref=Genbank:WP_020323225.1;Name=WP_020323225.1;Ontology_term=GO:0009097,GO:0004794;gbkey=CDS;gene=ilvA;go_function=L-threonine ammonia-lyase activity|0004794||IEA;go_process=isoleucine biosynthetic process|0009097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312733.1;locus_tag=PHA56_RS31110;product=threonine ammonia-lyase%2C biosynthetic;protein_id=WP_020323225.1;transl_table=11 NZ_CP116217.1 RefSeq gene 25508 26017 . + . ID=gene-PHA56_RS31115;Name=PHA56_RS31115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31115;old_locus_tag=PHA56_31115 NZ_CP116217.1 Protein Homology CDS 25508 26017 . + 0 ID=cds-WP_223226985.1;Parent=gene-PHA56_RS31115;Dbxref=Genbank:WP_223226985.1;Name=WP_223226985.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013368207.1;locus_tag=PHA56_RS31115;product=PTS sugar transporter subunit IIA;protein_id=WP_223226985.1;transl_table=11 NZ_CP116217.1 RefSeq gene 26019 26297 . + . ID=gene-PHA56_RS31120;Name=PHA56_RS31120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31120;old_locus_tag=PHA56_31120 NZ_CP116217.1 Protein Homology CDS 26019 26297 . + 0 ID=cds-WP_020323230.1;Parent=gene-PHA56_RS31120;Dbxref=Genbank:WP_020323230.1;Name=WP_020323230.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020323230.1;locus_tag=PHA56_RS31120;product=PTS sugar transporter subunit IIB;protein_id=WP_020323230.1;transl_table=11 NZ_CP116217.1 RefSeq gene 26343 27746 . + . ID=gene-PHA56_RS31125;Name=PHA56_RS31125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31125;old_locus_tag=PHA56_31125 NZ_CP116217.1 Protein Homology CDS 26343 27746 . + 0 ID=cds-WP_020323222.1;Parent=gene-PHA56_RS31125;Dbxref=Genbank:WP_020323222.1;Name=WP_020323222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013368205.1;locus_tag=PHA56_RS31125;product=PTS sugar permease component;protein_id=WP_020323222.1;transl_table=11 NZ_CP116217.1 RefSeq gene 27815 29878 . + . ID=gene-PHA56_RS31130;Name=PHA56_RS31130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31130;old_locus_tag=PHA56_31130 NZ_CP116217.1 Protein Homology CDS 27815 29878 . + 0 ID=cds-WP_020323221.1;Parent=gene-PHA56_RS31130;Dbxref=Genbank:WP_020323221.1;Name=WP_020323221.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013368204.1;locus_tag=PHA56_RS31130;product=BglG family transcription antiterminator;protein_id=WP_020323221.1;transl_table=11 NZ_CP116217.1 RefSeq gene 29981 30643 . + . ID=gene-PHA56_RS31135;Name=PHA56_RS31135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31135;old_locus_tag=PHA56_31135 NZ_CP116217.1 Protein Homology CDS 29981 30643 . + 0 ID=cds-WP_009654927.1;Parent=gene-PHA56_RS31135;Dbxref=Genbank:WP_009654927.1;Name=WP_009654927.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009654927.1;locus_tag=PHA56_RS31135;product=class II aldolase/adducin family protein;protein_id=WP_009654927.1;transl_table=11 NZ_CP116217.1 RefSeq gene 30689 31702 . + . ID=gene-PHA56_RS31140;Name=PHA56_RS31140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31140;old_locus_tag=PHA56_31140 NZ_CP116217.1 Protein Homology CDS 30689 31702 . + 0 ID=cds-WP_009654928.1;Parent=gene-PHA56_RS31140;Dbxref=Genbank:WP_009654928.1;Name=WP_009654928.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009654928.1;locus_tag=PHA56_RS31140;product=dihydroxyacetone kinase subunit DhaK;protein_id=WP_009654928.1;transl_table=11 NZ_CP116217.1 RefSeq gene 31712 32353 . + . ID=gene-PHA56_RS31145;Name=PHA56_RS31145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31145;old_locus_tag=PHA56_31145 NZ_CP116217.1 Protein Homology CDS 31712 32353 . + 0 ID=cds-WP_009654926.1;Parent=gene-PHA56_RS31145;Dbxref=Genbank:WP_009654926.1;Name=WP_009654926.1;Ontology_term=GO:0006071,GO:0004371;gbkey=CDS;go_function=glycerone kinase activity|0004371||IEA;go_process=glycerol metabolic process|0006071||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009654926.1;locus_tag=PHA56_RS31145;product=DAK2 domain-containing protein;protein_id=WP_009654926.1;transl_table=11 NZ_CP116217.1 RefSeq gene 32369 32635 . + . ID=gene-PHA56_RS31150;Name=PHA56_RS31150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31150;old_locus_tag=PHA56_31150 NZ_CP116217.1 Protein Homology CDS 32369 32635 . + 0 ID=cds-WP_009654924.1;Parent=gene-PHA56_RS31150;Dbxref=Genbank:WP_009654924.1;Name=WP_009654924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009654924.1;locus_tag=PHA56_RS31150;product=HPr family phosphocarrier protein;protein_id=WP_009654924.1;transl_table=11 NZ_CP116217.1 RefSeq gene 32769 33962 . - . ID=gene-PHA56_RS31155;Name=PHA56_RS31155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31155;old_locus_tag=PHA56_31155 NZ_CP116217.1 Protein Homology CDS 32769 33962 . - 0 ID=cds-WP_032449369.1;Parent=gene-PHA56_RS31155;Dbxref=Genbank:WP_032449369.1;Name=WP_032449369.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015871146.1;locus_tag=PHA56_RS31155;product=trans-2-enoyl-CoA reductase family protein;protein_id=WP_032449369.1;transl_table=11 NZ_CP116217.1 RefSeq gene 34180 34809 . - . ID=gene-PHA56_RS31160;Name=dhaL;gbkey=Gene;gene=dhaL;gene_biotype=protein_coding;locus_tag=PHA56_RS31160;old_locus_tag=PHA56_31160 NZ_CP116217.1 Protein Homology CDS 34180 34809 . - 0 ID=cds-WP_009654921.1;Parent=gene-PHA56_RS31160;Dbxref=Genbank:WP_009654921.1;Name=WP_009654921.1;Ontology_term=GO:0006071,GO:0004371;gbkey=CDS;gene=dhaL;go_function=glycerone kinase activity|0004371||IEA;go_process=glycerol metabolic process|0006071||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009654921.1;locus_tag=PHA56_RS31160;product=dihydroxyacetone kinase subunit DhaL;protein_id=WP_009654921.1;transl_table=11 NZ_CP116217.1 RefSeq gene 34811 35815 . - . ID=gene-PHA56_RS31165;Name=PHA56_RS31165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31165;old_locus_tag=PHA56_31165 NZ_CP116217.1 Protein Homology CDS 34811 35815 . - 0 ID=cds-WP_009654925.1;Parent=gene-PHA56_RS31165;Dbxref=Genbank:WP_009654925.1;Name=WP_009654925.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009654925.1;locus_tag=PHA56_RS31165;product=dihydroxyacetone kinase subunit DhaK;protein_id=WP_009654925.1;transl_table=11 NZ_CP116217.1 RefSeq gene 35936 36838 . - . ID=gene-PHA56_RS31170;Name=ilvY;gbkey=Gene;gene=ilvY;gene_biotype=protein_coding;locus_tag=PHA56_RS31170;old_locus_tag=PHA56_31170 NZ_CP116217.1 Protein Homology CDS 35936 36838 . - 0 ID=cds-WP_009654922.1;Parent=gene-PHA56_RS31170;Dbxref=Genbank:WP_009654922.1;Name=WP_009654922.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ilvY;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016155102.1;locus_tag=PHA56_RS31170;product=HTH-type transcriptional activator IlvY;protein_id=WP_009654922.1;transl_table=11 NZ_CP116217.1 RefSeq gene 37114 38589 . + . ID=gene-PHA56_RS31175;Name=ilvC;gbkey=Gene;gene=ilvC;gene_biotype=protein_coding;locus_tag=PHA56_RS31175;old_locus_tag=PHA56_31175 NZ_CP116217.1 Protein Homology CDS 37114 38589 . + 0 ID=cds-WP_020323220.1;Parent=gene-PHA56_RS31175;Dbxref=Genbank:WP_020323220.1;Name=WP_020323220.1;Ontology_term=GO:0009082,GO:0004455;gbkey=CDS;gene=ilvC;go_function=ketol-acid reductoisomerase activity|0004455||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133363.1;locus_tag=PHA56_RS31175;product=ketol-acid reductoisomerase;protein_id=WP_020323220.1;transl_table=11 NZ_CP116217.1 RefSeq gene 38666 38947 . - . ID=gene-PHA56_RS31180;Name=ppiC;gbkey=Gene;gene=ppiC;gene_biotype=protein_coding;locus_tag=PHA56_RS31180;old_locus_tag=PHA56_31180 NZ_CP116217.1 Protein Homology CDS 38666 38947 . - 0 ID=cds-WP_004886861.1;Parent=gene-PHA56_RS31180;Dbxref=Genbank:WP_004886861.1;Name=WP_004886861.1;gbkey=CDS;gene=ppiC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224421.1;locus_tag=PHA56_RS31180;product=peptidylprolyl isomerase PpiC;protein_id=WP_004886861.1;transl_table=11 NZ_CP116217.1 RefSeq gene 39005 39643 . - . ID=gene-PHA56_RS31185;Name=PHA56_RS31185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31185;old_locus_tag=PHA56_31185 NZ_CP116217.1 Protein Homology CDS 39005 39643 . - 0 ID=cds-WP_223178553.1;Parent=gene-PHA56_RS31185;Dbxref=Genbank:WP_223178553.1;Name=WP_223178553.1;Ontology_term=GO:0046373,GO:0046556;gbkey=CDS;go_function=alpha-L-arabinofuranosidase activity|0046556||IEA;go_process=L-arabinose metabolic process|0046373||IEA;inference=COORDINATES: protein motif:HMM:NF018647.2;locus_tag=PHA56_RS31185;product=alpha-L-arabinofuranosidase C-terminal domain-containing protein;protein_id=WP_223178553.1;transl_table=11 NZ_CP116217.1 RefSeq gene 39707 40411 . - . ID=gene-PHA56_RS31190;Name=PHA56_RS31190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31190;old_locus_tag=PHA56_31190 NZ_CP116217.1 Protein Homology CDS 39707 40411 . - 0 ID=cds-WP_001067855.1-10;Parent=gene-PHA56_RS31190;Dbxref=Genbank:WP_001067855.1;Name=WP_001067855.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221000.1;locus_tag=PHA56_RS31190;product=IS6-like element IS26 family transposase;protein_id=WP_001067855.1;transl_table=11 NZ_CP116217.1 RefSeq pseudogene 40474 40602 . - . ID=gene-PHA56_RS31195;Name=PHA56_RS31195;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS31195;old_locus_tag=PHA56_31195;partial=true;pseudo=true;start_range=.,40474 NZ_CP116217.1 Protein Homology CDS 40474 40602 . - 0 ID=cds-PHA56_RS31195;Parent=gene-PHA56_RS31195;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_042893601.1;locus_tag=PHA56_RS31195;partial=true;product=IS6 family transposase;pseudo=true;start_range=.,40474;transl_table=11 NZ_CP116217.1 RefSeq gene 40614 41045 . - . ID=gene-PHA56_RS31200;Name=PHA56_RS31200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31200;old_locus_tag=PHA56_31200 NZ_CP116217.1 Protein Homology CDS 40614 41045 . - 0 ID=cds-WP_051800691.1;Parent=gene-PHA56_RS31200;Dbxref=Genbank:WP_051800691.1;Name=WP_051800691.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018024.2;locus_tag=PHA56_RS31200;product=DUF1028 domain-containing protein;protein_id=WP_051800691.1;transl_table=11 NZ_CP116217.1 RefSeq gene 41206 42765 . + . ID=gene-PHA56_RS31205;Name=PHA56_RS31205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31205;old_locus_tag=PHA56_31205 NZ_CP116217.1 Protein Homology CDS 41206 42765 . + 0 ID=cds-WP_040118519.1;Parent=gene-PHA56_RS31205;Dbxref=Genbank:WP_040118519.1;Name=WP_040118519.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008912358.1;locus_tag=PHA56_RS31205;product=ABC transporter substrate-binding protein;protein_id=WP_040118519.1;transl_table=11 NZ_CP116217.1 RefSeq gene 42784 43731 . + . ID=gene-PHA56_RS31210;Name=PHA56_RS31210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31210;old_locus_tag=PHA56_31210 NZ_CP116217.1 Protein Homology CDS 42784 43731 . + 0 ID=cds-WP_040118537.1;Parent=gene-PHA56_RS31210;Dbxref=Genbank:WP_040118537.1;Name=WP_040118537.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004917386.1;locus_tag=PHA56_RS31210;product=ABC transporter permease;protein_id=WP_040118537.1;transl_table=11 NZ_CP116217.1 RefSeq gene 43728 45545 . + . ID=gene-PHA56_RS31215;Name=PHA56_RS31215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31215;old_locus_tag=PHA56_31215 NZ_CP116217.1 Protein Homology CDS 43728 45545 . + 0 ID=cds-WP_040118518.1;Parent=gene-PHA56_RS31215;Dbxref=Genbank:WP_040118518.1;Name=WP_040118518.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004259247.1;locus_tag=PHA56_RS31215;product=dipeptide/oligopeptide/nickel ABC transporter permease/ATP-binding protein;protein_id=WP_040118518.1;transl_table=11 NZ_CP116217.1 RefSeq gene 45542 46354 . + . ID=gene-PHA56_RS31220;Name=PHA56_RS31220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31220;old_locus_tag=PHA56_31220 NZ_CP116217.1 Protein Homology CDS 45542 46354 . + 0 ID=cds-WP_040118517.1;Parent=gene-PHA56_RS31220;Dbxref=Genbank:WP_040118517.1;Name=WP_040118517.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004259244.1;locus_tag=PHA56_RS31220;product=ATP-binding cassette domain-containing protein;protein_id=WP_040118517.1;transl_table=11 NZ_CP116217.1 RefSeq gene 46363 47133 . + . ID=gene-PHA56_RS31225;Name=PHA56_RS31225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31225;old_locus_tag=PHA56_31225 NZ_CP116217.1 Protein Homology CDS 46363 47133 . + 0 ID=cds-WP_040118516.1;Parent=gene-PHA56_RS31225;Dbxref=Genbank:WP_040118516.1;Name=WP_040118516.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008912362.1;locus_tag=PHA56_RS31225;product=GntR family transcriptional regulator;protein_id=WP_040118516.1;transl_table=11 NZ_CP116217.1 RefSeq gene 47139 48188 . + . ID=gene-PHA56_RS31230;Name=PHA56_RS31230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31230;old_locus_tag=PHA56_31230 NZ_CP116217.1 Protein Homology CDS 47139 48188 . + 0 ID=cds-WP_040118515.1;Parent=gene-PHA56_RS31230;Dbxref=Genbank:WP_040118515.1;Name=WP_040118515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014657402.1;locus_tag=PHA56_RS31230;product=osmoprotectant NAGGN system M42 family peptidase;protein_id=WP_040118515.1;transl_table=11 NZ_CP116217.1 RefSeq gene 48237 48518 . - . ID=gene-PHA56_RS31235;Name=PHA56_RS31235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31235;old_locus_tag=PHA56_31235 NZ_CP116217.1 Protein Homology CDS 48237 48518 . - 0 ID=cds-WP_040118536.1;Parent=gene-PHA56_RS31235;Dbxref=Genbank:WP_040118536.1;Name=WP_040118536.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416274.1;locus_tag=PHA56_RS31235;product=DUF1496 domain-containing protein;protein_id=WP_040118536.1;transl_table=11 NZ_CP116217.1 RefSeq pseudogene 48448 48801 . - . ID=gene-PHA56_RS31240;Name=PHA56_RS31240;end_range=48801,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS31240;old_locus_tag=PHA56_31240;partial=true;pseudo=true NZ_CP116217.1 Protein Homology CDS 48448 48801 . - 0 ID=cds-PHA56_RS31240;Parent=gene-PHA56_RS31240;Note=decatenates replicating daughter chromosomes%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=48801,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006684866.1;locus_tag=PHA56_RS31240;partial=true;product=DNA topoisomerase III;pseudo=true;transl_table=11 NZ_CP116217.1 RefSeq gene 48855 49559 . - . ID=gene-PHA56_RS31245;Name=PHA56_RS31245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31245;old_locus_tag=PHA56_31245 NZ_CP116217.1 Protein Homology CDS 48855 49559 . - 0 ID=cds-WP_001067855.1-11;Parent=gene-PHA56_RS31245;Dbxref=Genbank:WP_001067855.1;Name=WP_001067855.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221000.1;locus_tag=PHA56_RS31245;product=IS6-like element IS26 family transposase;protein_id=WP_001067855.1;transl_table=11 NZ_CP116217.1 RefSeq pseudogene 49624 49803 . - . ID=gene-PHA56_RS31250;Name=PHA56_RS31250;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS31250;old_locus_tag=PHA56_31250;partial=true;pseudo=true;start_range=.,49624 NZ_CP116217.1 Protein Homology CDS 49624 49803 . - 0 ID=cds-PHA56_RS31250;Parent=gene-PHA56_RS31250;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001549890.1;locus_tag=PHA56_RS31250;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;start_range=.,49624;transl_table=11 NZ_CP116217.1 RefSeq gene 50110 50814 . + . ID=gene-PHA56_RS31255;Name=PHA56_RS31255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31255;old_locus_tag=PHA56_31255 NZ_CP116217.1 Protein Homology CDS 50110 50814 . + 0 ID=cds-WP_001067855.1-12;Parent=gene-PHA56_RS31255;Dbxref=Genbank:WP_001067855.1;Name=WP_001067855.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221000.1;locus_tag=PHA56_RS31255;product=IS6-like element IS26 family transposase;protein_id=WP_001067855.1;transl_table=11 NZ_CP116217.1 RefSeq pseudogene 50868 51812 . + . ID=gene-PHA56_RS31260;Name=PHA56_RS31260;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS31260;old_locus_tag=PHA56_31260;partial=true;pseudo=true;start_range=.,50868 NZ_CP116217.1 Protein Homology CDS 50868 51812 . + 0 ID=cds-PHA56_RS31260;Parent=gene-PHA56_RS31260;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003291768.1;locus_tag=PHA56_RS31260;partial=true;product=helicase;pseudo=true;start_range=.,50868;transl_table=11 NZ_CP116217.1 RefSeq pseudogene 52142 52321 . - . ID=gene-PHA56_RS31265;Name=PHA56_RS31265;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS31265;old_locus_tag=PHA56_31265;partial=true;pseudo=true;start_range=.,52142 NZ_CP116217.1 Protein Homology CDS 52142 52321 . - 0 ID=cds-PHA56_RS31265;Parent=gene-PHA56_RS31265;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008807719.1;locus_tag=PHA56_RS31265;partial=true;product=SOS response-associated peptidase;pseudo=true;start_range=.,52142;transl_table=11 NZ_CP116217.1 RefSeq gene 53189 53686 . - . ID=gene-PHA56_RS31270;Name=PHA56_RS31270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31270;old_locus_tag=PHA56_31270 NZ_CP116217.1 Protein Homology CDS 53189 53686 . - 0 ID=cds-WP_159041655.1;Parent=gene-PHA56_RS31270;Dbxref=Genbank:WP_159041655.1;Name=WP_159041655.1;Ontology_term=GO:0006276;gbkey=CDS;go_process=plasmid maintenance|0006276||IEA;inference=COORDINATES: protein motif:HMM:NF014444.2;locus_tag=PHA56_RS31270;product=RepA family replication protein;protein_id=WP_159041655.1;transl_table=11 NZ_CP116217.1 RefSeq gene 54395 54646 . - . ID=gene-PHA56_RS31275;Name=PHA56_RS31275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31275;old_locus_tag=PHA56_31275 NZ_CP116217.1 GeneMarkS-2+ CDS 54395 54646 . - 0 ID=cds-WP_064357964.1;Parent=gene-PHA56_RS31275;Dbxref=Genbank:WP_064357964.1;Name=WP_064357964.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PHA56_RS31275;product=hypothetical protein;protein_id=WP_064357964.1;transl_table=11 NZ_CP116217.1 RefSeq gene 54658 55191 . - . ID=gene-PHA56_RS31280;Name=PHA56_RS31280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31280;old_locus_tag=PHA56_31280 NZ_CP116217.1 Protein Homology CDS 54658 55191 . - 0 ID=cds-WP_096807525.1;Parent=gene-PHA56_RS31280;Dbxref=Genbank:WP_096807525.1;Name=WP_096807525.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016193192.1;locus_tag=PHA56_RS31280;product=phospholipase D family protein;protein_id=WP_096807525.1;transl_table=11 NZ_CP116217.1 RefSeq gene 55237 57429 . - . ID=gene-PHA56_RS31285;Name=PHA56_RS31285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31285;old_locus_tag=PHA56_31285 NZ_CP116217.1 Protein Homology CDS 55237 57429 . - 0 ID=cds-WP_064357960.1;Parent=gene-PHA56_RS31285;Dbxref=Genbank:WP_064357960.1;Name=WP_064357960.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017493768.1;locus_tag=PHA56_RS31285;product=F-type conjugative transfer protein TrbC;protein_id=WP_064357960.1;transl_table=11 NZ_CP116217.1 RefSeq gene 57431 58522 . - . ID=gene-PHA56_RS31290;Name=PHA56_RS31290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31290;old_locus_tag=PHA56_31290 NZ_CP116217.1 Protein Homology CDS 57431 58522 . - 0 ID=cds-WP_064357959.1;Parent=gene-PHA56_RS31290;Dbxref=Genbank:WP_064357959.1;Name=WP_064357959.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024498.2;locus_tag=PHA56_RS31290;product=thioredoxin fold domain-containing protein;protein_id=WP_064357959.1;transl_table=11 NZ_CP116217.1 RefSeq gene 58533 59951 . - . ID=gene-PHA56_RS31295;Name=PHA56_RS31295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31295;old_locus_tag=PHA56_31295 NZ_CP116217.1 GeneMarkS-2+ CDS 58533 59951 . - 0 ID=cds-WP_071887238.1;Parent=gene-PHA56_RS31295;Dbxref=Genbank:WP_071887238.1;Name=WP_071887238.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PHA56_RS31295;product=hypothetical protein;protein_id=WP_071887238.1;transl_table=11 NZ_CP116217.1 RefSeq gene 60053 60676 . - . ID=gene-PHA56_RS31300;Name=excA;gbkey=Gene;gene=excA;gene_biotype=protein_coding;locus_tag=PHA56_RS31300;old_locus_tag=PHA56_31300 NZ_CP116217.1 Protein Homology CDS 60053 60676 . - 0 ID=cds-WP_064357957.1;Parent=gene-PHA56_RS31300;Dbxref=Genbank:WP_064357957.1;Name=WP_064357957.1;gbkey=CDS;gene=excA;inference=COORDINATES: protein motif:HMM:NF033891.1;locus_tag=PHA56_RS31300;product=plasmid IncI1-type surface exclusion protein ExcA;protein_id=WP_064357957.1;transl_table=11 NZ_CP116217.1 RefSeq gene 60742 62886 . - . ID=gene-PHA56_RS31305;Name=PHA56_RS31305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31305;old_locus_tag=PHA56_31305 NZ_CP116217.1 Protein Homology CDS 60742 62886 . - 0 ID=cds-WP_064357955.1;Parent=gene-PHA56_RS31305;Dbxref=Genbank:WP_064357955.1;Name=WP_064357955.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004131796.1;locus_tag=PHA56_RS31305;product=DotA/TraY family protein;protein_id=WP_064357955.1;transl_table=11 NZ_CP116217.1 RefSeq gene 62928 63509 . - . ID=gene-PHA56_RS31310;Name=traX;gbkey=Gene;gene=traX;gene_biotype=protein_coding;locus_tag=PHA56_RS31310;old_locus_tag=PHA56_31310 NZ_CP116217.1 Protein Homology CDS 62928 63509 . - 0 ID=cds-WP_064357954.1;Parent=gene-PHA56_RS31310;Dbxref=Genbank:WP_064357954.1;Name=WP_064357954.1;gbkey=CDS;gene=traX;inference=COORDINATES: protein motif:HMM:NF033887.1;locus_tag=PHA56_RS31310;product=conjugal transfer protein TraX;protein_id=WP_064357954.1;transl_table=11 NZ_CP116217.1 RefSeq gene 63506 64702 . - . ID=gene-PHA56_RS31315;Name=traW;gbkey=Gene;gene=traW;gene_biotype=protein_coding;locus_tag=PHA56_RS31315;old_locus_tag=PHA56_31315 NZ_CP116217.1 Protein Homology CDS 63506 64702 . - 0 ID=cds-WP_064357952.1;Parent=gene-PHA56_RS31315;Dbxref=Genbank:WP_064357952.1;Name=WP_064357952.1;gbkey=CDS;gene=traW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017493161.1;locus_tag=PHA56_RS31315;product=conjugal transfer protein TraW;protein_id=WP_064357952.1;transl_table=11 NZ_CP116217.1 RefSeq gene 64712 67759 . - . ID=gene-PHA56_RS31320;Name=PHA56_RS31320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31320;old_locus_tag=PHA56_31320 NZ_CP116217.1 Protein Homology CDS 64712 67759 . - 0 ID=cds-WP_189095616.1;Parent=gene-PHA56_RS31320;Dbxref=Genbank:WP_189095616.1;Name=WP_189095616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019842543.1;locus_tag=PHA56_RS31320;product=ATP-binding protein;protein_id=WP_189095616.1;transl_table=11 NZ_CP116217.1 RefSeq gene 67769 68332 . - . ID=gene-PHA56_RS31325;Name=PHA56_RS31325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31325;old_locus_tag=PHA56_31325 NZ_CP116217.1 GeneMarkS-2+ CDS 67769 68332 . - 0 ID=cds-WP_064357949.1;Parent=gene-PHA56_RS31325;Dbxref=Genbank:WP_064357949.1;Name=WP_064357949.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PHA56_RS31325;product=hypothetical protein;protein_id=WP_064357949.1;transl_table=11 NZ_CP116217.1 RefSeq gene 68376 68777 . - . ID=gene-PHA56_RS31330;Name=PHA56_RS31330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31330;old_locus_tag=PHA56_31330 NZ_CP116217.1 GeneMarkS-2+ CDS 68376 68777 . - 0 ID=cds-WP_032440588.1;Parent=gene-PHA56_RS31330;Dbxref=Genbank:WP_032440588.1;Name=WP_032440588.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PHA56_RS31330;product=hypothetical protein;protein_id=WP_032440588.1;transl_table=11 NZ_CP116217.1 RefSeq gene 68833 69366 . - . ID=gene-PHA56_RS31335;Name=traQ;gbkey=Gene;gene=traQ;gene_biotype=protein_coding;locus_tag=PHA56_RS31335;old_locus_tag=PHA56_31335 NZ_CP116217.1 Protein Homology CDS 68833 69366 . - 0 ID=cds-WP_064357947.1;Parent=gene-PHA56_RS31335;Dbxref=Genbank:WP_064357947.1;Name=WP_064357947.1;gbkey=CDS;gene=traQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004131808.1;locus_tag=PHA56_RS31335;product=conjugal transfer protein TraQ;protein_id=WP_064357947.1;transl_table=11 NZ_CP116217.1 RefSeq gene 69376 70095 . - . ID=gene-PHA56_RS31340;Name=traP;gbkey=Gene;gene=traP;gene_biotype=protein_coding;locus_tag=PHA56_RS31340;old_locus_tag=PHA56_31340 NZ_CP116217.1 Protein Homology CDS 69376 70095 . - 0 ID=cds-WP_064357945.1;Parent=gene-PHA56_RS31340;Dbxref=Genbank:WP_064357945.1;Name=WP_064357945.1;gbkey=CDS;gene=traP;inference=COORDINATES: protein motif:HMM:NF033885.1;locus_tag=PHA56_RS31340;product=conjugal transfer protein TraP;protein_id=WP_064357945.1;transl_table=11 NZ_CP116217.1 RefSeq gene 70102 71430 . - . ID=gene-PHA56_RS31345;Name=traO;gbkey=Gene;gene=traO;gene_biotype=protein_coding;locus_tag=PHA56_RS31345;old_locus_tag=PHA56_31345 NZ_CP116217.1 Protein Homology CDS 70102 71430 . - 0 ID=cds-WP_064357943.1;Parent=gene-PHA56_RS31345;Dbxref=Genbank:WP_064357943.1;Name=WP_064357943.1;gbkey=CDS;gene=traO;inference=COORDINATES: protein motif:HMM:NF033884.1;locus_tag=PHA56_RS31345;product=conjugal transfer protein TraO;protein_id=WP_064357943.1;transl_table=11 NZ_CP116217.1 RefSeq gene 71434 72537 . - . ID=gene-PHA56_RS31350;Name=PHA56_RS31350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31350;old_locus_tag=PHA56_31350 NZ_CP116217.1 Protein Homology CDS 71434 72537 . - 0 ID=cds-WP_081042499.1;Parent=gene-PHA56_RS31350;Dbxref=Genbank:WP_081042499.1;Name=WP_081042499.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017493168.1;locus_tag=PHA56_RS31350;product=DotH/IcmK family type IV secretion protein;protein_id=WP_081042499.1;transl_table=11 NZ_CP116217.1 RefSeq gene 72548 73216 . - . ID=gene-PHA56_RS31355;Name=PHA56_RS31355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31355;old_locus_tag=PHA56_31355 NZ_CP116217.1 Protein Homology CDS 72548 73216 . - 0 ID=cds-WP_196548568.1;Parent=gene-PHA56_RS31355;Dbxref=Genbank:WP_196548568.1;Name=WP_196548568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010214730.1;locus_tag=PHA56_RS31355;product=DotI/IcmL/TraM family protein;protein_id=WP_196548568.1;transl_table=11 NZ_CP116217.1 RefSeq gene 73290 73643 . - . ID=gene-PHA56_RS31360;Name=PHA56_RS31360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31360;old_locus_tag=PHA56_31360 NZ_CP116217.1 Protein Homology CDS 73290 73643 . - 0 ID=cds-WP_064357942.1;Parent=gene-PHA56_RS31360;Dbxref=Genbank:WP_064357942.1;Name=WP_064357942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017493171.1;locus_tag=PHA56_RS31360;product=hypothetical protein;protein_id=WP_064357942.1;transl_table=11 NZ_CP116217.1 RefSeq gene 73677 76892 . - . ID=gene-PHA56_RS31365;Name=PHA56_RS31365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31365;old_locus_tag=PHA56_31365 NZ_CP116217.1 Protein Homology CDS 73677 76892 . - 0 ID=cds-WP_271293008.1;Parent=gene-PHA56_RS31365;Dbxref=Genbank:WP_271293008.1;Name=WP_271293008.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF037421.2;locus_tag=PHA56_RS31365;product=DUF5710 domain-containing protein;protein_id=WP_271293008.1;transl_table=11 NZ_CP116217.1 RefSeq gene 76910 77176 . - . ID=gene-PHA56_RS31370;Name=icmT;gbkey=Gene;gene=icmT;gene_biotype=protein_coding;locus_tag=PHA56_RS31370;old_locus_tag=PHA56_31370 NZ_CP116217.1 Protein Homology CDS 76910 77176 . - 0 ID=cds-WP_189095618.1;Parent=gene-PHA56_RS31370;Dbxref=Genbank:WP_189095618.1;Name=WP_189095618.1;gbkey=CDS;gene=icmT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017493173.1;locus_tag=PHA56_RS31370;product=IcmT/TraK family protein;protein_id=WP_189095618.1;transl_table=11 NZ_CP116217.1 RefSeq gene 77173 78315 . - . ID=gene-PHA56_RS31375;Name=traJ;gbkey=Gene;gene=traJ;gene_biotype=protein_coding;locus_tag=PHA56_RS31375;old_locus_tag=PHA56_31375 NZ_CP116217.1 Protein Homology CDS 77173 78315 . - 0 ID=cds-WP_064357982.1;Parent=gene-PHA56_RS31375;Dbxref=Genbank:WP_064357982.1;Name=WP_064357982.1;gbkey=CDS;gene=traJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017493174.1;locus_tag=PHA56_RS31375;product=plasmid transfer ATPase TraJ;protein_id=WP_064357982.1;transl_table=11 NZ_CP116217.1 RefSeq gene 78338 79156 . - . ID=gene-PHA56_RS31380;Name=PHA56_RS31380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31380;old_locus_tag=PHA56_31380 NZ_CP116217.1 Protein Homology CDS 78338 79156 . - 0 ID=cds-WP_064357938.1;Parent=gene-PHA56_RS31380;Dbxref=Genbank:WP_064357938.1;Name=WP_064357938.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017493175.1;locus_tag=PHA56_RS31380;product=type IV secretory system conjugative DNA transfer family protein;protein_id=WP_064357938.1;transl_table=11 NZ_CP116217.1 RefSeq gene 79153 79617 . - . ID=gene-PHA56_RS31385;Name=PHA56_RS31385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31385;old_locus_tag=PHA56_31385 NZ_CP116217.1 Protein Homology CDS 79153 79617 . - 0 ID=cds-WP_225546581.1;Parent=gene-PHA56_RS31385;Dbxref=Genbank:WP_225546581.1;Name=WP_225546581.1;Note=Members of this family include DotD of type IVB secretion systems and TraH of plasmid conjugative plasmid systems%2C both lipoproteins.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004131837.1;locus_tag=PHA56_RS31385;product=DotD/TraH family lipoprotein;protein_id=WP_225546581.1;transl_table=11 NZ_CP116217.1 RefSeq gene 79643 80122 . - . ID=gene-PHA56_RS31390;Name=PHA56_RS31390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31390;old_locus_tag=PHA56_31390 NZ_CP116217.1 Protein Homology CDS 79643 80122 . - 0 ID=cds-WP_064357937.1;Parent=gene-PHA56_RS31390;Dbxref=Genbank:WP_064357937.1;Name=WP_064357937.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017493177.1;locus_tag=PHA56_RS31390;product=lytic transglycosylase domain-containing protein;protein_id=WP_064357937.1;transl_table=11 NZ_CP116217.1 RefSeq gene 80854 81081 . - . ID=gene-PHA56_RS31395;Name=PHA56_RS31395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31395;old_locus_tag=PHA56_31395 NZ_CP116217.1 GeneMarkS-2+ CDS 80854 81081 . - 0 ID=cds-WP_032440573.1;Parent=gene-PHA56_RS31395;Dbxref=Genbank:WP_032440573.1;Name=WP_032440573.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PHA56_RS31395;product=hypothetical protein;protein_id=WP_032440573.1;transl_table=11 NZ_CP116217.1 RefSeq gene 81691 82533 . + . ID=gene-PHA56_RS31400;Name=PHA56_RS31400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31400;old_locus_tag=PHA56_31400 NZ_CP116217.1 Protein Homology CDS 81691 82533 . + 0 ID=cds-WP_032440572.1;Parent=gene-PHA56_RS31400;Dbxref=Genbank:WP_032440572.1;Name=WP_032440572.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019456106.1;locus_tag=PHA56_RS31400;product=helix-turn-helix domain-containing protein;protein_id=WP_032440572.1;transl_table=11 NZ_CP116217.1 RefSeq gene 82593 83522 . + . ID=gene-PHA56_RS31405;Name=PHA56_RS31405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31405;old_locus_tag=PHA56_31405 NZ_CP116217.1 Protein Homology CDS 82593 83522 . + 0 ID=cds-WP_064357981.1;Parent=gene-PHA56_RS31405;Dbxref=Genbank:WP_064357981.1;Name=WP_064357981.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013811213.1;locus_tag=PHA56_RS31405;product=hypothetical protein;protein_id=WP_064357981.1;transl_table=11 NZ_CP116217.1 RefSeq gene 83515 84009 . + . ID=gene-PHA56_RS31410;Name=PHA56_RS31410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31410;old_locus_tag=PHA56_31410 NZ_CP116217.1 Protein Homology CDS 83515 84009 . + 0 ID=cds-WP_064357935.1;Parent=gene-PHA56_RS31410;Dbxref=Genbank:WP_064357935.1;Name=WP_064357935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019456108.1;locus_tag=PHA56_RS31410;product=molybdopterin-dependent oxidoreductase;protein_id=WP_064357935.1;transl_table=11 NZ_CP116217.1 RefSeq gene 84006 85700 . + . ID=gene-PHA56_RS31415;Name=PHA56_RS31415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31415;old_locus_tag=PHA56_31415 NZ_CP116217.1 Protein Homology CDS 84006 85700 . + 0 ID=cds-WP_064357933.1;Parent=gene-PHA56_RS31415;Dbxref=Genbank:WP_064357933.1;Name=WP_064357933.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001773449.1;locus_tag=PHA56_RS31415;product=hybrid sensor histidine kinase/response regulator;protein_id=WP_064357933.1;transl_table=11 NZ_CP116217.1 RefSeq gene 85884 86837 . + . ID=gene-PHA56_RS31420;Name=PHA56_RS31420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31420;old_locus_tag=PHA56_31420 NZ_CP116217.1 Protein Homology CDS 85884 86837 . + 0 ID=cds-WP_064357932.1;Parent=gene-PHA56_RS31420;Dbxref=Genbank:WP_064357932.1;Name=WP_064357932.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490541.1;locus_tag=PHA56_RS31420;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=WP_064357932.1;transl_table=11 NZ_CP116217.1 RefSeq gene 86987 88915 . - . ID=gene-PHA56_RS31425;Name=PHA56_RS31425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31425;old_locus_tag=PHA56_31425 NZ_CP116217.1 Protein Homology CDS 86987 88915 . - 0 ID=cds-WP_064357930.1;Parent=gene-PHA56_RS31425;Dbxref=Genbank:WP_064357930.1;Name=WP_064357930.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015632446.1;locus_tag=PHA56_RS31425;product=relaxase/mobilization nuclease domain-containing protein;protein_id=WP_064357930.1;transl_table=11 NZ_CP116217.1 RefSeq gene 88918 89229 . - . ID=gene-PHA56_RS31430;Name=mobA;gbkey=Gene;gene=mobA;gene_biotype=protein_coding;locus_tag=PHA56_RS31430;old_locus_tag=PHA56_31430 NZ_CP116217.1 Protein Homology CDS 88918 89229 . - 0 ID=cds-WP_016162079.1;Parent=gene-PHA56_RS31430;Dbxref=Genbank:WP_016162079.1;Name=WP_016162079.1;Ontology_term=GO:0006355;gbkey=CDS;gene=mobA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017493764.1;locus_tag=PHA56_RS31430;product=plasmid mobilization protein MobA;protein_id=WP_016162079.1;transl_table=11 NZ_CP116217.1 RefSeq gene 89519 89938 . + . ID=gene-PHA56_RS31435;Name=PHA56_RS31435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31435;old_locus_tag=PHA56_31435 NZ_CP116217.1 GeneMarkS-2+ CDS 89519 89938 . + 0 ID=cds-WP_058674280.1;Parent=gene-PHA56_RS31435;Dbxref=Genbank:WP_058674280.1;Name=WP_058674280.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PHA56_RS31435;product=hypothetical protein;protein_id=WP_058674280.1;transl_table=11 NZ_CP116217.1 RefSeq gene 90230 90550 . - . ID=gene-PHA56_RS31440;Name=PHA56_RS31440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31440;old_locus_tag=PHA56_31440 NZ_CP116217.1 GeneMarkS-2+ CDS 90230 90550 . - 0 ID=cds-WP_064357929.1;Parent=gene-PHA56_RS31440;Dbxref=Genbank:WP_064357929.1;Name=WP_064357929.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PHA56_RS31440;product=hypothetical protein;protein_id=WP_064357929.1;transl_table=11 NZ_CP116217.1 RefSeq gene 90827 91795 . - . ID=gene-PHA56_RS31445;Name=PHA56_RS31445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31445;old_locus_tag=PHA56_31445 NZ_CP116217.1 Protein Homology CDS 90827 91795 . - 0 ID=cds-WP_080453768.1;Parent=gene-PHA56_RS31445;Dbxref=Genbank:WP_080453768.1;Name=WP_080453768.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1;locus_tag=PHA56_RS31445;product=IS5-like element IS903B family transposase;protein_id=WP_080453768.1;transl_table=11 NZ_CP116217.1 RefSeq gene 92060 92344 . - . ID=gene-PHA56_RS31450;Name=PHA56_RS31450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31450;old_locus_tag=PHA56_31450 NZ_CP116217.1 Protein Homology CDS 92060 92344 . - 0 ID=cds-WP_032440566.1;Parent=gene-PHA56_RS31450;Dbxref=Genbank:WP_032440566.1;Name=WP_032440566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020805665.1;locus_tag=PHA56_RS31450;product=hypothetical protein;protein_id=WP_032440566.1;transl_table=11 NZ_CP116217.1 RefSeq gene 92388 92828 . - . ID=gene-PHA56_RS31455;Name=PHA56_RS31455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31455;old_locus_tag=PHA56_31455 NZ_CP116217.1 Protein Homology CDS 92388 92828 . - 0 ID=cds-WP_004187338.1;Parent=gene-PHA56_RS31455;Dbxref=Genbank:WP_004187338.1;Name=WP_004187338.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004187338.1;locus_tag=PHA56_RS31455;product=antirestriction protein;protein_id=WP_004187338.1;transl_table=11 NZ_CP116217.1 RefSeq gene 93029 93334 . - . ID=gene-PHA56_RS31460;Name=PHA56_RS31460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31460;old_locus_tag=PHA56_31460 NZ_CP116217.1 Protein Homology CDS 93029 93334 . - 0 ID=cds-WP_004187339.1;Parent=gene-PHA56_RS31460;Dbxref=Genbank:WP_004187339.1;Name=WP_004187339.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020805649.1;locus_tag=PHA56_RS31460;product=hypothetical protein;protein_id=WP_004187339.1;transl_table=11 NZ_CP116217.1 RefSeq gene 93396 93806 . - . ID=gene-PHA56_RS31465;Name=PHA56_RS31465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31465;old_locus_tag=PHA56_31465 NZ_CP116217.1 Protein Homology CDS 93396 93806 . - 0 ID=cds-WP_004187342.1;Parent=gene-PHA56_RS31465;Dbxref=Genbank:WP_004187342.1;Name=WP_004187342.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004187342.1;locus_tag=PHA56_RS31465;product=DUF1380 family protein;protein_id=WP_004187342.1;transl_table=11 NZ_CP116217.1 RefSeq gene 93891 94127 . - . ID=gene-PHA56_RS31470;Name=PHA56_RS31470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31470;old_locus_tag=PHA56_31470 NZ_CP116217.1 GeneMarkS-2+ CDS 93891 94127 . - 0 ID=cds-WP_177952325.1;Parent=gene-PHA56_RS31470;Dbxref=Genbank:WP_177952325.1;Name=WP_177952325.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PHA56_RS31470;product=hypothetical protein;protein_id=WP_177952325.1;transl_table=11 NZ_CP116217.1 RefSeq gene 94426 94656 . - . ID=gene-PHA56_RS31475;Name=PHA56_RS31475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31475;old_locus_tag=PHA56_31475 NZ_CP116217.1 Protein Homology CDS 94426 94656 . - 0 ID=cds-WP_070083114.1;Parent=gene-PHA56_RS31475;Dbxref=Genbank:WP_070083114.1;Name=WP_070083114.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004187345.1;locus_tag=PHA56_RS31475;product=Hha/YmoA family nucleoid-associated regulatory protein;protein_id=WP_070083114.1;transl_table=11 NZ_CP116217.1 RefSeq gene 94754 95092 . - . ID=gene-PHA56_RS31480;Name=PHA56_RS31480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31480;old_locus_tag=PHA56_31480 NZ_CP116217.1 Protein Homology CDS 94754 95092 . - 0 ID=cds-WP_004187354.1;Parent=gene-PHA56_RS31480;Dbxref=Genbank:WP_004187354.1;Name=WP_004187354.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004187354.1;locus_tag=PHA56_RS31480;product=hypothetical protein;protein_id=WP_004187354.1;transl_table=11 NZ_CP116217.1 RefSeq gene 95282 96142 . - . ID=gene-PHA56_RS31485;Name=PHA56_RS31485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31485;old_locus_tag=PHA56_31485 NZ_CP116217.1 Protein Homology CDS 95282 96142 . - 0 ID=cds-WP_070083113.1;Parent=gene-PHA56_RS31485;Dbxref=Genbank:WP_070083113.1;Name=WP_070083113.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020805661.1;locus_tag=PHA56_RS31485;product=DUF4942 domain-containing protein;protein_id=WP_070083113.1;transl_table=11 NZ_CP116217.1 RefSeq gene 96215 96394 . - . ID=gene-PHA56_RS31490;Name=PHA56_RS31490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31490;old_locus_tag=PHA56_31490 NZ_CP116217.1 Protein Homology CDS 96215 96394 . - 0 ID=cds-WP_023285836.1;Parent=gene-PHA56_RS31490;Dbxref=Genbank:WP_023285836.1;Name=WP_023285836.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004187364.1;locus_tag=PHA56_RS31490;product=hypothetical protein;protein_id=WP_023285836.1;transl_table=11 NZ_CP116217.1 RefSeq gene 97037 97303 . - . ID=gene-PHA56_RS31495;Name=PHA56_RS31495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31495;old_locus_tag=PHA56_31495 NZ_CP116217.1 Protein Homology CDS 97037 97303 . - 0 ID=cds-WP_023285835.1;Parent=gene-PHA56_RS31495;Dbxref=Genbank:WP_023285835.1;Name=WP_023285835.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020805667.1;locus_tag=PHA56_RS31495;product=helix-turn-helix transcriptional regulator;protein_id=WP_023285835.1;transl_table=11 NZ_CP116217.1 RefSeq gene 97348 97797 . - . ID=gene-PHA56_RS31500;Name=PHA56_RS31500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31500;old_locus_tag=PHA56_31500 NZ_CP116217.1 Protein Homology CDS 97348 97797 . - 0 ID=cds-WP_032440561.1;Parent=gene-PHA56_RS31500;Dbxref=Genbank:WP_032440561.1;Name=WP_032440561.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020805635.1;locus_tag=PHA56_RS31500;product=JAB domain-containing protein;protein_id=WP_032440561.1;transl_table=11 NZ_CP116217.1 RefSeq gene 97915 98412 . - . ID=gene-PHA56_RS31505;Name=PHA56_RS31505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31505;old_locus_tag=PHA56_31505 NZ_CP116217.1 Protein Homology CDS 97915 98412 . - 0 ID=cds-WP_032440560.1;Parent=gene-PHA56_RS31505;Dbxref=Genbank:WP_032440560.1;Name=WP_032440560.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004206906.1;locus_tag=PHA56_RS31505;product=hypothetical protein;protein_id=WP_032440560.1;transl_table=11 NZ_CP116217.1 RefSeq gene 98405 98650 . - . ID=gene-PHA56_RS31510;Name=PHA56_RS31510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31510;old_locus_tag=PHA56_31510 NZ_CP116217.1 Protein Homology CDS 98405 98650 . - 0 ID=cds-WP_032440579.1;Parent=gene-PHA56_RS31510;Dbxref=Genbank:WP_032440579.1;Name=WP_032440579.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004206905.1;locus_tag=PHA56_RS31510;product=hypothetical protein;protein_id=WP_032440579.1;transl_table=11 NZ_CP116217.1 RefSeq gene 99092 99535 . - . ID=gene-PHA56_RS31515;Name=PHA56_RS31515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31515;old_locus_tag=PHA56_31515 NZ_CP116217.1 Protein Homology CDS 99092 99535 . - 0 ID=cds-WP_032440559.1;Parent=gene-PHA56_RS31515;Dbxref=Genbank:WP_032440559.1;Name=WP_032440559.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001617754.1;locus_tag=PHA56_RS31515;product=plasmid partitioning/stability family protein;protein_id=WP_032440559.1;transl_table=11 NZ_CP116217.1 RefSeq gene 99538 100512 . - . ID=gene-PHA56_RS31520;Name=PHA56_RS31520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31520;old_locus_tag=PHA56_31520 NZ_CP116217.1 Protein Homology CDS 99538 100512 . - 0 ID=cds-WP_032440558.1;Parent=gene-PHA56_RS31520;Dbxref=Genbank:WP_032440558.1;Name=WP_032440558.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001396154.1;locus_tag=PHA56_RS31520;product=plasmid segregation protein ParM;protein_id=WP_032440558.1;transl_table=11 NZ_CP116217.1 RefSeq gene 100753 101493 . - . ID=gene-PHA56_RS31525;Name=PHA56_RS31525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31525;old_locus_tag=PHA56_31525 NZ_CP116217.1 Protein Homology CDS 100753 101493 . - 0 ID=cds-WP_064357926.1;Parent=gene-PHA56_RS31525;Dbxref=Genbank:WP_064357926.1;Name=WP_064357926.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004187383.1;locus_tag=PHA56_RS31525;product=tyrosine-type recombinase/integrase;protein_id=WP_064357926.1;transl_table=11 NZ_CP116217.1 RefSeq gene 101560 101988 . - . ID=gene-PHA56_RS31530;Name=PHA56_RS31530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31530;old_locus_tag=PHA56_31530 NZ_CP116217.1 GeneMarkS-2+ CDS 101560 101988 . - 0 ID=cds-WP_223226984.1;Parent=gene-PHA56_RS31530;Dbxref=Genbank:WP_223226984.1;Name=WP_223226984.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PHA56_RS31530;product=hypothetical protein;protein_id=WP_223226984.1;transl_table=11 NZ_CP116217.1 RefSeq gene 102116 102349 . - . ID=gene-PHA56_RS31535;Name=PHA56_RS31535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31535;old_locus_tag=PHA56_31535 NZ_CP116217.1 Protein Homology CDS 102116 102349 . - 0 ID=cds-WP_227633964.1;Parent=gene-PHA56_RS31535;Dbxref=Genbank:WP_227633964.1;Name=WP_227633964.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020316875.1;locus_tag=PHA56_RS31535;product=helix-turn-helix domain-containing protein;protein_id=WP_227633964.1;transl_table=11 NZ_CP116217.1 RefSeq gene 102550 102675 . - . ID=gene-PHA56_RS31540;Name=PHA56_RS31540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31540;old_locus_tag=PHA56_31540 NZ_CP116217.1 GeneMarkS-2+ CDS 102550 102675 . - 0 ID=cds-WP_255874637.1;Parent=gene-PHA56_RS31540;Dbxref=Genbank:WP_255874637.1;Name=WP_255874637.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PHA56_RS31540;product=hypothetical protein;protein_id=WP_255874637.1;transl_table=11 NZ_CP116217.1 RefSeq gene 102974 103671 . - . ID=gene-PHA56_RS31545;Name=PHA56_RS31545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31545;old_locus_tag=PHA56_31545 NZ_CP116217.1 Protein Homology CDS 103422 103671 . - 0 ID=cds-WP_224252790.1;Parent=gene-PHA56_RS31545;Dbxref=Genbank:WP_224252790.1;Name=WP_224252790.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=PHA56_RS31545;product=IS1 family transposase;protein_id=WP_224252790.1;transl_table=11 NZ_CP116217.1 Protein Homology CDS 102974 103422 . - 2 ID=cds-WP_224252790.1;Parent=gene-PHA56_RS31545;Dbxref=Genbank:WP_224252790.1;Name=WP_224252790.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=PHA56_RS31545;product=IS1 family transposase;protein_id=WP_224252790.1;transl_table=11 NZ_CP116217.1 RefSeq gene 103807 104238 . + . ID=gene-PHA56_RS31550;Name=umuD;gbkey=Gene;gene=umuD;gene_biotype=protein_coding;locus_tag=PHA56_RS31550;old_locus_tag=PHA56_31550 NZ_CP116217.1 Protein Homology CDS 103807 104238 . + 0 ID=cds-WP_006796638.1;Parent=gene-PHA56_RS31550;Dbxref=Genbank:WP_006796638.1;Name=WP_006796638.1;Ontology_term=GO:0003677;gbkey=CDS;gene=umuD;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229772.1;locus_tag=PHA56_RS31550;product=translesion error-prone DNA polymerase V autoproteolytic subunit;protein_id=WP_006796638.1;transl_table=11 NZ_CP116217.1 RefSeq gene 104238 105509 . + . ID=gene-PHA56_RS31555;Name=PHA56_RS31555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31555;old_locus_tag=PHA56_31555 NZ_CP116217.1 Protein Homology CDS 104238 105509 . + 0 ID=cds-WP_064357922.1;Parent=gene-PHA56_RS31555;Dbxref=Genbank:WP_064357922.1;Name=WP_064357922.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008502211.1;locus_tag=PHA56_RS31555;product=Y-family DNA polymerase;protein_id=WP_064357922.1;transl_table=11 ##sequence-region NZ_CP116219.1 1 53269 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1134687 NZ_CP116219.1 RefSeq region 1 53269 . + . ID=NZ_CP116219.1:1..53269;Dbxref=taxon:1134687;Is_circular=true;Name=p2562_5;collection-date=2018;country=China: Hangzhou;gbkey=Src;genome=plasmid;isolation-source=sputum;mol_type=genomic DNA;nat-host=Homo sapiens;plasmid-name=p2562_5;strain=2563 NZ_CP116219.1 RefSeq gene 4543 5154 . - . ID=gene-PHA56_RS31920;Name=PHA56_RS31920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31920;old_locus_tag=PHA56_31915 NZ_CP116219.1 Protein Homology CDS 4543 5154 . - 0 ID=cds-WP_014228919.1;Parent=gene-PHA56_RS31920;Dbxref=Genbank:WP_014228919.1;Name=WP_014228919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014228919.1;locus_tag=PHA56_RS31920;product=tail assembly protein;protein_id=WP_014228919.1;transl_table=11 NZ_CP116219.1 RefSeq gene 5170 5520 . - . ID=gene-PHA56_RS31925;Name=PHA56_RS31925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31925;old_locus_tag=PHA56_31920 NZ_CP116219.1 GeneMarkS-2+ CDS 5170 5520 . - 0 ID=cds-WP_021462612.1;Parent=gene-PHA56_RS31925;Dbxref=Genbank:WP_021462612.1;Name=WP_021462612.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PHA56_RS31925;product=hypothetical protein;protein_id=WP_021462612.1;transl_table=11 NZ_CP116219.1 RefSeq gene 5552 6262 . - . ID=gene-PHA56_RS31930;Name=PHA56_RS31930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31930;old_locus_tag=PHA56_31925 NZ_CP116219.1 Protein Homology CDS 5552 6262 . - 0 ID=cds-WP_014228918.1;Parent=gene-PHA56_RS31930;Dbxref=Genbank:WP_014228918.1;Name=WP_014228918.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004122964.1;locus_tag=PHA56_RS31930;product=C40 family peptidase;protein_id=WP_014228918.1;transl_table=11 NZ_CP116219.1 RefSeq gene 6264 7019 . - . ID=gene-PHA56_RS31935;Name=PHA56_RS31935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31935;old_locus_tag=PHA56_31930 NZ_CP116219.1 Protein Homology CDS 6264 7019 . - 0 ID=cds-WP_014907809.1;Parent=gene-PHA56_RS31935;Dbxref=Genbank:WP_014907809.1;Name=WP_014907809.1;Ontology_term=GO:0016032,GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008322438.1;locus_tag=PHA56_RS31935;product=phage minor tail protein L;protein_id=WP_014907809.1;transl_table=11 NZ_CP116219.1 RefSeq gene 7016 7354 . - . ID=gene-PHA56_RS31940;Name=PHA56_RS31940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31940;old_locus_tag=PHA56_31935 NZ_CP116219.1 Protein Homology CDS 7016 7354 . - 0 ID=cds-WP_014228916.1;Parent=gene-PHA56_RS31940;Dbxref=Genbank:WP_014228916.1;Name=WP_014228916.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017898999.1;locus_tag=PHA56_RS31940;product=phage tail protein;protein_id=WP_014228916.1;transl_table=11 NZ_CP116219.1 RefSeq gene 7354 10689 . - . ID=gene-PHA56_RS31945;Name=PHA56_RS31945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31945;old_locus_tag=PHA56_31940 NZ_CP116219.1 Protein Homology CDS 7354 10689 . - 0 ID=cds-WP_032422481.1;Parent=gene-PHA56_RS31945;Dbxref=Genbank:WP_032422481.1;Name=WP_032422481.1;Ontology_term=GO:0016032,GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015974459.1;locus_tag=PHA56_RS31945;product=phage tail tape measure protein;protein_id=WP_032422481.1;transl_table=11 NZ_CP116219.1 RefSeq gene 10922 11287 . - . ID=gene-PHA56_RS31950;Name=PHA56_RS31950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31950;old_locus_tag=PHA56_31945 NZ_CP116219.1 Protein Homology CDS 10922 11287 . - 0 ID=cds-WP_014228914.1;Parent=gene-PHA56_RS31950;Dbxref=Genbank:WP_014228914.1;Name=WP_014228914.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004148015.1;locus_tag=PHA56_RS31950;product=phage tail protein;protein_id=WP_014228914.1;transl_table=11 NZ_CP116219.1 RefSeq gene 11345 11806 . - . ID=gene-PHA56_RS31955;Name=PHA56_RS31955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31955;old_locus_tag=PHA56_31950 NZ_CP116219.1 Protein Homology CDS 11345 11806 . - 0 ID=cds-WP_014228913.1;Parent=gene-PHA56_RS31955;Dbxref=Genbank:WP_014228913.1;Name=WP_014228913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014228913.1;locus_tag=PHA56_RS31955;product=major tail shaft subunit;protein_id=WP_014228913.1;transl_table=11 NZ_CP116219.1 RefSeq gene 11838 12239 . - . ID=gene-PHA56_RS31960;Name=PHA56_RS31960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31960;old_locus_tag=PHA56_31955 NZ_CP116219.1 Protein Homology CDS 11838 12239 . - 0 ID=cds-WP_021462608.1;Parent=gene-PHA56_RS31960;Dbxref=Genbank:WP_021462608.1;Name=WP_021462608.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003832376.1;locus_tag=PHA56_RS31960;product=HK97 gp10 family phage protein;protein_id=WP_021462608.1;transl_table=11 NZ_CP116219.1 RefSeq gene 12236 12625 . - . ID=gene-PHA56_RS31965;Name=PHA56_RS31965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31965;old_locus_tag=PHA56_31960 NZ_CP116219.1 Protein Homology CDS 12236 12625 . - 0 ID=cds-WP_014228911.1;Parent=gene-PHA56_RS31965;Dbxref=Genbank:WP_014228911.1;Name=WP_014228911.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017880258.1;locus_tag=PHA56_RS31965;product=hypothetical protein;protein_id=WP_014228911.1;transl_table=11 NZ_CP116219.1 RefSeq gene 12606 12944 . - . ID=gene-PHA56_RS31970;Name=PHA56_RS31970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31970;old_locus_tag=PHA56_31965 NZ_CP116219.1 Protein Homology CDS 12606 12944 . - 0 ID=cds-WP_014228910.1;Parent=gene-PHA56_RS31970;Dbxref=Genbank:WP_014228910.1;Name=WP_014228910.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017880259.1;locus_tag=PHA56_RS31970;product=head-tail adaptor protein;protein_id=WP_014228910.1;transl_table=11 NZ_CP116219.1 RefSeq gene 12941 13258 . - . ID=gene-PHA56_RS31975;Name=PHA56_RS31975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31975;old_locus_tag=PHA56_31970 NZ_CP116219.1 Protein Homology CDS 12941 13258 . - 0 ID=cds-WP_020317538.1;Parent=gene-PHA56_RS31975;Dbxref=Genbank:WP_020317538.1;Name=WP_020317538.1;Ontology_term=GO:0016032;gbkey=CDS;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016160674.1;locus_tag=PHA56_RS31975;product=head-tail connector protein;protein_id=WP_020317538.1;transl_table=11 NZ_CP116219.1 RefSeq gene 13239 13499 . - . ID=gene-PHA56_RS31980;Name=PHA56_RS31980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31980;old_locus_tag=PHA56_31975 NZ_CP116219.1 Protein Homology CDS 13239 13499 . - 0 ID=cds-WP_014228908.1;Parent=gene-PHA56_RS31980;Dbxref=Genbank:WP_014228908.1;Name=WP_014228908.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016160673.1;locus_tag=PHA56_RS31980;product=hypothetical protein;protein_id=WP_014228908.1;transl_table=11 NZ_CP116219.1 RefSeq gene 13558 14844 . - . ID=gene-PHA56_RS31985;Name=PHA56_RS31985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31985;old_locus_tag=PHA56_31980 NZ_CP116219.1 Protein Homology CDS 13558 14844 . - 0 ID=cds-WP_208787266.1;Parent=gene-PHA56_RS31985;Dbxref=Genbank:WP_208787266.1;Name=WP_208787266.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004148013.1;locus_tag=PHA56_RS31985;product=phage major capsid protein;protein_id=WP_208787266.1;transl_table=11 NZ_CP116219.1 RefSeq gene 14922 15842 . - . ID=gene-PHA56_RS31990;Name=PHA56_RS31990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31990;old_locus_tag=PHA56_31985 NZ_CP116219.1 Protein Homology CDS 14922 15842 . - 0 ID=cds-WP_014907815.1;Parent=gene-PHA56_RS31990;Dbxref=Genbank:WP_014907815.1;Name=WP_014907815.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015974509.1;locus_tag=PHA56_RS31990;product=S49 family peptidase;protein_id=WP_014907815.1;transl_table=11 NZ_CP116219.1 RefSeq gene 15879 17138 . - . ID=gene-PHA56_RS31995;Name=PHA56_RS31995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31995;old_locus_tag=PHA56_31990 NZ_CP116219.1 Protein Homology CDS 15879 17138 . - 0 ID=cds-WP_023279520.1;Parent=gene-PHA56_RS31995;Dbxref=Genbank:WP_023279520.1;Name=WP_023279520.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004148010.1;locus_tag=PHA56_RS31995;product=phage portal protein;protein_id=WP_023279520.1;transl_table=11 NZ_CP116219.1 RefSeq gene 17138 17317 . - . ID=gene-PHA56_RS32000;Name=PHA56_RS32000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS32000;old_locus_tag=PHA56_31995 NZ_CP116219.1 Protein Homology CDS 17138 17317 . - 0 ID=cds-WP_020318187.1;Parent=gene-PHA56_RS32000;Dbxref=Genbank:WP_020318187.1;Name=WP_020318187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017880262.1;locus_tag=PHA56_RS32000;product=hypothetical protein;protein_id=WP_020318187.1;transl_table=11 NZ_CP116219.1 RefSeq gene 17311 19032 . - . ID=gene-PHA56_RS32005;Name=PHA56_RS32005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS32005;old_locus_tag=PHA56_32000 NZ_CP116219.1 Protein Homology CDS 17311 19032 . - 0 ID=cds-WP_014228904.1;Parent=gene-PHA56_RS32005;Dbxref=Genbank:WP_014228904.1;Name=WP_014228904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014228904.1;locus_tag=PHA56_RS32005;product=terminase large subunit;protein_id=WP_014228904.1;transl_table=11 NZ_CP116219.1 RefSeq gene 19032 19466 . - . ID=gene-PHA56_RS32010;Name=PHA56_RS32010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS32010;old_locus_tag=PHA56_32005 NZ_CP116219.1 Protein Homology CDS 19032 19466 . - 0 ID=cds-WP_012542168.1;Parent=gene-PHA56_RS32010;Dbxref=Genbank:WP_012542168.1;Name=WP_012542168.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012542168.1;locus_tag=PHA56_RS32010;product=phage terminase small subunit P27 family;protein_id=WP_012542168.1;transl_table=11 NZ_CP116219.1 RefSeq gene 19715 20146 . - . ID=gene-PHA56_RS32015;Name=PHA56_RS32015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS32015;old_locus_tag=PHA56_32010 NZ_CP116219.1 Protein Homology CDS 19715 20146 . - 0 ID=cds-WP_087760297.1;Parent=gene-PHA56_RS32015;Dbxref=Genbank:WP_087760297.1;Name=WP_087760297.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012542169.1;locus_tag=PHA56_RS32015;product=hypothetical protein;protein_id=WP_087760297.1;transl_table=11 NZ_CP116219.1 RefSeq gene 20143 20460 . - . ID=gene-PHA56_RS32020;Name=PHA56_RS32020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS32020;old_locus_tag=PHA56_32015 NZ_CP116219.1 Protein Homology CDS 20143 20460 . - 0 ID=cds-WP_016160653.1;Parent=gene-PHA56_RS32020;Dbxref=Genbank:WP_016160653.1;Name=WP_016160653.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014228902.1;locus_tag=PHA56_RS32020;product=hypothetical protein;protein_id=WP_016160653.1;transl_table=11 NZ_CP116219.1 RefSeq gene 20412 20774 . - . ID=gene-PHA56_RS32025;Name=PHA56_RS32025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS32025;old_locus_tag=PHA56_32020 NZ_CP116219.1 Protein Homology CDS 20412 20774 . - 0 ID=cds-WP_014228901.1;Parent=gene-PHA56_RS32025;Dbxref=Genbank:WP_014228901.1;Name=WP_014228901.1;Ontology_term=GO:0003676,GO:0004519;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,endonuclease activity|0004519||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020803185.1;locus_tag=PHA56_RS32025;product=HNH endonuclease;protein_id=WP_014228901.1;transl_table=11 NZ_CP116219.1 RefSeq gene 20758 20919 . - . ID=gene-PHA56_RS32030;Name=PHA56_RS32030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS32030;old_locus_tag=PHA56_32025 NZ_CP116219.1 Protein Homology CDS 20758 20919 . - 0 ID=cds-WP_170849524.1;Parent=gene-PHA56_RS32030;Dbxref=Genbank:WP_170849524.1;Name=WP_170849524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016160652.1;locus_tag=PHA56_RS32030;product=hypothetical protein;protein_id=WP_170849524.1;transl_table=11 NZ_CP116219.1 RefSeq gene 21001 21351 . - . ID=gene-PHA56_RS32035;Name=PHA56_RS32035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS32035;old_locus_tag=PHA56_32030 NZ_CP116219.1 Protein Homology CDS 21001 21351 . - 0 ID=cds-WP_223226734.1;Parent=gene-PHA56_RS32035;Dbxref=Genbank:WP_223226734.1;Name=WP_223226734.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022181.2;locus_tag=PHA56_RS32035;product=DUF2514 family protein;protein_id=WP_223226734.1;transl_table=11 NZ_CP116219.1 RefSeq gene 21344 21862 . - . ID=gene-PHA56_RS32040;Name=PHA56_RS32040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS32040;old_locus_tag=PHA56_32035 NZ_CP116219.1 Protein Homology CDS 21344 21862 . - 0 ID=cds-WP_061155046.1;Parent=gene-PHA56_RS32040;Dbxref=Genbank:WP_061155046.1;Name=WP_061155046.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015959608.1;locus_tag=PHA56_RS32040;product=Rha family transcriptional regulator;protein_id=WP_061155046.1;transl_table=11 NZ_CP116219.1 RefSeq gene 22171 22632 . - . ID=gene-PHA56_RS32045;Name=PHA56_RS32045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS32045;old_locus_tag=PHA56_32040 NZ_CP116219.1 Protein Homology CDS 22171 22632 . - 0 ID=cds-WP_077272074.1;Parent=gene-PHA56_RS32045;Dbxref=Genbank:WP_077272074.1;Name=WP_077272074.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008814357.1;locus_tag=PHA56_RS32045;product=lysis protein;protein_id=WP_077272074.1;transl_table=11 NZ_CP116219.1 RefSeq gene 22629 23159 . - . ID=gene-PHA56_RS32050;Name=PHA56_RS32050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS32050;old_locus_tag=PHA56_32045 NZ_CP116219.1 Protein Homology CDS 22629 23159 . - 0 ID=cds-WP_087760298.1;Parent=gene-PHA56_RS32050;Dbxref=Genbank:WP_087760298.1;Name=WP_087760298.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225559.1;locus_tag=PHA56_RS32050;product=lysozyme;protein_id=WP_087760298.1;transl_table=11 NZ_CP116219.1 RefSeq gene 23137 23373 . - . ID=gene-PHA56_RS32055;Name=PHA56_RS32055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS32055;old_locus_tag=PHA56_32050 NZ_CP116219.1 Protein Homology CDS 23137 23373 . - 0 ID=cds-WP_004111739.1;Parent=gene-PHA56_RS32055;Dbxref=Genbank:WP_004111739.1;Name=WP_004111739.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004111739.1;locus_tag=PHA56_RS32055;product=class II holin family protein;protein_id=WP_004111739.1;transl_table=11 NZ_CP116219.1 RefSeq gene 24317 24520 . + . ID=gene-PHA56_RS32060;Name=PHA56_RS32060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS32060;old_locus_tag=PHA56_32055 NZ_CP116219.1 GeneMarkS-2+ CDS 24317 24520 . + 0 ID=cds-WP_004147997.1;Parent=gene-PHA56_RS32060;Dbxref=Genbank:WP_004147997.1;Name=WP_004147997.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PHA56_RS32060;product=hypothetical protein;protein_id=WP_004147997.1;transl_table=11 NZ_CP116219.1 RefSeq gene 24764 25366 . - . ID=gene-PHA56_RS32065;Name=PHA56_RS32065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS32065;old_locus_tag=PHA56_32060 NZ_CP116219.1 Protein Homology CDS 24764 25366 . - 0 ID=cds-WP_087760299.1;Parent=gene-PHA56_RS32065;Dbxref=Genbank:WP_087760299.1;Name=WP_087760299.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016160647.1;locus_tag=PHA56_RS32065;product=hypothetical protein;protein_id=WP_087760299.1;transl_table=11 NZ_CP116219.1 RefSeq gene 25383 26414 . - . ID=gene-PHA56_RS32070;Name=PHA56_RS32070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS32070;old_locus_tag=PHA56_32065 NZ_CP116219.1 Protein Homology CDS 25383 26414 . - 0 ID=cds-WP_087760300.1;Parent=gene-PHA56_RS32070;Dbxref=Genbank:WP_087760300.1;Name=WP_087760300.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020315049.1;locus_tag=PHA56_RS32070;product=DUF968 domain-containing protein;protein_id=WP_087760300.1;transl_table=11 NZ_CP116219.1 RefSeq gene 26614 27006 . - . ID=gene-PHA56_RS32075;Name=PHA56_RS32075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS32075;old_locus_tag=PHA56_32070 NZ_CP116219.1 Protein Homology CDS 26614 27006 . - 0 ID=cds-WP_016160645.1;Parent=gene-PHA56_RS32075;Dbxref=Genbank:WP_016160645.1;Name=WP_016160645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016160645.1;locus_tag=PHA56_RS32075;product=hypothetical protein;protein_id=WP_016160645.1;transl_table=11 NZ_CP116219.1 RefSeq gene 27047 27304 . - . ID=gene-PHA56_RS32080;Name=PHA56_RS32080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS32080;old_locus_tag=PHA56_32075 NZ_CP116219.1 Protein Homology CDS 27047 27304 . - 0 ID=cds-WP_022065893.1;Parent=gene-PHA56_RS32080;Dbxref=Genbank:WP_022065893.1;Name=WP_022065893.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016150441.1;locus_tag=PHA56_RS32080;product=hypothetical protein;protein_id=WP_022065893.1;transl_table=11 NZ_CP116219.1 RefSeq gene 27349 27582 . - . ID=gene-PHA56_RS32085;Name=PHA56_RS32085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS32085;old_locus_tag=PHA56_32080 NZ_CP116219.1 Protein Homology CDS 27349 27582 . - 0 ID=cds-WP_087760301.1;Parent=gene-PHA56_RS32085;Dbxref=Genbank:WP_087760301.1;Name=WP_087760301.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012542186.1;locus_tag=PHA56_RS32085;product=DinI family protein;protein_id=WP_087760301.1;transl_table=11 NZ_CP116219.1 RefSeq gene 28052 28279 . + . ID=gene-PHA56_RS32090;Name=PHA56_RS32090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS32090;old_locus_tag=PHA56_32085 NZ_CP116219.1 Protein Homology CDS 28052 28279 . + 0 ID=cds-WP_087760291.1;Parent=gene-PHA56_RS32090;Dbxref=Genbank:WP_087760291.1;Name=WP_087760291.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012542191.1;locus_tag=PHA56_RS32090;product=DUF1737 domain-containing protein;protein_id=WP_087760291.1;transl_table=11 NZ_CP116219.1 RefSeq gene 29247 31274 . + . ID=gene-PHA56_RS32095;Name=PHA56_RS32095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS32095;old_locus_tag=PHA56_32090 NZ_CP116219.1 GeneMarkS-2+ CDS 29247 31274 . + 0 ID=cds-WP_124946306.1;Parent=gene-PHA56_RS32095;Dbxref=Genbank:WP_124946306.1;Name=WP_124946306.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PHA56_RS32095;product=hypothetical protein;protein_id=WP_124946306.1;transl_table=11 NZ_CP116219.1 RefSeq gene 31748 32188 . - . ID=gene-PHA56_RS32100;Name=PHA56_RS32100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS32100;old_locus_tag=PHA56_32095 NZ_CP116219.1 Protein Homology CDS 31748 32188 . - 0 ID=cds-WP_087760288.1;Parent=gene-PHA56_RS32100;Dbxref=Genbank:WP_087760288.1;Name=WP_087760288.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016528969.1;locus_tag=PHA56_RS32100;product=PerC family transcriptional regulator;protein_id=WP_087760288.1;transl_table=11 NZ_CP116219.1 RefSeq gene 32202 32747 . - . ID=gene-PHA56_RS32105;Name=PHA56_RS32105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS32105;old_locus_tag=PHA56_32100 NZ_CP116219.1 Protein Homology CDS 32202 32747 . - 0 ID=cds-WP_223226730.1;Parent=gene-PHA56_RS32105;Dbxref=Genbank:WP_223226730.1;Name=WP_223226730.1;Ontology_term=GO:0006270;gbkey=CDS;go_process=DNA replication initiation|0006270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016160640.1;locus_tag=PHA56_RS32105;product=replication protein P;protein_id=WP_223226730.1;transl_table=11 NZ_CP116219.1 RefSeq gene 32659 33678 . - . ID=gene-PHA56_RS32110;Name=PHA56_RS32110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS32110;old_locus_tag=PHA56_32105 NZ_CP116219.1 Protein Homology CDS 32659 33678 . - 0 ID=cds-WP_181961092.1;Parent=gene-PHA56_RS32110;Dbxref=Genbank:WP_181961092.1;Name=WP_181961092.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014228886.1;locus_tag=PHA56_RS32110;product=DnaT-like ssDNA-binding domain-containing protein;protein_id=WP_181961092.1;transl_table=11 NZ_CP116219.1 RefSeq gene 33723 34277 . - . ID=gene-PHA56_RS32115;Name=PHA56_RS32115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS32115;old_locus_tag=PHA56_32110 NZ_CP116219.1 Protein Homology CDS 33723 34277 . - 0 ID=cds-WP_014907826.1;Parent=gene-PHA56_RS32115;Dbxref=Genbank:WP_014907826.1;Name=WP_014907826.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014228885.1;locus_tag=PHA56_RS32115;product=toxin YdaT family protein;protein_id=WP_014907826.1;transl_table=11 NZ_CP116219.1 RefSeq gene 34280 34495 . - . ID=gene-PHA56_RS32120;Name=PHA56_RS32120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS32120;old_locus_tag=PHA56_32115 NZ_CP116219.1 Protein Homology CDS 34280 34495 . - 0 ID=cds-WP_012542199.1;Parent=gene-PHA56_RS32120;Dbxref=Genbank:WP_012542199.1;Name=WP_012542199.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004139461.1;locus_tag=PHA56_RS32120;product=Cro/CI family transcriptional regulator;protein_id=WP_012542199.1;transl_table=11 NZ_CP116219.1 RefSeq gene 34597 34986 . + . ID=gene-PHA56_RS32125;Name=PHA56_RS32125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS32125;old_locus_tag=PHA56_32120 NZ_CP116219.1 Protein Homology CDS 34597 34986 . + 0 ID=cds-WP_012542200.1;Parent=gene-PHA56_RS32125;Dbxref=Genbank:WP_012542200.1;Name=WP_012542200.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012542200.1;locus_tag=PHA56_RS32125;product=helix-turn-helix domain-containing protein;protein_id=WP_012542200.1;transl_table=11 NZ_CP116219.1 RefSeq gene 35286 35408 . + . ID=gene-PHA56_RS32130;Name=PHA56_RS32130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS32130;old_locus_tag=PHA56_32125 NZ_CP116219.1 GeneMarkS-2+ CDS 35286 35408 . + 0 ID=cds-WP_014228882.1;Parent=gene-PHA56_RS32130;Dbxref=Genbank:WP_014228882.1;Name=WP_014228882.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PHA56_RS32130;product=hypothetical protein;protein_id=WP_014228882.1;transl_table=11 NZ_CP116219.1 RefSeq gene 35829 36023 . + . ID=gene-PHA56_RS32135;Name=PHA56_RS32135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS32135;old_locus_tag=PHA56_32130 NZ_CP116219.1 Protein Homology CDS 35829 36023 . + 0 ID=cds-WP_021462581.1;Parent=gene-PHA56_RS32135;Dbxref=Genbank:WP_021462581.1;Name=WP_021462581.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020803219.1;locus_tag=PHA56_RS32135;product=DUF1482 family protein;protein_id=WP_021462581.1;transl_table=11 NZ_CP116219.1 RefSeq gene 36066 36410 . + . ID=gene-PHA56_RS32140;Name=PHA56_RS32140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS32140;old_locus_tag=PHA56_32135 NZ_CP116219.1 Protein Homology CDS 36066 36410 . + 0 ID=cds-WP_021462580.1;Parent=gene-PHA56_RS32140;Dbxref=Genbank:WP_021462580.1;Name=WP_021462580.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020315083.1;locus_tag=PHA56_RS32140;product=Rrf2 family transcriptional regulator;protein_id=WP_021462580.1;transl_table=11 NZ_CP116219.1 RefSeq gene 36552 38690 . + . ID=gene-PHA56_RS32145;Name=PHA56_RS32145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS32145;old_locus_tag=PHA56_32140 NZ_CP116219.1 Protein Homology CDS 36552 38690 . + 0 ID=cds-WP_117240112.1;Parent=gene-PHA56_RS32145;Dbxref=Genbank:WP_117240112.1;Name=WP_117240112.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004147979.1;locus_tag=PHA56_RS32145;product=exonuclease;protein_id=WP_117240112.1;transl_table=11 NZ_CP116219.1 RefSeq gene 38743 38988 . + . ID=gene-PHA56_RS32150;Name=PHA56_RS32150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS32150;old_locus_tag=PHA56_32145 NZ_CP116219.1 Protein Homology CDS 38743 38988 . + 0 ID=cds-WP_012542206.1;Parent=gene-PHA56_RS32150;Dbxref=Genbank:WP_012542206.1;Name=WP_012542206.1;Ontology_term=GO:0006310,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012542206.1;locus_tag=PHA56_RS32150;product=excisionase;protein_id=WP_012542206.1;transl_table=11 NZ_CP116219.1 RefSeq gene 38969 40096 . + . ID=gene-PHA56_RS32155;Name=PHA56_RS32155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS32155;old_locus_tag=PHA56_32150 NZ_CP116219.1 Protein Homology CDS 38969 40096 . + 0 ID=cds-WP_017898966.1;Parent=gene-PHA56_RS32155;Dbxref=Genbank:WP_017898966.1;Name=WP_017898966.1;Ontology_term=GO:0015074,GO:0003677,GO:0008907;gbkey=CDS;go_function=DNA binding|0003677||IEA,integrase activity|0008907||IEA;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415658.1;locus_tag=PHA56_RS32155;product=site-specific integrase;protein_id=WP_017898966.1;transl_table=11 NZ_CP116219.1 RefSeq pseudogene 40214 40381 . - . ID=gene-PHA56_RS32160;Name=PHA56_RS32160;end_range=40381,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS32160;old_locus_tag=PHA56_32155;partial=true;pseudo=true NZ_CP116219.1 Protein Homology CDS 40214 40381 . - 0 ID=cds-PHA56_RS32160;Parent=gene-PHA56_RS32160;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0016616;end_range=40381,.;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000444467.1;locus_tag=PHA56_RS32160;partial=true;product=isocitrate/isopropylmalate family dehydrogenase;pseudo=true;transl_table=11 NZ_CP116219.1 RefSeq gene 40687 41010 . - . ID=gene-PHA56_RS32165;Name=PHA56_RS32165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS32165;old_locus_tag=PHA56_32160 NZ_CP116219.1 Protein Homology CDS 40687 41010 . - 0 ID=cds-WP_014228924.1;Parent=gene-PHA56_RS32165;Dbxref=Genbank:WP_014228924.1;Name=WP_014228924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014228924.1;locus_tag=PHA56_RS32165;product=hypothetical protein;protein_id=WP_014228924.1;transl_table=11 NZ_CP116219.1 RefSeq gene 41016 41708 . - . ID=gene-PHA56_RS32170;Name=PHA56_RS32170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS32170;old_locus_tag=PHA56_32165 NZ_CP116219.1 Protein Homology CDS 41016 41708 . - 0 ID=cds-WP_014228923.1;Parent=gene-PHA56_RS32170;Dbxref=Genbank:WP_014228923.1;Name=WP_014228923.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004224167.1;locus_tag=PHA56_RS32170;product=EAL domain-containing protein;protein_id=WP_014228923.1;transl_table=11 NZ_CP116219.1 RefSeq gene 42068 43126 . - . ID=gene-PHA56_RS32175;Name=PHA56_RS32175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS32175;old_locus_tag=PHA56_32170 NZ_CP116219.1 Protein Homology CDS 42068 43126 . - 0 ID=cds-WP_020317995.1;Parent=gene-PHA56_RS32175;Dbxref=Genbank:WP_020317995.1;Name=WP_020317995.1;Ontology_term=GO:0009966,GO:0009975;gbkey=CDS;go_function=cyclase activity|0009975||IEA;go_process=regulation of signal transduction|0009966||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004131484.1;locus_tag=PHA56_RS32175;product=sensor domain-containing diguanylate cyclase;protein_id=WP_020317995.1;transl_table=11 NZ_CP116219.1 RefSeq gene 43549 44976 . - . ID=gene-PHA56_RS32180;Name=PHA56_RS32180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS32180;old_locus_tag=PHA56_32175 NZ_CP116219.1 Protein Homology CDS 43549 44976 . - 0 ID=cds-WP_014907806.1;Parent=gene-PHA56_RS32180;Dbxref=Genbank:WP_014907806.1;Name=WP_014907806.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014228921.1;locus_tag=PHA56_RS32180;product=tail fiber domain-containing protein;protein_id=WP_014907806.1;transl_table=11 NZ_CP116219.1 RefSeq gene 45045 57749 . - . ID=gene-PHA56_RS31915;Name=PHA56_RS31915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31915;old_locus_tag=PHA56_31910 NZ_CP116219.1 Protein Homology CDS 45045 57749 . - 0 ID=cds-WP_208787265.1;Parent=gene-PHA56_RS31915;Dbxref=Genbank:WP_208787265.1;Name=WP_208787265.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014228920.1;locus_tag=PHA56_RS31915;product=DUF1983 domain-containing protein;protein_id=WP_208787265.1;transl_table=11 ##sequence-region NZ_CP116218.1 1 54035 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1134687 NZ_CP116218.1 RefSeq region 1 54035 . + . ID=NZ_CP116218.1:1..54035;Dbxref=taxon:1134687;Is_circular=true;Name=p2562_NDM;collection-date=2018;country=China: Hangzhou;gbkey=Src;genome=plasmid;isolation-source=sputum;mol_type=genomic DNA;nat-host=Homo sapiens;plasmid-name=p2562_NDM;strain=2563 NZ_CP116218.1 RefSeq gene 320 646 . - . ID=gene-PHA56_RS31565;Name=PHA56_RS31565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31565;old_locus_tag=PHA56_31565 NZ_CP116218.1 Protein Homology CDS 320 646 . - 0 ID=cds-WP_004208538.1;Parent=gene-PHA56_RS31565;Dbxref=Genbank:WP_004208538.1;Name=WP_004208538.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004208538.1;locus_tag=PHA56_RS31565;product=hypothetical protein;protein_id=WP_004208538.1;transl_table=11 NZ_CP116218.1 RefSeq gene 732 1046 . - . ID=gene-PHA56_RS31570;Name=PHA56_RS31570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31570;old_locus_tag=PHA56_31570 NZ_CP116218.1 Protein Homology CDS 732 1046 . - 0 ID=cds-WP_000754496.1;Parent=gene-PHA56_RS31570;Dbxref=Genbank:WP_000754496.1;Name=WP_000754496.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000754496.1;locus_tag=PHA56_RS31570;product=TrbM/KikA/MpfK family conjugal transfer protein;protein_id=WP_000754496.1;transl_table=11 NZ_CP116218.1 RefSeq gene 1134 1526 . - . ID=gene-PHA56_RS31575;Name=PHA56_RS31575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31575;old_locus_tag=PHA56_31575 NZ_CP116218.1 Protein Homology CDS 1134 1526 . - 0 ID=cds-WP_000738524.1;Parent=gene-PHA56_RS31575;Dbxref=Genbank:WP_000738524.1;Name=WP_000738524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000738524.1;locus_tag=PHA56_RS31575;product=cag pathogenicity island Cag12 family protein;protein_id=WP_000738524.1;transl_table=11 NZ_CP116218.1 RefSeq gene 1523 3358 . - . ID=gene-PHA56_RS31580;Name=PHA56_RS31580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31580;old_locus_tag=PHA56_31580 NZ_CP116218.1 Protein Homology CDS 1523 3358 . - 0 ID=cds-WP_000053822.1;Parent=gene-PHA56_RS31580;Dbxref=Genbank:WP_000053822.1;Name=WP_000053822.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000053816.1;locus_tag=PHA56_RS31580;product=type IV secretory system conjugative DNA transfer family protein;protein_id=WP_000053822.1;transl_table=11 NZ_CP116218.1 RefSeq gene 3361 4395 . - . ID=gene-PHA56_RS31585;Name=virB11;gbkey=Gene;gene=virB11;gene_biotype=protein_coding;locus_tag=PHA56_RS31585;old_locus_tag=PHA56_31585 NZ_CP116218.1 Protein Homology CDS 3361 4395 . - 0 ID=cds-WP_000650512.1;Parent=gene-PHA56_RS31585;Dbxref=Genbank:WP_000650512.1;Name=WP_000650512.1;Ontology_term=GO:0044097,GO:0043684;gbkey=CDS;gene=virB11;go_component=type IV secretion system complex|0043684||IEA;go_process=secretion by the type IV secretion system|0044097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001549925.1;locus_tag=PHA56_RS31585;product=P-type DNA transfer ATPase VirB11;protein_id=WP_000650512.1;transl_table=11 NZ_CP116218.1 RefSeq gene 4392 4589 . - . ID=gene-PHA56_RS31590;Name=PHA56_RS31590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31590;old_locus_tag=PHA56_31590 NZ_CP116218.1 Protein Homology CDS 4392 4589 . - 0 ID=cds-WP_000629109.1;Parent=gene-PHA56_RS31590;Dbxref=Genbank:WP_000629109.1;Name=WP_000629109.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000629109.1;locus_tag=PHA56_RS31590;product=DNA-binding protein;protein_id=WP_000629109.1;transl_table=11 NZ_CP116218.1 RefSeq gene 4591 5805 . - . ID=gene-PHA56_RS31595;Name=virB10;gbkey=Gene;gene=virB10;gene_biotype=protein_coding;locus_tag=PHA56_RS31595;old_locus_tag=PHA56_31595 NZ_CP116218.1 Protein Homology CDS 4591 5805 . - 0 ID=cds-WP_001295060.1;Parent=gene-PHA56_RS31595;Dbxref=Genbank:WP_001295060.1;Name=WP_001295060.1;gbkey=CDS;gene=virB10;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001295060.1;locus_tag=PHA56_RS31595;product=VirB10/TraB/TrbI family type IV secretion system protein;protein_id=WP_001295060.1;transl_table=11 NZ_CP116218.1 RefSeq gene 5802 6731 . - . ID=gene-PHA56_RS31600;Name=PHA56_RS31600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31600;old_locus_tag=PHA56_31600 NZ_CP116218.1 Protein Homology CDS 5802 6731 . - 0 ID=cds-WP_000783386.1;Parent=gene-PHA56_RS31600;Dbxref=Genbank:WP_000783386.1;Name=WP_000783386.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000783379.1;locus_tag=PHA56_RS31600;product=TrbG/VirB9 family P-type conjugative transfer protein;protein_id=WP_000783386.1;transl_table=11 NZ_CP116218.1 RefSeq gene 6737 7465 . - . ID=gene-PHA56_RS31605;Name=PHA56_RS31605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31605;old_locus_tag=PHA56_31605 NZ_CP116218.1 Protein Homology CDS 6737 7465 . - 0 ID=cds-WP_004199085.1;Parent=gene-PHA56_RS31605;Dbxref=Genbank:WP_004199085.1;Name=WP_004199085.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004199085.1;locus_tag=PHA56_RS31605;product=type IV secretion system protein;protein_id=WP_004199085.1;transl_table=11 NZ_CP116218.1 RefSeq gene 7660 8715 . - . ID=gene-PHA56_RS31610;Name=PHA56_RS31610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31610;old_locus_tag=PHA56_31610 NZ_CP116218.1 Protein Homology CDS 7660 8715 . - 0 ID=cds-WP_000235886.1;Parent=gene-PHA56_RS31610;Dbxref=Genbank:WP_000235886.1;Name=WP_000235886.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001549919.1;locus_tag=PHA56_RS31610;product=type IV secretion system protein;protein_id=WP_000235886.1;transl_table=11 NZ_CP116218.1 RefSeq gene 8727 8984 . - . ID=gene-PHA56_RS31615;Name=PHA56_RS31615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31615;old_locus_tag=PHA56_31615 NZ_CP116218.1 Protein Homology CDS 8727 8984 . - 0 ID=cds-WP_000759841.1;Parent=gene-PHA56_RS31615;Dbxref=Genbank:WP_000759841.1;Name=WP_000759841.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000759841.1;locus_tag=PHA56_RS31615;product=EexN family lipoprotein;protein_id=WP_000759841.1;transl_table=11 NZ_CP116218.1 RefSeq gene 8994 9764 . - . ID=gene-PHA56_RS31620;Name=PHA56_RS31620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31620;old_locus_tag=PHA56_31620 NZ_CP116218.1 Protein Homology CDS 8994 9764 . - 0 ID=cds-WP_000716326.1;Parent=gene-PHA56_RS31620;Dbxref=Genbank:WP_000716326.1;Name=WP_000716326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001549917.1;locus_tag=PHA56_RS31620;product=type IV secretion system protein;protein_id=WP_000716326.1;transl_table=11 NZ_CP116218.1 RefSeq gene 9774 12527 . - . ID=gene-PHA56_RS31625;Name=PHA56_RS31625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31625;old_locus_tag=PHA56_31625 NZ_CP116218.1 Protein Homology CDS 9774 12527 . - 0 ID=cds-WP_015060057.1;Parent=gene-PHA56_RS31625;Dbxref=Genbank:WP_015060057.1;Name=WP_015060057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016247738.1;locus_tag=PHA56_RS31625;product=VirB3 family type IV secretion system protein;protein_id=WP_015060057.1;transl_table=11 NZ_CP116218.1 RefSeq gene 12552 12842 . - . ID=gene-PHA56_RS31630;Name=PHA56_RS31630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31630;old_locus_tag=PHA56_31630 NZ_CP116218.1 Protein Homology CDS 12552 12842 . - 0 ID=cds-WP_000916156.1;Parent=gene-PHA56_RS31630;Dbxref=Genbank:WP_000916156.1;Name=WP_000916156.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000916156.1;locus_tag=PHA56_RS31630;product=TrbC/VirB2 family protein;protein_id=WP_000916156.1;transl_table=11 NZ_CP116218.1 RefSeq gene 12826 13470 . - . ID=gene-PHA56_RS31635;Name=PHA56_RS31635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31635;old_locus_tag=PHA56_31635 NZ_CP116218.1 Protein Homology CDS 12826 13470 . - 0 ID=cds-WP_000953538.1;Parent=gene-PHA56_RS31635;Dbxref=Genbank:WP_000953538.1;Name=WP_000953538.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001549915.1;locus_tag=PHA56_RS31635;product=lytic transglycosylase domain-containing protein;protein_id=WP_000953538.1;transl_table=11 NZ_CP116218.1 RefSeq gene 13516 13752 . - . ID=gene-PHA56_RS31640;Name=PHA56_RS31640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31640;old_locus_tag=PHA56_31640 NZ_CP116218.1 Protein Homology CDS 13516 13752 . - 0 ID=cds-WP_001348696.1;Parent=gene-PHA56_RS31640;Dbxref=Genbank:WP_001348696.1;Name=WP_001348696.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001348696.1;locus_tag=PHA56_RS31640;product=hypothetical protein;protein_id=WP_001348696.1;transl_table=11 NZ_CP116218.1 RefSeq gene 13703 14212 . - . ID=gene-PHA56_RS31645;Name=PHA56_RS31645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31645;old_locus_tag=PHA56_31645 NZ_CP116218.1 Protein Homology CDS 13703 14212 . - 0 ID=cds-WP_000455437.1;Parent=gene-PHA56_RS31645;Dbxref=Genbank:WP_000455437.1;Name=WP_000455437.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000455437.1;locus_tag=PHA56_RS31645;product=transcription termination/antitermination NusG family protein;protein_id=WP_000455437.1;transl_table=11 NZ_CP116218.1 RefSeq gene 14565 15725 . - . ID=gene-PHA56_RS31650;Name=PHA56_RS31650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31650;old_locus_tag=PHA56_31650 NZ_CP116218.1 Protein Homology CDS 14565 15725 . - 0 ID=cds-WP_004199101.1;Parent=gene-PHA56_RS31650;Dbxref=Genbank:WP_004199101.1;Name=WP_004199101.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001549912.1;locus_tag=PHA56_RS31650;product=relaxase/mobilization nuclease domain-containing protein;protein_id=WP_004199101.1;transl_table=11 NZ_CP116218.1 RefSeq gene 15728 16273 . - . ID=gene-PHA56_RS31655;Name=PHA56_RS31655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31655;old_locus_tag=PHA56_31655 NZ_CP116218.1 Protein Homology CDS 15728 16273 . - 0 ID=cds-WP_001348698.1;Parent=gene-PHA56_RS31655;Dbxref=Genbank:WP_001348698.1;Name=WP_001348698.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000757693.1;locus_tag=PHA56_RS31655;product=hypothetical protein;protein_id=WP_001348698.1;transl_table=11 NZ_CP116218.1 RefSeq gene 16614 16871 . - . ID=gene-PHA56_RS31660;Name=PHA56_RS31660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31660;old_locus_tag=PHA56_31660 NZ_CP116218.1 Protein Homology CDS 16614 16871 . - 0 ID=cds-WP_004199355.1;Parent=gene-PHA56_RS31660;Dbxref=Genbank:WP_004199355.1;Name=WP_004199355.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001549910.1;locus_tag=PHA56_RS31660;product=hypothetical protein;protein_id=WP_004199355.1;transl_table=11 NZ_CP116218.1 RefSeq gene 16868 17032 . - . ID=gene-PHA56_RS31665;Name=PHA56_RS31665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31665;old_locus_tag=PHA56_31665 NZ_CP116218.1 Protein Homology CDS 16868 17032 . - 0 ID=cds-WP_000004083.1;Parent=gene-PHA56_RS31665;Dbxref=Genbank:WP_000004083.1;Name=WP_000004083.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000004083.1;locus_tag=PHA56_RS31665;product=hypothetical protein;protein_id=WP_000004083.1;transl_table=11 NZ_CP116218.1 RefSeq gene 17107 17445 . - . ID=gene-PHA56_RS31670;Name=PHA56_RS31670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31670;old_locus_tag=PHA56_31670 NZ_CP116218.1 Protein Homology CDS 17107 17445 . - 0 ID=cds-WP_001099725.1;Parent=gene-PHA56_RS31670;Dbxref=Genbank:WP_001099725.1;Name=WP_001099725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001549908.1;locus_tag=PHA56_RS31670;product=hypothetical protein;protein_id=WP_001099725.1;transl_table=11 NZ_CP116218.1 RefSeq gene 17539 17781 . - . ID=gene-PHA56_RS31675;Name=PHA56_RS31675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31675;old_locus_tag=PHA56_31675 NZ_CP116218.1 Protein Homology CDS 17539 17781 . - 0 ID=cds-WP_000008707.1;Parent=gene-PHA56_RS31675;Dbxref=Genbank:WP_000008707.1;Name=WP_000008707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000008707.1;locus_tag=PHA56_RS31675;product=hypothetical protein;protein_id=WP_000008707.1;transl_table=11 NZ_CP116218.1 RefSeq gene 17771 18040 . - . ID=gene-PHA56_RS31680;Name=PHA56_RS31680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31680;old_locus_tag=PHA56_31680 NZ_CP116218.1 Protein Homology CDS 17771 18040 . - 0 ID=cds-WP_001006717.1;Parent=gene-PHA56_RS31680;Dbxref=Genbank:WP_001006717.1;Name=WP_001006717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001549907.1;locus_tag=PHA56_RS31680;product=hypothetical protein;protein_id=WP_001006717.1;transl_table=11 NZ_CP116218.1 RefSeq gene 18049 18600 . - . ID=gene-PHA56_RS31685;Name=PHA56_RS31685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31685;old_locus_tag=PHA56_31685 NZ_CP116218.1 Protein Homology CDS 18049 18600 . - 0 ID=cds-WP_000662998.1;Parent=gene-PHA56_RS31685;Dbxref=Genbank:WP_000662998.1;Name=WP_000662998.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001549906.1;locus_tag=PHA56_RS31685;product=hypothetical protein;protein_id=WP_000662998.1;transl_table=11 NZ_CP116218.1 RefSeq gene 18660 18896 . - . ID=gene-PHA56_RS31690;Name=PHA56_RS31690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31690;old_locus_tag=PHA56_31690 NZ_CP116218.1 Protein Homology CDS 18660 18896 . - 0 ID=cds-WP_000792381.1;Parent=gene-PHA56_RS31690;Dbxref=Genbank:WP_000792381.1;Name=WP_000792381.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006122499.1;locus_tag=PHA56_RS31690;product=hypothetical protein;protein_id=WP_000792381.1;transl_table=11 NZ_CP116218.1 RefSeq gene 18955 19470 . - . ID=gene-PHA56_RS31695;Name=PHA56_RS31695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31695;old_locus_tag=PHA56_31695 NZ_CP116218.1 Protein Homology CDS 18955 19470 . - 0 ID=cds-WP_001025390.1;Parent=gene-PHA56_RS31695;Dbxref=Genbank:WP_001025390.1;Name=WP_001025390.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001025391.1;locus_tag=PHA56_RS31695;product=DnaJ domain-containing protein;protein_id=WP_001025390.1;transl_table=11 NZ_CP116218.1 RefSeq pseudogene 20060 20212 . - . ID=gene-PHA56_RS31700;Name=PHA56_RS31700;end_range=20212,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS31700;old_locus_tag=PHA56_31700;partial=true;pseudo=true NZ_CP116218.1 Protein Homology CDS 20060 20212 . - 0 ID=cds-PHA56_RS31700;Parent=gene-PHA56_RS31700;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=20212,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000127484.1;locus_tag=PHA56_RS31700;partial=true;product=DNA-binding protein;pseudo=true;transl_table=11 NZ_CP116218.1 RefSeq gene 20823 21836 . + . ID=gene-PHA56_RS31705;Name=PHA56_RS31705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31705;old_locus_tag=PHA56_31705 NZ_CP116218.1 Protein Homology CDS 20823 21836 . + 0 ID=cds-WP_001348704.1;Parent=gene-PHA56_RS31705;Dbxref=Genbank:WP_001348704.1;Name=WP_001348704.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001348704.1;locus_tag=PHA56_RS31705;product=replication initiation protein;protein_id=WP_001348704.1;transl_table=11 NZ_CP116218.1 RefSeq gene 21845 22288 . + . ID=gene-PHA56_RS31710;Name=PHA56_RS31710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31710;old_locus_tag=PHA56_31710 NZ_CP116218.1 Protein Homology CDS 21845 22288 . + 0 ID=cds-WP_001074369.1;Parent=gene-PHA56_RS31710;Dbxref=Genbank:WP_001074369.1;Name=WP_001074369.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001074369.1;locus_tag=PHA56_RS31710;product=hypothetical protein;protein_id=WP_001074369.1;transl_table=11 NZ_CP116218.1 RefSeq gene 22476 22829 . + . ID=gene-PHA56_RS31715;Name=PHA56_RS31715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31715;old_locus_tag=PHA56_31715 NZ_CP116218.1 Protein Homology CDS 22476 22829 . + 0 ID=cds-WP_000877224.1;Parent=gene-PHA56_RS31715;Dbxref=Genbank:WP_000877224.1;Name=WP_000877224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000202950.1;locus_tag=PHA56_RS31715;product=hypothetical protein;protein_id=WP_000877224.1;transl_table=11 NZ_CP116218.1 RefSeq gene 22850 23134 . - . ID=gene-PHA56_RS31720;Name=PHA56_RS31720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31720;old_locus_tag=PHA56_31720 NZ_CP116218.1 Protein Homology CDS 22850 23134 . - 0 ID=cds-WP_001043731.1;Parent=gene-PHA56_RS31720;Dbxref=Genbank:WP_001043731.1;Name=WP_001043731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001043731.1;locus_tag=PHA56_RS31720;product=hypothetical protein;protein_id=WP_001043731.1;transl_table=11 NZ_CP116218.1 RefSeq gene 23170 23481 . - . ID=gene-PHA56_RS31725;Name=PHA56_RS31725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31725;old_locus_tag=PHA56_31725 NZ_CP116218.1 Protein Homology CDS 23170 23481 . - 0 ID=cds-WP_000469598.1;Parent=gene-PHA56_RS31725;Dbxref=Genbank:WP_000469598.1;Name=WP_000469598.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000469598.1;locus_tag=PHA56_RS31725;product=hypothetical protein;protein_id=WP_000469598.1;transl_table=11 NZ_CP116218.1 RefSeq gene 23687 23971 . - . ID=gene-PHA56_RS31730;Name=PHA56_RS31730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31730;old_locus_tag=PHA56_31730 NZ_CP116218.1 Protein Homology CDS 23687 23971 . - 0 ID=cds-WP_001185481.1;Parent=gene-PHA56_RS31730;Dbxref=Genbank:WP_001185481.1;Name=WP_001185481.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001371664.1;locus_tag=PHA56_RS31730;product=hypothetical protein;protein_id=WP_001185481.1;transl_table=11 NZ_CP116218.1 RefSeq gene 24071 24733 . - . ID=gene-PHA56_RS31735;Name=PHA56_RS31735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31735;old_locus_tag=PHA56_31735 NZ_CP116218.1 Protein Homology CDS 24071 24733 . - 0 ID=cds-WP_000516402.1;Parent=gene-PHA56_RS31735;Dbxref=Genbank:WP_000516402.1;Name=WP_000516402.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000516401.1;locus_tag=PHA56_RS31735;product=division plane positioning ATPase MipZ;protein_id=WP_000516402.1;transl_table=11 NZ_CP116218.1 RefSeq gene 25114 25776 . + . ID=gene-PHA56_RS31740;Name=PHA56_RS31740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31740;old_locus_tag=PHA56_31740 NZ_CP116218.1 Protein Homology CDS 25114 25776 . + 0 ID=cds-WP_001549893.1;Parent=gene-PHA56_RS31740;Dbxref=Genbank:WP_001549893.1;Name=WP_001549893.1;Ontology_term=GO:0006310,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001549893.1;locus_tag=PHA56_RS31740;product=recombinase family protein;protein_id=WP_001549893.1;transl_table=11 NZ_CP116218.1 RefSeq gene 25865 27085 . - . ID=gene-PHA56_RS31745;Name=PHA56_RS31745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31745;old_locus_tag=PHA56_31745 NZ_CP116218.1 Protein Homology CDS 25865 27085 . - 0 ID=cds-WP_000343760.1-2;Parent=gene-PHA56_RS31745;Dbxref=Genbank:WP_000343760.1;Name=WP_000343760.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343760.1;locus_tag=PHA56_RS31745;product=ISL3-like element ISKox3 family transposase;protein_id=WP_000343760.1;transl_table=11 NZ_CP116218.1 RefSeq gene 27187 27426 . + . ID=gene-PHA56_RS31750;Name=PHA56_RS31750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31750;old_locus_tag=PHA56_31750 NZ_CP116218.1 Protein Homology CDS 27187 27426 . + 0 ID=cds-WP_001549892.1;Parent=gene-PHA56_RS31750;Dbxref=Genbank:WP_001549892.1;Name=WP_001549892.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001549892.1;locus_tag=PHA56_RS31750;product=hypothetical protein;protein_id=WP_001549892.1;transl_table=11 NZ_CP116218.1 RefSeq gene 27429 27785 . + . ID=gene-PHA56_RS31755;Name=PHA56_RS31755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31755;old_locus_tag=PHA56_31755 NZ_CP116218.1 Protein Homology CDS 27429 27785 . + 0 ID=cds-WP_004199403.1;Parent=gene-PHA56_RS31755;Dbxref=Genbank:WP_004199403.1;Name=WP_004199403.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012920.2;locus_tag=PHA56_RS31755;product=hypothetical protein;protein_id=WP_004199403.1;transl_table=11 NZ_CP116218.1 RefSeq gene 27819 28523 . - . ID=gene-PHA56_RS31760;Name=PHA56_RS31760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31760;old_locus_tag=PHA56_31760 NZ_CP116218.1 Protein Homology CDS 27819 28523 . - 0 ID=cds-WP_001067855.1-13;Parent=gene-PHA56_RS31760;Dbxref=Genbank:WP_001067855.1;Name=WP_001067855.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221000.1;locus_tag=PHA56_RS31760;product=IS6-like element IS26 family transposase;protein_id=WP_001067855.1;transl_table=11 NZ_CP116218.1 RefSeq pseudogene 28578 29102 . - . ID=gene-PHA56_RS31765;Name=PHA56_RS31765;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS31765;old_locus_tag=PHA56_31765;partial=true;pseudo=true;start_range=.,28578 NZ_CP116218.1 Protein Homology CDS 28578 29102 . - 0 ID=cds-PHA56_RS31765;Parent=gene-PHA56_RS31765;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226820.1;locus_tag=PHA56_RS31765;partial=true;product=NAD(P)-dependent oxidoreductase;pseudo=true;start_range=.,28578;transl_table=11 NZ_CP116218.1 RefSeq gene 29364 30125 . + . ID=gene-PHA56_RS31770;Name=PHA56_RS31770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31770;old_locus_tag=PHA56_31770 NZ_CP116218.1 Protein Homology CDS 29364 30125 . + 0 ID=cds-WP_002210513.1;Parent=gene-PHA56_RS31770;Dbxref=Genbank:WP_002210513.1;Name=WP_002210513.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226821.1;locus_tag=PHA56_RS31770;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_002210513.1;transl_table=11 NZ_CP116218.1 RefSeq gene 30146 31006 . - . ID=gene-PHA56_RS31775;Name=PHA56_RS31775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31775;old_locus_tag=PHA56_31775 NZ_CP116218.1 Protein Homology CDS 30146 31006 . - 0 ID=cds-WP_002904004.1;Parent=gene-PHA56_RS31775;Dbxref=Genbank:WP_002904004.1;Name=WP_002904004.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001620095.1;locus_tag=PHA56_RS31775;product=extended-spectrum class A beta-lactamase SHV-12;protein_id=WP_002904004.1;transl_table=11 NZ_CP116218.1 RefSeq gene 31143 31847 . + . ID=gene-PHA56_RS31780;Name=PHA56_RS31780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31780;old_locus_tag=PHA56_31780 NZ_CP116218.1 Protein Homology CDS 31143 31847 . + 0 ID=cds-WP_001067855.1-14;Parent=gene-PHA56_RS31780;Dbxref=Genbank:WP_001067855.1;Name=WP_001067855.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221000.1;locus_tag=PHA56_RS31780;product=IS6-like element IS26 family transposase;protein_id=WP_001067855.1;transl_table=11 NZ_CP116218.1 RefSeq pseudogene 31877 32107 . + . ID=gene-PHA56_RS31785;Name=PHA56_RS31785;end_range=32107,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS31785;old_locus_tag=PHA56_31785;partial=true;pseudo=true NZ_CP116218.1 Protein Homology CDS 31877 32107 . + 0 ID=cds-PHA56_RS31785;Parent=gene-PHA56_RS31785;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=32107,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005210962.1;locus_tag=PHA56_RS31785;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP116218.1 RefSeq gene 32363 33856 . - . ID=gene-PHA56_RS31790;Name=PHA56_RS31790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31790;old_locus_tag=PHA56_31790 NZ_CP116218.1 Protein Homology CDS 32363 33856 . - 0 ID=cds-WP_043907034.1;Parent=gene-PHA56_RS31790;Dbxref=Genbank:WP_043907034.1;Name=WP_043907034.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001137772.1;locus_tag=PHA56_RS31790;product=IS91 family transposase;protein_id=WP_043907034.1;transl_table=11 NZ_CP116218.1 RefSeq gene 34081 35721 . - . ID=gene-PHA56_RS31795;Name=groL;gbkey=Gene;gene=groL;gene_biotype=protein_coding;locus_tag=PHA56_RS31795;old_locus_tag=PHA56_31795 NZ_CP116218.1 Protein Homology CDS 34081 35721 . - 0 ID=cds-WP_004201176.1;Parent=gene-PHA56_RS31795;Dbxref=Genbank:WP_004201176.1;Name=WP_004201176.1;Note=60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds;Ontology_term=GO:0006457,GO:0005515,GO:0016887;gbkey=CDS;gene=groL;go_function=protein binding|0005515||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005411226.1;locus_tag=PHA56_RS31795;product=chaperonin GroEL;protein_id=WP_004201176.1;transl_table=11 NZ_CP116218.1 RefSeq gene 35777 36067 . - . ID=gene-PHA56_RS31800;Name=groES;gbkey=Gene;gene=groES;gene_biotype=protein_coding;locus_tag=PHA56_RS31800;old_locus_tag=PHA56_31800 NZ_CP116218.1 Protein Homology CDS 35777 36067 . - 0 ID=cds-WP_004201172.1;Parent=gene-PHA56_RS31800;Dbxref=Genbank:WP_004201172.1;Name=WP_004201172.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887;gbkey=CDS;gene=groES;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013534102.1;locus_tag=PHA56_RS31800;product=co-chaperone GroES;protein_id=WP_004201172.1;transl_table=11 NZ_CP116218.1 RefSeq gene 36261 36590 . + . ID=gene-PHA56_RS31805;Name=PHA56_RS31805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31805;old_locus_tag=PHA56_31805 NZ_CP116218.1 Protein Homology CDS 36261 36590 . + 0 ID=cds-WP_004201171.1;Parent=gene-PHA56_RS31805;Dbxref=Genbank:WP_004201171.1;Name=WP_004201171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004201171.1;locus_tag=PHA56_RS31805;product=divalent-cation tolerance protein CutA;protein_id=WP_004201171.1;transl_table=11 NZ_CP116218.1 RefSeq pseudogene 36595 36969 . + . ID=gene-PHA56_RS31810;Name=PHA56_RS31810;end_range=36969,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS31810;old_locus_tag=PHA56_31810;partial=true;pseudo=true NZ_CP116218.1 Protein Homology CDS 36595 36969 . + 0 ID=cds-PHA56_RS31810;Parent=gene-PHA56_RS31810;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=36969,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022853.2;locus_tag=PHA56_RS31810;partial=true;product=protein-disulfide reductase DsbD family protein;pseudo=true;transl_table=11 NZ_CP116218.1 RefSeq pseudogene 37069 37626 . + . ID=gene-PHA56_RS31815;Name=PHA56_RS31815;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS31815;old_locus_tag=PHA56_31815;partial=true;pseudo=true;start_range=.,37069 NZ_CP116218.1 Protein Homology CDS 37069 37626 . + 0 ID=cds-PHA56_RS31815;Parent=gene-PHA56_RS31815;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006399920.1;locus_tag=PHA56_RS31815;partial=true;product=twin-arginine translocation (TAT) pathway signal sequence domain protein;pseudo=true;start_range=.,37069;transl_table=11 NZ_CP116218.1 RefSeq gene 37637 38275 . - . ID=gene-PHA56_RS31820;Name=PHA56_RS31820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31820;old_locus_tag=PHA56_31820 NZ_CP116218.1 Protein Homology CDS 37637 38275 . - 0 ID=cds-WP_004201168.1;Parent=gene-PHA56_RS31820;Dbxref=Genbank:WP_004201168.1;Name=WP_004201168.1;Ontology_term=GO:0000162,GO:0004640;gbkey=CDS;go_function=phosphoribosylanthranilate isomerase activity|0004640||IEA;go_process=tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004201168.1;locus_tag=PHA56_RS31820;product=phosphoribosylanthranilate isomerase;protein_id=WP_004201168.1;transl_table=11 NZ_CP116218.1 RefSeq gene 38280 38645 . - . ID=gene-PHA56_RS31825;Name=ble;gbkey=Gene;gene=ble;gene_biotype=protein_coding;locus_tag=PHA56_RS31825;old_locus_tag=PHA56_31825 NZ_CP116218.1 Protein Homology CDS 38280 38645 . - 0 ID=cds-WP_004201167.1;Parent=gene-PHA56_RS31825;Dbxref=Genbank:WP_004201167.1;Name=WP_004201167.1;gbkey=CDS;gene=ble;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004201167.1;locus_tag=PHA56_RS31825;product=bleomycin binding protein Ble-MBL;protein_id=WP_004201167.1;transl_table=11 NZ_CP116218.1 RefSeq gene 38649 39461 . - . ID=gene-PHA56_RS31830;Name=PHA56_RS31830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31830;old_locus_tag=PHA56_31830 NZ_CP116218.1 Protein Homology CDS 38649 39461 . - 0 ID=cds-WP_004201164.1;Parent=gene-PHA56_RS31830;Dbxref=Genbank:WP_004201164.1;Name=WP_004201164.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032492661.1;locus_tag=PHA56_RS31830;product=subclass B1 metallo-beta-lactamase NDM-1;protein_id=WP_004201164.1;transl_table=11 NZ_CP116218.1 RefSeq pseudogene 39562 39753 . - . ID=gene-PHA56_RS31835;Name=PHA56_RS31835;end_range=39753,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS31835;old_locus_tag=PHA56_31835;partial=true;pseudo=true NZ_CP116218.1 Protein Homology CDS 39562 39753 . - 0 ID=cds-PHA56_RS31835;Parent=gene-PHA56_RS31835;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=39753,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611607.1;locus_tag=PHA56_RS31835;partial=true;product=IS30 family transposase;pseudo=true;transl_table=11 NZ_CP116218.1 RefSeq gene 39875 40855 . - . ID=gene-PHA56_RS31840;Name=PHA56_RS31840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31840;old_locus_tag=PHA56_31840 NZ_CP116218.1 Protein Homology CDS 39875 40855 . - 0 ID=cds-WP_000019402.1;Parent=gene-PHA56_RS31840;Dbxref=Genbank:WP_000019402.1;Name=WP_000019402.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416498.2;locus_tag=PHA56_RS31840;product=IS5-like element IS5 family transposase;protein_id=WP_000019402.1;transl_table=11 NZ_CP116218.1 RefSeq pseudogene 40923 41729 . - . ID=gene-PHA56_RS31845;Name=PHA56_RS31845;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS31845;old_locus_tag=PHA56_31845;partial=true;pseudo=true;start_range=.,40923 NZ_CP116218.1 Protein Homology CDS 40923 41729 . - 0 ID=cds-PHA56_RS31845;Parent=gene-PHA56_RS31845;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611607.1;locus_tag=PHA56_RS31845;partial=true;product=IS30-like element ISAba125 family transposase;pseudo=true;start_range=.,40923;transl_table=11 NZ_CP116218.1 RefSeq pseudogene 42006 45023 . - . ID=gene-PHA56_RS31850;Name=PHA56_RS31850;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS31850;old_locus_tag=PHA56_31850;pseudo=true NZ_CP116218.1 Protein Homology CDS 42006 45023 . - 0 ID=cds-PHA56_RS31850;Parent=gene-PHA56_RS31850;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032490160.1;locus_tag=PHA56_RS31850;product=Tn3-like element IS3000 family transposase;pseudo=true;transl_table=11 NZ_CP116218.1 RefSeq pseudogene 45167 45712 . + . ID=gene-PHA56_RS31855;Name=PHA56_RS31855;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA56_RS31855;old_locus_tag=PHA56_31855;partial=true;pseudo=true;start_range=.,45167 NZ_CP116218.1 Protein Homology CDS 45167 45712 . + 0 ID=cds-PHA56_RS31855;Parent=gene-PHA56_RS31855;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032495017.1;locus_tag=PHA56_RS31855;partial=true;product=Tn3 family transposase;pseudo=true;start_range=.,45167;transl_table=11 NZ_CP116218.1 RefSeq gene 45931 46026 . - . ID=gene-PHA56_RS31860;Name=dqlB;gbkey=Gene;gene=dqlB;gene_biotype=protein_coding;locus_tag=PHA56_RS31860 NZ_CP116218.1 Protein Homology CDS 45931 46026 . - 0 ID=cds-WP_000609145.1;Parent=gene-PHA56_RS31860;Dbxref=Genbank:WP_000609145.1;Name=WP_000609145.1;gbkey=CDS;gene=dqlB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000609149.1;locus_tag=PHA56_RS31860;product=hypothetical protein;protein_id=WP_000609145.1;transl_table=11 NZ_CP116218.1 RefSeq gene 46831 47109 . - . ID=gene-PHA56_RS31865;Name=PHA56_RS31865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31865;old_locus_tag=PHA56_31860 NZ_CP116218.1 Protein Homology CDS 46831 47109 . - 0 ID=cds-WP_001093608.1;Parent=gene-PHA56_RS31865;Dbxref=Genbank:WP_001093608.1;Name=WP_001093608.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001093608.1;locus_tag=PHA56_RS31865;product=hypothetical protein;protein_id=WP_001093608.1;transl_table=11 NZ_CP116218.1 RefSeq gene 47106 47381 . - . ID=gene-PHA56_RS31870;Name=PHA56_RS31870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31870;old_locus_tag=PHA56_31865 NZ_CP116218.1 Protein Homology CDS 47106 47381 . - 0 ID=cds-WP_000557557.1;Parent=gene-PHA56_RS31870;Dbxref=Genbank:WP_000557557.1;Name=WP_000557557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000557557.1;locus_tag=PHA56_RS31870;product=hypothetical protein;protein_id=WP_000557557.1;transl_table=11 NZ_CP116218.1 RefSeq gene 47399 47653 . - . ID=gene-PHA56_RS31875;Name=PHA56_RS31875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31875;old_locus_tag=PHA56_31870 NZ_CP116218.1 Protein Homology CDS 47399 47653 . - 0 ID=cds-WP_000510385.1;Parent=gene-PHA56_RS31875;Dbxref=Genbank:WP_000510385.1;Name=WP_000510385.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000510385.1;locus_tag=PHA56_RS31875;product=hypothetical protein;protein_id=WP_000510385.1;transl_table=11 NZ_CP116218.1 RefSeq gene 47763 48584 . - . ID=gene-PHA56_RS31880;Name=PHA56_RS31880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31880;old_locus_tag=PHA56_31875 NZ_CP116218.1 Protein Homology CDS 47763 48584 . - 0 ID=cds-WP_000196235.1;Parent=gene-PHA56_RS31880;Dbxref=Genbank:WP_000196235.1;Name=WP_000196235.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000196235.1;locus_tag=PHA56_RS31880;product=SprT-like domain-containing protein;protein_id=WP_000196235.1;transl_table=11 NZ_CP116218.1 RefSeq gene 48581 48760 . - . ID=gene-PHA56_RS31885;Name=PHA56_RS31885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31885;old_locus_tag=PHA56_31880 NZ_CP116218.1 Protein Homology CDS 48581 48760 . - 0 ID=cds-WP_000136657.1;Parent=gene-PHA56_RS31885;Dbxref=Genbank:WP_000136657.1;Name=WP_000136657.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000136657.1;locus_tag=PHA56_RS31885;product=hypothetical protein;protein_id=WP_000136657.1;transl_table=11 NZ_CP116218.1 RefSeq gene 48777 49043 . - . ID=gene-PHA56_RS31890;Name=PHA56_RS31890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31890;old_locus_tag=PHA56_31885 NZ_CP116218.1 GeneMarkS-2+ CDS 48777 49043 . - 0 ID=cds-WP_032072053.1;Parent=gene-PHA56_RS31890;Dbxref=Genbank:WP_032072053.1;Name=WP_032072053.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PHA56_RS31890;product=hypothetical protein;protein_id=WP_032072053.1;transl_table=11 NZ_CP116218.1 RefSeq gene 49033 49683 . + . ID=gene-PHA56_RS31895;Name=PHA56_RS31895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31895;old_locus_tag=PHA56_31890 NZ_CP116218.1 Protein Homology CDS 49033 49683 . + 0 ID=cds-WP_000351937.1;Parent=gene-PHA56_RS31895;Dbxref=Genbank:WP_000351937.1;Name=WP_000351937.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004242661.1;locus_tag=PHA56_RS31895;product=YkgJ family cysteine cluster protein;protein_id=WP_000351937.1;transl_table=11 NZ_CP116218.1 RefSeq gene 49721 50176 . - . ID=gene-PHA56_RS31900;Name=PHA56_RS31900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31900;old_locus_tag=PHA56_31895 NZ_CP116218.1 Protein Homology CDS 49721 50176 . - 0 ID=cds-WP_001293458.1;Parent=gene-PHA56_RS31900;Dbxref=Genbank:WP_001293458.1;Name=WP_001293458.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001549938.1;locus_tag=PHA56_RS31900;product=H-NS family nucleoid-associated regulatory protein;protein_id=WP_001293458.1;transl_table=11 NZ_CP116218.1 RefSeq gene 50188 52515 . - . ID=gene-PHA56_RS31905;Name=topB;gbkey=Gene;gene=topB;gene_biotype=protein_coding;locus_tag=PHA56_RS31905;old_locus_tag=PHA56_31900 NZ_CP116218.1 Protein Homology CDS 50188 52515 . - 0 ID=cds-WP_004199098.1;Parent=gene-PHA56_RS31905;Dbxref=Genbank:WP_004199098.1;Name=WP_004199098.1;Ontology_term=GO:0006265,GO:0003677,GO:0003917;gbkey=CDS;gene=topB;go_function=DNA binding|0003677||IEA,DNA topoisomerase type I (single strand cut%2C ATP-independent) activity|0003917||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001549937.1;locus_tag=PHA56_RS31905;product=type IA DNA topoisomerase;protein_id=WP_004199098.1;transl_table=11 NZ_CP116218.1 RefSeq gene 52519 53781 . - . ID=gene-PHA56_RS31910;Name=PHA56_RS31910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31910;old_locus_tag=PHA56_31905 NZ_CP116218.1 Protein Homology CDS 52519 53781 . - 0 ID=cds-WP_000517490.1;Parent=gene-PHA56_RS31910;Dbxref=Genbank:WP_000517490.1;Name=WP_000517490.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000517490.1;locus_tag=PHA56_RS31910;product=ATP-binding protein;protein_id=WP_000517490.1;transl_table=11 NZ_CP116218.1 RefSeq gene 53864 54358 . - . ID=gene-PHA56_RS31560;Name=PHA56_RS31560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA56_RS31560;old_locus_tag=PHA56_31560 NZ_CP116218.1 GeneMarkS-2+ CDS 53864 54358 . - 0 ID=cds-WP_001215543.1;Parent=gene-PHA56_RS31560;Dbxref=Genbank:WP_001215543.1;Name=WP_001215543.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PHA56_RS31560;product=thermonuclease family protein;protein_id=WP_001215543.1;transl_table=11 ###